ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20n14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YL076_MIMIV (Q5UPF2) Putative BTB/POZ domain-containing protein L76 30 7.7

>YL076_MIMIV (Q5UPF2) Putative BTB/POZ domain-containing protein L76|
          Length = 551

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 22/67 (32%), Positives = 32/67 (47%)
 Frame = -3

Query: 719 VSISILTKRCEVILGQFLADENDLGDRPLPSVRIEETVCVLQELARLILDIETANALNIP 540
           VS S++TK    I+  F   END+ D P     +EE +C  ++   L  D  T   +N+P
Sbjct: 68  VSNSLITKN---IIKSFYGQENDVIDIPDWQYILEEIIC--KDYLGLDYDTSTLKDINVP 122

Query: 539 LYLKDAL 519
               D L
Sbjct: 123 SEYYDLL 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,471,345
Number of Sequences: 219361
Number of extensions: 1838237
Number of successful extensions: 3819
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3819
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7592921998
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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