>RNBP6_HUMAN (O60518) Ran-binding protein 6 (RanBP6)|
          Length = 1105

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 25/71 (35%), Positives = 37/71 (52%)
 Frame = -2

Query: 481  VLGPHSQYLPKIVSIFAEVLCNGKELATDETTTRMINVLKRFQQTLPPDFLASTFSTLQP 302
            V+GP++  LPKI+SI AE   N      D    R+ NV+++ Q +   D      S L  
Sbjct: 1035 VIGPNNSNLPKIISIIAEGKINETINYEDPCAKRLANVVRQVQTS--EDLWLECVSQLDD 1092

Query: 301  QQQLMLQSILS 269
            +QQ  LQ +L+
Sbjct: 1093 EQQEALQELLN 1103

>RNBP6_MOUSE (Q8BIV3) Ran-binding protein 6 (RanBP6) (Fragment)|
          Length = 439

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 24/71 (33%), Positives = 36/71 (50%)
 Frame = -2

Query: 481 VLGPHSQYLPKIVSIFAEVLCNGKELATDETTTRMINVLKRFQQTLPPDFLASTFSTLQP 302
           V+GP++  LPKI+SI AE   N      D    R+ NV+++ Q +   +      S L  
Sbjct: 369 VIGPNNSNLPKIISIIAEGKINETISHEDPCAKRLANVVRQIQTS--EELWLECTSQLDD 426

Query: 301 QQQLMLQSILS 269
           +QQ  L  +LS
Sbjct: 427 EQQEALHELLS 437

>IMB3_MOUSE (Q8BKC5) Importin beta-3 (Karyopherin beta-3) (Ran-binding protein 5)|
            (RanBP5)
          Length = 1097

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 23/72 (31%), Positives = 37/72 (51%)
 Frame = -2

Query: 481  VLGPHSQYLPKIVSIFAEVLCNGKELATDETTTRMINVLKRFQQTLPPDFLASTFSTLQP 302
            VLGP++  LPKI SI AE   +      D    R+ NV+++ Q +          + L P
Sbjct: 1027 VLGPNNTNLPKIFSIIAEGEMHEAIKHEDPCAKRLANVVRQVQTS--GGLWTECIAQLSP 1084

Query: 301  QQQLMLQSILST 266
            +QQ  +Q +L++
Sbjct: 1085 EQQAAIQELLNS 1096

>IMB3_HUMAN (O00410) Importin beta-3 (Karyopherin beta-3) (Ran-binding protein 5)|
            (RanBP5)
          Length = 1097

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 23/72 (31%), Positives = 37/72 (51%)
 Frame = -2

Query: 481  VLGPHSQYLPKIVSIFAEVLCNGKELATDETTTRMINVLKRFQQTLPPDFLASTFSTLQP 302
            VLGP++  LPKI SI AE   +      D    R+ NV+++ Q +          + L P
Sbjct: 1027 VLGPNNTNLPKIFSIIAEGEMHEAIKHEDPCAKRLANVVRQVQTS--GGLWTECIAQLSP 1084

Query: 301  QQQLMLQSILST 266
            +QQ  +Q +L++
Sbjct: 1085 EQQAAIQELLNS 1096

>Y229_MYCGA (P53660) Hypothetical protein MG447 homolog MYCGA2290|
          Length = 596

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -2

Query: 385 TRMINVLKRFQQTLPPDFLASTFSTLQPQQQLMLQSI 275
           T ++ + ++ Q  LPP++  S F ++ P   LMLQS+
Sbjct: 370 TNLVTITEKIQPNLPPNYYQSIFGSVTPISNLMLQSV 406

>YIF5_YEAST (P40523) Hypothetical 70.7 kDa protein in SNP1-GPP1 intergenic|
           region
          Length = 627

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 101 TIWNGDHQSLEATNACTNELPQNKIQHKKLVDSTNDEXF 217
           T  NGD ++L+A N  T    Q +I HK+L    N++ F
Sbjct: 347 TSTNGDDRALQAKNGGTITPSQTQINHKRLKHIFNEKSF 385

>MERT_STRLI (P30345) Mercuric transport protein (Mercury ion transport protein)|
          Length = 100

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -1

Query: 191 PIFCVESYSGGVHLCMHWSLQGIGG-RHSIWFLM*SVVLSCIQI*FWGLLRQRCKGNGKN 15
           PI C      G  L    +L G+GG   S W L  + VL    + +W  LR+R  GNG  
Sbjct: 28  PIICC----AGPVLLASGALAGLGGVLVSPWLLAPAAVLLAGALTWW--LRRRRTGNGDA 81

Query: 14  CC 9
           CC
Sbjct: 82  CC 83

>BIR1_YEAST (P47134) Protein BIR1|
          Length = 954

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +2

Query: 38  FDAASPKIIFEYKIILHSTSKTIWNGDHQSLEATNACTNELPQNKIQHKK--LVDSTNDE 211
           F   SP+ IF+ +   HS +    NGD++  +     T+ + +N+   +K  ++D + DE
Sbjct: 391 FKRISPRKIFDEEDSEHSLNNNSANGDNKDKDLVIDFTSHIIKNRDVGRKNAILDDSTDE 450

Query: 212 XFFEKQ 229
             F  Q
Sbjct: 451 FSFSNQ 456

>IMB3_SCHPO (O74476) Importin beta-3 subunit|
          Length = 1095

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -2

Query: 457  LPKIVSIFAEVLCNGKELATDETTTRMINVLKRFQQTLPPDFLASTFSTLQPQQQLMLQS 278
            +P I++I AE   +G  +    T TR++   K +    P D + S  +TL    Q  L +
Sbjct: 1036 MPTIITILAETFASG--VLRGRTLTRLMEASKVYLARFPADQVNSVIATLSVDNQRALSA 1093


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,236,759
Number of Sequences: 219361
Number of extensions: 1276178
Number of successful extensions: 3534
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3534
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)