ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags21c22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY112454.1| Zea mays CL1239_1 mRNA sequence Length = 950 Score = 587 bits (296), Expect = e-164 Identities = 419/460 (91%) Strand = Plus / Minus Query: 203 tgtgacgtcttgtcgtgatcgttctcgagctggctgaaatttcccttctctttgatcagc 262 ||||| ||||| ||||| || ||||| ||||||||||| || |||||||| ||||||||| Sbjct: 625 tgtgatgtcttctcgtggtcattctcaagctggctgaagttccccttctccttgatcagc 566 Query: 263 tgggtgtggtggtgcttgcagaagagcttgccctcgtgggcgatgtaattcgaagggctg 322 ||| ||||||||||||||||| | ||||| |||||||| || ||||| || ||||||||| Sbjct: 565 tggatgtggtggtgcttgcagtacagcttcccctcgtgcgcaatgtagttagaagggctg 506 Query: 323 atggtgcaccctccatggcagcatttgaagcagctcttgtggtacatggtgttattgaca 382 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| Sbjct: 505 atggtgcaccctccatggcagcacttgaagcagctcttgtggtacatagtgttattaaca 446 Query: 383 gtaaccctctcaattggatagactgtcttgctgcatccaaaacatttctctctggtgcca 442 || ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 445 gtgaccctctcagttggatagactgtcttgctgcatccaacacatttctctctggtgcca 386 Query: 443 gcaaatgcgctcgagactttaatagcattctcattcccaacattcctttctggcttgaca 502 ||||| ||||| ||||||||| ||||||||||||||||||| || ||||||||||||||| Sbjct: 385 gcaaaggcgcttgagactttagtagcattctcattcccaacgtttctttctggcttgaca 326 Query: 503 acctttggagtcccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtca 562 ||||| ||||| ||||||||||||||||| | |||||| ||||||||||| |||||||| Sbjct: 325 accttgggagttccttcgaagctcttgtccaagctccctgtcctcttgaacagctggtcg 266 Query: 563 aagtgaggcctgcagtagagcaccccttcgaacgagttgtaattcgcgagcttgagggtg 622 ||||||||||||||||||||||| || ||||| |||||||| || ||||||||||||||| Sbjct: 265 aagtgaggcctgcagtagagcactccctcgaaggagttgtagttggcgagcttgagggtg 206 Query: 623 cccttgcagtggtggcacctgaagcaggccttgtggtaga 662 ||||||||||||||||| | |||||||||||||||||||| Sbjct: 205 cccttgcagtggtggcagcggaagcaggccttgtggtaga 166
>gb|AF135591.1|AF135591 Zea mays LIM transcription factor homolog (lim1) mRNA, complete cds Length = 930 Score = 563 bits (284), Expect = e-157 Identities = 417/460 (90%), Gaps = 1/460 (0%) Strand = Plus / Minus Query: 203 tgtgacgtcttgtcgtgatcgttctcgagctggctgaaatttcccttctctttgatcagc 262 ||||| ||||| ||||| || ||||| ||||||||||| || ||||| || ||||||||| Sbjct: 604 tgtgatgtcttctcgtggtcattctcaagctggctgaagttcccctt-tccttgatcagc 546 Query: 263 tgggtgtggtggtgcttgcagaagagcttgccctcgtgggcgatgtaattcgaagggctg 322 ||| ||||||||||||||||| | ||||| |||||||| || ||||| || ||||||||| Sbjct: 545 tggatgtggtggtgcttgcagtacagcttcccctcgtgcgcaatgtagttagaagggctg 486 Query: 323 atggtgcaccctccatggcagcatttgaagcagctcttgtggtacatggtgttattgaca 382 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| || ||| Sbjct: 485 atggtgcaccctccatggcagcacttgaagcagctcttgtggtacatagtgttgttaaca 426 Query: 383 gtaaccctctcaattggatagactgtcttgctgcatccaaaacatttctctctggtgcca 442 || ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 425 gtgaccctctcagttggatagactgtcttgctgcatccaacacatttctctctggtgcca 366 Query: 443 gcaaatgcgctcgagactttaatagcattctcattcccaacattcctttctggcttgaca 502 ||||| ||||| ||||||||| ||||||||||||||||||| || ||||||||||||||| Sbjct: 365 gcaaaggcgcttgagactttagtagcattctcattcccaacgtttctttctggcttgaca 306 Query: 503 acctttggagtcccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtca 562 ||||| ||||| ||||||||||||||||| | |||||| ||||||||||| |||||||| Sbjct: 305 accttcggagttccttcgaagctcttgtccaagctccctgtcctcttgaacagctggtcg 246 Query: 563 aagtgaggcctgcagtagagcaccccttcgaacgagttgtaattcgcgagcttgagggtg 622 ||||||||||||||||||||||| || ||||| |||||||| || ||||||||||||||| Sbjct: 245 aagtgaggcctgcagtagagcactccctcgaaggagttgtagttggcgagcttgagggtg 186 Query: 623 cccttgcagtggtggcacctgaagcaggccttgtggtaga 662 ||||||||||||||||| | |||||||||||||||||||| Sbjct: 185 cccttgcagtggtggcagcggaagcaggccttgtggtaga 146
>dbj|AK058220.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F09, full insert sequence Length = 488 Score = 278 bits (140), Expect = 2e-71 Identities = 221/248 (89%) Strand = Plus / Minus Query: 224 ttctcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcag 283 ||||| || |||||||| || |||||||||||||||| ||| | |||||||||||||| Sbjct: 248 ttctcaagttggctgaagttccccttctctttgatcaactgaatatggtggtgcttgcaa 189 Query: 284 aagagcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcag 343 ||||||| || ||||| ||||||||||| || ||||| |||||||| |||||||| ||| Sbjct: 188 tagagcttcccttcgtgtgcgatgtaatttgaggggctaatggtgcatcctccatgacag 129 Query: 344 catttgaagcagctcttgtggtacatggtgttattgacagtaaccctctcaattggatag 403 || ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 128 cacttgaagcagcttttgtgatacatggtgttattgacagtaaccctttcaattggatag 69 Query: 404 actgtcttgctgcatccaaaacatttctctctggtgccagcaaatgcgctcgagacttta 463 ||||||||| ||||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 68 actgtcttgttgcatcccacgcatttctctctcgtgccagcaaatgcgctcgagacttta 9 Query: 464 atagcatt 471 |||||||| Sbjct: 8 atagcatt 1
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 161 bits (81), Expect = 4e-36 Identities = 144/165 (87%) Strand = Plus / Minus Query: 224 ttctcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcag 283 ||||| || |||||||| || |||||||||||||||| ||| | |||||||||||||| Sbjct: 19722604 ttctcaagttggctgaagttccccttctctttgatcaactgaatatggtggtgcttgcaa 19722545 Query: 284 aagagcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcag 343 ||||||| || ||||| ||||||||||| || ||||| |||||||| |||||||| ||| Sbjct: 19722544 tagagcttcccttcgtgtgcgatgtaatttgaggggctaatggtgcatcctccatgacag 19722485 Query: 344 catttgaagcagctcttgtggtacatggtgttattgacagtaacc 388 || ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 19722484 cacttgaagcagcttttgtgatacatggtgttattgacagtaacc 19722440 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 386 accctctcaattggatagactgtcttgctgcatccaaaacatttctctctggtgccagca 445 ||||| ||||||||||||||||||||| ||||||| | ||||||||||| ||||||||| Sbjct: 19722205 accctttcaattggatagactgtcttgttgcatcccacgcatttctctctcgtgccagca 19722146 Query: 446 aatgcgctcgagactttaatagcattct 473 |||||||||||||||||||||||||||| Sbjct: 19722145 aatgcgctcgagactttaatagcattct 19722118 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Minus Query: 515 ccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaagtgaggcctg 574 ||||| ||||||||||| | || |||||||||||||| ||||| ||||||||||||||| Sbjct: 19721473 ccttcaaagctcttgtctaaacttccagtcctcttgaacagctgatcaaagtgaggcctg 19721414 Query: 575 cagtagagcaccccttcgaacgagttgtaattcgcgagct 614 ||||||||||| ||||| ||||||||||| |||||||||| Sbjct: 19721413 cagtagagcactccttcaaacgagttgtagttcgcgagct 19721374 Score = 89.7 bits (45), Expect = 1e-14 Identities = 51/53 (96%) Strand = Plus / Minus Query: 613 cttgagggtgcccttgcagtggtggcacctgaagcaggccttgtggtagaccc 665 |||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 19721178 cttgagggtgcccttgcaatggtggcaccggaagcaggccttgtggtagaccc 19721126 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 489 tttctggcttgacaacctttggagt 513 ||||||||||||||||||||||||| Sbjct: 19721602 tttctggcttgacaacctttggagt 19721578
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 161 bits (81), Expect = 4e-36 Identities = 144/165 (87%) Strand = Plus / Minus Query: 224 ttctcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcag 283 ||||| || |||||||| || |||||||||||||||| ||| | |||||||||||||| Sbjct: 19648818 ttctcaagttggctgaagttccccttctctttgatcaactgaatatggtggtgcttgcaa 19648759 Query: 284 aagagcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcag 343 ||||||| || ||||| ||||||||||| || ||||| |||||||| |||||||| ||| Sbjct: 19648758 tagagcttcccttcgtgtgcgatgtaatttgaggggctaatggtgcatcctccatgacag 19648699 Query: 344 catttgaagcagctcttgtggtacatggtgttattgacagtaacc 388 || ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 19648698 cacttgaagcagcttttgtgatacatggtgttattgacagtaacc 19648654 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 386 accctctcaattggatagactgtcttgctgcatccaaaacatttctctctggtgccagca 445 ||||| ||||||||||||||||||||| ||||||| | ||||||||||| ||||||||| Sbjct: 19648419 accctttcaattggatagactgtcttgttgcatcccacgcatttctctctcgtgccagca 19648360 Query: 446 aatgcgctcgagactttaatagcattct 473 |||||||||||||||||||||||||||| Sbjct: 19648359 aatgcgctcgagactttaatagcattct 19648332 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Minus Query: 515 ccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaagtgaggcctg 574 ||||| ||||||||||| | || |||||||||||||| ||||| ||||||||||||||| Sbjct: 19647687 ccttcaaagctcttgtctaaacttccagtcctcttgaacagctgatcaaagtgaggcctg 19647628 Query: 575 cagtagagcaccccttcgaacgagttgtaattcgcgagct 614 ||||||||||| ||||| ||||||||||| |||||||||| Sbjct: 19647627 cagtagagcactccttcaaacgagttgtagttcgcgagct 19647588 Score = 89.7 bits (45), Expect = 1e-14 Identities = 51/53 (96%) Strand = Plus / Minus Query: 613 cttgagggtgcccttgcagtggtggcacctgaagcaggccttgtggtagaccc 665 |||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 19647392 cttgagggtgcccttgcaatggtggcaccggaagcaggccttgtggtagaccc 19647340 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 489 tttctggcttgacaacctttggagt 513 ||||||||||||||||||||||||| Sbjct: 19647816 tttctggcttgacaacctttggagt 19647792
>emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb0078B20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133659 Score = 161 bits (81), Expect = 4e-36 Identities = 144/165 (87%) Strand = Plus / Plus Query: 224 ttctcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcag 283 ||||| || |||||||| || |||||||||||||||| ||| | |||||||||||||| Sbjct: 4389 ttctcaagttggctgaagttccccttctctttgatcaactgaatatggtggtgcttgcaa 4448 Query: 284 aagagcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcag 343 ||||||| || ||||| ||||||||||| || ||||| |||||||| |||||||| ||| Sbjct: 4449 tagagcttcccttcgtgtgcgatgtaatttgaggggctaatggtgcatcctccatgacag 4508 Query: 344 catttgaagcagctcttgtggtacatggtgttattgacagtaacc 388 || ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 4509 cacttgaagcagcttttgtgatacatggtgttattgacagtaacc 4553 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 386 accctctcaattggatagactgtcttgctgcatccaaaacatttctctctggtgccagca 445 ||||| ||||||||||||||||||||| ||||||| | ||||||||||| ||||||||| Sbjct: 4788 accctttcaattggatagactgtcttgttgcatcccacgcatttctctctcgtgccagca 4847 Query: 446 aatgcgctcgagactttaatagcattct 473 |||||||||||||||||||||||||||| Sbjct: 4848 aatgcgctcgagactttaatagcattct 4875 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 515 ccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaagtgaggcctg 574 ||||| ||||||||||| | || |||||||||||||| ||||| ||||||||||||||| Sbjct: 5520 ccttcaaagctcttgtctaaacttccagtcctcttgaacagctgatcaaagtgaggcctg 5579 Query: 575 cagtagagcaccccttcgaacgagttgtaattcgcgagct 614 ||||||||||| ||||| ||||||||||| |||||||||| Sbjct: 5580 cagtagagcactccttcaaacgagttgtagttcgcgagct 5619 Score = 89.7 bits (45), Expect = 1e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 613 cttgagggtgcccttgcagtggtggcacctgaagcaggccttgtggtagaccc 665 |||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 5815 cttgagggtgcccttgcaatggtggcaccggaagcaggccttgtggtagaccc 5867 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 489 tttctggcttgacaacctttggagt 513 ||||||||||||||||||||||||| Sbjct: 5391 tttctggcttgacaacctttggagt 5415
>ref|NM_100894.2| Arabidopsis thaliana transcription factor/ zinc ion binding AT1G10200 mRNA, complete cds Length = 944 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Minus Query: 227 tcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaag 286 ||||||||||| || ||||| ||||| ||||||||||| | || || |||||||| | Sbjct: 611 tcgagctggctcaagtttcctttctccttgatcagctgaatatgatgatgcttgcaatat 552 Query: 287 agcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagcat 346 ||||| |||||||| || ||||||||||||||||| || ||||| |||||||| || Sbjct: 551 agcttaccctcgtgagctatgtaattcgaagggcttatcgtgcagcctccatgtgtacac 492 Query: 347 ttgaagcagctcttgtggtaca 368 |||||||||||||||||||||| Sbjct: 491 ttgaagcagctcttgtggtaca 470 Score = 61.9 bits (31), Expect = 2e-06 Identities = 130/163 (79%) Strand = Plus / Minus Query: 505 ctttggagtcccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaa 564 |||||| |||||||||||||| || || || || ||||| ||||||||| || || || Sbjct: 327 ctttggtgtcccttcgaagcttttctcaagacttccagttctcttgaagttttgatcgaa 268 Query: 565 gtgaggcctgcagtagagcaccccttcgaacgagttgtaattcgcgagcttgagggtgcc 624 || || ||||||||||| || ||||| || ||||||||||| |||||||| || || Sbjct: 267 atgtggtctgcagtagagaactccttcaaaggagttgtaattgctaagcttgagagttcc 208 Query: 625 cttgcagtggtggcacctgaagcaggccttgtggtagacccgg 667 ||||| ||||| || | ||| || || ||||||||||||||| Sbjct: 207 tttgcaatggtgacatcggaaacaagctttgtggtagacccgg 165
>gb|AY072143.1| Arabidopsis thaliana At1g10200 mRNA sequence Length = 873 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Minus Query: 227 tcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaag 286 ||||||||||| || ||||| ||||| ||||||||||| | || || |||||||| | Sbjct: 577 tcgagctggctcaagtttcctttctccttgatcagctgaatatgatgatgcttgcaatat 518 Query: 287 agcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagcat 346 ||||| |||||||| || ||||||||||||||||| || ||||| |||||||| || Sbjct: 517 agcttaccctcgtgagctatgtaattcgaagggcttatcgtgcagcctccatgtgtacac 458 Query: 347 ttgaagcagctcttgtggtaca 368 |||||||||||||||||||||| Sbjct: 457 ttgaagcagctcttgtggtaca 436 Score = 61.9 bits (31), Expect = 2e-06 Identities = 130/163 (79%) Strand = Plus / Minus Query: 505 ctttggagtcccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaa 564 |||||| |||||||||||||| || || || || ||||| ||||||||| || || || Sbjct: 294 ctttggtgtcccttcgaagcttttctcaagacttccagttctcttgaagttttgatcgaa 235 Query: 565 gtgaggcctgcagtagagcaccccttcgaacgagttgtaattcgcgagcttgagggtgcc 624 || || ||||||||||| || ||||| || ||||||||||| |||||||| || || Sbjct: 234 atgtggtctgcagtagagaactccttcaaaggagttgtaattgctaagcttgagagttcc 175 Query: 625 cttgcagtggtggcacctgaagcaggccttgtggtagacccgg 667 ||||| ||||| || | ||| || || ||||||||||||||| Sbjct: 174 tttgcaatggtgacatcggaaacaagctttgtggtagacccgg 132
>gb|AF370569.1|AF370569 Arabidopsis thaliana similar to transcription factor SF3 (pir|IS37656) (F14N23.8) mRNA, complete cds Length = 610 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Minus Query: 227 tcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaag 286 ||||||||||| || ||||| ||||| ||||||||||| | || || |||||||| | Sbjct: 527 tcgagctggctcaagtttcctttctccttgatcagctgaatatgatgatgcttgcaatat 468 Query: 287 agcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagcat 346 ||||| |||||||| || ||||||||||||||||| || ||||| |||||||| || Sbjct: 467 agcttaccctcgtgagctatgtaattcgaagggcttatcgtgcagcctccatgtgtacac 408 Query: 347 ttgaagcagctcttgtggtaca 368 |||||||||||||||||||||| Sbjct: 407 ttgaagcagctcttgtggtaca 386 Score = 61.9 bits (31), Expect = 2e-06 Identities = 130/163 (79%) Strand = Plus / Minus Query: 505 ctttggagtcccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaa 564 |||||| |||||||||||||| || || || || ||||| ||||||||| || || || Sbjct: 243 ctttggtgtcccttcgaagcttttctcaagacttccagttctcttgaagttttgatcgaa 184 Query: 565 gtgaggcctgcagtagagcaccccttcgaacgagttgtaattcgcgagcttgagggtgcc 624 || || ||||||||||| || ||||| || ||||||||||| |||||||| || || Sbjct: 183 atgtggtctgcagtagagaactccttcaaaggagttgtaattgctaagcttgagagttcc 124 Query: 625 cttgcagtggtggcacctgaagcaggccttgtggtagacccgg 667 ||||| ||||| || | ||| || || ||||||||||||||| Sbjct: 123 tttgcaatggtgacatcggaaacaagctttgtggtagacccgg 81
>gb|AY085377.1| Arabidopsis thaliana clone 148790 mRNA, complete sequence Length = 886 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Minus Query: 227 tcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaag 286 ||||||||||| || ||||| ||||| ||||||||||| | || || |||||||| | Sbjct: 611 tcgagctggctcaagtttcctttctccttgatcagctgaatatgatgatgcttgcaatat 552 Query: 287 agcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagcat 346 ||||| |||||||| || ||||||||||||||||| || ||||| |||||||| || Sbjct: 551 agcttaccctcgtgagctatgtaattcgaagggcttatcgtgcagcctccatgtgtacac 492 Query: 347 ttgaagcagctcttgtggtaca 368 |||||||||||||||||||||| Sbjct: 491 ttgaagcagctcttgtggtaca 470 Score = 60.0 bits (30), Expect = 1e-05 Identities = 129/162 (79%) Strand = Plus / Minus Query: 505 ctttggagtcccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaa 564 |||||| |||||||||||||| || || || || ||||| ||||||||| || || || Sbjct: 327 ctttggtgtcccttcgaagcttttctcaagacttccagttctcttgaagttttgatcgaa 268 Query: 565 gtgaggcctgcagtagagcaccccttcgaacgagttgtaattcgcgagcttgagggtgcc 624 || || ||||||||||| || ||||| || ||||||||||| |||||||| || || Sbjct: 267 atgtggtctgcagtagagaactccttcaaaggagttgtaattgctaagcttgagagttcc 208 Query: 625 cttgcagtggtggcacctgaagcaggccttgtggtagacccg 666 ||||| ||||| || | ||| || || |||||||||||||| Sbjct: 207 tttgcaatggtgacatcggaaacaagctttgtggtagacccg 166
>gb|AC005489.1|AC005489 Genomic sequence for Arabidopsis thaliana BAC F14N23 from Chromosome 1, complete sequence Length = 100746 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 227 tcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaag 286 ||||||||||| || ||||| ||||| ||||||||||| | || || |||||||| | Sbjct: 27083 tcgagctggctcaagtttcctttctccttgatcagctgaatatgatgatgcttgcaatat 27142 Query: 287 agcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagcat 346 ||||| |||||||| || ||||||||||||||||| || ||||| |||||||| || Sbjct: 27143 agcttaccctcgtgagctatgtaattcgaagggcttatcgtgcagcctccatgtgtacac 27202 Query: 347 ttgaagcagctcttgtggtaca 368 |||||||||||||||||||||| Sbjct: 27203 ttgaagcagctcttgtggtaca 27224 Score = 40.1 bits (20), Expect = 9.1 Identities = 74/92 (80%) Strand = Plus / Plus Query: 515 ccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaagtgaggcctg 574 ||||||||||| || || || || ||||| ||||||||| || || || || || ||| Sbjct: 27700 ccttcgaagcttttctcaagacttccagttctcttgaagttttgatcgaaatgtggtctg 27759 Query: 575 cagtagagcaccccttcgaacgagttgtaatt 606 |||||||| || ||||| || ||||||||||| Sbjct: 27760 cagtagagaactccttcaaaggagttgtaatt 27791
>emb|X74319.1|ATLIM1 A.thaliana atl1 gene Length = 1140 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Minus Query: 227 tcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaag 286 ||||||||||| || ||||| ||||| ||||||||||| | || || |||||||| | Sbjct: 1065 tcgagctggctcaagtttcctttctccttgatcagctgaatatgatgatgcttgcaatat 1006 Query: 287 agcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagcat 346 ||||| |||||||| || ||||||||||||||||| || ||||| |||||||| || Sbjct: 1005 agcttaccctcgtgagctatgtaattcgaagggcttatcgtgcagcctccatgtgtacac 946 Query: 347 ttgaagcagctcttgtggtaca 368 |||||||||||||||||||||| Sbjct: 945 ttgaagcagctcttgtggtaca 924 Score = 40.1 bits (20), Expect = 9.1 Identities = 74/92 (80%) Strand = Plus / Minus Query: 515 ccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaagtgaggcctg 574 ||||||||||| || || || || ||||| ||||||||| || || || || || ||| Sbjct: 448 ccttcgaagcttttctcaagacttccagttctcttgaagttttgatcgaaatgtggtctg 389 Query: 575 cagtagagcaccccttcgaacgagttgtaatt 606 |||||||| || ||||| || ||||||||||| Sbjct: 388 cagtagagaactccttcaaaggagttgtaatt 357
>dbj|AB208712.1| Eucalyptus camaldulensis Eclim1 gene for transcription factor lim1, complete cds Length = 1878 Score = 97.6 bits (49), Expect = 5e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 226 ctcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaa 285 |||||| ||||||| ||| |||||||| || || ||||| |||||||||||| ||||| | Sbjct: 1555 ctcgagttggctgagattgcccttctcctttatgagctgagtgtggtggtgcctgcagta 1496 Query: 286 gagcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagca 345 ||| || |||||||| |||| ||| || || |||||||| |||||| || ||| ||| Sbjct: 1495 gagtttcccctcgtgtgcgacgtagttggatgggctgatcacgcaccccccgtgggtgca 1436 Query: 346 tttgaagcagctcttgtggta 366 ||||||||||||||||||||| Sbjct: 1435 tttgaagcagctcttgtggta 1415 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 613 cttgagggtgcccttgcagtggtggcacctgaagcaggccttgtggtaga 662 |||||| || || ||||| |||||||| |||||||||||||||||||||| Sbjct: 231 cttgagagtccctttgcaatggtggcatctgaagcaggccttgtggtaga 182 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 515 ccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaagtgaggcctg 574 ||||| ||||| || |||||||| ||||| |||||||||||||| || || || |||| | Sbjct: 919 ccttcaaagcttttttcgaggctgccagttctcttgaagagctgatcgaaatgcggccgg 860 Query: 575 cagta 579 ||||| Sbjct: 859 cagta 855
>dbj|AB208711.1| Eucalyptus camaldulensis Eclim1 mRNA for transcription factor lim1, complete cds Length = 945 Score = 97.6 bits (49), Expect = 5e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 226 ctcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaa 285 |||||| ||||||| ||| |||||||| || || ||||| |||||||||||| ||||| | Sbjct: 623 ctcgagttggctgagattgcccttctcctttatgagctgagtgtggtggtgcctgcagta 564 Query: 286 gagcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagca 345 ||| || |||||||| |||| ||| || || |||||||| |||||| || ||| ||| Sbjct: 563 gagtttcccctcgtgtgcgacgtagttggatgggctgatcacgcaccccccgtgggtgca 504 Query: 346 tttgaagcagctcttgtggta 366 ||||||||||||||||||||| Sbjct: 503 tttgaagcagctcttgtggta 483 Score = 87.7 bits (44), Expect = 4e-14 Identities = 122/148 (82%) Strand = Plus / Minus Query: 515 ccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaagtgaggcctg 574 ||||| ||||| || |||||||| ||||| |||||||||||||| || || || |||| | Sbjct: 328 ccttcaaagcttttttcgaggctgccagttctcttgaagagctgatcgaaatgcggccgg 269 Query: 575 cagtagagcaccccttcgaacgagttgtaattcgcgagcttgagggtgcccttgcagtgg 634 ||||| | || ||||| || || || || ||| | |||||||| || || ||||| ||| Sbjct: 268 cagtacaagactccttcaaatgaattatagttcccaagcttgagagtccctttgcaatgg 209 Query: 635 tggcacctgaagcaggccttgtggtaga 662 ||||| |||||||||||||||||||||| Sbjct: 208 tggcatctgaagcaggccttgtggtaga 181
>dbj|AB208710.1| Eucalyptus globulus Eglim1 gene for transcription factor lim1, complete cds Length = 1861 Score = 97.6 bits (49), Expect = 5e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 226 ctcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaa 285 |||||| ||||||| ||| |||||||| || || ||||| |||||||||||| ||||| | Sbjct: 1554 ctcgagttggctgagattgcccttctcctttatgagctgagtgtggtggtgcctgcagta 1495 Query: 286 gagcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagca 345 ||| || |||||||| |||| ||| || || |||||||| |||||| || ||| ||| Sbjct: 1494 gagtttcccctcgtgcgcgacgtagttggatgggctgatcacgcaccccccgtgggtgca 1435 Query: 346 tttgaagcagctcttgtggta 366 ||||||||||||||||||||| Sbjct: 1434 tttgaagcagctcttgtggta 1414 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 613 cttgagggtgcccttgcagtggtggcacctgaagcaggccttgtggtaga 662 |||||| || || ||||| |||||||| |||||||||||||||||||||| Sbjct: 241 cttgagagtccctttgcaatggtggcatctgaagcaggccttgtggtaga 192 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 515 ccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaagtgaggcctg 574 ||||| ||||| || |||||||| ||||| |||||||||||||| || || || |||| | Sbjct: 918 ccttcaaagcttttttcgaggctgccagttctcttgaagagctgatcgaaatgcggccgg 859 Query: 575 cagta 579 ||||| Sbjct: 858 cagta 854
>dbj|AB208709.1| Eucalyptus globulus Eglim1 mRNA for transcription factor lim1, complete cds Length = 941 Score = 97.6 bits (49), Expect = 5e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 226 ctcgagctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaa 285 |||||| ||||||| ||| |||||||| || || ||||| |||||||||||| ||||| | Sbjct: 634 ctcgagttggctgagattgcccttctcctttatgagctgagtgtggtggtgcctgcagta 575 Query: 286 gagcttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagca 345 ||| || |||||||| |||| ||| || || |||||||| |||||| || ||| ||| Sbjct: 574 gagtttcccctcgtgcgcgacgtagttggatgggctgatcacgcaccccccgtgggtgca 515 Query: 346 tttgaagcagctcttgtggta 366 ||||||||||||||||||||| Sbjct: 514 tttgaagcagctcttgtggta 494 Score = 87.7 bits (44), Expect = 4e-14 Identities = 122/148 (82%) Strand = Plus / Minus Query: 515 ccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaagtgaggcctg 574 ||||| ||||| || |||||||| ||||| |||||||||||||| || || || |||| | Sbjct: 339 ccttcaaagcttttttcgaggctgccagttctcttgaagagctgatcgaaatgcggccgg 280 Query: 575 cagtagagcaccccttcgaacgagttgtaattcgcgagcttgagggtgcccttgcagtgg 634 ||||| | || ||||| || || || || ||| | |||||||| || || ||||| ||| Sbjct: 279 cagtacaagactccttcaaatgaattatagttcccaagcttgagagtccctttgcaatgg 220 Query: 635 tggcacctgaagcaggccttgtggtaga 662 ||||| |||||||||||||||||||||| Sbjct: 219 tggcatctgaagcaggccttgtggtaga 192
>gb|DQ242645.1| Brassica napus LIM domain protein mRNA, complete cds Length = 570 Score = 93.7 bits (47), Expect = 7e-16 Identities = 116/139 (83%) Strand = Plus / Minus Query: 230 agctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaagagc 289 |||||||| |||||||| ||||| ||||||||||| | || ||||||||||| | ||| Sbjct: 524 agctggctcaaatttcctttctccttgatcagctgaatatgatggtgcttgcaataaagc 465 Query: 290 ttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagcatttg 349 || |||||||| || |||||||||||||| || || ||||| || ||||| || ||| Sbjct: 464 ttcccctcgtgagctatgtaattcgaaggacttatcgtgcatcccccatgtgtacacttg 405 Query: 350 aagcagctcttgtggtaca 368 ||||||||||||||||||| Sbjct: 404 aagcagctcttgtggtaca 386 Score = 69.9 bits (35), Expect = 1e-08 Identities = 131/163 (80%) Strand = Plus / Minus Query: 505 ctttggagtcccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaa 564 |||||| ||||||||||||||||| || || || || || ||||||||| ||| ||||| Sbjct: 243 ctttggtgtcccttcgaagctcttctcaagacttcctgttctcttgaagttctgatcaaa 184 Query: 565 gtgaggcctgcagtagagcaccccttcgaacgagttgtaattcgcgagcttgagggtgcc 624 || || ||||| ||||| | ||||| || ||||||||||| |||||||| || || Sbjct: 183 atgtggtctgcaatagagagctccttcaaaggagttgtaattgctaagcttgagagttcc 124 Query: 625 cttgcagtggtggcacctgaagcaggccttgtggtagacccgg 667 ||||| ||||| || | ||| ||||| ||||||||||||||| Sbjct: 123 tttgcaatggtgacagcggaaacaggctttgtggtagacccgg 81
>gb|DQ242049.1| Brassica napus LIM-domain protein (LIM) gene, complete cds Length = 1127 Score = 93.7 bits (47), Expect = 7e-16 Identities = 116/139 (83%) Strand = Plus / Minus Query: 230 agctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaagagc 289 |||||||| |||||||| ||||| ||||||||||| | || ||||||||||| | ||| Sbjct: 1046 agctggctcaaatttcctttctccttgatcagctgaatatgatggtgcttgcaataaagc 987 Query: 290 ttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagcatttg 349 || |||||||| || |||||||||||||| || || ||||| || ||||| || ||| Sbjct: 986 ttcccctcgtgagctatgtaattcgaaggacttatcgtgcatcccccatgtgtacacttg 927 Query: 350 aagcagctcttgtggtaca 368 ||||||||||||||||||| Sbjct: 926 aagcagctcttgtggtaca 908 Score = 40.1 bits (20), Expect = 9.1 Identities = 74/92 (80%) Strand = Plus / Minus Query: 515 ccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaagtgaggcctg 574 |||||||||||||| || || || || || ||||||||| ||| ||||| || || ||| Sbjct: 430 ccttcgaagctcttctcaagacttcctgttctcttgaagttctgatcaaaatgtggtctg 371 Query: 575 cagtagagcaccccttcgaacgagttgtaatt 606 || ||||| | ||||| || ||||||||||| Sbjct: 370 caatagagagctccttcaaaggagttgtaatt 339
>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence Length = 129658 Score = 81.8 bits (41), Expect = 3e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 230 agctggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaagagc 289 |||||||| ||||||||||| | |||||||| || | |||||||| |||||| |||| Sbjct: 88839 agctggcttaaatttcccttttgcttgatcagttgaatatggtggtgtttgcagtagagt 88898 Query: 290 ttgccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagcatttg 349 || ||||| || || |||||||| ||||| ||||| || ||||||||||| || |||||| Sbjct: 88899 tttccctcatgtgctatgtaattggaaggactgatagtacaccctccatgacaacatttg 88958 Query: 350 aagcagctcttgtggta 366 || || ||||| ||||| Sbjct: 88959 aaacaactcttatggta 88975
>gb|AY217117.1| Thinopyrum intermedium NBS-type putative resistance protein mRNA, partial cds Length = 218 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/152 (82%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 103 tatactgctctggtgcaaatgcagaagggctcgttattc--atctctggatatcctcaag 160 ||||||||||||| |||| |||| ||| ||| ||||| ||||||| |||| |||| | Sbjct: 47 tatactgctctggagcaattgcaagaggactcattattttgatctctgaatattctcagg 106 Query: 161 gactaatactccgagtcttcatcatccactgacccggcactttgtgacgtcttgtcgtga 220 || |||||||| | ||||| ||||||||| | || |||||||| || ||| ||||| Sbjct: 107 gattaatactctcattcttcctcatccactcatccagcactttgagatcacttctcgtgg 166 Query: 221 tcgttctcgagctggctgaaatttcccttctc 252 ||||||||||||||||||||||| |||||||| Sbjct: 167 tcgttctcgagctggctgaaattccccttctc 198
>gb|AF116849.1|AF116849 Helianthus annuus Length = 1280 Score = 75.8 bits (38), Expect = 2e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 245 cccttctctttgatcagctgggtgtggtggtgcttgcagaagagcttgccctcgtgggcg 304 |||||||||||||| || |||||||||||||| ||||| |||| | || || || ||| Sbjct: 923 cccttctctttgatgagttgggtgtggtggtgtctgcagtagagatgaccttcatgcgcg 864 Query: 305 atgtaattcgaagggctgatggtgcaccctccatggcagcatttgaagcagctcttgtgg 364 || |||||||| |||||||| || || |||||||||| ||||| ||||| || |||||| Sbjct: 863 atataattcgatgggctgattgtacaacctccatggctacatttaaagcaacttttgtgg 804 Query: 365 ta 366 || Sbjct: 803 ta 802
>gb|AF187105.1|AF187105 Helianthus annuus LIM domain protein WLIM1 (WLIM1) mRNA, complete cds Length = 728 Score = 75.8 bits (38), Expect = 2e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 245 cccttctctttgatcagctgggtgtggtggtgcttgcagaagagcttgccctcgtgggcg 304 |||||||||||||| || |||||||||||||| ||||| |||| | || || || ||| Sbjct: 509 cccttctctttgatgagttgggtgtggtggtgtctgcagtagagatgaccttcatgcgcg 450 Query: 305 atgtaattcgaagggctgatggtgcaccctccatggcagcatttgaagcagctcttgtgg 364 || |||||||| |||||||| || || |||||||||| ||||| ||||| || |||||| Sbjct: 449 atataattcgatgggctgattgtacaacctccatggctacatttaaagcaacttttgtgg 390 Query: 365 ta 366 || Sbjct: 389 ta 388
>dbj|AB079510.1| Populus kitakamiensis Pklim1 mRNA for transcription factor LIM, complete cds Length = 1036 Score = 75.8 bits (38), Expect = 2e-10 Identities = 137/170 (80%) Strand = Plus / Minus Query: 491 tctggcttgacaacctttggagtcccttcgaagctcttgtcgaggctcccagtcctcttg 550 |||||||| |||| ||||| ||||| || ||||| ||||| || || ||||| || ||| Sbjct: 435 tctggctttacaatttttggtgtcccctcaaagcttttgtcaagactgccagttcttttg 376 Query: 551 aagagctggtcaaagtgaggcctgcagtagagcaccccttcgaacgagttgtaattcgcg 610 || || || ||||| || |||||||||||||| |||||||| || || ||||| || | Sbjct: 375 aacagttgatcaaaatgtggcctgcagtagagaaccccttcaaaggaattgtagttgcca 316 Query: 611 agcttgagggtgcccttgcagtggtggcacctgaagcaggccttgtggta 660 ||||||||||| || ||||| || ||||| | |||||| ||||| ||||| Sbjct: 315 agcttgagggttcctttgcaatgatggcatcggaagcaagccttatggta 266 Score = 44.1 bits (22), Expect = 0.58 Identities = 106/134 (79%) Strand = Plus / Minus Query: 233 tggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaagagcttg 292 ||||| || |||||||| || ||||| || ||| |||||||||| |||||| |||| Sbjct: 699 tggctcaagtttcccttttccttgataagttggttgtggtggtgtttgcagtagaggcga 640 Query: 293 ccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagcatttgaag 352 || || || || ||||| || || ||||| || || || ||||| ||| |||||||||| Sbjct: 639 ccttcatgtgcaatgtagtttgatgggctaattgtacatcctccgtggatgcatttgaag 580 Query: 353 cagctcttgtggta 366 ||||| |||||||| Sbjct: 579 cagcttttgtggta 566
>gb|AF197567.1|AF197567 Nicotiana tabacum pollen specific LIM domain protein 1a mRNA, complete cds Length = 904 Score = 65.9 bits (33), Expect = 2e-07 Identities = 120/149 (80%) Strand = Plus / Minus Query: 509 ggagtcccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaagtga 568 ||||| ||||| || |||||||| | || ||||| ||||| || ||||| ||||||||| Sbjct: 354 ggagttccttcaaaactcttgtccaaactgccagttctcttaaaaagctgatcaaagtga 295 Query: 569 ggcctgcagtagagcaccccttcgaacgagttgtaattcgcgagcttgagggtgcccttg 628 ||||| ||||| | ||||| || || |||||| |||| ||||||||| || | ||| Sbjct: 294 ggcctacagtaaattaccccctcaaaggagttgaaattactgagcttgagagtacttttg 235 Query: 629 cagtggtggcacctgaagcaggccttgtg 657 ||||||| |||||| ||||| |||||||| Sbjct: 234 cagtggtagcacctaaagcaagccttgtg 206
>gb|AF197568.1|AF197568 Nicotiana tabacum pollen specific LIM domain protein 1b mRNA, complete cds Length = 813 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 539 ccagtcctcttgaagagctggtcaaagtgaggcctgcagtagagcaccccttcgaacgag 598 ||||| ||||| || ||||| |||||||||||||| ||||| | ||||| || || ||| Sbjct: 311 ccagttctcttaaaaagctgatcaaagtgaggcctacagtaaattaccccctcaaaggag 252 Query: 599 ttgtaattcgcgagcttgagggtgcccttgcagtggtggcacctgaagcaggccttgtg 657 ||| |||| ||||||||| || | ||||| |||| |||||||||||| |||||||| Sbjct: 251 ttgaaattactgagcttgagagtacttttgcaatggtagcacctgaagcaagccttgtg 193 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 269 tggtggtgcttgcagaagagcttgccctcgtgggcgatgtaattcgaagggctgatggtg 328 |||||||||||||| | ||| | ||||| || || |||||||| || ||||| || || Sbjct: 587 tggtggtgcttgcaataaagccttccctcatgtgcaatgtaatttgatgggcttattgta 528 Query: 329 caccctccatggcagcatttgaagcagctcttgtggta 366 || |||||||| | |||||||||||||| ||| ||||| Sbjct: 527 cagcctccatgactgcatttgaagcagcccttatggta 490
>gb|DQ167188.1| Brassica rapa putative transcription factor LIM mRNA, partial cds Length = 338 Score = 54.0 bits (27), Expect = 6e-04 Identities = 129/163 (79%) Strand = Plus / Minus Query: 505 ctttggagtcccttcgaagctcttgtcgaggctcccagtcctcttgaagagctggtcaaa 564 |||||| |||||||||||||| || || || || ||||| ||||||||| || || || Sbjct: 189 ctttggtgtcccttcgaagcttttctcaagacttccagttctcttgaagttttgatcgaa 130 Query: 565 gtgaggcctgcagtagagcaccccttcgaacgagttgtaattcgcgagcttgagggtgcc 624 ||||| ||||| ||||| || ||||| || |||||||| || |||||||| || || Sbjct: 129 atgaggtctgcaatagagaactccttcaaatgagttgtagttgctaagcttgagagttcc 70 Query: 625 cttgcagtggtggcacctgaagcaggccttgtggtagacccgg 667 ||||| ||||| || | ||| || || ||||||||||||||| Sbjct: 69 tttgcaatggtgacaacggaaacaagctttgtggtagacccgg 27
>gb|AF184109.1|AF184109 Nicotiana tabacum LIM domain protein WLIM1 mRNA, complete cds Length = 898 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Minus Query: 548 ttgaagagctggtcaaagtgaggcctgcagtagagcaccccttcgaacgagttgtaattc 607 ||||||||||| |||||||| || || ||||| || || || || || || ||||| || Sbjct: 200 ttgaagagctgatcaaagtgtggtctacagtatagaactccctcaaaggaattgtagttg 141 Query: 608 gcgagcttgagggtgcccttgcagtggtggcacctgaagcaggccttgtggtaga 662 | |||||||| |||||||||||||| ||||| ||||| || || ||||| |||| Sbjct: 140 ccaagcttgagagtgcccttgcagtgatggcatctgaaacaagctttgtgataga 86 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 332 cctccatggcagcatttgaagcagctcttgtggta 366 ||||| |||| |||||||||||||||||| ||||| Sbjct: 422 cctccgtggctgcatttgaagcagctcttatggta 388
>dbj|AB079513.1| Nicotiana tabacum Ntlim1 mRNA for transcription factor LIM, complete cds Length = 615 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Minus Query: 548 ttgaagagctggtcaaagtgaggcctgcagtagagcaccccttcgaacgagttgtaattc 607 ||||||||||| |||||||| || || ||||| || || || || || || ||||| || Sbjct: 203 ttgaagagctgatcaaagtgtggtctacagtatagaactccctcaaaggaattgtagttg 144 Query: 608 gcgagcttgagggtgcccttgcagtggtggcacctgaagcaggccttgtggtaga 662 | |||||||| |||||||||||||| ||||| ||||| || || ||||| |||| Sbjct: 143 ccaagcttgagagtgcccttgcagtgatggcatctgaaacaagctttgtgataga 89 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 332 cctccatggcagcatttgaagcagctcttgtggta 366 ||||| |||| |||||||||||||||||| ||||| Sbjct: 425 cctccgtggctgcatttgaagcagctcttatggta 391
>gb|AC122175.9| Pan troglodytes clone rp43-99g12, complete sequence Length = 196097 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 256 gatcagctgggtgtggtggtgcttgc 281 |||||||||||||||||||||||||| Sbjct: 51210 gatcagctgggtgtggtggtgcttgc 51235
>gb|AF049917.1|AF049917 Petunia x hybrida PGPS/D1 (PGPS/D1) mRNA, complete cds Length = 897 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 380 acagtaaccctctcaattggatagactgtcttgctgcatccaaaacatttctctctggtg 439 |||| |||| ||||||||||||| || || || |||||||||| |||||| || |||||| Sbjct: 534 acagaaaccttctcaattggatatacagttttactgcatccaacacatttatccctggtg 475 Query: 440 cc 441 || Sbjct: 474 cc 473
>gb|AC182395.3| Pan troglodytes BAC clone CH251-484N21 from chromosome 2, complete sequence Length = 176398 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgcttgc 281 ||||||||||||||||||||||||| Sbjct: 72678 atcagctgggtgtggtggtgcttgc 72702
>emb|X64392.1|HASF3DNA H.annuus SF3 gene for transcription factor SF3 Length = 1439 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 267 tgtggtggtgcttgcagaagagcttgccctcgtgggcgatgtaattcgaagggctgatgg 326 |||||||||||||||| | ||| |||| || || || ||||| || || ||||| || | Sbjct: 980 tgtggtggtgcttgcaataaagcctgccttcatgagcaatgtagtttgatgggcttatag 921 Query: 327 tgcaccctccatggcagcatttgaa 351 ||||||| ||||| ||||||||||| Sbjct: 920 tgcaccccccatgacagcatttgaa 896
>gb|AY265973.1| Homo sapiens apoptosis inhibitor 5 (API5) gene, complete cds Length = 33168 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgcttgc 281 ||||||||||||||||||||||||| Sbjct: 13391 atcagctgggtgtggtggtgcttgc 13367
>gb|AC132479.2| Homo sapiens BAC clone RP11-769N11 from 2, complete sequence Length = 168824 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgcttgc 281 ||||||||||||||||||||||||| Sbjct: 153316 atcagctgggtgtggtggtgcttgc 153292
>gb|AC131180.3| Homo sapiens BAC clone RP11-316I2 from 2, complete sequence Length = 132753 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgcttgc 281 ||||||||||||||||||||||||| Sbjct: 55178 atcagctgggtgtggtggtgcttgc 55202
>gb|AC013269.10| Homo sapiens BAC clone RP11-356I10 from 2, complete sequence Length = 165797 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgcttgc 281 ||||||||||||||||||||||||| Sbjct: 15345 atcagctgggtgtggtggtgcttgc 15321
>gb|AC018804.9| Homo sapiens BAC clone RP11-397H17 from 2, complete sequence Length = 195514 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgcttgc 281 ||||||||||||||||||||||||| Sbjct: 149671 atcagctgggtgtggtggtgcttgc 149695
>gb|AC140481.3| Homo sapiens BAC clone RP11-1216L17 from 2, complete sequence Length = 219471 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgcttgc 281 ||||||||||||||||||||||||| Sbjct: 147280 atcagctgggtgtggtggtgcttgc 147256
>gb|AC092602.2| Homo sapiens BAC clone RP11-134G21 from 2, complete sequence Length = 166299 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgcttgc 281 ||||||||||||||||||||||||| Sbjct: 154791 atcagctgggtgtggtggtgcttgc 154767
>gb|AC018865.4| Homo sapiens BAC clone RP11-32C20 from 2, complete sequence Length = 165411 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgcttgc 281 ||||||||||||||||||||||||| Sbjct: 144766 atcagctgggtgtggtggtgcttgc 144742
>gb|AF187104.1|AF187104 Helianthus annuus LIM domain protein PLIM1a (PLIM1a) mRNA, complete cds Length = 912 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 267 tgtggtggtgcttgcagaagagcttgccctcgtgggcgatgtaattcgaagggctgatgg 326 |||||||||||||||| | ||| |||| || || || ||||| || || ||||| || | Sbjct: 591 tgtggtggtgcttgcaataaagcctgccttcatgagcaatgtagtttgatgggcttatag 532 Query: 327 tgcaccctccatggcagcatttgaa 351 ||||||| ||||| ||||||||||| Sbjct: 531 tgcaccccccatgacagcatttgaa 507
>gb|AF187103.1|AF187103 Helianthus annuus LIM domain protein PLIM1b (PLIM1b) mRNA, complete cds Length = 956 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 267 tgtggtggtgcttgcagaagagcttgccctcgtgggcgatgtaattcgaagggctgatgg 326 |||||||||||||||| | ||| |||| || || || ||||| || || ||||| || | Sbjct: 557 tgtggtggtgcttgcaataaagcctgccttcatgagcaatgtagtttgatgggcttatag 498 Query: 327 tgcaccctccatggcagcatttgaa 351 ||||||| ||||| ||||||||||| Sbjct: 497 tgcaccccccatgacagcatttgaa 473
>emb|AJ279864.1|OEU279864 Olea europaea microsatellite DNA at locus ssrOeUA-DCA 15 Length = 382 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 547 cttgaagagctggtcaaagtgaggcctgcagta 579 |||||||||||| |||||||||||| ||||||| Sbjct: 301 cttgaagagctgctcaaagtgaggcttgcagta 333
>gb|AC087276.13| Homo sapiens chromosome 11, clone RP11-484D2, complete sequence Length = 204109 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgcttgc 281 ||||||||||||||||||||||||| Sbjct: 156621 atcagctgggtgtggtggtgcttgc 156645 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 56846 atcagctgggtgtggtggtgc 56826
>ref|XM_473290.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 606 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Minus Query: 327 tgcaccctccatggcagcatttgaagcagctcttgtggta 366 |||| |||||||| |||| |||||||||||||||||||| Sbjct: 412 tgcagcctccatgagagcacttgaagcagctcttgtggta 373 Score = 40.1 bits (20), Expect = 9.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 547 cttgaagagctggtcaaagtgaggcctgcagtagag 582 |||||||||||| |||||||| | | |||||||||| Sbjct: 201 cttgaagagctgctcaaagtgggtcttgcagtagag 166
>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24, complete sequence Length = 121056 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 327 tgcaccctccatggcagcatttgaagcagctcttgtggta 366 |||| |||||||| |||| |||||||||||||||||||| Sbjct: 34489 tgcagcctccatgagagcacttgaagcagctcttgtggta 34528 Score = 40.1 bits (20), Expect = 9.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 547 cttgaagagctggtcaaagtgaggcctgcagtagag 582 |||||||||||| |||||||| | | |||||||||| Sbjct: 35195 cttgaagagctgctcaaagtgggtcttgcagtagag 35230
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 327 tgcaccctccatggcagcatttgaagcagctcttgtggta 366 |||| |||||||| |||| |||||||||||||||||||| Sbjct: 131817 tgcagcctccatgagagcacttgaagcagctcttgtggta 131856 Score = 40.1 bits (20), Expect = 9.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 547 cttgaagagctggtcaaagtgaggcctgcagtagag 582 |||||||||||| |||||||| | | |||||||||| Sbjct: 132523 cttgaagagctgctcaaagtgggtcttgcagtagag 132558
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 327 tgcaccctccatggcagcatttgaagcagctcttgtggta 366 |||| |||||||| |||| |||||||||||||||||||| Sbjct: 26594931 tgcagcctccatgagagcacttgaagcagctcttgtggta 26594970 Score = 40.1 bits (20), Expect = 9.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 547 cttgaagagctggtcaaagtgaggcctgcagtagag 582 |||||||||||| |||||||| | | |||||||||| Sbjct: 26595637 cttgaagagctgctcaaagtgggtcttgcagtagag 26595672
>dbj|AK069907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034M24, full insert sequence Length = 955 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Minus Query: 327 tgcaccctccatggcagcatttgaagcagctcttgtggta 366 |||| |||||||| |||| |||||||||||||||||||| Sbjct: 476 tgcagcctccatgagagcacttgaagcagctcttgtggta 437 Score = 40.1 bits (20), Expect = 9.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 547 cttgaagagctggtcaaagtgaggcctgcagtagag 582 |||||||||||| |||||||| | | |||||||||| Sbjct: 265 cttgaagagctgctcaaagtgggtcttgcagtagag 230
>gb|AC128639.13| Papio anubis clone rp41-2d18, complete sequence Length = 173331 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgca 282 ||||||||||||||||||||||| Sbjct: 81846 agctgggtgtggtggtgcttgca 81824
>dbj|AB023479.1| Nicotiana tabacum mRNA for transcription factor Ntlim1, complete cds Length = 957 Score = 46.1 bits (23), Expect = 0.15 Identities = 92/115 (80%) Strand = Plus / Minus Query: 548 ttgaagagctggtcaaagtgaggcctgcagtagagcaccccttcgaacgagttgtaattc 607 ||||||||||| |||||||| || || ||||| || || || || || || ||||| || Sbjct: 285 ttgaagagctgatcaaagtgtggtctacagtatagaactccctcaaaggaattgtagttg 226 Query: 608 gcgagcttgagggtgcccttgcagtggtggcacctgaagcaggccttgtggtaga 662 | ||||||| |||||||||||||| ||||| ||||| || || ||||| |||| Sbjct: 225 ccaagcttgacagtgcccttgcagtgatggcatctgaaacaagctttgtgataga 171
>dbj|AB079512.1| Nicotiana tabacum Ntlim1 gene for transcription factor LIM, complete cds Length = 1563 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 332 cctccatggcagcatttgaagcagctcttgtggta 366 ||||| |||| |||||||||||||||||| ||||| Sbjct: 1376 cctccgtggctgcatttgaagcagctcttatggta 1342
>dbj|AB079511.1| Populus kitakamiensis Pklim1 gene for transcription factor LIM, complete cds Length = 1948 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Minus Query: 521 aagctcttgtcgaggctcccagtcctcttgaagagctggtcaaagtgaggcctgcagtag 580 ||||| ||||| || || ||||| || ||||| || || ||||| || |||||||||||| Sbjct: 980 aagcttttgtcaagactgccagttcttttgaacagttgatcaaaatgtggcctgcagtag 921 Query: 581 agcaccccttc 591 || |||||||| Sbjct: 920 agaaccccttc 910 Score = 44.1 bits (22), Expect = 0.58 Identities = 106/134 (79%) Strand = Plus / Minus Query: 233 tggctgaaatttcccttctctttgatcagctgggtgtggtggtgcttgcagaagagcttg 292 ||||| || |||||||| || ||||| || ||| |||||||||| |||||| |||| Sbjct: 1597 tggctcaagtttcccttttccttgatgagttggttgtggtggtgtttgcagtagaggcga 1538 Query: 293 ccctcgtgggcgatgtaattcgaagggctgatggtgcaccctccatggcagcatttgaag 352 || || || || ||||| || || ||||| || || || ||||| ||| |||||||||| Sbjct: 1537 ccttcatgtgcaatgtagtttgatgggctaattgtacatcctccgtggatgcatttgaag 1478 Query: 353 cagctcttgtggta 366 ||||| |||||||| Sbjct: 1477 cagcttttgtggta 1464
>ref|XM_466988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 621 Score = 44.1 bits (22), Expect = 0.58 Identities = 40/46 (86%) Strand = Plus / Minus Query: 616 gagggtgcccttgcagtggtggcacctgaagcaggccttgtggtag 661 |||||| |||||||||||| |||| ||||||| | |||||||||| Sbjct: 132 gagggtccccttgcagtggctgcacttgaagcatgtcttgtggtag 87
>gb|DQ205685.1| Homo sapiens mitochondrial ribosomal protein L37 (MRPL37) gene, complete cds; nuclear gene for mitochondrial product Length = 22165 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 5420 agctgggtgtggtggtgcttgc 5399
>gb|AC165164.4| Mus musculus BAC clone RP23-117C21 from chromosome 10, complete sequence Length = 189986 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 252 ctttgatcagctgggtgtggtggtgc 277 ||||||| |||||||||||||||||| Sbjct: 105425 ctttgattagctgggtgtggtggtgc 105450
>gb|AC147337.3| Pan troglodytes BAC clone CH251-104M9 from Y, complete sequence Length = 168027 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 122167 agctgggtgtggtggtgcttgc 122146
>gb|AC146018.3| Pan troglodytes BAC clone RP43-135A21 from 7, complete sequence Length = 177841 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgct 278 |||||||||||||||||||||| Sbjct: 17577 atcagctgggtgtggtggtgct 17598
>gb|AC009712.22| Homo sapiens chromosome 15, clone RP11-361M10, complete sequence Length = 213746 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgct 278 |||||||||||||||||||||| Sbjct: 197832 atcagctgggtgtggtggtgct 197811
>gb|AC119211.8| Mus musculus chromosome 7, clone RP24-191C15, complete sequence Length = 172286 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 98573 agctgggtgtggtggtgcttgc 98552
>gb|AC183830.2| Pan troglodytes BAC clone CH251-267I9 from chromosome 7, complete sequence Length = 157720 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 gatcagctgggtgtggtggtgc 277 |||||||||||||||||||||| Sbjct: 5460 gatcagctgggtgtggtggtgc 5481
>gb|AC005096.4| Homo sapiens BAC clone CTA-339C12 from 7, complete sequence Length = 185376 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 23045 agctgggtgtggtggtgcttgc 23066
>gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, complete sequence Length = 176797 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 143521 agctgggtgtggtggtgcttgc 143500
>gb|AC146215.2| Pan troglodytes BAC clone CH251-299B14 from Y, complete sequence Length = 163780 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 46969 agctgggtgtggtggtgcttgc 46948
>gb|AC087778.3| Pan troglodytes clone RP43-176J10, complete sequence Length = 63176 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 256 gatcagctgggtgtggtggtgc 277 |||||||||||||||||||||| Sbjct: 54591 gatcagctgggtgtggtggtgc 54570
>emb|Z85986.1|HS108K11 Human DNA sequence from clone RP1-108K11 on chromosome 6p21 Contains the SFRS3 for splicing factor arginine/serine-rich (SRP20), the STK38 gene for serine/threonine protein kinase (NDR), the 3' end of a gene for a novel protein (2410004NRIK) and a CpG island, complete sequence Length = 145616 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgct 278 |||||||||||||||||||||| Sbjct: 124584 atcagctgggtgtggtggtgct 124605
>emb|Z97056.1|HS434P1 Human DNA sequence from clone RP3-434P1 on chromosome 22, complete sequence Length = 124990 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 13852 agctgggtgtggtggtgcttgc 13873
>emb|AL627313.16| Human DNA sequence from clone RP11-492M19 on chromosome 1 Contains a novel pseudogene (LOC151871), a novel gene similar to ribosomal protein S6 kinase, 90kDa, polypeptide 1 (RPS6KA1), a chromosome 20 open reading frame 52 (C20orf52) pseudogene and two CpG islands, complete sequence Length = 128342 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgct 278 |||||||||||||||||||||| Sbjct: 15681 atcagctgggtgtggtggtgct 15660
>emb|AL591002.9| Human DNA sequence from clone RP11-527B17 on chromosome 6 Contains part of gene KIAA0229 for a novel Ank, SAM (Sterile alpha motif) and Phosphotyrosine interaction (PTB/PID) domain containing protein and a heat shock 10kD protein 1 (chaperonin 10) (HSPE1) pseudogene, complete sequence Length = 76785 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 3681 agctgggtgtggtggtgcttgc 3660
>emb|AL365504.33| Human DNA sequence from clone RP11-524I9 on chromosome 9 Contains the 5' end of the STRBP gene for spermatid perinuclear RNA binding protein (FLJ11307), the 5' end of a novel gene for a delta-notch-like protein (FLJ38464), a novel gene (PRO2206) and a CpG island, complete sequence Length = 154612 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 51564 agctgggtgtggtggtgcttgc 51543
>emb|AL359972.10| Human DNA sequence from clone RP1-105K17 on chromosome Xq13.2-21.1, complete sequence Length = 80630 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 1750 agctgggtgtggtggtgcttgc 1729
>emb|AL358074.22| Human DNA sequence from clone RP11-423C15 on chromosome 9 Contains the 5' end of the MAPKAP1 gene for mitogen-activated protein kinase associated protein 1, a novel gene, the 5' end of the PBX3 gene for pre-B-cell leukemia transcription factor 3 and three CpG islands, complete sequence Length = 109081 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 338 agctgggtgtggtggtgcttgc 317
>emb|AL357673.12| Human DNA sequence from clone RP11-446E24 on chromosome 1 Contains a novel protein, two novel genes and the 5' end of the MRPL37 gene for mitochondrial ribosomal protein L37, complete sequence Length = 93717 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 80829 agctgggtgtggtggtgcttgc 80808
>emb|AL356653.13| Human DNA sequence from clone RP11-570P14 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ40160) and a small nuclear ribonucleoprotein D1 polypeptide 16kDa (SNRPD1) pseudogene, complete sequence Length = 16184 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 15422 agctgggtgtggtggtgcttgc 15401
>emb|AL353135.32| Human DNA sequence from clone RP11-63L7 on chromosome 6 Contains the PROL2 gene for proline rich 2 (proline-rich protein with nuclear targeting signal), the gene for NB4 apoptosis/differentiation related protein (PNAS-145), the gene for serine-arginine repressor protein (35kDa) (SRrp35), the gene for a novel protein similar to putative amidohydrolase, the 3' end of the GABRR1 gene for gamma-aminobutyric acid (GABA) receptor, rho 1 and 3 CpG islands, complete sequence Length = 127653 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 79761 agctgggtgtggtggtgcttgc 79740
>emb|AL353716.18| Human DNA sequence from clone RP11-501I18 on chromosome 6 Contains the TBCC gene for tubulin-specific chaperone c, part of a novel gene, part of the gene for a novel protein (KIAA0240) and CpG islands, complete sequence Length = 98340 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 76537 agctgggtgtggtggtgcttgc 76516
>emb|AL354733.15| Human DNA sequence from clone RP11-575L7 on chromosome 9 Contains the 5' end of the gene for protein kinase anchoring protein GKAP42 (FKSG21), a novel gene (DKFZp43D0917), a novel gene (MGC10999), the HNRPK gene for heterogeneous nuclear ribonucleoprotein K (CSBP, TUNP, HNRNPK), three novel genes, the 5' UTR of a novel gene (FLJ12888) and six CpG islands, complete sequence Length = 189579 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 3572 agctgggtgtggtggtgcttgc 3593
>emb|AL353600.10| Human DNA sequence from clone RP11-90B22 on chromosome 10 Contains the 5' end of the NRP1 gene for neuropilin 1, a novel gene and a CpG island, complete sequence Length = 124540 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 17558 agctgggtgtggtggtgcttgc 17537
>emb|AL162584.9| Human DNA sequence from clone RP11-12A16 on chromosome 9 Contains part of the MAPKAP1 gene for mitogen-activated protein kinase associated protein 1, a novel gene, a heterogeneous nuclear ribonucleoprotein A1 (HNRP1) pseudogene and two CpG islands, complete sequence Length = 160178 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 158517 agctgggtgtggtggtgcttgc 158496
>emb|AL160291.31| Human DNA sequence from clone RP11-85G18 on chromosome 10 Contains the 5' end of the YME1L1 gene for YME1-like 1 (S. cerevisiae), the gene for a novel protein kinase domain containing protein (FLJ14813), the gene for endozepine-related protein precursor (DKFZp434A2417) (FLJ32907 KIAA1996), a novel pseudogene (KIAA0563, FLJ34306), the 5' end of a novel pseudogene (FLJ10376) and six CpG islands, complete sequence Length = 155962 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 77990 agctgggtgtggtggtgcttgc 77969
>emb|AL160266.25| Human DNA sequence from clone RP5-1068F3 on chromosome X, complete sequence Length = 134124 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 133874 agctgggtgtggtggtgcttgc 133853
>emb|AL160401.12| Human DNA sequence from clone RP11-442J1 on chromosome 6 Contains the 3' end of the BAI3 gene for brain-specific angiogenesis inhibitor 3, complete sequence Length = 121606 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 43237 agctgggtgtggtggtgcttgc 43216
>emb|AL158823.11| Human DNA sequence from clone RP11-151F5 on chromosome 9 Contains part of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor protein 2 (paralemmin 2), a ribosomal protein L21 (RPL21) pseudogene and a CpG island, complete sequence Length = 175558 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 3740 agctgggtgtggtggtgcttgc 3719
>gb|AC008083.23| Homo sapiens 12 BAC RP11-493L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192046 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 76552 agctgggtgtggtggtgcttgc 76573
>emb|AL109743.4|HSJ590P13 Human DNA sequence from clone RP4-590P13 on chromosome 1p35.1-36.12 Contains the 3' end of the RPS6KA1 (ribosomal protein S6 kinase, 90kD,polypeptide 1) gene, ESTs, STSs, GSSs and 2 CpG islands, complete sequence Length = 96006 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgct 278 |||||||||||||||||||||| Sbjct: 61089 atcagctgggtgtggtggtgct 61110
>gb|AC007834.40| Homo sapiens 12 BAC RP11-7G5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 210578 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 30286 agctgggtgtggtggtgcttgc 30307 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtg 276 |||||||||||||||||||| Sbjct: 121476 atcagctgggtgtggtggtg 121495
>gb|AC103874.2| Homo sapiens chromosome 15, clone RP11-907B8, complete sequence Length = 158897 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgct 278 |||||||||||||||||||||| Sbjct: 136268 atcagctgggtgtggtggtgct 136289
>gb|AC010519.8| Homo sapiens chromosome 19 clone LLNLR-261D9, complete sequence Length = 46741 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 44969 agctgggtgtggtggtgcttgc 44990
>gb|AC008745.7| Homo sapiens chromosome 19 clone CTD-2571L23, complete sequence Length = 180531 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 2054 agctgggtgtggtggtgcttgc 2075
>gb|AC126696.1| Homo sapiens chromosome 16 clone RP4-536B24, complete sequence Length = 108708 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 37352 agctgggtgtggtggtgcttgc 37373
>gb|AC023232.16| Homo sapiens chromosome 11, clone RP11-793I11, complete sequence Length = 188868 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 78560 agctgggtgtggtggtgcttgc 78581
>dbj|BS000598.1| Pan troglodytes chromosome Y clone:PTB-224I01, complete sequences Length = 153754 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 75640 agctgggtgtggtggtgcttgc 75619
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 22261017 agctgggtgtggtggtgcttgc 22261038 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtg 276 |||||||||||||||||||| Sbjct: 12467894 atcagctgggtgtggtggtg 12467913 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtg 276 |||||||||||||||||||| Sbjct: 11945607 atcagctgggtgtggtggtg 11945588 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtg 276 |||||||||||||||||||| Sbjct: 2275580 atcagctgggtgtggtggtg 2275599 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtg 276 |||||||||||||||||||| Sbjct: 1773746 atcagctgggtgtggtggtg 1773727
>dbj|AK095337.1| Homo sapiens cDNA FLJ38018 fis, clone CTONG2012745, weakly similar to H.sapiens mRNA for Ndr protein kinase Length = 3107 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgct 278 |||||||||||||||||||||| Sbjct: 903 atcagctgggtgtggtggtgct 924
>dbj|AK097944.1| Homo sapiens cDNA FLJ40625 fis, clone THYMU2014068 Length = 2116 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 686 agctgggtgtggtggtgcttgc 707
>gb|AC123981.18| Pan troglodytes clone rp43-130h22, complete sequence Length = 172816 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 61004 agctgggtgtggtggtgcttgc 60983
>gb|AC125391.10| Pan troglodytes clone rp43-115b1, complete sequence Length = 155629 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 128490 agctgggtgtggtggtgcttgc 128469
>gb|AC112249.4| Homo sapiens BAC clone RP11-688H10 from 4, complete sequence Length = 146551 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 90037 agctgggtgtggtggtgcttgc 90058
>gb|AC021439.9| Homo sapiens chromosome 15, clone RP11-484P15, complete sequence Length = 206030 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 84892 agctgggtgtggtggtgcttgc 84871
>gb|AY278439.1| Mus musculus receptor tyrosine kinase gene, 5' flanking region Length = 2380 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 123 agctgggtgtggtggtgcttgc 144
>gb|AC103828.2| Homo sapiens chromosome 11, clone CTD1-2183M20, complete sequence Length = 136372 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 134303 agctgggtgtggtggtgcttgc 134324
>gb|AC092132.2| Homo sapiens chromosome 16 clone RP11-204E4, complete sequence Length = 166533 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgct 278 |||||||||||||||||||||| Sbjct: 16206 atcagctgggtgtggtggtgct 16185
>gb|AC007540.3| Homo sapiens 12q24.1 BAC RPCI11-128P10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174652 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 124013 agctgggtgtggtggtgcttgc 123992 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 253 tttgatcagctgggtgtggtggtgc 277 |||||| |||||||||||||||||| Sbjct: 62343 tttgatgagctgggtgtggtggtgc 62319
>gb|AC036154.17| Homo sapiens chromosome 17, clone RP11-346N15, complete sequence Length = 55100 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 17212 agctgggtgtggtggtgcttgc 17233
>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence Length = 148054 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 20450 agctgggtgtggtggtgcttgc 20429
>gb|AC026639.6| Homo sapiens chromosome 11, clone RP11-4B7, complete sequence Length = 174711 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 gatcagctgggtgtggtggtgc 277 |||||||||||||||||||||| Sbjct: 77465 gatcagctgggtgtggtggtgc 77486
>gb|AC091609.2| Homo sapiens chromosome 1 clone RP11-109I2, complete sequence Length = 183521 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 50774 agctgggtgtggtggtgcttgc 50753
>gb|AC005089.3| Homo sapiens BAC clone CTA-315H11 from 7, complete sequence Length = 177893 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 gatcagctgggtgtggtggtgc 277 |||||||||||||||||||||| Sbjct: 172998 gatcagctgggtgtggtggtgc 173019
>gb|AC163758.3| Pan troglodytes BAC clone CH251-221N15 from chromosome 7, complete sequence Length = 157318 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 12886 agctgggtgtggtggtgcttgc 12907
>emb|AL512624.5|CNS07EFD Human chromosome 14 DNA sequence BAC C-2311B13 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 154078 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 59330 agctgggtgtggtggtgcttgc 59309
>emb|AL929601.4|CNS08CCG Human chromosome 14 DNA sequence Partial sequence from BAC R-244H18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176156 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 122160 agctgggtgtggtggtgcttgc 122181
>gb|AC048387.16| Homo sapiens chromosome 8, clone RP11-465K16, complete sequence Length = 193896 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 129074 agctgggtgtggtggtgcttgc 129095
>gb|AC119193.9| Mus musculus chromosome 7, clone RP24-178L6, complete sequence Length = 162310 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 19169 agctgggtgtggtggtgcttgc 19148
>gb|AC034251.6| Homo sapiens chromosome 5 clone RP3-508I20, complete sequence Length = 144290 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 111254 agctgggtgtggtggtgcttgc 111275
>gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex BAC MMU012K22, complete sequence Length = 174897 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 256 gatcagctgggtgtggtggtgcttgc 281 ||||||||||| |||||||||||||| Sbjct: 148650 gatcagctgggcgtggtggtgcttgc 148675
>gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex BAC MMU007H18, complete sequence Length = 215614 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 256 gatcagctgggtgtggtggtgcttgc 281 ||||||||||| |||||||||||||| Sbjct: 99998 gatcagctgggcgtggtggtgcttgc 100023
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.58 Identities = 40/46 (86%) Strand = Plus / Plus Query: 616 gagggtgcccttgcagtggtggcacctgaagcaggccttgtggtag 661 |||||| |||||||||||| |||| ||||||| | |||||||||| Sbjct: 25759414 gagggtccccttgcagtggctgcacttgaagcatgtcttgtggtag 25759459 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 gtgcaccctccatggcagca 345 |||||||||||||||||||| Sbjct: 7027365 gtgcaccctccatggcagca 7027384
>dbj|AP000280.3| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:CMP21-S12, complete sequence Length = 73687 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 56296 agctgggtgtggtggtgcttgc 56275
>gb|AC127430.4| Homo sapiens chromosome 3 clone CTD-2563A18, complete sequence Length = 181750 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 152508 agctgggtgtggtggtgcttgc 152487
>gb|AC018638.5|AC018638 Homo sapiens chromosome 7 clone RP11-274B21, complete sequence Length = 176875 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgct 278 |||||||||||||||||||||| Sbjct: 23060 atcagctgggtgtggtggtgct 23081
>gb|AC106796.3| Homo sapiens chromosome 16 clone RP11-429K17, complete sequence Length = 168892 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgct 278 |||||||||||||||||||||| Sbjct: 29255 atcagctgggtgtggtggtgct 29276
>dbj|AP000039.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 10/28, complete sequence Length = 100000 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 42352 agctgggtgtggtggtgcttgc 42331
>gb|AC024952.4|AC024952 Homo sapiens chromosome 7 clone RP11-66F23, complete sequence Length = 182426 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgct 278 |||||||||||||||||||||| Sbjct: 49534 atcagctgggtgtggtggtgct 49513
>gb|AC121343.6| Homo sapiens X BAC RP11-438J7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164000 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 16697 agctgggtgtggtggtgcttgc 16718
>gb|AC011302.3|AC011302 Homo sapiens BAC clone RP11-333E9 from Y, complete sequence Length = 178137 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 166348 agctgggtgtggtggtgcttgc 166327
>gb|AC022013.3|AC022013 Homo sapiens chromosome 3 clone RP11-83C2 map 3, complete sequence Length = 169258 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 90817 agctgggtgtggtggtgcttgc 90796
>gb|AC018507.3|AC018507 Homo sapiens chromosome 3 clone RP11-66L17 map 3, complete sequence Length = 173728 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 122498 agctgggtgtggtggtgcttgc 122477
>emb|AL590763.2|HSXDPB Homo sapiens chromosome X sequence from 6 PACs 1 BAC and 1 cosmid, region GJB1-DXS559 map Xq13.1, complete sequence Length = 248968 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 67394 agctgggtgtggtggtgcttgc 67373
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 44.1 bits (22), Expect = 0.58 Identities = 40/46 (86%) Strand = Plus / Plus Query: 616 gagggtgcccttgcagtggtggcacctgaagcaggccttgtggtag 661 |||||| |||||||||||| |||| ||||||| | |||||||||| Sbjct: 162090 gagggtccccttgcagtggctgcacttgaagcatgtcttgtggtag 162135
>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G03 Length = 106401 Score = 44.1 bits (22), Expect = 0.58 Identities = 40/46 (86%) Strand = Plus / Plus Query: 616 gagggtgcccttgcagtggtggcacctgaagcaggccttgtggtag 661 |||||| |||||||||||| |||| ||||||| | |||||||||| Sbjct: 6020 gagggtccccttgcagtggctgcacttgaagcatgtcttgtggtag 6065
>dbj|BS000129.1| Pan troglodytes chromosome 22 clone:PTB-242K04, map 22, complete sequences Length = 30054 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 14753 agctgggtgtggtggtgcttgc 14774
>dbj|AP001741.1| Homo sapiens genomic DNA, chromosome 21q, section 85/105 Length = 39322 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 35380 agctgggtgtggtggtgcttgc 35401
>dbj|AK130845.1| Homo sapiens cDNA FLJ27335 fis, clone TMS09309 Length = 1313 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 1167 agctgggtgtggtggtgcttgc 1188
>gb|AC003071.1|AC003071 Homo sapiens BAC clone CTA-85E5 from 22q12.1-qter, complete sequence Length = 150228 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 57890 agctgggtgtggtggtgcttgc 57869
>gb|AC005074.1|AC005074 Homo sapiens BAC clone CTA-208H19 from 7q11.23, complete sequence Length = 50604 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 gatcagctgggtgtggtggtgc 277 |||||||||||||||||||||| Sbjct: 14179 gatcagctgggtgtggtggtgc 14200
>emb|AL391262.3|CNS06C86 Human chromosome 14 DNA sequence BAC R-817G13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171296 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 31294 agctgggtgtggtggtgcttgc 31315
>gb|AC122197.4| Mus musculus BAC clone RP23-55A6 from 10, complete sequence Length = 232763 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 252 ctttgatcagctgggtgtggtggtgc 277 ||||||| |||||||||||||||||| Sbjct: 29502 ctttgattagctgggtgtggtggtgc 29527
>emb|AL359317.3|CNS05TDQ Human chromosome 14 DNA sequence BAC R-363J20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 208222 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 3870 agctgggtgtggtggtgcttgc 3849
>dbj|AP000237.3| Homo sapiens genomic DNA, chromosome 21 clone:RP11-269P7, complete sequence Length = 153265 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 10431 agctgggtgtggtggtgcttgc 10410
>gb|AC006227.1|AC006227 Homo sapiens, clone hRPK.16_A_1, complete sequence Length = 153337 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 141487 agctgggtgtggtggtgcttgc 141508
>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105 Length = 340000 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 107489 agctgggtgtggtggtgcttgc 107468
>dbj|AP001706.1| Homo sapiens genomic DNA, chromosome 21q, section 50/105 Length = 340000 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 37650 agctgggtgtggtggtgcttgc 37629
>dbj|AP002495.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2313N18, complete sequence Length = 131570 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 52463 agctgggtgtggtggtgcttgc 52484
>gb|AC005725.1|AC005725 Homo sapiens chromosome 17, clone hRPK.680_C_21, complete sequence Length = 197915 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 29850 agctgggtgtggtggtgcttgc 29871
>gb|AC004242.1|AC004242 Homo sapiens 12q13 PAC RPCI1-316M24 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 104913 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 76738 agctgggtgtggtggtgcttgc 76717
>emb|AL355433.6|HS179D22 Homo sapiens chromosome 9 BAC RP11-179D22, complete sequence Length = 177219 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 64433 agctgggtgtggtggtgcttgc 64454
>gb|AC150597.4| Aotus nancymaae clone CH258-191N23, complete sequence Length = 97432 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 90379 agctgggtgtggtggtgcttgc 90358
>dbj|AP000529.1| Homo sapiens genomic DNA, chromosome 22q11.2, Cat Eye Syndrome region, clone:c3G11 Length = 37981 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 24305 agctgggtgtggtggtgcttgc 24284
>dbj|AP000198.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B355D16-T1073, segment 4/8, complete sequence Length = 100000 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 1343 agctgggtgtggtggtgcttgc 1364
>dbj|AP000344.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1269D1 Length = 186421 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 9213 agctgggtgtggtggtgcttgc 9192
>dbj|AP000343.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB282B12 Length = 111249 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 89547 agctgggtgtggtggtgcttgc 89526
>dbj|AP000183.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 10/21, complete sequence Length = 100000 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 48328 agctgggtgtggtggtgcttgc 48307
>dbj|AP000107.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 10/20, complete sequence Length = 100000 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 48328 agctgggtgtggtggtgcttgc 48307
>dbj|AP001611.2| Homo sapiens genomic DNA, chromosome 21, clone:P1104C7, MX1-D21S171 region, complete sequence Length = 4601 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 673 agctgggtgtggtggtgcttgc 694
>dbj|AP000094.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, B335D16-P10G11 region, segment 4/7 Length = 100000 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 1343 agctgggtgtggtggtgcttgc 1364
>dbj|AP003717.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-167N4, complete sequences Length = 156370 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 46242 agctgggtgtggtggtgcttgc 46263
>dbj|AP003531.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-535C12, complete sequences Length = 199384 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 183785 agctgggtgtggtggtgcttgc 183806
>dbj|AP000915.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-720L2, complete sequences Length = 188439 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agctgggtgtggtggtgcttgc 281 |||||||||||||||||||||| Sbjct: 25474 agctgggtgtggtggtgcttgc 25453
>gb|AC170422.1| Rhesus Macaque BAC CH250-106F22 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 185455 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 3187 atcagctgggtgtggtggtgc 3167
>gb|AC110880.10| Mus musculus chromosome 7, clone RP24-456G3, complete sequence Length = 162685 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 gctgggtgtggtggtgcttgc 281 ||||||||||||||||||||| Sbjct: 64754 gctgggtgtggtggtgcttgc 64774
>gb|AF109907.1|DJ534K4 Homo sapiens S164 gene, partial cds; PS1 and hypothetical protein genes, complete cds; and S171 gene, partial cds Length = 216387 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 118810 atcagctgggtgtggtggtgc 118830
>gb|AC005179.1| Homo sapiens chromosome 5, P1 clone 1041F10 (LBNL H88), complete sequence Length = 59765 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 5064 atcagctgggtgtggtggtgc 5044
>ref|NG_002433.1| Homo sapiens major histocompatibility complex, class II, DR53 haplotype (DR53) on chromosome 6 Length = 150447 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 148636 atcagctgggtgtggtggtgc 148656
>gb|AY735566.1| Arabidopsis thaliana hypothetical protein AT1G75150 mRNA, complete cds Length = 2757 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 ccgagtcttcatcatccactg 191 ||||||||||||||||||||| Sbjct: 1824 ccgagtcttcatcatccactg 1844
>gb|AC154431.2| Mus musculus BAC clone RP23-174B22 from chromosome 13, complete sequence Length = 195030 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 774 atcagctgggtgtggtggtgc 794
>gb|AC164703.3| Mus musculus BAC clone RP23-266K19 from chromosome 7, complete sequence Length = 238433 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttg 280 ||||||||||||||||||||| Sbjct: 84809 agctgggtgtggtggtgcttg 84829
>gb|AC150919.6| Bos taurus BAC CH240-303F16 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 160376 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 aataacatttttgtctttggaaatg 54 ||||||||| ||||||||||||||| Sbjct: 19729 aataacattcttgtctttggaaatg 19753
>ref|XM_322143.1| Neurospora crassa OR74A hypothetical protein (NCU00058.1) partial mRNA Length = 4164 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 335 ccatggcagcatttgaagcagctct 359 ||||||| ||||||||||||||||| Sbjct: 527 ccatggctgcatttgaagcagctct 551
>ref|XM_950708.1| Neurospora crassa OR74A hypothetical protein (NCU00058.1) partial mRNA Length = 4164 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 335 ccatggcagcatttgaagcagctct 359 ||||||| ||||||||||||||||| Sbjct: 527 ccatggctgcatttgaagcagctct 551
>gb|AC149133.1| Pan troglodytes chromosome X clone RP43-010O16 map human ortholog p11.23 complete sequence Length = 179327 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 59227 atcagctgggtgtggtggtgc 59247
>gb|AC158789.4| Mus musculus chromosome 5, clone RP23-192C21, complete sequence Length = 218871 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 122115 atcagctgggtgtggtggtgc 122135
>gb|AY585721.1| Homo sapiens CDC7 cell division cycle 7 (S. cerevisiae) (CDC7) gene, complete cds Length = 28768 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 17968 atcagctgggtgtggtggtgc 17988
>gb|AY663410.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA00576 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*030302 allele and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0302 allele, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 105171 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 91961 atcagctgggtgtggtggtgc 91941
>gb|AY663404.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10540 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*030302 allele and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0302 allele, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 109441 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 97255 atcagctgggtgtggtggtgc 97235
>gb|AY663393.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14661 MHC class II antigen (HLA-DQB1) gene and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0303 allele, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 78546 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 71139 atcagctgggtgtggtggtgc 71119
>gb|AC160652.2| Pan troglodytes BAC clone CH251-490H15 from chromosome 6, complete sequence Length = 169342 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 68083 atcagctgggtgtggtggtgc 68103
>gb|AC073221.9| Homo sapiens BAC clone RP11-543D8 from 7, complete sequence Length = 94027 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 61160 atcagctgggtgtggtggtgc 61140
>gb|AC005160.1| Homo sapiens BAC clone GS1-572E2 from 7, complete sequence Length = 127178 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 115040 atcagctgggtgtggtggtgc 115060
>gb|AC146089.2| Pan troglodytes BAC clone RP43-47D18 from 7, complete sequence Length = 178573 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 51198 atcagctgggtgtggtggtgc 51218
>emb|CT025531.9| Mouse DNA sequence from clone RP23-280C13 on chromosome 9, complete sequence Length = 206038 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttg 280 ||||||||||||||||||||| Sbjct: 160899 agctgggtgtggtggtgcttg 160919
>gb|AC146204.3| Pan troglodytes BAC clone RP43-25M3 from 7, complete sequence Length = 188265 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 101757 atcagctgggtgtggtggtgc 101737
>gb|AC004382.1|HUAC004382 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-152E5, complete sequence Length = 217873 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 25010 atcagctgggtgtggtggtgc 25030
>gb|AC002400.1|HUAC002400 Human Chromosome 16 BAC clone CIT987SK-A-735G6, complete sequence Length = 138839 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 90117 atcagctgggtgtggtggtgc 90097
>gb|AC002045.1|HUAC002045 Human Chromosome 16 BAC clone CIT987SK-A-589H1, complete sequence Length = 124048 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 13471 atcagctgggtgtggtggtgc 13491
>gb|AC103810.5| Homo sapiens chromosome 17, clone RP11-927P21, complete sequence Length = 203192 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 5621 atcagctgggtgtggtggtgc 5601
>gb|AC091296.3| Pan troglodytes clone RP43-109G19, complete sequence Length = 185979 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 42350 atcagctgggtgtggtggtgc 42330
>gb|AC073310.7| Homo sapiens BAC clone RP11-49G5 from 7, complete sequence Length = 125685 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 34379 atcagctgggtgtggtggtgc 34359
>gb|AC006000.3| Homo sapiens PAC clone RP4-741M6 from 7, complete sequence Length = 124170 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 34677 atcagctgggtgtggtggtgc 34657
>gb|AC117805.8| Mus musculus chromosome 19, clone RP24-565L9, complete sequence Length = 156701 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 gctgggtgtggtggtgcttgc 281 ||||||||||||||||||||| Sbjct: 92340 gctgggtgtggtggtgcttgc 92360
>gb|AC006088.1| Homo sapiens 12q24.1 PAC RP1-305I20 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 122605 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 63413 atcagctgggtgtggtggtgc 63393
>gb|AC158340.9| Mus musculus chromosome 1, clone RP24-161N8, complete sequence Length = 163123 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 142328 atcagctgggtgtggtggtgc 142308
>gb|AC183690.3| Cavia porcellus clone CH234-212D11, complete sequence Length = 108490 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 10234 atcagctgggtgtggtggtgc 10214
>gb|AC102781.5| Mus musculus chromosome 1, clone RP23-271G2, complete sequence Length = 198393 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 107220 atcagctgggtgtggtggtgc 107240
>gb|AC012184.7| Homo sapiens chromosome 16 clone RP11-529K1, complete sequence Length = 196010 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgcttgc 281 |||||||||| |||||||||||||| Sbjct: 105841 atcagctgggcgtggtggtgcttgc 105865
>emb|Z98051.7|HS501A4 Human DNA sequence from clone RP3-501A4 on chromosome Xp11.1-11.22 Contains part of the gene for a novel protein similar to PHD finger protein 2 PHF2, complete sequence Length = 7570 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 5630 atcagctgggtgtggtggtgc 5650
>emb|Z82178.2|HSB79B4 Human DNA sequence from clone SC22CB-79B4 on chromosome 22, complete sequence Length = 43748 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 23633 atcagctgggtgtggtggtgc 23613
>emb|AL772197.12| Human DNA sequence from clone RP11-24O6 on chromosome X Contains the 5' end of the SH3KBP1 gene for SH3-domain kinase binding protein 1 (CIN85), two novel genes and one CpG island, complete sequence Length = 106342 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 24044 atcagctgggtgtggtggtgc 24024
>emb|AL731566.7| Human DNA sequence from clone RP11-500G22 on chromosome 10 Contains the 5' end of the ATE1 gene for arginyltransferase 1, a novel gene, the gene for a novel protein (FLJ20003), the 5' end of the TACC2 gene for transforming, acidic coiled-coil containing protein 2 (AZU-1) and three CpG islands, complete sequence Length = 125922 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 89530 atcagctgggtgtggtggtgc 89510
>emb|AL844527.6| Human DNA sequence from clone DAQB-314F24 on chromosome 6 Contains the 5' end of the COL11A2 gene for collagen type XI alpha 2, the RXRB gene for retinoid X receptor, beta, the SLC39A7 gene for solute carrier family 39 (zinc transporter), member 7, the HSD17B8 gene for hydroxysteroid (17-beta) dehydrogenase 8, the RING1 gene for ring finger protein 1, the ZNF314P pseudogene for zinc finger protein 314, the HTATSF1P pseudogene for HIV TAT specific factor 1, the HCG25 gene for HLA complex group 25, the VPS52 gene for vacuolar protein sorting 52 (yeast), the RPS18 gene for ribosomal protein S18, the B3GALT4 gene for UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4, the 3'end of the C6orf11 gene for chromosome 6 open reading frame 11, and 7 CpG islands, complete sequence Length = 109523 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 52589 atcagctgggtgtggtggtgc 52609
>emb|BX296568.4| Human DNA sequence from clone DASS-233C19 on chromosome 6, complete sequence Length = 87738 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 61319 atcagctgggtgtggtggtgc 61339
>emb|BX248408.4| Human DNA sequence from clone DASS-63A3 on chromosome 6, complete sequence Length = 61953 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 10518 atcagctgggtgtggtggtgc 10538
>emb|AL732326.4| Human DNA sequence from clone RP11-723P2 on chromosome X Contains the PDHA1 gene for pyruvate dehydrogenase (lipoamide) alpha 1, the 3' end of the gene for a novel protein similar to mitogen-activated protein kinase kinase kinase 5 (MAP3K5) and a CpG island, complete sequence Length = 158420 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 143982 atcagctgggtgtggtggtgc 143962
>emb|AL672040.10| Human DNA sequence from clone RP11-449L4 on chromosome X, complete sequence Length = 117297 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 75959 atcagctgggtgtggtggtgc 75939
>emb|AL607042.10| Human DNA sequence from clone RP11-413G1 on chromosome 10, complete sequence Length = 53085 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 10419 atcagctgggtgtggtggtgc 10439
>emb|AL713971.7| Human DNA sequence from clone XXbac-269C15 on chromosome 6 contains the FABGL gene for hydroxysteroid (17-beta) dehydrogenase 8, the RING1 gene for ring finger protein 1, a zinger finger protein pseudogene, a HIV TAT specific factor 1 (HTATSF1) pseudogene, a novel transcript, the SACML2 gene for SAC2 suppressor of actin mutations 2-like (yeast), the 5' end of the RPS18 gene for ribosomal protein S18 and four CpG islands, complete sequence Length = 70621 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 19778 atcagctgggtgtggtggtgc 19798
>emb|AL645940.4| Human DNA sequence from clone XXbac-157A10 on chromosome 6 contains the 3' end of the gene for a novel protein similar to major histocompatibility complex, class II, DP beta 2 pseudogene, a major histocompatibility complex, class II, DP beta 1 pseudogene, two putative novel transcripts, the COL11A2 gene for collagen, type XI, alpha 2, the RXRB gene for retinoid X receptor, beta, the HKE4 gene for HLA-class II region expressed gene KE4, the FABGL gene for hydroxysteroid (17-beta) dehydrogenase 8, the RING1 gene for ring finger protein 1, a zinger finger protein pseudogene, a HIV TAT specific factor 1 (HTATSF1) pseudogene, a novel transcript, the SACM2L gene for SAC2 suppressor of actin mutations 2-like (yeast), the 5' end of the RPS18 gene for ribosomal protein S18 and six CpG islands, complete sequence Length = 158033 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 109157 atcagctgggtgtggtggtgc 109177
>emb|AL591806.16| Human DNA sequence from clone RP11-544M22 on chromosome 1 Contains the 3' end of a novel gene, the 5' end of the ITLN2 gene for intelectin 2, the F11R gene for F11 receptor, the gene for KAT protein, the USF1 gene for upstream transcription factor 1, the gene for a novel protein, the PVRL4 gene for poliovirus receptor-related 4, a novel gene, the gene for a novel protein (MGC33338), the PFDN2 gene for prefoldin 2, the NIT1 gene for nitrilase 1 and the DEDD gene for death effector domain containing, complete sequence Length = 200822 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 132477 atcagctgggtgtggtggtgc 132457
>emb|AL592295.25| Human DNA sequence from clone RP11-122G18 on chromosome 1 Contains the 3' end of a novel gene, the MPZ gene for myelin protein zero (Charcot-Marie-Tooth neuropathy 1B), the SDHC gene for succinate dehydrogenase complex subunit C integral membrane protein 15kDa, the gene for a novel protein, a novel gene, a pseudogene similar to part of ribonucleotide reductase M2 polypeptide (RRM2), a ribosomal protein S2 (RPS2) pseudogene and two CpG islands, complete sequence Length = 162189 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 95086 atcagctgggtgtggtggtgc 95066
>emb|AL591431.8| Human DNA sequence from clone RP11-1057F13 on chromosome Xq21.1-21.2 Contains the 5' end of a novel pseudogene, gene MGC26999 and a CpG island, complete sequence Length = 151017 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 39862 atcagctgggtgtggtggtgc 39842
>emb|AL596342.3| Human DNA sequence from clone RP11-198A7 on chromosome 1 Contains the 5' end of the RGS18 gene for regulator of G-protein signalling 18, complete sequence Length = 154968 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 138997 atcagctgggtgtggtggtgc 138977
>emb|AL590666.8| Human DNA sequence from clone RP11-66D17 on chromosome 1 Contains the 3' end of the SH2D2A gene for SH2 domain protein 2A, the PRCC gene for papillary renal cell carcinoma (translocation-associated), the HDGF gene for hepatoma-derived growth factor (high-mobility group protein 1-like), the MRPL24 gene for mitochondrial ribosomal protein L24, the gene for CGI-41 protein (CGI-41), a novel gene (FLJ12671), a novel gene, the CRABP2 gene for cellular retinoic acid binding protein 2, a novel gene, the gene for NES nestin, the 5' end of a novel gene, the 3' end of the BCAN gene for brevican and 5 CpG islands, complete sequence Length = 160597 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 142750 atcagctgggtgtggtggtgc 142730
>emb|AL589723.7| Human DNA sequence from clone RP11-204B7 on chromosome 6 Contains the TPMT gene for thiopurine S-methyltransferase, the gene for a novel protein similar to (TAT-interactive protein, 72-KD; tripartite motif protein TRIM32; zinc-finger protein HT2A), complete sequence Length = 147927 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 31598 atcagctgggtgtggtggtgc 31578
>gb|AC183921.2| Pan troglodytes BAC clone CH251-617M1 from chromosome unknown, complete sequence Length = 188195 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 122959 atcagctgggtgtggtggtgc 122939
>emb|AL513526.19| Human DNA sequence from clone RP11-14N7 on chromosome 1 Contains the 3' end of a myeloid/lymphoid or mixed-lineage leukemia 3 (MLL3) pseudogene, a seven transmembrane helix receptor pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 57598 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 45337 atcagctgggtgtggtggtgc 45317
>emb|AL451165.19| Human DNA sequence from clone RP11-140K17 on chromosome 6 Contain the 5' end of gene FLJ32402, an H+ transporting lysosomal ATPase (vacuolar proton pump) 14kD (ATP6S14) pseudogene and a CpG island, complete sequence Length = 38833 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 24040 atcagctgggtgtggtggtgc 24020
>emb|AL450998.19| Human DNA sequence from clone RP11-169K16 on chromosome 1 Contains the 3' end of the gene for a novel RUN and PH domain-containing protein (KIAA0842), the 5' end of a novel gene, two genes for a novel proteins, a novel gene, the gene for filamin-binding LIM protein-1 (FBLP-1), a ribosomal protein L12 (RPL12) pseudogene, a ubiquinol-cytochrome c reductase hinge protein (UQCRH) pseudogene, a ribosomal protein S16 (RPS16) pseudogene, a novel gene (FLJ42024), the 5' end of the gene for SMART/HDAC1 associated repressor protein (SHARP) and three CpG islands, complete sequence Length = 163108 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 140927 atcagctgggtgtggtggtgc 140947
>emb|AL512329.17| Human DNA sequence from clone RP11-157J24 on chromosome 6 Contains a E74-like factor 2 (ets domain transcription factor) (ELF2) pseudogene, complete sequence Length = 72333 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 6033 atcagctgggtgtggtggtgc 6013
>emb|AL512268.10| Human DNA sequence from clone RP11-477A22 on chromosome X Contains a CpG island, complete sequence Length = 26359 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 7009 atcagctgggtgtggtggtgc 7029
>emb|AL513220.9| Human DNA sequence from clone RP11-566C13 on chromosome 1 Contains the 5' end of the gene for nucleolar GTPase (HUMAUANTIG), the gene for a novel protein (FLJ40906) and a CpG island, complete sequence Length = 94638 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 37218 atcagctgggtgtggtggtgc 37198
>emb|AL451083.5| Human DNA sequence from clone RP11-286F20 on chromosome 1 Contains a novel gene (KIAA1383) and a CpG island, complete sequence Length = 98078 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 38345 atcagctgggtgtggtggtgc 38325
>emb|AL451107.6| Human DNA sequence from clone RP11-14C22 on chromosome 10 Contains the gene for a novel protein similar to lysozyme C-1 (1 4-beta-N-acylmuramidase C EC 3.2.1.17) (MGC33408), three novel genes and a supervillin pseudogene (SVIL), complete sequence Length = 172779 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 117827 atcagctgggtgtggtggtgc 117807
>emb|AL445704.18| Human DNA sequence from clone RP11-99F4 on chromosome 1 Contains the 5' end of a novel gene (FLJ40773) and a CpG island, complete sequence Length = 163621 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 57845 atcagctgggtgtggtggtgc 57865
>emb|AL391827.18| Human DNA sequence from clone RP11-63G20 on chromosome 10 Contains the 5' end of a novel gene (FLJ13114 FLJ40653) and two CpG islands, complete sequence Length = 183430 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 41408 atcagctgggtgtggtggtgc 41388
>emb|AL391497.9| Human DNA sequence from clone RP11-302M6 on chromosome 1 Contains the 3' end of the LRRC5 gene for leucine rich repeat containing 5, a two novel genes, a novel pseudogene, the 5' end of a novel gene (FLJ20403) and a CpG island, complete sequence Length = 189762 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 143487 atcagctgggtgtggtggtgc 143507
>emb|AL391121.29| Human DNA sequence from clone RP11-47A8 on chromosome 10 Contains the 3' end of the SUFU gene for suppressor of fused homolog (Drosophila), the TRIM8 gene for tripartite motif-containing 8, the ARL3 gene for ADP-ribosylation factor-like 3, the SFXN2 gene for sideroflexin 2 and three CpG islands, complete sequence Length = 166600 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 47768 atcagctgggtgtggtggtgc 47788
>emb|AL365444.11| Human DNA sequence from clone RP11-115P16 on chromosome 1 Contains the 3' UTR of a novel gene (DKFZp761P211), the ITPKB gene for inositol 1,4,5-trisphosphate 3-kinase B, two novel genes, a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene and a CpG island, complete sequence Length = 181144 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 65499 atcagctgggtgtggtggtgc 65519
>emb|AL359267.37| Human DNA sequence from clone RP11-384P3 on chromosome 10 Contains the 5' end of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G), complete sequence Length = 119526 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 agctgggtgtggtggtgcttg 280 ||||||||||||||||||||| Sbjct: 58944 agctgggtgtggtggtgcttg 58964
>emb|AL357556.18| Human DNA sequence from clone RP11-517I24 on chromosome 1 Contains a dentatorubral-pallidoluysian atrophy (atrophin-1) (DRPLA) processed pseudogene and the 5' end of the TBCE gene for tubulin-specific chaperone e protein, complete sequence Length = 51407 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 13950 atcagctgggtgtggtggtgc 13930
>emb|AL358117.11| Human DNA sequence from clone RP11-325K2 on chromosome 9 Contains a CpG island, complete sequence Length = 54787 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 17630 atcagctgggtgtggtggtgc 17610
>emb|AL359074.12| Human DNA sequence from clone RP11-137L10 on chromosome 10 Contains the 5' end of the PPP3CB gene for protein phosphatase 3 (formerly 2B) catalytic subunit beta isoform (calcineurin A beta), two novel genes (FLJ37318), the 3' end of a novel gene, a ribosomal protein S26 (RPS26) pseudogene and a CpG island, complete sequence Length = 152161 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 76419 atcagctgggtgtggtggtgc 76439
>emb|AL355598.26| Human DNA sequence from clone RP11-435O11 on chromosome 10 Contains the EIF3S10 gene for eukaryotic translation initiation factor 3, subunit 10 theta, 150/170kDa, the gene for a novel protein similar to uncharacterized hypothalamus protein HT011, the 3' end of a novel gene and three CpG islands, complete sequence Length = 128228 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 35135 atcagctgggtgtggtggtgc 35115
>emb|AL356133.17| Human DNA sequence from clone RP11-337A23 on chromosome 9 Contains a novel gene (FLJ13657), the PLAA gene for phospholipase A2-activating protein (PLAP), a novel gene, the 5' end of capillary morphogenesis protein 1 (CMG-1, FLJ22621)(CMG1) and 3 CpG islands, complete sequence Length = 187805 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 26887 atcagctgggtgtggtggtgc 26907
>emb|AL355871.6| Human DNA sequence from clone RP11-47K11 on chromosome 1p21.3-22.3 Contains the CDC7 gene for CDC7 cell division cycle 7 (S. cerevisiae) and a novel pseudogene, complete sequence Length = 44564 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 17409 atcagctgggtgtggtggtgc 17429
>emb|AL355390.4| Human DNA sequence from clone RP11-512C24 on chromosome 13 Contains a 60S ribosomal protein 21 (RPL21) pseudogene and a novel gene, complete sequence Length = 158951 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 99284 atcagctgggtgtggtggtgc 99304
>emb|AL158076.20| Human DNA sequence from clone RP11-350G13 on chromosome 9q21.32-22.32 Contains a laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) pseudogene and a CpG island, complete sequence Length = 114420 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 47329 atcagctgggtgtggtggtgc 47309
>emb|AL161912.15| Human DNA sequence from clone RP11-403N16 on chromosome 9 Contains a novel pseudogene and a novel gene, complete sequence Length = 102624 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 86761 atcagctgggtgtggtggtgc 86741
>emb|AL159977.10| Human DNA sequence from clone RP11-428O18 on chromosome 13 Contains the RPL21 gene for ribosomal protein L21 (60S ribosomal protein L21, L21), a novel gene for a Ras family protein similar to 1110065D03RIK, a novel gene, the 5' end of novel gene and two CpG islands, complete sequence Length = 173965 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 145046 atcagctgggtgtggtggtgc 145066
>emb|AL139405.11| Human DNA sequence from clone RP11-393E10 on chromosome 10 Contains the 5' end of a variant of the gene for a novel protein (FLJ10210) and the 3' end of the gene for a novel protein (MGC11034), complete sequence Length = 179829 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 142879 atcagctgggtgtggtggtgc 142859
>emb|AL138894.11| Human DNA sequence from clone RP11-28O4 on chromosome 9 Contains the 5' end of the DBCCR1 gene for deleted in bladder cancer chromosome region candidate 1 (IB3089A) and a CpG island, complete sequence Length = 152366 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 122958 atcagctgggtgtggtggtgc 122938
>emb|AL136526.27| Human DNA sequence from clone RP11-151A6 on chromosome 13q32.21-33.3 Contains the 3' end of the PCCA gene for propionyl Coenzyme A carboxylase alpha polypeptide, the 3' end of a novel gene, a novel gene for a protein similar to ribosomal protein 26, the 3' end of a novel gene, a novel gene and a CpG island, complete sequence Length = 179804 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 115289 atcagctgggtgtggtggtgc 115309
>emb|AL137074.17| Human DNA sequence from clone RP11-476B13 on chromosome 9 Contains the 5' end of the C9orf12 gene for chromosome 9 open reading frame 12, a ribosomal protein L21 (RPL21) pseudogene, the 3' end of the gene for coiled-coil protein (BICD2) (KIAA0699) and three CpG islands, complete sequence Length = 83039 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 57797 atcagctgggtgtggtggtgc 57777
>gb|AC127025.7| Homo sapiens chromosome 17, clone CTD-2646J6, complete sequence Length = 141061 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 107663 atcagctgggtgtggtggtgc 107683
>emb|AL137060.13| Human DNA sequence from clone RP11-34F20 on chromosome 13 Contains the 3' end of the RFP2 gene for ret finger protein 2, the DLEU2 gene for deleted in lymphocytic leukemia 2 (LEU2 BCMSUN), the 5' end of the DLEU1 gene for deleted in lymphocytic leukemia 1 (BCMS LEU1), a ribosomal protein L18 (RPL18) pseudogene, a novel gene and four CpG islands, complete sequence Length = 154887 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 24770 atcagctgggtgtggtggtgc 24790
>emb|AL136358.13| Human DNA sequence from clone RP11-183L8 on chromosome 13 Contains the 5' end of the LHFP gene for lipoma HMGIC fusion partner and a CpG island, complete sequence Length = 120507 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 43437 atcagctgggtgtggtggtgc 43457
>emb|AL136231.12| Human DNA sequence from clone RP11-6J24 on chromosome 9p24.1-24.3 Contains the 3' end of the SLC1A1 gene for solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), the 5' end of a novel gene (FLJ10058), the gene for Hsp90-associating relative of Cdc37 (HARC) (FLJ20639), the 3' end of the AK3L1 gene for adenylate kinase 3 like 1 (AK3), a ribosomal protein S6 (RPS6) pseudogene and 3 CpG islands, complete sequence Length = 160012 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 115138 atcagctgggtgtggtggtgc 115158
>emb|AL137022.8| Human DNA sequence from clone RP11-344A7 on chromosome 9p21.2-22.3 Contains the 5' end of a novel gene, a histone H3 pseudogene, and a CpG island, complete sequence Length = 169854 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 94124 atcagctgggtgtggtggtgc 94104
>emb|AL121991.50|HSDJ675E8 Human DNA sequence from clone RP4-675E8 on chromosome 1p34.1-35.3 Contains the 3' end of EIF3S2 gene for eukaryotic translation initiation factor 3, subunit 2 beta, the LCK gene for lymphocyte-specific protein tyrosine kinase, a novel gene, a novel gene (MGC10820) and two CpG islands, complete sequence Length = 61515 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 37923 atcagctgggtgtggtggtgc 37943
>gb|AC026366.20| Homo sapiens 12 BAC RP11-139O18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164429 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 164364 atcagctgggtgtggtggtgc 164384
>emb|AL133346.10| Human DNA sequence from clone RP1-215F14 on chromosome 6q22.31-23.3, complete sequence Length = 52920 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 41818 atcagctgggtgtggtggtgc 41798
>emb|AL133387.8| Human DNA sequence from clone RP11-107I14 on chromosome 10 Contains the 3' end of a novel gene, three novel genes (FLJ34886), the 5' end of the BTRC gene for beta-transducin repeat containing and four CpG islands, complete sequence Length = 157912 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atcagctgggtgtggtggtgc 277 ||||||||||||||||||||| Sbjct: 18812 atcagctgggtgtggtggtgc 18792 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,312,112 Number of Sequences: 3902068 Number of extensions: 6312112 Number of successful extensions: 238673 Number of sequences better than 10.0: 897 Number of HSP's better than 10.0 without gapping: 900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 231851 Number of HSP's gapped (non-prelim): 6795 length of query: 668 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 645 effective length of database: 17,143,297,704 effective search space: 11057427019080 effective search space used: 11057427019080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
