ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21c17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_193885.1| Oryza sativa (japonica cultivar-group), predic... 210 4e-51
2dbj|AK059266.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 1e-48
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
4dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
5dbj|AK107503.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 1e-41
6dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
7ref|NM_189382.1| Oryza sativa (japonica cultivar-group), predic... 133 8e-28
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
9dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
10dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
11ref|XM_480621.1| Oryza sativa (japonica cultivar-group), mRNA 125 2e-25
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
13dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
14dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
15emb|AL022575.1|HS159A15 Human DNA sequence from clone RP1-159A15... 42 2.2
16gb|AC116680.21| Mus musculus chromosome 12, clone RP23-476M16, c... 42 2.2
17gb|AC005274.1|AC005274 Homo sapiens chromosome 17, clone hRPK.10... 42 2.2
18gb|CP000224.1| Drosophila melanogaster genomic scaffold 21100002... 42 2.2
19gb|AC101706.9| Mus musculus chromosome 15, clone RP23-256L18, co... 40 8.7
20gb|AC147633.3| Mus musculus BAC clone RP23-302B3 from chromosome... 40 8.7
21gb|AC122906.4| Mus musculus BAC clone RP23-47D11 from 10, comple... 40 8.7
22gb|AC121880.2| Mus musculus BAC clone RP24-132E6 from 13, comple... 40 8.7
23gb|AC158907.2| Mus musculus chromosome 15, clone RP24-266D22, co... 40 8.7
24gb|AF443118.1|AF443118 Gossypium hirsutum polyphosphoinositide b... 40 8.7
25gb|AC004971.3| Homo sapiens PAC clone RP5-1125K23 from 7, comple... 40 8.7
26dbj|AB052134.1| Macaca fascicularis brain cDNA, clone:QccE-18183... 40 8.7
27gb|AC018513.5|AC018513 Homo sapiens chromosome 14 clone RP11-58H... 40 8.7
28gb|AC147615.3| Mus musculus BAC clone RP23-408N24 from 10, compl... 40 8.7

>ref|NM_193885.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1248

 Score =  210 bits (106), Expect = 4e-51
 Identities = 304/370 (82%)
 Strand = Plus / Minus

                                                                        
Query: 266  aggaaagcagcgatctggagaagcaggtggaaatcagagatgcgcttgacgaaaggcaga 325
            ||||||||||| | | |||| || |||||||| || ||||| ||||| || || || |||
Sbjct: 1145 aggaaagcagcaaccaggaggagaaggtggaagtccgagatccgcttaacaaatggtaga 1086

                                                                        
Query: 326  tgctttgcacgatccatgtggctcctgagcgcgctcgccggcagaggaattccacggttt 385
            ||||| |||||||||| ||||||| |||||||||||   |  | |||  |||||||||| 
Sbjct: 1085 tgcttagcacgatccaggtggctcttgagcgcgctcattgctacagggtttccacggttc 1026

                                                                        
Query: 386  tccaccggaaatcccgtcgagagcgggccctggtgatcggagatcttgacgggcaccagg 445
            || |  ||||| || || || || || ||||| ||||| ||||||||||| |||||||||
Sbjct: 1025 tcgataggaaagccggttgaaagtggaccctgatgatcagagatcttgacaggcaccagg 966

                                                                        
Query: 446  aagaagtcattgtccacctccatggtgtccttcccccctgcaatcacctccttgcgcatc 505
            ||||||||||||||||||||||| || ||||| ||||| || | |||||| || ||||||
Sbjct: 965  aagaagtcattgtccacctccatagtatcctttcccccagccaccacctctttccgcatc 906

                                                                        
Query: 506  ttggacaggcgggggtcgtcggagtccttgacctccgtctccagcacgccgtccttgaac 565
            |||||||||||||| |||||   ||||   | ||||||||||||||| || |||||||||
Sbjct: 905  ttggacaggcggggatcgtctttgtccccaatctccgtctccagcacaccatccttgaac 846

                                                                        
Query: 566  agcttgacgcagacctcgctcatctggaaggcctcgaagtgcacgtcggccgagccgtct 625
            ||||| || || | ||| ||||||||||| |||||||||||||| ||  | ||||| || 
Sbjct: 845  agcttcacacaaatctcactcatctggaacgcctcgaagtgcacatcaccggagccatca 786

                      
Query: 626  tcccccacct 635
            ||||||||||
Sbjct: 785  tcccccacct 776



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>dbj|AK059266.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B02, full
            insert sequence
          Length = 1478

 Score =  202 bits (102), Expect = 1e-48
 Identities = 303/370 (81%)
 Strand = Plus / Minus

                                                                        
Query: 266  aggaaagcagcgatctggagaagcaggtggaaatcagagatgcgcttgacgaaaggcaga 325
            ||||||||||| | | |||| || |||||||| || ||||| ||||| || || || |||
Sbjct: 1188 aggaaagcagcaaccaggaggagaaggtggaagtccgagatccgcttaacaaatggtaga 1129

                                                                        
Query: 326  tgctttgcacgatccatgtggctcctgagcgcgctcgccggcagaggaattccacggttt 385
            ||||| |||||||||| ||||||| |||||||||||   |  | |||  |||||||||| 
Sbjct: 1128 tgcttagcacgatccaggtggctcttgagcgcgctcattgctacagggtttccacggttc 1069

                                                                        
Query: 386  tccaccggaaatcccgtcgagagcgggccctggtgatcggagatcttgacgggcaccagg 445
            || |  ||||| || || || || || ||||| ||||| ||||||||||| |||||||||
Sbjct: 1068 tcgataggaaagccggttgaaagtggaccctgatgatcagagatcttgacaggcaccagg 1009

                                                                        
Query: 446  aagaagtcattgtccacctccatggtgtccttcccccctgcaatcacctccttgcgcatc 505
            ||||||||||||||||||||||| || ||||| ||||| || | |||| | || ||||||
Sbjct: 1008 aagaagtcattgtccacctccatagtatcctttcccccagccaccacccctttccgcatc 949

                                                                        
Query: 506  ttggacaggcgggggtcgtcggagtccttgacctccgtctccagcacgccgtccttgaac 565
            |||||||||||||| |||||   ||||   | ||||||||||||||| || |||||||||
Sbjct: 948  ttggacaggcggggatcgtctttgtccccaatctccgtctccagcacaccatccttgaac 889

                                                                        
Query: 566  agcttgacgcagacctcgctcatctggaaggcctcgaagtgcacgtcggccgagccgtct 625
            ||||| || || | ||| ||||||||||| |||||||||||||| ||  | ||||| || 
Sbjct: 888  agcttcacacaaatctcactcatctggaacgcctcgaagtgcacatcaccggagccatca 829

                      
Query: 626  tcccccacct 635
            ||||||||||
Sbjct: 828  tcccccacct 819



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  178 bits (90), Expect = 1e-41
 Identities = 189/222 (85%)
 Strand = Plus / Minus

                                                                            
Query: 414      cctggtgatcggagatcttgacgggcaccaggaagaagtcattgtccacctccatggtgt 473
                |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct: 15627988 cctgatgatcagagatcttgacaggcaccaggaagaagtcattgtccacctccatagtat 15627929

                                                                            
Query: 474      ccttcccccctgcaatcacctccttgcgcatcttggacaggcgggggtcgtcggagtcct 533
                |||| ||||| || | |||||| || |||||||||||||||||||| |||||   |||| 
Sbjct: 15627928 cctttcccccagccaccacctctttccgcatcttggacaggcggggatcgtctttgtccc 15627869

                                                                            
Query: 534      tgacctccgtctccagcacgccgtccttgaacagcttgacgcagacctcgctcatctgga 593
                  | ||||||||||||||| || |||||||||||||| || || | ||| ||||||||||
Sbjct: 15627868 caatctccgtctccagcacaccatccttgaacagcttcacacaaatctcactcatctgga 15627809

                                                          
Query: 594      aggcctcgaagtgcacgtcggccgagccgtcttcccccacct 635
                | |||||||||||||| ||  | ||||| || ||||||||||
Sbjct: 15627808 acgcctcgaagtgcacatcaccggagccatcatcccccacct 15627767



 Score =  137 bits (69), Expect = 5e-29
 Identities = 135/157 (85%)
 Strand = Plus / Minus

                                                                            
Query: 414      cctggtgatcggagatcttgacgggcaccaggaagaagtcattgtccacctccatggtgt 473
                |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct: 42465667 cctggtgatcagagatcttgacaggcaccaggaagaagtcattgtccacctccatagtat 42465608

                                                                            
Query: 474      ccttcccccctgcaatcacctccttgcgcatcttggacaggcgggggtcgtcggagtcct 533
                |||| ||||| || | |||||| || |||||||||||||||||||| |||||   |||| 
Sbjct: 42465607 cctttcccccagccaccacctctttccgcatcttggacaggcggggatcgtctttgtccc 42465548

                                                     
Query: 534      tgacctccgtctccagcacgccgtccttgaacagctt 570
                | | || ||||| |||||| || |||||||| |||||
Sbjct: 42465547 taatcttcgtctgcagcacaccatccttgaatagctt 42465511



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                            
Query: 266      aggaaagcagcgatctggagaagcaggtggaaatcagagatgcgcttgacgaaaggcaga 325
                ||||||||||| | | |||| || |||||||| || ||||| ||||| || || || |||
Sbjct: 15631081 aggaaagcagcaaccaggaggagaaggtggaagtccgagatccgcttaacaaatggtaga 15631022

                                                    
Query: 326      tgctttgcacgatccatgtggctcctgagcgcgctc 361
                ||||| |||||||||| ||||||| |||||||||||
Sbjct: 15631021 tgcttagcacgatccaggtggctcttgagcgcgctc 15630986



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>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0416G11
          Length = 138858

 Score =  178 bits (90), Expect = 1e-41
 Identities = 189/222 (85%)
 Strand = Plus / Minus

                                                                         
Query: 414   cctggtgatcggagatcttgacgggcaccaggaagaagtcattgtccacctccatggtgt 473
             |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct: 65885 cctgatgatcagagatcttgacaggcaccaggaagaagtcattgtccacctccatagtat 65826

                                                                         
Query: 474   ccttcccccctgcaatcacctccttgcgcatcttggacaggcgggggtcgtcggagtcct 533
             |||| ||||| || | |||||| || |||||||||||||||||||| |||||   |||| 
Sbjct: 65825 cctttcccccagccaccacctctttccgcatcttggacaggcggggatcgtctttgtccc 65766

                                                                         
Query: 534   tgacctccgtctccagcacgccgtccttgaacagcttgacgcagacctcgctcatctgga 593
               | ||||||||||||||| || |||||||||||||| || || | ||| ||||||||||
Sbjct: 65765 caatctccgtctccagcacaccatccttgaacagcttcacacaaatctcactcatctgga 65706

                                                       
Query: 594   aggcctcgaagtgcacgtcggccgagccgtcttcccccacct 635
             | |||||||||||||| ||  | ||||| || ||||||||||
Sbjct: 65705 acgcctcgaagtgcacatcaccggagccatcatcccccacct 65664



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                         
Query: 266   aggaaagcagcgatctggagaagcaggtggaaatcagagatgcgcttgacgaaaggcaga 325
             ||||||||||| | | |||| || |||||||| || ||||| ||||| || || || |||
Sbjct: 68978 aggaaagcagcaaccaggaggagaaggtggaagtccgagatccgcttaacaaatggtaga 68919

                                                 
Query: 326   tgctttgcacgatccatgtggctcctgagcgcgctc 361
             ||||| |||||||||| ||||||| |||||||||||
Sbjct: 68918 tgcttagcacgatccaggtggctcttgagcgcgctc 68883



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>dbj|AK107503.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E03, full
            insert sequence
          Length = 2089

 Score =  178 bits (90), Expect = 1e-41
 Identities = 189/222 (85%)
 Strand = Plus / Minus

                                                                        
Query: 414  cctggtgatcggagatcttgacgggcaccaggaagaagtcattgtccacctccatggtgt 473
            |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct: 1036 cctgatgatcagagatcttgacaggcaccaggaagaagtcattgtccacctccatagtat 977

                                                                        
Query: 474  ccttcccccctgcaatcacctccttgcgcatcttggacaggcgggggtcgtcggagtcct 533
            |||| ||||| || | |||||| || |||||||||||||||||||| |||||   |||| 
Sbjct: 976  cctttcccccagccaccacctctttccgcatcttggacaggcggggatcgtctttgtccc 917

                                                                        
Query: 534  tgacctccgtctccagcacgccgtccttgaacagcttgacgcagacctcgctcatctgga 593
              | ||||||||||||||| || |||||||||||||| || || | ||| ||||||||||
Sbjct: 916  caatctccgtctccagcacaccatccttgaacagcttcacacaaatctcactcatctgga 857

                                                      
Query: 594  aggcctcgaagtgcacgtcggccgagccgtcttcccccacct 635
            | |||||||||||||| ||  | ||||| || ||||||||||
Sbjct: 856  acgcctcgaagtgcacatcaccggagccatcatcccccacct 815



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>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0483G10
          Length = 190721

 Score =  137 bits (69), Expect = 5e-29
 Identities = 135/157 (85%)
 Strand = Plus / Minus

                                                                          
Query: 414    cctggtgatcggagatcttgacgggcaccaggaagaagtcattgtccacctccatggtgt 473
              |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct: 125005 cctggtgatcagagatcttgacaggcaccaggaagaagtcattgtccacctccatagtat 124946

                                                                          
Query: 474    ccttcccccctgcaatcacctccttgcgcatcttggacaggcgggggtcgtcggagtcct 533
              |||| ||||| || | |||||| || |||||||||||||||||||| |||||   |||| 
Sbjct: 124945 cctttcccccagccaccacctctttccgcatcttggacaggcggggatcgtctttgtccc 124886

                                                   
Query: 534    tgacctccgtctccagcacgccgtccttgaacagctt 570
              | | || ||||| |||||| || |||||||| |||||
Sbjct: 124885 taatcttcgtctgcagcacaccatccttgaatagctt 124849



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>ref|NM_189382.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1098

 Score =  133 bits (67), Expect = 8e-28
 Identities = 100/111 (90%)
 Strand = Plus / Minus

                                                                       
Query: 415 ctggtgatcggagatcttgacgggcaccaggaagaagtcattgtccacctccatggtgtc 474
           ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 963 ctggtgatcagagatcttgacaggcaccaggaagaagtcattgtccacctccatagtatc 904

                                                              
Query: 475 cttcccccctgcaatcacctccttgcgcatcttggacaggcgggggtcgtc 525
           ||| ||||| || | |||||| || |||||||||||||||||||| |||||
Sbjct: 903 ctttcccccagccaccacctctttccgcatcttggacaggcggggatcgtc 853



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  129 bits (65), Expect = 1e-26
 Identities = 134/157 (85%)
 Strand = Plus / Minus

                                                                           
Query: 414     cctggtgatcggagatcttgacgggcaccaggaagaagtcattgtccacctccatggtgt 473
               |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |  |
Sbjct: 6250274 cctggtgatcagagatcttgacaggcaccaggaagaagtcattgtccacctccatagcat 6250215

                                                                           
Query: 474     ccttcccccctgcaatcacctccttgcgcatcttggacaggcgggggtcgtcggagtcct 533
               |||| ||||| || | |||||| || |||||||||||||||||||| |||||   |||| 
Sbjct: 6250214 cctttcccccagccaccacctctttccgcatcttggacaggcggggatcgtctttgtccc 6250155

                                                    
Query: 534     tgacctccgtctccagcacgccgtccttgaacagctt 570
               | | || ||||| |||||| || |||||||| |||||
Sbjct: 6250154 taatcttcgtctgcagcacaccatccttgaatagctt 6250118



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>dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1734_E04
          Length = 101439

 Score =  129 bits (65), Expect = 1e-26
 Identities = 134/157 (85%)
 Strand = Plus / Minus

                                                                         
Query: 414   cctggtgatcggagatcttgacgggcaccaggaagaagtcattgtccacctccatggtgt 473
             |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |  |
Sbjct: 36411 cctggtgatcagagatcttgacaggcaccaggaagaagtcattgtccacctccatagcat 36352

                                                                         
Query: 474   ccttcccccctgcaatcacctccttgcgcatcttggacaggcgggggtcgtcggagtcct 533
             |||| ||||| || | |||||| || |||||||||||||||||||| |||||   |||| 
Sbjct: 36351 cctttcccccagccaccacctctttccgcatcttggacaggcggggatcgtctttgtccc 36292

                                                  
Query: 534   tgacctccgtctccagcacgccgtccttgaacagctt 570
             | | || ||||| |||||| || |||||||| |||||
Sbjct: 36291 taatcttcgtctgcagcacaccatccttgaatagctt 36255



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>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1119_C05
          Length = 126112

 Score =  129 bits (65), Expect = 1e-26
 Identities = 134/157 (85%)
 Strand = Plus / Minus

                                                                          
Query: 414    cctggtgatcggagatcttgacgggcaccaggaagaagtcattgtccacctccatggtgt 473
              |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |  |
Sbjct: 113667 cctggtgatcagagatcttgacaggcaccaggaagaagtcattgtccacctccatagcat 113608

                                                                          
Query: 474    ccttcccccctgcaatcacctccttgcgcatcttggacaggcgggggtcgtcggagtcct 533
              |||| ||||| || | |||||| || |||||||||||||||||||| |||||   |||| 
Sbjct: 113607 cctttcccccagccaccacctctttccgcatcttggacaggcggggatcgtctttgtccc 113548

                                                   
Query: 534    tgacctccgtctccagcacgccgtccttgaacagctt 570
              | | || ||||| |||||| || |||||||| |||||
Sbjct: 113547 taatcttcgtctgcagcacaccatccttgaatagctt 113511



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>ref|XM_480621.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 537

 Score =  125 bits (63), Expect = 2e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                       
Query: 415 ctggtgatcggagatcttgacgggcaccaggaagaagtcattgtccacctccatggtgtc 474
           ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |  ||
Sbjct: 528 ctggtgatcagagatcttgacaggcaccaggaagaagtcattgtccacctccatagcatc 469

                                                              
Query: 475 cttcccccctgcaatcacctccttgcgcatcttggacaggcgggggtcgtc 525
           ||| ||||| || | |||||| || |||||||||||||||||||| |||||
Sbjct: 468 ctttcccccagccaccacctctttccgcatcttggacaggcggggatcgtc 418



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                         
Query: 414      cctggtgatcggagatcttgacgggcaccaggaagaagtcattgtccacctccatgg 470
                |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 19698724 cctggtgatcagagatcttgacaggcaccaggaagaagtcattgtccacctccatgg 19698780



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>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0048D08
          Length = 145772

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                      
Query: 414   cctggtgatcggagatcttgacgggcaccaggaagaagtcattgtccacctccatgg 470
             |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 30730 cctggtgatcagagatcttgacaggcaccaggaagaagtcattgtccacctccatgg 30786



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>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0041J06
          Length = 138157

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                       
Query: 414    cctggtgatcggagatcttgacgggcaccaggaagaagtcattgtccacctccatgg 470
              |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 137374 cctggtgatcagagatcttgacaggcaccaggaagaagtcattgtccacctccatgg 137430



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>emb|AL022575.1|HS159A15 Human DNA sequence from clone RP1-159A15 on chromosome X Contains the
             3' end of a novel gene, complete sequence
          Length = 71934

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 150   tccattggtttatgtttgacc 170
             |||||||||||||||||||||
Sbjct: 42126 tccattggtttatgtttgacc 42106



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>gb|AC116680.21| Mus musculus chromosome 12, clone RP23-476M16, complete sequence
          Length = 215303

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 439    caccaggaagaagtcattgtc 459
              |||||||||||||||||||||
Sbjct: 175061 caccaggaagaagtcattgtc 175081



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>gb|AC005274.1|AC005274 Homo sapiens chromosome 17, clone hRPK.1090_M_7, complete sequence
          Length = 205150

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 147   ctctccattggtttatgtttgacct 171
             |||||||||||||||||||| ||||
Sbjct: 38714 ctctccattggtttatgttttacct 38690



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>gb|CP000224.1| Drosophila melanogaster genomic scaffold 211000022280794
          Length = 474727

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 265    caggaaagcagcgatctggag 285
              |||||||||||||||||||||
Sbjct: 295135 caggaaagcagcgatctggag 295155



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>gb|AC101706.9| Mus musculus chromosome 15, clone RP23-256L18, complete sequence
          Length = 170006

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    ctctccattggtttatgttt 166
              ||||||||||||||||||||
Sbjct: 152564 ctctccattggtttatgttt 152545



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>gb|AC147633.3| Mus musculus BAC clone RP23-302B3 from chromosome 13, complete sequence
          Length = 218640

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    agacattcatataaattaca 90
             ||||||||||||||||||||
Sbjct: 17866 agacattcatataaattaca 17885



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>gb|AC122906.4| Mus musculus BAC clone RP23-47D11 from 10, complete sequence
          Length = 191190

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    catataaattacacatgaga 97
             ||||||||||||||||||||
Sbjct: 72888 catataaattacacatgaga 72869



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>gb|AC121880.2| Mus musculus BAC clone RP24-132E6 from 13, complete sequence
          Length = 143546

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     agacattcatataaattaca 90
              ||||||||||||||||||||
Sbjct: 101632 agacattcatataaattaca 101613



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>gb|AC158907.2| Mus musculus chromosome 15, clone RP24-266D22, complete sequence
          Length = 146781

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   ctctccattggtttatgttt 166
             ||||||||||||||||||||
Sbjct: 77129 ctctccattggtttatgttt 77148



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>gb|AF443118.1|AF443118 Gossypium hirsutum polyphosphoinositide binding protein (Ssh2)
           mRNA, complete cds
          Length = 955

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 418 gtgatcggagatcttgacgg 437
           ||||||||||||||||||||
Sbjct: 476 gtgatcggagatcttgacgg 495



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>gb|AC004971.3| Homo sapiens PAC clone RP5-1125K23 from 7, complete sequence
          Length = 123253

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 162    tgtttgacctgccaaggcgtcgatgagg 189
              |||||||||||||||||| || ||||||
Sbjct: 109064 tgtttgacctgccaaggcttccatgagg 109091



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>dbj|AB052134.1| Macaca fascicularis brain cDNA, clone:QccE-18183, similar to human
            histone deacetylase 1(HDAC11), mRNA, NM_024827.1
          Length = 3160

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 289  caggtggaaatcagagatgc 308
            ||||||||||||||||||||
Sbjct: 2308 caggtggaaatcagagatgc 2327



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>gb|AC018513.5|AC018513 Homo sapiens chromosome 14 clone RP11-58H3 map 14q31, complete sequence
          Length = 190773

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 67    cctgagacattcatataaattaca 90
             |||||||| |||||||||||||||
Sbjct: 17012 cctgagactttcatataaattaca 16989



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>gb|AC147615.3| Mus musculus BAC clone RP23-408N24 from 10, complete sequence
          Length = 205962

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    catataaattacacatgaga 97
             ||||||||||||||||||||
Sbjct: 49124 catataaattacacatgaga 49105


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,765,251
Number of Sequences: 3902068
Number of extensions: 4765251
Number of successful extensions: 86129
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85976
Number of HSP's gapped (non-prelim): 153
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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