Clone Information

BLAST Search Result

Clone Name	rbags20o06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Y1843_ARATH (Q9M9F9) Hypothetical protein At1g78430	37	0.056
2	MYO1_YEAST (P08964) Myosin-1 (Type II myosin)	37	0.056
3	Y1714_ARATH (Q8LE98) Hypothetical protein At1g17140	36	0.096
4	EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associate...	36	0.096
5	SMC2_YEAST (P38989) Structural maintenance of chromosome 2 (DA-b...	35	0.13
6	KTN1_CHICK (Q90631) Kinectin	35	0.13
7	CENPF_HUMAN (P49454) CENP-F kinetochore protein (Centromere prot...	35	0.16
8	CYTSA_BRARE (Q2KN93) Cytospin-A	35	0.21
9	MAD1_KLUDE (Q874L7) Spindle assembly checkpoint component MAD1 (...	34	0.28
10	RAD50_METMP (P62134) DNA double-strand break repair rad50 ATPase	34	0.28
11	EEA1_MOUSE (Q8BL66) Early endosome antigen 1	33	0.48
12	TPM_MIMNO (Q9GZ69) Tropomyosin	33	0.62
13	MYO2_SACKL (Q875Q8) Myosin-2 (Class V unconventional myosin MYO2...	33	0.81
14	MYH11_CHICK (P10587) Myosin-11 (Myosin heavy chain, gizzard smoo...	33	0.81
15	GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p2...	32	1.4
16	MYOJ_DICDI (P54697) Myosin IJ heavy chain	32	1.4
17	EXO2_BPR69 (O64299) Exonuclease subunit 2 (EC 3.1.11.-) (Protein...	32	1.4
18	MYH10_HUMAN (P35580) Myosin-10 (Myosin heavy chain, nonmuscle II...	32	1.4
19	SBCC_CLOAB (Q97FK1) Nuclease sbcCD subunit C	32	1.4
20	ROSR_RHIET (Q52741) Transcriptional regulatory protein rosR (Nod...	32	1.8
21	GGABP_RAT (Q6AY97) GGA-binding partner	32	1.8
22	GCC2_MOUSE (Q8CHG3) GRIP and coiled-coil domain-containing prote...	32	1.8
23	YAK1_SCHPO (Q09915) Hypothetical protein C1F7.01c in chromosome I	32	1.8
24	TPM2_BIOGL (P43689) Tropomyosin 2 (TMII)	31	2.4
25	KTN1_VULVU (O97961) Kinectin	31	2.4
26	TPM_HALDV (Q9GZ71) Tropomyosin	31	3.1
27	TPM_CHLNI (O02389) Tropomyosin	31	3.1
28	MYO3_CAEEL (P12844) Myosin-3 (Myosin heavy chain A) (MHC A)	30	4.0
29	SYA_THEMA (Q9X1B6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	30	4.0
30	CCD42_HUMAN (Q96M95) Coiled-coil domain-containing protein 42	30	4.0
31	LIPA_CAEEL (Q21049) Liprin-alpha (LAR-interacting protein alpha)...	30	4.0
32	RPGR1_BOVIN (Q9GLM3) X-linked retinitis pigmentosa GTPase regula...	30	4.0
33	Y328_MYCGE (Q49419) Hypothetical protein MG328	30	5.3
34	SFAS_CHLRE (Q39618) SF-assemblin	30	5.3
35	MYH9_HUMAN (P35579) Myosin-9 (Myosin heavy chain, nonmuscle IIa)...	30	5.3
36	TBCD4_HUMAN (O60343) TBC1 domain family member 4 (Akt substrate ...	30	6.9
37	TPM_HALRU (Q25145) Tropomyosin	30	6.9
38	AL2SB_RAT (Q6AY08) Amyotrophic lateral sclerosis 2 chromosomal r...	30	6.9
39	GOGA1_HUMAN (Q92805) Golgin subfamily A member 1 (Golgin-97)	30	6.9
40	M12_STRPY (P19401) M protein, serotype 12 precursor (Fragment)	29	9.0
41	MYH6_RAT (P02563) Myosin heavy chain, cardiac muscle alpha isofo...	29	9.0
42	MYH6_MESAU (P13539) Myosin heavy chain, cardiac muscle alpha iso...	29	9.0
43	GGABP_MOUSE (Q9D8L5) GGA-binding partner	29	9.0
44	Y864_MYCCT (P43047) Hypothetical protein MCAP_0864 precursor (OR...	29	9.0
45	RAD50_AQUAE (O67124) Probable DNA double-strand break repair rad...	29	9.0
46	PCDC2_PANTR (Q5DRE1) Protocadherin alpha C2 precursor (PCDH-alph...	29	9.0
47	PCDC2_HUMAN (Q9Y5I4) Protocadherin alpha C2 precursor (PCDH-alph...	29	9.0
48	NEK11_HUMAN (Q8NG66) Serine/threonine-protein kinase Nek11 (EC 2...	29	9.0
49	MYH10_MOUSE (Q61879) Myosin-10 (Myosin heavy chain, nonmuscle II...	29	9.0
50	CNN_DROME (P54623) Centrosomin (Protein arrow)	29	9.0

>Y1843_ARATH (Q9M9F9) Hypothetical protein At1g78430|
          Length = 326

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 31/129 (24%), Positives = 57/129 (44%)
 Frame = -2

Query: 585 EETFVQIKDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAE 406
           E    ++ D  A    K KN  DEL S   Q                +VL+  L++   E
Sbjct: 132 ETDVFEVLDEKAKESEKTKN--DELASKEDQ---------------INVLKARLYDLEKE 174

Query: 405 QKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREA 226
           +  L +ENE L   L+              E A K+ ++ + +EE  +E  A++++K E+
Sbjct: 175 RVSLSEENETLKDQLKKTDTEMSCAKAKEDEIASKVSQIGEELEE-SNETTAKLKKKLES 233

Query: 225 IKQLSDTID 199
           +++  +T++
Sbjct: 234 VEEAKETLE 242

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>MYO1_YEAST (P08964) Myosin-1 (Type II myosin)|
          Length = 1928

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 28/132 (21%), Positives = 60/132 (45%)
 Frame = -2

Query: 543  VSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIG 364
            ++KLKN L E+ES        L  +      E    Q++L+    ++KE L++NE L   
Sbjct: 870  INKLKNDLQEMESKKK----FLEEKNQKTVNELENTQDLLN----QEKENLRKNESLLNR 921

Query: 363  LRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNN 184
            ++                 ++I R +  + +  +E   ++Q  +E I++   T++   + 
Sbjct: 922  VKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHSK 981

Query: 183  SDDLVRYIRTHN 148
            +++L++ I   N
Sbjct: 982  NNELIKQISDLN 993

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>Y1714_ARATH (Q8LE98) Hypothetical protein At1g17140|
          Length = 344

 Score = 35.8 bits (81), Expect = 0.096
 Identities = 28/115 (24%), Positives = 54/115 (46%)
 Frame = -2

Query: 543 VSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIG 364
           V K+  + +EL S + ++      +L A   E  +L+  L++   E + L KENE L   
Sbjct: 145 VEKIAVEEEELRSGNDEA-----EKLVAKEDEIKMLKARLYDMEKEHESLGKENESLKNQ 199

Query: 363 LRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTID 199
           L            +  E   K+ R+ + +EE   +  A ++EK E++++  D ++
Sbjct: 200 LSDSASEISNVKANEDEMVSKVSRIGEELEESRAK-TAHLKEKLESMEEAKDALE 253

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>EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associated protein p162)|
            (Zinc finger FYVE domain-containing protein 2)
          Length = 1411

 Score = 35.8 bits (81), Expect = 0.096
 Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
 Frame = -2

Query: 567  IKDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKEL-- 394
            +KD  + V   LKN   E E  + +    ++     C      LQ  + N L EQKEL  
Sbjct: 858  VKDKLSKVSDSLKNSKSEFEKENQKGKAAILDLEKTCKELKHQLQVQMENTLKEQKELKK 917

Query: 393  -LKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQ 217
             L++ ++ +  L+            A  + ++  + E+ ++   +EL    ++K++ I+ 
Sbjct: 918  SLEKEKEASHQLKLELNSMQEQLIQAQNTLKQNEKEEQQLQGNINELKQSSEQKKKQIEA 977

Query: 216  L 214
            L
Sbjct: 978  L 978



 Score = 35.0 bits (79), Expect = 0.16
 Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 2/142 (1%)
 Frame = -2

Query: 594 SLLEETFVQI--KDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLH 421
           SLLE+    +  K  A    + + NQL E      + +T L  +L          Q  LH
Sbjct: 540 SLLEKEREDLYAKIQAGEGETAVLNQLQEKNHTLQEQVTQLTEKLKNQSESHKQAQENLH 599

Query: 420 NYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQ 241
           + + EQK  L+  +D  + L               ES EK+ +L+  I+ K + L +   
Sbjct: 600 DQVQEQKAHLRAAQDRVLSLE---TSVNELNSQLNESKEKVSQLDIQIKAKTELLLSAEA 656

Query: 240 EKREAIKQLSDTIDYHKNNSDD 175
            K      L + +D  +N   D
Sbjct: 657 AKTAQRADLQNHLDTAQNALQD 678

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>SMC2_YEAST (P38989) Structural maintenance of chromosome 2 (DA-box protein SMC2)|
          Length = 1170

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 31/158 (19%), Positives = 68/158 (43%), Gaps = 13/158 (8%)
 Frame = -2

Query: 594  SLLEETFVQIKDSAASVVSKLKNQLD----ELESHSSQS------ITCLIHRLSACGGEF 445
            S +E+   +      S +++LK +L     ELE   S+S         L         E 
Sbjct: 776  STIEKDMKEYDSDKGSKLNELKKELKLLAKELEEQESESERKYDLFQNLELETEQLSSEL 835

Query: 444  SVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKD 265
               + +LHN+L   + L  EN DL   +R              E  ++++ ++  + E +
Sbjct: 836  DSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELE 895

Query: 264  DELAARVQEKREA---IKQLSDTIDYHKNNSDDLVRYI 160
              +  +  EK+ +   +++L   ++ +K+N++++ + I
Sbjct: 896  TLIKKKQDEKKSSELELQKLVHDLNKYKSNTNNMEKII 933

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>KTN1_CHICK (Q90631) Kinectin|
          Length = 1364

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 21/146 (14%)
 Frame = -2

Query: 564 KDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKE 385
           +DS    V +L  Q D L +   +     +H   A     SVL   LH  +AE+ + LK+
Sbjct: 558 EDSMQLRVQELVEQNDALNAQLQK-----LHSQMAAQTSASVLAEELHKVIAEKDKQLKQ 612

Query: 384 NED---------------------LAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEK 268
            ED                     + + L+               +A ++ R++K I  K
Sbjct: 613 MEDSLGNEHANLTSKEEELKVLQNMNLSLKSEIQKLQALTNEQAAAAHELERMQKSIHIK 672

Query: 267 DDELAARVQEKREAIKQLSDTIDYHK 190
           DD++    ++ RE + Q  +T +  K
Sbjct: 673 DDKIRTLEEQLREELAQTVNTKEEFK 698

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>CENPF_HUMAN (P49454) CENP-F kinetochore protein (Centromere protein F) (Mitosin)|
            (AH antigen)
          Length = 3210

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
 Frame = -2

Query: 537  KLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLR 358
            K+K +  ELESH S+ + C    +     E      +L    ++  ELLK+   L   L+
Sbjct: 2079 KMKEKTQELESHQSECLHC----IQVAEAEVKEKTELLQTLSSDVSELLKDKTHLQEKLQ 2134

Query: 357  XXXXXXXXXXXSATESAEKIVRLEK---IIEEKDDELAARVQE 238
                       +  E   +I +L K   ++ ++ + L AR+ E
Sbjct: 2135 SLEKDSQALSLTKCELENQIAQLNKEKELLVKESESLQARLSE 2177

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>CYTSA_BRARE (Q2KN93) Cytospin-A|
          Length = 1132

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = -2

Query: 564 KDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELL-K 388
           K+ A +  SKL++ L     H+   + CL   L+    E+   Q+++   LAEQK  + K
Sbjct: 607 KEEAEAKASKLQDDL----GHARSEVACLQDTLNKLDAEYRDFQSVVQKELAEQKRAIEK 662

Query: 387 ENEDL 373
           + EDL
Sbjct: 663 QREDL 667

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>MAD1_KLUDE (Q874L7) Spindle assembly checkpoint component MAD1 (Mitotic arrest|
           deficient protein 1)
          Length = 674

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 22/103 (21%), Positives = 49/103 (47%)
 Frame = -2

Query: 453 GEFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIE 274
           G+   ++ +   Y A++ E   +NE+L + L+              E +EKI  L   ++
Sbjct: 119 GKKQEIEELSRRYEADRFEWKTQNEELDLELKSCKSLISKYEQLLMEQSEKINSLRSEVK 178

Query: 273 EKDDELAARVQEKREAIKQLSDTIDYHKNNSDDLVRYIRTHNR 145
            K+D++A     +++    +++T ++   N   L   I+TH++
Sbjct: 179 NKEDQIAELEVVRQKKDHNITNTEEF--RNLTTLKDIIKTHDQ 219

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>RAD50_METMP (P62134) DNA double-strand break repair rad50 ATPase|
          Length = 993

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 14/144 (9%)
 Frame = -2

Query: 561 DSAASVVSKLKNQLDELESHSSQSITCLIHRLSA------------CGGEFSVLQNMLHN 418
           D    ++ K+K ++ ELE    Q     IH+ +                 F  L+   ++
Sbjct: 351 DEKILILDKIKEKIKELEFIEKQIYEIKIHKKTVETLFDSVKIYDDSIKTFEELKTKKNS 410

Query: 417 YLAEQKELLKENEDLAIGLRXXXXXXXXXXXSAT--ESAEKIVRLEKIIEEKDDELAARV 244
           Y    + LLKE  DL   L+             T  E  E+ + LE  ++EK ++L+ ++
Sbjct: 411 Y----ENLLKEKFDLEKKLQNETDEKTKLISELTDFEKIEEKINLENELKEKYEDLSEKI 466

Query: 243 QEKREAIKQLSDTIDYHKNNSDDL 172
            +  E + +    I  +KN+  +L
Sbjct: 467 DKLNEIVLKKESKISEYKNSKAEL 490

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>EEA1_MOUSE (Q8BL66) Early endosome antigen 1|
          Length = 1411

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 2/134 (1%)
 Frame = -2

Query: 594 SLLEETFVQI--KDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLH 421
           SLLE+    +  K  A    + + NQL E      Q +T L  +L          +  LH
Sbjct: 540 SLLEKEREDLYAKIQAGEGETAVLNQLQEKNHALQQQLTQLTEKLKNQSESHKQAEENLH 599

Query: 420 NYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQ 241
           + + EQK  L+  +D  + L               ES EK+ +L+  I+ K + L +   
Sbjct: 600 DQVQEQKAHLRAAQDRVLSLE---TSVSELSSQLNESKEKVSQLDIQIKAKTELLLSAEA 656

Query: 240 EKREAIKQLSDTID 199
            K      L + +D
Sbjct: 657 AKAAQRADLQNHLD 670



 Score = 30.0 bits (66), Expect = 5.3
 Identities = 24/131 (18%), Positives = 48/131 (36%)
 Frame = -2

Query: 564  KDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKE 385
            K+  + V   LKN   E E  + +    ++    AC       + + H    + +  LKE
Sbjct: 859  KEKLSKVSDSLKNSKSEFEKENQKGKAAVLDLEKAC-------KELKHQLQVQAESALKE 911

Query: 384  NEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDT 205
             EDL   L                   ++ + +  +++K+ +     Q+ +  I QL  +
Sbjct: 912  QEDLKKSLEKEKETSQQLKIELNSVKGEVSQAQNTLKQKEKD----EQQLQGTINQLKQS 967

Query: 204  IDYHKNNSDDL 172
             +  K   + L
Sbjct: 968  AEQKKKQIEAL 978

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>TPM_MIMNO (Q9GZ69) Tropomyosin|
          Length = 284

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
 Frame = -2

Query: 561 DSAASVVSKLKNQLDELESH---SSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELL 391
           D AA  ++  +  L+  E+    +   +  L   L+  G     LQ  + N  A Q+E  
Sbjct: 163 DEAARKLAITEVDLERAETRLEAADAKVLELEEELTVVGANIKTLQ--VQNDQASQREDS 220

Query: 390 KENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLS 211
            E       +R            ATE+  ++V+L+K ++  +DEL A    ++E  K +S
Sbjct: 221 YEET-----IRDLTKSLKDAENRATEAERQVVKLQKEVDRLEDELLA----EKERYKAIS 271

Query: 210 DTID 199
           D +D
Sbjct: 272 DDLD 275

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>MYO2_SACKL (Q875Q8) Myosin-2 (Class V unconventional myosin MYO2) (Type V myosin|
            heavy chain MYO2) (Myosin V MYO2)
          Length = 1554

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 16/163 (9%)
 Frame = -2

Query: 594  SLLEETFVQ--IKD--SAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNM 427
            SL+ + F Q  +KD  + A  V+ LK    +LE+   Q    L  ++    G  + +Q +
Sbjct: 905  SLVRKKFAQKKLKDLKTEAKSVNHLKEVSYKLENKVIQLTESLAEKVKENKGMTARIQEL 964

Query: 426  LH--NYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEE------ 271
                N  A  KELL   +D     +              E  EK+V  +K +EE      
Sbjct: 965  QQSLNESANIKELLNSQKDEHS--KVLQQQKDAHDVQFNEVQEKLVNAKKEVEEAKEEIE 1022

Query: 270  ----KDDELAARVQEKREAIKQLSDTIDYHKNNSDDLVRYIRT 154
                K DEL A V+ K E + +   T    +  + DL   +++
Sbjct: 1023 QLIAKQDELKAEVRTKIEELNKAKKTFTEFQTQNSDLKNEVKS 1065

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>MYH11_CHICK (P10587) Myosin-11 (Myosin heavy chain, gizzard smooth muscle)|
          Length = 1978

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 11/150 (7%)
 Frame = -2

Query: 588  LEETFVQIKDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLA 409
            L+    ++K   A    +L+  L  LE  +SQ    L  ++       S LQ  L +  A
Sbjct: 1079 LQAQIAELKAQLAKKEEELQAALARLEDETSQKNNAL-KKIRELESHISDLQEDLESEKA 1137

Query: 408  -------EQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAA 250
                   ++++L +E E L   L               +  +++  L++ +EE+     A
Sbjct: 1138 ARNKAEKQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEA 1197

Query: 249  RVQEKR----EAIKQLSDTIDYHKNNSDDL 172
            +VQE R    +A+++L++ ++  K    +L
Sbjct: 1198 QVQEMRQKHTQAVEELTEQLEQFKRAKANL 1227

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>GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p230) (256 kDa|
            golgin) (Golgin-245) (Protein 72.1)
          Length = 2230

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 25/172 (14%)
 Frame = -2

Query: 588  LEETFVQIKDSAASVVSKLKNQLDELESHSSQSITCLI--HRLSACGGEFSVLQ--NMLH 421
            LEE    +KD    +  +L+ ++DE ++H  Q +  +I  H +S    E ++    N L 
Sbjct: 703  LEEELSVLKDQTDKMKQELEAKMDEQKNHHQQQVDSIIKEHEVSIQRTEKALKDQINQLE 762

Query: 420  NYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSAT---------ESA---------EKIV 295
              L E+ + LKE++     L             A+         +SA         E++ 
Sbjct: 763  LLLKERDKHLKEHQAHVENLEADIKRSEGELQQASAKLDVFQSYQSATHEQTKAYEEQLA 822

Query: 294  RLEKIIEEKDDE---LAARVQEKREAIKQLSDTIDYHKNNSDDLVRYIRTHN 148
            +L++ + + + E   L  +V E     K +   +D HK    DL++ +   N
Sbjct: 823  QLQQKLLDLETERILLTKQVAEVEAQKKDVCTELDAHKIQVQDLMQQLEKQN 874

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>MYOJ_DICDI (P54697) Myosin IJ heavy chain|
          Length = 2245

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 21/77 (27%), Positives = 37/77 (48%)
 Frame = -2

Query: 414  LAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEK 235
            L  ++E  K+   L + L               +S EKI +L+  +EE  DE   ++Q++
Sbjct: 1227 LGSEEEAKKQINQLELELTDHKSKLQIQLQLTEQSNEKIKKLKGKLEEYQDE-KKQLQQE 1285

Query: 234  REAIKQLSDTIDYHKNN 184
             E IKQ   +++  KN+
Sbjct: 1286 LERIKQSKQSVEDEKNS 1302

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>EXO2_BPR69 (O64299) Exonuclease subunit 2 (EC 3.1.11.-) (Protein Gp46)|
           (Fragment)
          Length = 558

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
 Frame = -2

Query: 546 VVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAI 367
           +VSK+ ++L E  +HS + +TC  HR        SVL +       E +  +K  +DLA 
Sbjct: 297 IVSKITDKLHEC-NHSFEQLTC--HR-----DNLSVLVD-------EYRANVKTKQDLAS 341

Query: 366 GLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTI--DYH 193
            +R            A +    I +      +  DE+A   +E  + IK  SD +   YH
Sbjct: 342 DIRTKKQAMIATIDKAKKVKAAIEQASAEFIDHADEIALLQKELDKIIKTKSDIVLEKYH 401

Query: 192 KNNSDDLVR 166
           +    D+++
Sbjct: 402 RGIITDMLK 410

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>MYH10_HUMAN (P35580) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle|
            myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)
            (Cellular myosin heavy chain, type B) (Nonmuscle myosin
            heavy chain-B) (NMMHC-B)
          Length = 1976

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 29/138 (21%), Positives = 59/138 (42%)
 Frame = -2

Query: 585  EETFVQIKDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAE 406
            E+  ++    AAS+ S+L++  + L+  + Q +      LS+   +    +N L     E
Sbjct: 1300 EKKGIKFAKDAASLESQLQDTQELLQEETRQKLN-----LSSRIRQLEEEKNSLQEQQEE 1354

Query: 405  QKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREA 226
            ++E  K  E   + L+               + E +   +K + +  + L+ R++EK  A
Sbjct: 1355 EEEARKNLEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEALSQRLEEKALA 1414

Query: 225  IKQLSDTIDYHKNNSDDL 172
              +L  T +  +   DDL
Sbjct: 1415 YDKLEKTKNRLQQELDDL 1432

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>SBCC_CLOAB (Q97FK1) Nuclease sbcCD subunit C|
          Length = 1163

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
 Frame = -2

Query: 519 DELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXX 340
           DEL    ++ I     + +   GE    +N+  + L E++ELLKEN D            
Sbjct: 179 DELSFKLARKIRKEREKENVLVGELKGYENINEDVLKERRELLKENNDFFNEASKEYLKA 238

Query: 339 XXXXXSATE------SAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSD 178
                   E        E+  R+ K + EK DE+   ++EKR  + + S  +  + +N +
Sbjct: 239 EEEYNEGKEVWGLQIEIEEKNRVRKDLMEKKDEI--DLKEKRARLGESSSKVKPYIDNYE 296

Query: 177 DLVRYI 160
           + ++ I
Sbjct: 297 NTLKQI 302

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>ROSR_RHIET (Q52741) Transcriptional regulatory protein rosR (Nodulation|
           competitiveness determinant)
          Length = 143

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = -2

Query: 567 IKDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLK 388
           +   AA+VV K K  +   +S   + ITCL      CGG F  L+  L  + +   E  +
Sbjct: 51  VPQPAAAVVEKQKPAVSVRKSVQDEQITCL-----ECGGNFKSLKRHLMTHHSLSPEEYR 105

Query: 387 ENEDL 373
           E  DL
Sbjct: 106 EKWDL 110

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>GGABP_RAT (Q6AY97) GGA-binding partner|
          Length = 442

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 6/130 (4%)
 Frame = -2

Query: 585 EETFVQIKDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAE 406
           E   + + +  A + S +K QLD +E     +I    HR   C          L   L  
Sbjct: 209 EALSIIVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHR---CEELLHAQHQRLLEVLDT 265

Query: 405 QKELLKENEDLAIGLRXXXXXXX------XXXXSATESAEKIVRLEKIIEEKDDELAARV 244
           +KELLKE    A+  +                    E+ E  V+LEK  E   D +   V
Sbjct: 266 EKELLKEKIQEALTQQSQEQKETLGKCLQEEMQKNKETLESAVKLEK--EAMKDVITKAV 323

Query: 243 QEKREAIKQL 214
           +E+RE ++++
Sbjct: 324 EEERENLEKV 333

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>GCC2_MOUSE (Q8CHG3) GRIP and coiled-coil domain-containing protein 2 (Golgi|
           coiled coil protein GCC185)
          Length = 1679

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 7/152 (4%)
 Frame = -2

Query: 588 LEETFVQIKDSAASVVSKL---KNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHN 418
           LEET  + + S  + V ++   KN+L  + S  S+    L   L     +   L+  L +
Sbjct: 112 LEETHKEFEQSHRNYVKEIESCKNELMAVHSEHSKETAILQKELEEAVHKQVELREQLKS 171

Query: 417 YLAEQKELLKENEDL----AIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAA 250
               +  + K  E++    A               ++ E  ++I+ L+K+IE+K      
Sbjct: 172 QSDSEDNVRKLQEEIQNITAAFEEQISCLEKKLEATSDEKQQEIIHLQKVIEDKAQHYQK 231

Query: 249 RVQEKREAIKQLSDTIDYHKNNSDDLVRYIRT 154
            +   +  I QL  T   HK    +L+  I T
Sbjct: 232 DINTFQAEILQLRAT---HKEEVTELMSQIET 260

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>YAK1_SCHPO (Q09915) Hypothetical protein C1F7.01c in chromosome I|
          Length = 1365

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = -2

Query: 315 ESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSDDL 172
           E AE+ VR   I+E+++DE+   ++ K++  K    T D    + +DL
Sbjct: 62  EEAERQVREGFIVEDEEDEVPQEIRRKKKRKKHAESTADQDMLDEEDL 109

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>TPM2_BIOGL (P43689) Tropomyosin 2 (TMII)|
          Length = 284

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 19/84 (22%), Positives = 38/84 (45%)
 Frame = -2

Query: 450 EFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEE 271
           E  V+ N + +    ++E  +  +     +R            ATE+   + +L+K ++ 
Sbjct: 196 ELKVVGNNMKSLEISEQEASQREDSYEETIRDLTQRLKDAENRATEAERTVSKLQKEVDR 255

Query: 270 KDDELAARVQEKREAIKQLSDTID 199
            +DEL A    ++E  K +SD +D
Sbjct: 256 LEDELLA----EKERYKSISDELD 275

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>KTN1_VULVU (O97961) Kinectin|
          Length = 1330

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 33/160 (20%)
 Frame = -2

Query: 588  LEETFVQIKDSAASVVSK---LKNQLDEL--ESHSSQSITCLIHRLSACGGEFSVLQNML 424
            LE+  +Q+ +S    V+K   L+ Q+ ++  ++ + +++    H   A     SVL   L
Sbjct: 546  LEQRLMQLMESEQKRVTKEESLQMQVQDILEQNEALKALIQQFHSQIAAQTSASVLAEEL 605

Query: 423  HNYLAEQKELLKENED---------------------LAIGLRXXXXXXXXXXXSATESA 307
            H  +AE+ + +K+ ED                     +   L+               +A
Sbjct: 606  HKVIAEKDKQIKQTEDSLANEHDHLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAA 665

Query: 306  EKIVRLEKIIEEKDD-------ELAARVQEKREAIKQLSD 208
             ++ +++K I  KDD       +L   +  K E  K L+D
Sbjct: 666  HELEKMQKSIHVKDDQIRLLEEQLQCEISNKMEEFKILND 705

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>TPM_HALDV (Q9GZ71) Tropomyosin|
          Length = 284

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/84 (22%), Positives = 38/84 (45%)
 Frame = -2

Query: 450 EFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEE 271
           E  V+ N + +    ++E  +  +     +R            ATE+   + +L+K ++ 
Sbjct: 196 ELKVVGNNMKSLEISEQEASQREDSYEETIRDLTQRLKDAENRATEAERTVSKLQKEVDR 255

Query: 270 KDDELAARVQEKREAIKQLSDTID 199
            +DEL A    ++E  K +SD +D
Sbjct: 256 LEDELLA----EKEKYKAISDELD 275

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>TPM_CHLNI (O02389) Tropomyosin|
          Length = 284

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
 Frame = -2

Query: 561 DSAASVVSKLKNQLDELESH---SSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELL 391
           D AA  ++  +  L+  E+    +   +  L   L+  G     LQ  + N  A Q+E  
Sbjct: 163 DEAARKLAITEVDLERAETRLEAADAKVHELEEELTVVGANIKTLQ--VQNDQASQREDS 220

Query: 390 KENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLS 211
            E       +R            ATE+  ++ +L+K ++  +DEL A    ++E  K +S
Sbjct: 221 YEET-----IRDLSKNLKDAETRATEAERQLTKLQKEVDRLEDELLA----EKERYKAIS 271

Query: 210 DTID 199
           D +D
Sbjct: 272 DELD 275

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>MYO3_CAEEL (P12844) Myosin-3 (Myosin heavy chain A) (MHC A)|
          Length = 1969

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/111 (18%), Positives = 47/111 (42%)
 Frame = -2

Query: 498  SQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSA 319
            +Q +  L  +L   G   + LQ ++     E++EL K  ++    L              
Sbjct: 1519 AQEVKDLTDQLGEGGRSVAELQKIVRKLEVEKEELQKALDEAEAALEAEEAKVLRAQIEV 1578

Query: 318  TESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSDDLVR 166
            ++   +I   EK I+EK++E     +  + A++ +  T++      ++ +R
Sbjct: 1579 SQIRSEI---EKRIQEKEEEFENTRRNHQRALESMQATLEAETKQKEEALR 1626

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>SYA_THEMA (Q9X1B6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 863

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = -2

Query: 501 SSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXS 322
           S +S++  + R+ A  G FS L+      L  QK+L+ + +++ +G R            
Sbjct: 681 SEESVSSGVRRIEAVTG-FSALE-----LLRNQKKLIDQLKEI-LGARED---------- 723

Query: 321 ATESAEKIVRLEKIIEEKDDELA-ARVQEKREAIKQLSDTI 202
             E  ++++ L + ++E + +L+  R+ E+R A+KQL D +
Sbjct: 724 --ELTDRVLSLREKVKELEKKLSQGRISEERIAMKQLEDGV 762

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>CCD42_HUMAN (Q96M95) Coiled-coil domain-containing protein 42|
          Length = 316

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 34/127 (26%), Positives = 47/127 (37%), Gaps = 12/127 (9%)
 Frame = -2

Query: 582 ETFVQIKDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQ 403
           E F+Q  D       K  N+  EL+    Q +T     + A   E   L   L +Y    
Sbjct: 94  EQFIQENDQKRIRAMKKANKERELKCQHMQELTKRKQEMVALRLEHQRLSAKLKDYYIFN 153

Query: 402 KELLK--------ENEDLAIGLRXXXXXXXXXXXSATESAEKI----VRLEKIIEEKDDE 259
           K L K        E  ++    +           SA E  EKI     RL + +EEKDDE
Sbjct: 154 KYLEKVVENSEFEEIHEVIARYKTLVSMRHDLMQSAQEGQEKIERAKARLARYMEEKDDE 213

Query: 258 LAARVQE 238
           +  +  E
Sbjct: 214 ILQQNNE 220

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>LIPA_CAEEL (Q21049) Liprin-alpha (LAR-interacting protein alpha) (Synapse|
           defective protein 2)
          Length = 1139

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/89 (22%), Positives = 39/89 (43%)
 Frame = -2

Query: 495 QSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSAT 316
           + +  L   LS  G E S L+  +  Y AE +E +  N  +                 ++
Sbjct: 190 ERVATLEEELSTKGDENSSLKARIATYAAEAEEAMASNAPI-------------NGSISS 236

Query: 315 ESAEKIVRLEKIIEEKDDELAARVQEKRE 229
           ESA +++ +++ +E    ELA  +++  E
Sbjct: 237 ESANRLIEMQEALERMKTELANSLKQSTE 265

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>RPGR1_BOVIN (Q9GLM3) X-linked retinitis pigmentosa GTPase regulator-interacting|
           protein 1 (RPGR-interacting protein 1)
          Length = 1221

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 27/135 (20%), Positives = 60/135 (44%)
 Frame = -2

Query: 549 SVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLA 370
           +++S++     EL+  S ++++     L +   + S+LQ  L  +    ++L KE + L 
Sbjct: 273 ALLSQVNELRAELKEESKKAVS-----LKSQMEDVSILQITLKEFQERVEDLEKERKLLN 327

Query: 369 IGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHK 190
                              S E   +L++ + +  D+L   ++EKRE + QLS     +K
Sbjct: 328 DNYDKLLESMLDSSNQPQWSHELGEQLQQKVSQLQDQLDVEMKEKREILLQLSQEKAQNK 387

Query: 189 NNSDDLVRYIRTHNR 145
           +   ++   ++ H +
Sbjct: 388 DLELEVTSLLQKHKQ 402

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>Y328_MYCGE (Q49419) Hypothetical protein MG328|
          Length = 756

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 31/121 (25%), Positives = 52/121 (42%)
 Frame = -2

Query: 534 LKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGLRX 355
           LK Q+D+L+ +++  I  L   +       S  ++   +    Q +LL+EN DL   L+ 
Sbjct: 251 LKKQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQ- 309

Query: 354 XXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSDD 175
                            K V +  + +E ++EL    QEK      LSD +D  KN S +
Sbjct: 310 ----------------NKPVAINPLSDEVNEELENLKQEKA----LLSDQLDALKNKSSN 349

Query: 174 L 172
           +
Sbjct: 350 V 350

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>SFAS_CHLRE (Q39618) SF-assemblin|
          Length = 276

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 7/153 (4%)
 Frame = -2

Query: 594 SLLEETFVQIKDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNY 415
           SLL+E+  +I+ S  + V +      +L+SH    I  L  R      +F+ LQ  L + 
Sbjct: 66  SLLQESLQRIEKSVEAEVKRRAESDKQLQSHFEGEIKTLQERQLQ---QFTDLQLALKSA 122

Query: 414 LAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEK 235
           +    + + +   L    R           ++      + ++ + +   D+E   RVQE+
Sbjct: 123 VESLNQRITDLHALVRDERESRRSDIEHLATSL-----VGKVNECVAAIDEERNGRVQEQ 177

Query: 234 REAIKQ-------LSDTIDYHKNNSDDLVRYIR 157
             ++K+       LS  +D  KN  D  V  +R
Sbjct: 178 TVSMKRVGEDLMLLSQRLDTEKNTRDSEVSALR 210

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>MYH9_HUMAN (P35579) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle|
            myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA)
            (Cellular myosin heavy chain, type A) (Nonmuscle myosin
            heavy chain-A) (NMMHC-A)
          Length = 1959

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 32/161 (19%), Positives = 70/161 (43%), Gaps = 11/161 (6%)
 Frame = -2

Query: 588  LEETFVQIKDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLA 409
            L+    ++K   A    +L+  L  +E  ++Q    L  ++     + S LQ  L +  A
Sbjct: 1066 LQAQIAELKMQLAKKEEELQAALARVEEEAAQKNMAL-KKIRELESQISELQEDLESERA 1124

Query: 408  -------EQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAA 250
                   ++++L +E E L   L              ++  +++  L+K +EE+     A
Sbjct: 1125 SRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQELRSKREQEVNILKKTLEEEAKTHEA 1184

Query: 249  RVQEKR----EAIKQLSDTIDYHKNNSDDLVRYIRTHNRPR 139
            ++QE R    +A+++L++ ++  K    +L +  +T    R
Sbjct: 1185 QIQEMRQKHSQAVEELAEQLEQTKRVKANLEKAKQTLENER 1225

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>TBCD4_HUMAN (O60343) TBC1 domain family member 4 (Akt substrate of 160 kDa)|
            (AS160)
          Length = 1298

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 26/152 (17%), Positives = 59/152 (38%)
 Frame = -2

Query: 585  EETFVQIKDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAE 406
            +ET +   +S  ++V  LKN L ++ +   + I   +  +         +   LH Y  E
Sbjct: 1127 QETLIMECESFENIVEFLKNTLPDMNTSEMEKIITQVFEMD--------ISKQLHAYEVE 1178

Query: 405  QKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREA 226
               L  E ++ +                 +E+ EK+ R    ++ ++ +L  ++Q     
Sbjct: 1179 YHVLQDELQESSYSCED------------SETLEKLERANSQLKRQNMDLLEKLQVAHTK 1226

Query: 225  IKQLSDTIDYHKNNSDDLVRYIRTHNRPRLPF 130
            I+ L   ++        +   IRT  + ++ +
Sbjct: 1227 IQALESNLENLLTRETKMKSLIRTLEQEKMAY 1258

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>TPM_HALRU (Q25145) Tropomyosin|
          Length = 284

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 19/84 (22%), Positives = 37/84 (44%)
 Frame = -2

Query: 450 EFSVLQNMLHNYLAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEE 271
           E  V+ N   +    ++E  +  +     +R            ATE+   + +L+K ++ 
Sbjct: 196 ELKVVGNNTKSLEISEQEASQREDSYEETIRDLTQRLKDAENRATEAERTVSKLQKEVDR 255

Query: 270 KDDELAARVQEKREAIKQLSDTID 199
            +DEL A    ++E  K +SD +D
Sbjct: 256 LEDELLA----EKEKYKAISDELD 275

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>AL2SB_RAT (Q6AY08) Amyotrophic lateral sclerosis 2 chromosomal region|
           candidate gene 12 protein homolog
          Length = 411

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 9/131 (6%)
 Frame = -2

Query: 531 KNQLDELESHSSQSI----TCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIG 364
           K QL++LE+   +++         +L   G E+  L+NM H Y   Q  +  E ED    
Sbjct: 182 KEQLEKLENSYKETLKVEKAAAQEKLDEMGKEYKYLKNMFHMY---QDSIYDEMED---- 234

Query: 363 LRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARV-----QEKREAIKQLSDTID 199
                        +  E  EK+ R EKI+ ++   +  +      +EKR+  +  S  ++
Sbjct: 235 -------KWSRRKAEWEKDEKMER-EKILLQQKHRITKKFELESEEEKRKMNESFSTVME 286

Query: 198 YHKNNSDDLVR 166
                 ++L+R
Sbjct: 287 NFTREKEELIR 297

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>GOGA1_HUMAN (Q92805) Golgin subfamily A member 1 (Golgin-97)|
          Length = 767

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
 Frame = -2

Query: 540 SKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAEQKELLKENEDLAIGL 361
           S L  +L+EL+ H S       H +++  G  S +  +      +++EL    + L+I L
Sbjct: 224 SDLSQKLEELQRHYSTLEEQRDHVIASKTGAESKITALEQ----KEQELQALIQQLSIDL 279

Query: 360 RXXXXXXXXXXXSATESAEKIVRLEKIIEEK---DDELAARVQEKREAIKQLSDT 205
           +             T   EK+  LEK +E+    ++ +   ++EK  A + L DT
Sbjct: 280 QKVTAETQEKEDVITHLQEKVASLEKRLEQNLSGEEHVQELLKEKTLAEQNLEDT 334

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>M12_STRPY (P19401) M protein, serotype 12 precursor (Fragment)|
          Length = 564

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = -2

Query: 303 KIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSDDLVRY 163
           KI  LEK +EEK+D L+   +E  EA K +    + H   + DL+R+
Sbjct: 127 KITELEKSVEEKNDVLSQIKKELEEAEKDIQFGREVH---AADLLRH 170

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>MYH6_RAT (P02563) Myosin heavy chain, cardiac muscle alpha isoform|
            (MyHC-alpha)
          Length = 1938

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 14/152 (9%)
 Frame = -2

Query: 585  EETFVQIKDSAASVVSKLKNQ------LDELESHSSQSITCLIHRLS-----ACGGEFSV 439
            EE   +    AA +  +LK +      L+ ++ +  Q+I  L HRL      A  G    
Sbjct: 1753 EEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQ 1812

Query: 438  LQNMLHNYLAEQKEL---LKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEK 268
            LQ +       + EL    K N +   G+R              E  + +VRL+ ++++ 
Sbjct: 1813 LQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEEDKKNLVRLQDLVDKL 1872

Query: 267  DDELAARVQEKREAIKQLSDTIDYHKNNSDDL 172
              ++ A  ++  EA +Q +  +   +    +L
Sbjct: 1873 QLKVKAYKRQAEEAEEQANTNLSKFRKVQHEL 1904

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>MYH6_MESAU (P13539) Myosin heavy chain, cardiac muscle alpha isoform|
            (MyHC-alpha)
          Length = 1939

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 14/152 (9%)
 Frame = -2

Query: 585  EETFVQIKDSAASVVSKLKNQ------LDELESHSSQSITCLIHRLS-----ACGGEFSV 439
            EE   +    AA +  +LK +      L+ ++ +  Q+I  L HRL      A  G    
Sbjct: 1754 EEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQ 1813

Query: 438  LQNMLHNYLAEQKEL---LKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEK 268
            LQ +       + EL    K N +   G+R              E  + +VRL+ ++++ 
Sbjct: 1814 LQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEEDKKNLVRLQDLVDKL 1873

Query: 267  DDELAARVQEKREAIKQLSDTIDYHKNNSDDL 172
              ++ A  ++  EA +Q +  +   +    +L
Sbjct: 1874 QLKVKAYKRQAEEAEEQANTNLSKFRKVQHEL 1905

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>GGABP_MOUSE (Q9D8L5) GGA-binding partner|
          Length = 442

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 4/128 (3%)
 Frame = -2

Query: 585 EETFVQIKDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAE 406
           E   + + +  A + S +K QLD +E     +I    HR   C          L + L  
Sbjct: 209 EALSIIVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHR---CEELLHAQHQRLLDVLDT 265

Query: 405 QKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEK----DDELAARVQE 238
           +KELL+E    A+                 +S E+   LEK ++E+     + L + V+ 
Sbjct: 266 EKELLREKIQEAL---------------TQQSQEQKESLEKCLQEEMQRNKETLESAVKL 310

Query: 237 KREAIKQL 214
           ++EA+K +
Sbjct: 311 EKEAMKDV 318

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>Y864_MYCCT (P43047) Hypothetical protein MCAP_0864 precursor (ORF R8)|
          Length = 470

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
 Frame = -2

Query: 549 SVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLH----NYLAEQKELLKEN 382
           S ++K+  Q+++LE+ S+Q+ T     +S    +   L         N    +KEL K+N
Sbjct: 316 SDITKINEQVNQLETQSNQTNT----NISLLRQQIQKLDKQKETSTLNTQTLEKELNKKN 371

Query: 381 EDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTI 202
            +L   ++             +E  +   +L++II++          +K E IKQL   +
Sbjct: 372 IELEKLIKESESYSTSIKKLESERTQLQTKLDEIIKQNT--------QKEELIKQLEKEL 423

Query: 201 D 199
           +
Sbjct: 424 E 424

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>RAD50_AQUAE (O67124) Probable DNA double-strand break repair rad50 ATPase|
          Length = 978

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = -2

Query: 414 LAEQKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEK 235
           L E KE+LKE   L+  L+              + +E++        EK  +L A  +EK
Sbjct: 345 LQEIKEILKELSQLSSSLKEKEREYEQAKQEFEDLSERV--------EKGKKLVAETEEK 396

Query: 234 REAIKQLSDTIDY 196
            E IK+L    +Y
Sbjct: 397 LEKIKELFSEEEY 409

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>PCDC2_PANTR (Q5DRE1) Protocadherin alpha C2 precursor (PCDH-alpha-C2)|
          Length = 1007

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 515 SSNHTPAKALRASFTAYLLVVESLVSFRTCYTIILLSRKNCSRKT 381
           +  H  +    +  T YL++  S VSF    TII+LS   C R T
Sbjct: 691 TQRHVKSPRTYSEITLYLIIALSTVSFIFLLTIIILSIIKCYRYT 735

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>PCDC2_HUMAN (Q9Y5I4) Protocadherin alpha C2 precursor (PCDH-alpha-C2)|
          Length = 1007

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 515 SSNHTPAKALRASFTAYLLVVESLVSFRTCYTIILLSRKNCSRKT 381
           +  H  +    +  T YL++  S VSF    TII+LS   C R T
Sbjct: 691 TQRHVKSPRTYSEITLYLIIALSTVSFIFLLTIIILSIIKCYRYT 735

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>NEK11_HUMAN (Q8NG66) Serine/threonine-protein kinase Nek11 (EC 2.7.11.1)|
           (NimA-related protein kinase 11) (Never in mitosis
           A-related kinase 11)
          Length = 645

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -2

Query: 306 EKIVRLEKIIEEKDDELAARVQEKREA-IKQLSDTIDYHKNN 184
           EK  +L+KI+EEK +E + R+QE R    +QLS  + + K +
Sbjct: 355 EKARKLKKIVEEKYEENSKRMQELRSRNFQQLSVDVLHEKTH 396

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>MYH10_MOUSE (Q61879) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle|
            myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)
            (Cellular myosin heavy chain, type B) (Nonmuscle myosin
            heavy chain-B) (NMMHC-B)
          Length = 1976

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 28/138 (20%), Positives = 58/138 (42%)
 Frame = -2

Query: 585  EETFVQIKDSAASVVSKLKNQLDELESHSSQSITCLIHRLSACGGEFSVLQNMLHNYLAE 406
            E+  ++    AA + S+L++  + L+  + Q +      LS+   +    +N L     E
Sbjct: 1300 EKKGIKFAKDAAGLESQLQDTQELLQEETRQKLN-----LSSRIRQLEEEKNSLQEQQEE 1354

Query: 405  QKELLKENEDLAIGLRXXXXXXXXXXXSATESAEKIVRLEKIIEEKDDELAARVQEKREA 226
            ++E  K  E   + L+               + E +   +K + +  + L+ R++EK  A
Sbjct: 1355 EEEARKNLEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDVEALSQRLEEKVLA 1414

Query: 225  IKQLSDTIDYHKNNSDDL 172
              +L  T +  +   DDL
Sbjct: 1415 YDKLEKTKNRLQQELDDL 1432

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>CNN_DROME (P54623) Centrosomin (Protein arrow)|
          Length = 1320

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -2

Query: 321  ATESAEKIVRLEKIIEEKDDELAARVQEKREAIKQLSDTIDYHKNNSDDL 172
            A +  E+  RL +   E+D       QE+ + + +L  ++DYH+ N  +L
Sbjct: 1030 AVQQLEEHERLHREALERDWVALTTYQEQAQQLLELQRSLDYHQENEKEL 1079


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,651,276
Number of Sequences: 219361
Number of extensions: 986246
Number of successful extensions: 3794
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 3585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3783
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result