ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20n21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1tpg|BK001566.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 361 2e-96
2dbj|AK103788.1| Oryza sativa (japonica cultivar-group) cDNA clon... 361 2e-96
3dbj|AK101129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 361 2e-96
4ref|XM_472718.1| Oryza sativa (japonica cultivar-group), predic... 359 7e-96
5emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4,... 274 3e-70
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 274 3e-70
7gb|AY596573.1| Saccharum officinarum clone SCCCLR1C01D11, comple... 258 2e-65
8gb|AY107167.1| Zea mays PCO149856 mRNA sequence 224 3e-55
9ref|XM_466380.1| Oryza sativa (japonica cultivar-group), mRNA 143 8e-31
10dbj|AK059246.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 8e-31
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
12dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
13gb|AY111811.1| Zea mays CL5517_1 mRNA sequence 56 1e-04
14gb|AY596560.1| Saccharum officinarum clone SCUTLR1037C12, comple... 54 6e-04
15ref|XM_479197.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.035
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
17dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
18dbj|AK063642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.035
19ref|NM_179197.1| Arabidopsis thaliana unknown protein AT4G39860 ... 44 0.55
20ref|NM_120149.2| Arabidopsis thaliana unknown protein AT4G39860 ... 44 0.55
21gb|AY117286.1| Arabidopsis thaliana unknown protein (At4g39860) ... 44 0.55
22gb|AY063865.1| Arabidopsis thaliana unknown protein (At4g39860) ... 44 0.55
23ref|NM_127793.3| Arabidopsis thaliana unknown protein AT2G22270 ... 42 2.2
24gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genom... 42 2.2
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.2
26emb|AL355980.6| Human DNA sequence from clone RP11-295L12 on chr... 42 2.2
27gb|AC007168.5| Arabidopsis thaliana chromosome 2 clone T26C19 ma... 42 2.2
28dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
29gb|AC156807.2| Pan troglodytes BAC clone CH251-353P10 from chrom... 42 2.2
30gb|AY089019.1| Arabidopsis thaliana clone 17172 mRNA, complete s... 42 2.2
31emb|AL671926.11| Mouse DNA sequence from clone RP23-356J7 on chr... 42 2.2
32dbj|AK101680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
33dbj|AK068724.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
34dbj|AK060532.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
35emb|AL109767.7|CNS018OX Human chromosome 14 DNA sequence BAC R-8... 42 2.2
36emb|AL132819.6|CNS01DTO Human chromosome 14 DNA sequence BAC C-2... 42 2.2
37gb|AF246928.2| Homo sapiens chromosome 21 clone SCb-318B17 map p... 40 8.6
38gb|AC116592.5| Mus musculus BAC clone RP24-90K3 from 2, complete... 40 8.6
39gb|AC068812.13|AC068812 Homo sapiens chromosome N/A clone RP11-2... 40 8.6
40dbj|BS000018.1| Pan troglodytes chromosome 22 clone:PTB-080A13, ... 40 8.6
41emb|AL163209.2|HS21C009 Homo sapiens chromosome 21 segment HS21C009 40 8.6
42emb|AL121775.3|CNS01DSG Human chromosome 14 DNA sequence BAC R-5... 40 8.6
43emb|AL772377.6| Mouse DNA sequence from clone RP23-141B15 on chr... 40 8.6
44emb|AJ006998.1|HS75G13 Homo sapiens chromosome 21 PAC RPCIP704G1... 40 8.6
45emb|AL590762.1|HSXDPA Homo sapiens chromosome X sequence from 6... 40 8.6 
>tpg|BK001566.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) HN1-like protein
            isoform 1 mRNA, complete cds
          Length = 1262

 Score =  361 bits (182), Expect = 2e-96
 Identities = 293/330 (88%)
 Strand = Plus / Minus

                                                                        
Query: 265  attagatgagtgcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagt 324
            ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 1016 attagatcagtgcaatgctgctctcgccaccagggggcttgcggacaccgccgagatagt 957

                                                                        
Query: 325  ctcgcgaagacgcctttccatcggagaatatgtcattgccgctcatctccttaagctttg 384
            |||| | ||  |||  |||||| |  || |||||| |||||||||||||||| |||||||
Sbjct: 956  ctcggggagctgccgctccatcagcaaagatgtcactgccgctcatctccttcagctttg 897

                                                                        
Query: 385  ctgagctcagagacttgtcagctgagccaggaggagcatcctcgttaaagatgttattgc 444
            ||||||||||||| || ||||||||  |||| | ||| ||||| || |||||||| ||||
Sbjct: 896  ctgagctcagagatttctcagctgatgcaggggtagcgtcctctttgaagatgttgttgc 837

                                                                        
Query: 445  ctgtcagctcttggaacttctggttgtgaattttctttgctgtcttcgttacaggatcct 504
            |||||| |||||||||||||||||| || ||||||||||  |||||   |||||| ||||
Sbjct: 836  ctgtcaactcttggaacttctggttatggattttctttgacgtcttgactacaggctcct 777

                                                                        
Query: 505  cactgaacgtgatgttgcttggacctccagcaggattggatactttcactgatgtgtgca 564
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 776  cactgaacgtgatgttgcttggacctccagcaggattggatactttcactgatgtgtgga 717

                                          
Query: 565  cgcttcttcgttgtggaagtgcaaaatcta 594
            |||||||  |||||||||||||||||||||
Sbjct: 716  cgcttctcggttgtggaagtgcaaaatcta 687



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 46   gagattaatacataagtacca 66
            |||||||||||||||||||||
Sbjct: 1227 gagattaatacataagtacca 1207



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 112  gagtcagatcctgctgactctacactatattagggctaagatatc 156
            ||||||||| |||||||||||| |  |||| ||||| ||||||||
Sbjct: 1165 gagtcagattctgctgactctagatgatatcagggccaagatatc 1121
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>dbj|AK103788.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145I18, full
            insert sequence
          Length = 1373

 Score =  361 bits (182), Expect = 2e-96
 Identities = 293/330 (88%)
 Strand = Plus / Minus

                                                                        
Query: 265  attagatgagtgcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagt 324
            ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 1016 attagatcagtgcaatgctgctctcgccaccagggggcttgcggacaccgccgagatagt 957

                                                                        
Query: 325  ctcgcgaagacgcctttccatcggagaatatgtcattgccgctcatctccttaagctttg 384
            |||| | ||  |||  |||||| |  || |||||| |||||||||||||||| |||||||
Sbjct: 956  ctcggggagctgccgctccatcagcaaagatgtcactgccgctcatctccttcagctttg 897

                                                                        
Query: 385  ctgagctcagagacttgtcagctgagccaggaggagcatcctcgttaaagatgttattgc 444
            ||||||||||||| || ||||||||  |||| | ||| ||||| || |||||||| ||||
Sbjct: 896  ctgagctcagagatttctcagctgatgcaggggtagcgtcctctttgaagatgttgttgc 837

                                                                        
Query: 445  ctgtcagctcttggaacttctggttgtgaattttctttgctgtcttcgttacaggatcct 504
            |||||| |||||||||||||||||| || ||||||||||  |||||   |||||| ||||
Sbjct: 836  ctgtcaactcttggaacttctggttatggattttctttgacgtcttgactacaggctcct 777

                                                                        
Query: 505  cactgaacgtgatgttgcttggacctccagcaggattggatactttcactgatgtgtgca 564
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 776  cactgaacgtgatgttgcttggacctccagcaggattggatactttcactgatgtgtgga 717

                                          
Query: 565  cgcttcttcgttgtggaagtgcaaaatcta 594
            |||||||  |||||||||||||||||||||
Sbjct: 716  cgcttctcggttgtggaagtgcaaaatcta 687



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 46   gagattaatacataagtacca 66
            |||||||||||||||||||||
Sbjct: 1227 gagattaatacataagtacca 1207



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 112  gagtcagatcctgctgactctacactatattagggctaagatatc 156
            ||||||||| |||||||||||| |  |||| ||||| ||||||||
Sbjct: 1165 gagtcagattctgctgactctagatgatatcagggccaagatatc 1121
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>dbj|AK101129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025P19, full
            insert sequence
          Length = 1262

 Score =  361 bits (182), Expect = 2e-96
 Identities = 293/330 (88%)
 Strand = Plus / Minus

                                                                        
Query: 265  attagatgagtgcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagt 324
            ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 1016 attagatcagtgcaatgctgctctcgccaccagggggcttgcggacaccgccgagatagt 957

                                                                        
Query: 325  ctcgcgaagacgcctttccatcggagaatatgtcattgccgctcatctccttaagctttg 384
            |||| | ||  |||  |||||| |  || |||||| |||||||||||||||| |||||||
Sbjct: 956  ctcggggagctgccgctccatcagcaaagatgtcactgccgctcatctccttcagctttg 897

                                                                        
Query: 385  ctgagctcagagacttgtcagctgagccaggaggagcatcctcgttaaagatgttattgc 444
            ||||||||||||| || ||||||||  |||| | ||| ||||| || |||||||| ||||
Sbjct: 896  ctgagctcagagatttctcagctgatgcaggggtagcgtcctctttgaagatgttgttgc 837

                                                                        
Query: 445  ctgtcagctcttggaacttctggttgtgaattttctttgctgtcttcgttacaggatcct 504
            |||||| |||||||||||||||||| || ||||||||||  |||||   |||||| ||||
Sbjct: 836  ctgtcaactcttggaacttctggttatggattttctttgacgtcttgactacaggctcct 777

                                                                        
Query: 505  cactgaacgtgatgttgcttggacctccagcaggattggatactttcactgatgtgtgca 564
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 776  cactgaacgtgatgttgcttggacctccagcaggattggatactttcactgatgtgtgga 717

                                          
Query: 565  cgcttcttcgttgtggaagtgcaaaatcta 594
            |||||||  |||||||||||||||||||||
Sbjct: 716  cgcttctcggttgtggaagtgcaaaatcta 687



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 46   gagattaatacataagtacca 66
            |||||||||||||||||||||
Sbjct: 1227 gagattaatacataagtacca 1207



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 112  gagtcagatcctgctgactctacactatattagggctaagatatc 156
            ||||||||| |||||||||||| |  |||| ||||| ||||||||
Sbjct: 1165 gagtcagattctgctgactctagatgatatcagggccaagatatc 1121
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>ref|XM_472718.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 918

 Score =  359 bits (181), Expect = 7e-96
 Identities = 292/329 (88%)
 Strand = Plus / Minus

                                                                       
Query: 266 ttagatgagtgcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagtc 325
           |||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 918 ttagatcagtgcaatgctgctctcgccaccagggggcttgcggacaccgccgagatagtc 859

                                                                       
Query: 326 tcgcgaagacgcctttccatcggagaatatgtcattgccgctcatctccttaagctttgc 385
           ||| | ||  |||  |||||| |  || |||||| |||||||||||||||| ||||||||
Sbjct: 858 tcggggagctgccgctccatcagcaaagatgtcactgccgctcatctccttcagctttgc 799

                                                                       
Query: 386 tgagctcagagacttgtcagctgagccaggaggagcatcctcgttaaagatgttattgcc 445
           |||||||||||| || ||||||||  |||| | ||| ||||| || |||||||| |||||
Sbjct: 798 tgagctcagagatttctcagctgatgcaggggtagcgtcctctttgaagatgttgttgcc 739

                                                                       
Query: 446 tgtcagctcttggaacttctggttgtgaattttctttgctgtcttcgttacaggatcctc 505
           ||||| |||||||||||||||||| || ||||||||||  |||||   |||||| |||||
Sbjct: 738 tgtcaactcttggaacttctggttatggattttctttgacgtcttgactacaggctcctc 679

                                                                       
Query: 506 actgaacgtgatgttgcttggacctccagcaggattggatactttcactgatgtgtgcac 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 678 actgaacgtgatgttgcttggacctccagcaggattggatactttcactgatgtgtggac 619

                                        
Query: 566 gcttcttcgttgtggaagtgcaaaatcta 594
           ||||||  |||||||||||||||||||||
Sbjct: 618 gcttctcggttgtggaagtgcaaaatcta 590
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>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15,
              complete sequence
          Length = 143109

 Score =  274 bits (138), Expect = 3e-70
 Identities = 240/274 (87%)
 Strand = Plus / Plus

                                                                          
Query: 265    attagatgagtgcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagt 324
              ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 107376 attagatcagtgcaatgctgctctcgccaccagggggcttgcggacaccgccgagatagt 107435

                                                                          
Query: 325    ctcgcgaagacgcctttccatcggagaatatgtcattgccgctcatctccttaagctttg 384
              |||| | ||  |||  |||||| |  || |||||| |||||||||||||||| |||||||
Sbjct: 107436 ctcggggagctgccgctccatcagcaaagatgtcactgccgctcatctccttcagctttg 107495

                                                                          
Query: 385    ctgagctcagagacttgtcagctgagccaggaggagcatcctcgttaaagatgttattgc 444
              ||||||||||||| || ||||||||  |||| | ||| ||||| || |||||||| ||||
Sbjct: 107496 ctgagctcagagatttctcagctgatgcaggggtagcgtcctctttgaagatgttgttgc 107555

                                                                          
Query: 445    ctgtcagctcttggaacttctggttgtgaattttctttgctgtcttcgttacaggatcct 504
              |||||| |||||||||||||||||| || ||||||||||  |||||   |||||| ||||
Sbjct: 107556 ctgtcaactcttggaacttctggttatggattttctttgacgtcttgactacaggctcct 107615

                                                
Query: 505    cactgaacgtgatgttgcttggacctccagcagg 538
              ||||||||||||||||||||||||||||||||||
Sbjct: 107616 cactgaacgtgatgttgcttggacctccagcagg 107649



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                      
Query: 539    attggatactttcactgatgtgtgcacgcttcttcgttgtggaagtgcaaaatcta 594
              |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||
Sbjct: 108265 attggatactttcactgatgtgtggacgcttctcggttgtggaagtgcaaaatcta 108320



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                           
Query: 112    gagtcagatcctgctgactctacactatattagggctaagatatc 156
              ||||||||| |||||||||||| |  |||| ||||| ||||||||
Sbjct: 107227 gagtcagattctgctgactctagatgatatcagggccaagatatc 107271



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 46     gagattaatacataagtacca 66
              |||||||||||||||||||||
Sbjct: 107165 gagattaatacataagtacca 107185
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  274 bits (138), Expect = 3e-70
 Identities = 240/274 (87%)
 Strand = Plus / Plus

                                                                            
Query: 265      attagatgagtgcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagt 324
                ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 22770180 attagatcagtgcaatgctgctctcgccaccagggggcttgcggacaccgccgagatagt 22770239

                                                                            
Query: 325      ctcgcgaagacgcctttccatcggagaatatgtcattgccgctcatctccttaagctttg 384
                |||| | ||  |||  |||||| |  || |||||| |||||||||||||||| |||||||
Sbjct: 22770240 ctcggggagctgccgctccatcagcaaagatgtcactgccgctcatctccttcagctttg 22770299

                                                                            
Query: 385      ctgagctcagagacttgtcagctgagccaggaggagcatcctcgttaaagatgttattgc 444
                ||||||||||||| || ||||||||  |||| | ||| ||||| || |||||||| ||||
Sbjct: 22770300 ctgagctcagagatttctcagctgatgcaggggtagcgtcctctttgaagatgttgttgc 22770359

                                                                            
Query: 445      ctgtcagctcttggaacttctggttgtgaattttctttgctgtcttcgttacaggatcct 504
                |||||| |||||||||||||||||| || ||||||||||  |||||   |||||| ||||
Sbjct: 22770360 ctgtcaactcttggaacttctggttatggattttctttgacgtcttgactacaggctcct 22770419

                                                  
Query: 505      cactgaacgtgatgttgcttggacctccagcagg 538
                ||||||||||||||||||||||||||||||||||
Sbjct: 22770420 cactgaacgtgatgttgcttggacctccagcagg 22770453



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                        
Query: 539      attggatactttcactgatgtgtgcacgcttcttcgttgtggaagtgcaaaatcta 594
                |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||
Sbjct: 22771069 attggatactttcactgatgtgtggacgcttctcggttgtggaagtgcaaaatcta 22771124



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 112      gagtcagatcctgctgactctacactatattagggctaagatatc 156
                ||||||||| |||||||||||| |  |||| ||||| ||||||||
Sbjct: 22770031 gagtcagattctgctgactctagatgatatcagggccaagatatc 22770075



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 46       gagattaatacataagtacca 66
                |||||||||||||||||||||
Sbjct: 22769969 gagattaatacataagtacca 22769989
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>gb|AY596573.1| Saccharum officinarum clone SCCCLR1C01D11, complete sequence
          Length = 1372

 Score =  258 bits (130), Expect = 2e-65
 Identities = 287/337 (85%), Gaps = 3/337 (0%)
 Strand = Plus / Minus

                                                                        
Query: 234  tagccagtcccgactagagcagtctaccataattagatgagtgcaatgctgctctcgcca 293
            ||||||||||  |||| ||||||| |  | ||| |||| || || |||||||||||||||
Sbjct: 1085 tagccagtccgaactaaagcagtccagaacaatcagatcagagcgatgctgctctcgcca 1026

                                                                        
Query: 294  ccagggggcttccggacaccgccgaggtagtctcgcgaagacgcctttccatcggagaat 353
            ||||||||||||||||  ||||||||||| ||||| | ||  |   |||||||||  || 
Sbjct: 1025 ccagggggcttccggatgccgccgaggtattctcggggagctggagttccatcggcaaag 966

                                                                        
Query: 354  atgtcattgccgctcatctccttaagctttgctgagctcagagacttgtcagctgagcca 413
            |||||| |||||||||||||||| ||||| || |||||||||||||| ||||||||| ||
Sbjct: 965  atgtcactgccgctcatctccttcagcttcgcagagctcagagacttctcagctgaggca 906

                                                                        
Query: 414  ggaggagcatcctcgttaaagatgttattgcctgtcagctcttggaacttctggttgtga 473
            ||  || | ||||| || |||||||| || ||||||||||| ||||||||||||||||| 
Sbjct: 905  gg--ga-cgtcctccttgaagatgttgttacctgtcagctcctggaacttctggttgtgg 849

                                                                        
Query: 474  attttctttgctgtcttcgttacaggatcctcactgaacgtgatgttgcttggacctcca 533
            |||||||||||||| |||  |||||| || |||||||||| |||||||||||||||||| 
Sbjct: 848  attttctttgctgttttcactacaggctcttcactgaacgagatgttgcttggacctccg 789

                                                 
Query: 534  gcaggattggatactttcactgatgtgtgcacgcttc 570
            |||||||| |||||||| ||||||||||| |||||||
Sbjct: 788  gcaggattagatactttaactgatgtgtggacgcttc 752



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 109  accgagtcagatcctgctgactctacactatattag 144
            |||||||||||| |||||||||||||| ||||||||
Sbjct: 1220 accgagtcagattctgctgactctacattatattag 1185
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>gb|AY107167.1| Zea mays PCO149856 mRNA sequence
          Length = 1497

 Score =  224 bits (113), Expect = 3e-55
 Identities = 249/292 (85%), Gaps = 3/292 (1%)
 Strand = Plus / Minus

                                                                        
Query: 279  atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 338
            ||||||||||| || ||||||||||||||||  ||||| ||||| ||||| | ||  | |
Sbjct: 1023 atgctgctctcaccgccagggggcttccggatgccgccaaggtattctcggggagctggc 964

                                                                        
Query: 339  tttccatcggagaatatgtcattgccgctcatctccttaagctttgctgagctcagagac 398
             ||||||||| ||| |||||| |||||||||||||||| ||||| || ||||||||||||
Sbjct: 963  gttccatcggcgaagatgtcactgccgctcatctccttcagcttcgcagagctcagagac 904

                                                                        
Query: 399  ttgtcagctgagccaggaggagcatcctcgttaaagatgttattgcctgtcagctcttgg 458
            || || || ||| ||||  || | ||||| || |||||||| || ||||||||||| |||
Sbjct: 903  ttctcggccgaggcagg--ga-cgtcctccttgaagatgttgttacctgtcagctcctgg 847

                                                                        
Query: 459  aacttctggttgtgaattttctttgctgtcttcgttacaggatcctcactgaacgtgatg 518
            |||||||||||||| ||||||||||||||||||  |||||| || || ||||| | ||||
Sbjct: 846  aacttctggttgtggattttctttgctgtcttcactacaggctcttcgctgaaagagatg 787

                                                                
Query: 519  ttgcttggacctccagcaggattggatactttcactgatgtgtgcacgcttc 570
            |||||||||||||| |||||||| |||||||| ||||||||||| |||||||
Sbjct: 786  ttgcttggacctccggcaggattagatactttaactgatgtgtggacgcttc 735
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>ref|XM_466380.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1150

 Score =  143 bits (72), Expect = 8e-31
 Identities = 255/316 (80%)
 Strand = Plus / Minus

                                                                       
Query: 279 atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 338
           ||||||||| |||| ||||| ||||||| ||| || |||| |||||| || || | | ||
Sbjct: 976 atgctgctcccgccgccaggaggcttcctgacgcctccgaagtagtcccgggaggccacc 917

                                                                       
Query: 339 tttccatcggagaatatgtcattgccgctcatctccttaagctttgctgagctcagagac 398
           || ||||||| ||| ||||   |||| ||||||||||| ||||| || | |||||| |||
Sbjct: 916 ttcccatcggcgaagatgttgctgccactcatctccttgagcttcgccgtgctcagggac 857

                                                                       
Query: 399 ttgtcagctgagccaggaggagcatcctcgttaaagatgttattgcctgtcagctcttgg 458
           || || || ||||| || ||||| || || || |||||||| ||||| |||| ||| |||
Sbjct: 856 ttctcggccgagcctgggggagcttcttccttgaagatgttgttgcccgtcaactcatgg 797

                                                                       
Query: 459 aacttctggttgtgaattttctttgctgtcttcgttacaggatcctcactgaacgtgatg 518
           ||||||||||| || |||||||| || |||||     | || ||||| |  ||| |||| 
Sbjct: 796 aacttctggttatggattttcttggcggtcttgaccgccggctcctccccaaacatgata 737

                                                                       
Query: 519 ttgcttggacctccagcaggattggatactttcactgatgtgtgcacgcttcttcgttgt 578
           ||||| |||||||| ||||||||||||||||| ||||| ||||| | ||||||| |||||
Sbjct: 736 ttgctcggacctccggcaggattggatactttaactgaagtgtgaatgcttcttggttgt 677

                           
Query: 579 ggaagtgcaaaatcta 594
           ||||| ||||||||||
Sbjct: 676 ggaagcgcaaaatcta 661
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>dbj|AK059246.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G05, full
           insert sequence
          Length = 1150

 Score =  143 bits (72), Expect = 8e-31
 Identities = 255/316 (80%)
 Strand = Plus / Minus

                                                                       
Query: 279 atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 338
           ||||||||| |||| ||||| ||||||| ||| || |||| |||||| || || | | ||
Sbjct: 976 atgctgctcccgccgccaggaggcttcctgacgcctccgaagtagtcccgggaggccacc 917

                                                                       
Query: 339 tttccatcggagaatatgtcattgccgctcatctccttaagctttgctgagctcagagac 398
           || ||||||| ||| ||||   |||| ||||||||||| ||||| || | |||||| |||
Sbjct: 916 ttcccatcggcgaagatgttgctgccactcatctccttgagcttcgccgtgctcagggac 857

                                                                       
Query: 399 ttgtcagctgagccaggaggagcatcctcgttaaagatgttattgcctgtcagctcttgg 458
           || || || ||||| || ||||| || || || |||||||| ||||| |||| ||| |||
Sbjct: 856 ttctcggccgagcctgggggagcttcttccttgaagatgttgttgcccgtcaactcatgg 797

                                                                       
Query: 459 aacttctggttgtgaattttctttgctgtcttcgttacaggatcctcactgaacgtgatg 518
           ||||||||||| || |||||||| || |||||     | || ||||| |  ||| |||| 
Sbjct: 796 aacttctggttatggattttcttggcggtcttgaccgccggctcctccccaaacatgata 737

                                                                       
Query: 519 ttgcttggacctccagcaggattggatactttcactgatgtgtgcacgcttcttcgttgt 578
           ||||| |||||||| ||||||||||||||||| ||||| ||||| | ||||||| |||||
Sbjct: 736 ttgctcggacctccggcaggattggatactttaactgaagtgtgaatgcttcttggttgt 677

                           
Query: 579 ggaagtgcaaaatcta 594
           ||||| ||||||||||
Sbjct: 676 ggaagcgcaaaatcta 661
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 171/212 (80%)
 Strand = Plus / Plus

                                                                            
Query: 279      atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 338
                ||||||||| |||| ||||| ||||||| ||| || |||| |||||| || || | | ||
Sbjct: 22063466 atgctgctcccgccgccaggaggcttcctgacgcctccgaagtagtcccgggaggccacc 22063525

                                                                            
Query: 339      tttccatcggagaatatgtcattgccgctcatctccttaagctttgctgagctcagagac 398
                || ||||||| ||| ||||   |||| ||||||||||| ||||| || | |||||| |||
Sbjct: 22063526 ttcccatcggcgaagatgttgctgccactcatctccttgagcttcgccgtgctcagggac 22063585

                                                                            
Query: 399      ttgtcagctgagccaggaggagcatcctcgttaaagatgttattgcctgtcagctcttgg 458
                || || || ||||| || ||||| || || || |||||||| ||||| |||| ||| |||
Sbjct: 22063586 ttctcggccgagcctgggggagcttcttccttgaagatgttgttgcccgtcaactcatgg 22063645

                                                
Query: 459      aacttctggttgtgaattttctttgctgtctt 490
                ||||||||||| || |||||||| || |||||
Sbjct: 22063646 aacttctggttatggattttcttggcggtctt 22063677



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                        
Query: 539      attggatactttcactgatgtgtgcacgcttcttcgttgtggaagtgcaaaatcta 594
                |||||||||||| ||||| ||||| | ||||||| |||||||||| ||||||||||
Sbjct: 22064093 attggatactttaactgaagtgtgaatgcttcttggttgtggaagcgcaaaatcta 22064148
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>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0703B01
          Length = 137445

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 171/212 (80%)
 Strand = Plus / Plus

                                                                         
Query: 279   atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 338
             ||||||||| |||| ||||| ||||||| ||| || |||| |||||| || || | | ||
Sbjct: 37365 atgctgctcccgccgccaggaggcttcctgacgcctccgaagtagtcccgggaggccacc 37424

                                                                         
Query: 339   tttccatcggagaatatgtcattgccgctcatctccttaagctttgctgagctcagagac 398
             || ||||||| ||| ||||   |||| ||||||||||| ||||| || | |||||| |||
Sbjct: 37425 ttcccatcggcgaagatgttgctgccactcatctccttgagcttcgccgtgctcagggac 37484

                                                                         
Query: 399   ttgtcagctgagccaggaggagcatcctcgttaaagatgttattgcctgtcagctcttgg 458
             || || || ||||| || ||||| || || || |||||||| ||||| |||| ||| |||
Sbjct: 37485 ttctcggccgagcctgggggagcttcttccttgaagatgttgttgcccgtcaactcatgg 37544

                                             
Query: 459   aacttctggttgtgaattttctttgctgtctt 490
             ||||||||||| || |||||||| || |||||
Sbjct: 37545 aacttctggttatggattttcttggcggtctt 37576



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 539   attggatactttcactgatgtgtgcacgcttcttcgttgtggaagtgcaaaatcta 594
             |||||||||||| ||||| ||||| | ||||||| |||||||||| ||||||||||
Sbjct: 37992 attggatactttaactgaagtgtgaatgcttcttggttgtggaagcgcaaaatcta 38047
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>gb|AY111811.1| Zea mays CL5517_1 mRNA sequence
          Length = 1222

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 279 atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 338
           ||||||||||| || ||||| ||||| ||||  |||||||||||||| ||||| |   ||
Sbjct: 893 atgctgctctccccgccaggcggcttgcggatcccgccgaggtagtcccgcgaggggccc 834

                                                                   
Query: 339 tttccatcggagaatatgtcattgccgctcatctccttaagctttgctgagctcag 394
           || || || | ||| |||||  ||||| |||||||||| ||||| |||| ||||||
Sbjct: 833 ttcccgtccgcgaagatgtcgctgccggtcatctccttcagcttcgctgtgctcag 778
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>gb|AY596560.1| Saccharum officinarum clone SCUTLR1037C12, complete sequence
          Length = 1314

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 87/107 (81%)
 Strand = Plus / Minus

                                                                        
Query: 276  gcaatgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagac 335
            |||||||||||||| |||||||| ||||| ||||  ||||| |||||||| || || |  
Sbjct: 1058 gcaatgctgctctccccaccaggcggcttgcggatcccgcccaggtagtcccgggagggg 999

                                                           
Query: 336  gcctttccatcggagaatatgtcattgccgctcatctccttaagctt 382
            ||||| || || | ||| |||||  ||||| |||||||||| |||||
Sbjct: 998  gccttcccgtccgcgaagatgtcgctgccggtcatctccttcagctt 952
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>ref|XM_479197.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1305

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                        
Query: 279  atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 338
            |||||||||||||| || |||||||| ||||  || || |||||||| ||||| | ||| 
Sbjct: 1033 atgctgctctcgccgccggggggcttgcggatcccaccaaggtagtcccgcgacggcgct 974

                                                        
Query: 339  tttccatcggagaatatgtcattgccgctcatctccttaagctt 382
            || || || | ||| |||||  ||||| |||||||||| |||||
Sbjct: 973  ttgccgtccgcgaagatgtcgctgccggtcatctccttcagctt 930
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                            
Query: 279      atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 338
                |||||||||||||| || |||||||| ||||  || || |||||||| ||||| | ||| 
Sbjct: 25751136 atgctgctctcgccgccggggggcttgcggatcccaccaaggtagtcccgcgacggcgct 25751195

                                                            
Query: 339      tttccatcggagaatatgtcattgccgctcatctccttaagctt 382
                || || || | ||| |||||  ||||| |||||||||| |||||
Sbjct: 25751196 ttgccgtccgcgaagatgtcgctgccggtcatctccttcagctt 25751239
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>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524E08
          Length = 154696

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                         
Query: 279   atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 338
             |||||||||||||| || |||||||| ||||  || || |||||||| ||||| | ||| 
Sbjct: 68298 atgctgctctcgccgccggggggcttgcggatcccaccaaggtagtcccgcgacggcgct 68357

                                                         
Query: 339   tttccatcggagaatatgtcattgccgctcatctccttaagctt 382
             || || || | ||| |||||  ||||| |||||||||| |||||
Sbjct: 68358 ttgccgtccgcgaagatgtcgctgccggtcatctccttcagctt 68401
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>dbj|AK063642.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G12, full
            insert sequence
          Length = 1305

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                        
Query: 279  atgctgctctcgccaccagggggcttccggacaccgccgaggtagtctcgcgaagacgcc 338
            |||||||||||||| || |||||||| ||||  || || |||||||| ||||| | ||| 
Sbjct: 1033 atgctgctctcgccgccggggggcttgcggatcccaccaaggtagtcccgcgacggcgct 974

                                                        
Query: 339  tttccatcggagaatatgtcattgccgctcatctccttaagctt 382
            || || || | ||| |||||  ||||| |||||||||| |||||
Sbjct: 973  ttgccgtccgcgaagatgtcgctgccggtcatctccttcagctt 930
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>ref|NM_179197.1| Arabidopsis thaliana unknown protein AT4G39860 transcript variant
           AT4G39860.2 mRNA, complete cds
          Length = 1092

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 441 ttgcctgtcagctcttggaacttctggttgtgaattttctttgctgtcttcgttacagga 500
           |||||||| || || || ||||||||||| || || ||||||| |||||||   ||||| 
Sbjct: 747 ttgcctgtgagttcctgaaacttctggttatgtatcttctttgatgtcttcacaacaggt 688

                                                             
Query: 501 tcctcactgaacgtgatgttgcttggacctccagcaggattggatacttt 550
           || ||||||||    ||||||||| | ||||| ||||| ||||| |||||
Sbjct: 687 tcttcactgaatagtatgttgctttgtcctcctgcagggttggaaacttt 638
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>ref|NM_120149.2| Arabidopsis thaliana unknown protein AT4G39860 transcript variant
           AT4G39860.1 mRNA, complete cds
          Length = 1135

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 441 ttgcctgtcagctcttggaacttctggttgtgaattttctttgctgtcttcgttacagga 500
           |||||||| || || || ||||||||||| || || ||||||| |||||||   ||||| 
Sbjct: 790 ttgcctgtgagttcctgaaacttctggttatgtatcttctttgatgtcttcacaacaggt 731

                                                             
Query: 501 tcctcactgaacgtgatgttgcttggacctccagcaggattggatacttt 550
           || ||||||||    ||||||||| | ||||| ||||| ||||| |||||
Sbjct: 730 tcttcactgaatagtatgttgctttgtcctcctgcagggttggaaacttt 681
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>gb|AY117286.1| Arabidopsis thaliana unknown protein (At4g39860) mRNA, complete cds
          Length = 928

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 441 ttgcctgtcagctcttggaacttctggttgtgaattttctttgctgtcttcgttacagga 500
           |||||||| || || || ||||||||||| || || ||||||| |||||||   ||||| 
Sbjct: 722 ttgcctgtgagttcctgaaacttctggttatgtatcttctttgatgtcttcacaacaggt 663

                                                             
Query: 501 tcctcactgaacgtgatgttgcttggacctccagcaggattggatacttt 550
           || ||||||||    ||||||||| | ||||| ||||| ||||| |||||
Sbjct: 662 tcttcactgaatagtatgttgctttgtcctcctgcagggttggaaacttt 613
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>gb|AY063865.1| Arabidopsis thaliana unknown protein (At4g39860) mRNA, complete cds
          Length = 1093

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 441 ttgcctgtcagctcttggaacttctggttgtgaattttctttgctgtcttcgttacagga 500
           |||||||| || || || ||||||||||| || || ||||||| |||||||   ||||| 
Sbjct: 747 ttgcctgtgagttcctgaaacttctggttatgtatcttctttgatgtcttcacaacaggt 688

                                                             
Query: 501 tcctcactgaacgtgatgttgcttggacctccagcaggattggatacttt 550
           || ||||||||    ||||||||| | ||||| ||||| ||||| |||||
Sbjct: 687 tcttcactgaatagtatgttgctttgtcctcctgcagggttggaaacttt 638
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>ref|NM_127793.3| Arabidopsis thaliana unknown protein AT2G22270 mRNA, complete cds
          Length = 1243

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 278  aatgctgctctcgccaccagg 298
            |||||||||||||||||||||
Sbjct: 1046 aatgctgctctcgccaccagg 1026
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>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete
             sequence
          Length = 137709

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 276   gcaatgctgctctcgccaccagggggctt 304
             ||||||||||||||||| ||||| |||||
Sbjct: 36439 gcaatgctgctctcgccgccaggaggctt 36467
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 276      gcaatgctgctctcgccaccagggggctt 304
                ||||||||||||||||| ||||| |||||
Sbjct: 15300909 gcaatgctgctctcgccgccaggaggctt 15300881
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>emb|AL355980.6| Human DNA sequence from clone RP11-295L12 on chromosome 13, complete
             sequence
          Length = 191856

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 141   ttagggctaagatatccaaca 161
             |||||||||||||||||||||
Sbjct: 15425 ttagggctaagatatccaaca 15405
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>gb|AC007168.5| Arabidopsis thaliana chromosome 2 clone T26C19 map mi238, complete
             sequence
          Length = 81236

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 278   aatgctgctctcgccaccagg 298
             |||||||||||||||||||||
Sbjct: 27772 aatgctgctctcgccaccagg 27792
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 276      gcaatgctgctctcgccaccagggggctt 304
                ||||||||||||||||| ||||| |||||
Sbjct: 15295443 gcaatgctgctctcgccgccaggaggctt 15295415
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>gb|AC156807.2| Pan troglodytes BAC clone CH251-353P10 from chromosome unknown, complete
              sequence
          Length = 172466

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 282    ctgctctcgccaccagggggc 302
              |||||||||||||||||||||
Sbjct: 164660 ctgctctcgccaccagggggc 164680
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>gb|AY089019.1| Arabidopsis thaliana clone 17172 mRNA, complete sequence
          Length = 1226

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 278  aatgctgctctcgccaccagg 298
            |||||||||||||||||||||
Sbjct: 1033 aatgctgctctcgccaccagg 1013
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>emb|AL671926.11| Mouse DNA sequence from clone RP23-356J7 on chromosome X, complete
             sequence
          Length = 153310

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 518   gttgcttggacctccagcagg 538
             |||||||||||||||||||||
Sbjct: 36912 gttgcttggacctccagcagg 36932
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>dbj|AK101680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058I20, full
           insert sequence
          Length = 1135

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 276 gcaatgctgctctcgccaccagggggctt 304
           ||||||||||||||||| ||||| |||||
Sbjct: 902 gcaatgctgctctcgccgccaggaggctt 874
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>dbj|AK068724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161E13, full
           insert sequence
          Length = 1181

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 276 gcaatgctgctctcgccaccagggggctt 304
           ||||||||||||||||| ||||| |||||
Sbjct: 904 gcaatgctgctctcgccgccaggaggctt 876
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>dbj|AK060532.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A03, full
           insert sequence
          Length = 1307

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 276 gcaatgctgctctcgccaccagggggctt 304
           ||||||||||||||||| ||||| |||||
Sbjct: 923 gcaatgctgctctcgccgccaggaggctt 895
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>emb|AL109767.7|CNS018OX Human chromosome 14 DNA sequence BAC R-889B13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184039

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 282   ctgctctcgccaccagggggc 302
             |||||||||||||||||||||
Sbjct: 98956 ctgctctcgccaccagggggc 98936
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>emb|AL132819.6|CNS01DTO Human chromosome 14 DNA sequence BAC C-2200A16 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 140073

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 282    ctgctctcgccaccagggggc 302
              |||||||||||||||||||||
Sbjct: 123885 ctgctctcgccaccagggggc 123865
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>gb|AF246928.2| Homo sapiens chromosome 21 clone SCb-318B17 map p11-q21.1, complete
              sequence
          Length = 171914

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 462    ttctggttgtgaattttctttgct 485
              ||||||||||| ||||||||||||
Sbjct: 115845 ttctggttgtgtattttctttgct 115868
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>gb|AC116592.5| Mus musculus BAC clone RP24-90K3 from 2, complete sequence
          Length = 238657

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    agctgagccaggaggagcat 423
              ||||||||||||||||||||
Sbjct: 223848 agctgagccaggaggagcat 223867
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>gb|AC068812.13|AC068812 Homo sapiens chromosome N/A clone RP11-201E13, complete sequence
          Length = 177862

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 552   actgatgtgtgcacgcttct 571
             ||||||||||||||||||||
Sbjct: 98306 actgatgtgtgcacgcttct 98287
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>dbj|BS000018.1| Pan troglodytes chromosome 22 clone:PTB-080A13, map 22, complete
             sequences
          Length = 173559

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 462   ttctggttgtgaattttctttgct 485
             ||||||||||| ||||||||||||
Sbjct: 23184 ttctggttgtgtattttctttgct 23207
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>emb|AL163209.2|HS21C009 Homo sapiens chromosome 21 segment HS21C009
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 462   ttctggttgtgaattttctttgct 485
             ||||||||||| ||||||||||||
Sbjct: 70153 ttctggttgtgtattttctttgct 70176
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>emb|AL121775.3|CNS01DSG Human chromosome 14 DNA sequence BAC R-552K16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172576

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 552    actgatgtgtgcacgcttct 571
              ||||||||||||||||||||
Sbjct: 135115 actgatgtgtgcacgcttct 135134
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>emb|AL772377.6| Mouse DNA sequence from clone RP23-141B15 on chromosome 2, complete
              sequence
          Length = 217837

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    agctgagccaggaggagcat 423
              ||||||||||||||||||||
Sbjct: 212045 agctgagccaggaggagcat 212026
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>emb|AJ006998.1|HS75G13 Homo sapiens chromosome 21 PAC RPCIP704G1375Q2, complete sequence
          Length = 123521

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 462   ttctggttgtgaattttctttgct 485
             ||||||||||| ||||||||||||
Sbjct: 13754 ttctggttgtgtattttctttgct 13777
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>emb|AL590762.1|HSXDPA Homo sapiens chromosome X  sequence from 6 PACs 1 BAC and 1 cosmid,
              region GJB1-DXS559 map Xq13.1; segment 1/2, complete
              sequence
          Length = 305000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 534    gcaggattggatactttcac 553
              ||||||||||||||||||||
Sbjct: 109773 gcaggattggatactttcac 109792


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,787,204
Number of Sequences: 3902068
Number of extensions: 4787204
Number of successful extensions: 85550
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 85327
Number of HSP's gapped (non-prelim): 219
length of query: 629
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 606
effective length of database: 17,143,297,704
effective search space: 10388838408624
effective search space used: 10388838408624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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