>HLAE_HUMAN (P13747) HLA class I histocompatibility antigen, alpha chain E|
           precursor (MHC class I antigen E)
          Length = 358

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -3

Query: 286 WALGFFQLQMMLTGQQDK*CATQDAE 209
           WALGF+  ++ LT QQD    TQD E
Sbjct: 225 WALGFYPAEITLTWQQDGEGHTQDTE 250

>HLAE_PANTR (Q95IT3) HLA class I histocompatibility antigen, alpha chain E|
           precursor (MHC class I antigen E)
          Length = 350

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -3

Query: 286 WALGFFQLQMMLTGQQDK*CATQDAE 209
           WALGF+  ++ LT QQD    TQD E
Sbjct: 225 WALGFYPAEITLTWQQDGEGHTQDTE 250

>PUB2_SCHPO (Q9UTG2) E3 ubiquitin--protein ligase pub2 (EC 6.3.2.-)|
          Length = 671

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 357 GAQMSLEWDHHGYFLQFSTATRTWPSSPVD 446
           G +M L  D+H YF+  ST T TW S P D
Sbjct: 247 GWEMRLSEDYHVYFVDHSTKTTTW-SDPRD 275

>HLAG_PANTR (Q95IT1) HLA class I histocompatibility antigen, alpha chain G|
           precursor (HLA G antigen)
          Length = 338

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 286 WALGFFQLQMMLTGQQDK*CATQDAE 209
           WALGF+  +++LT Q+D    TQD E
Sbjct: 228 WALGFYPAEIILTWQRDGEDQTQDVE 253

>HLAG_HUMAN (P17693) HLA class I histocompatibility antigen, alpha chain G|
           precursor (HLA G antigen)
          Length = 338

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 286 WALGFFQLQMMLTGQQDK*CATQDAE 209
           WALGF+  +++LT Q+D    TQD E
Sbjct: 228 WALGFYPAEIILTWQRDGEDQTQDVE 253

>RGMA_CHICK (Q8JG54) Repulsive guidance molecule A precursor|
          Length = 432

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 286 TLMTATDILLLFKLLFPPVCTNCKALKC 369
           T +    IL +F  +FPPV + CK LKC
Sbjct: 8   TALGLFQILPVFLCIFPPVTSPCKILKC 35

>LPXK_CAUCR (P58184) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A|
           4'-kinase)
          Length = 335

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -1

Query: 534 ESPVTRLALAT*SQPVVAAVVHQPLRGFTNQLDSRARSSSLSKTARNIHDDPTLRTFE-R 358
           ++P+ R  L T +Q  VAA  H   RG+  +L    R  ++  TA ++ D+P +   +  
Sbjct: 64  KTPIVRELLLTLTQRGVAA--HGLSRGYGGKLKGPVRVDTIRHTAADVGDEPLMLAQDFP 121

Query: 357 LTISADR 337
           + I+ADR
Sbjct: 122 MWIAADR 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,128,727
Number of Sequences: 219361
Number of extensions: 1865622
Number of successful extensions: 4033
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4033
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)