ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal0a04 |
|---|---|
| Clone Library Name | barley_pub |
>IF39_RAT (Q4G061) Eukaryotic translation initiation factor 3 subunit 9| (eIF-3 eta) Length = 797 Score = 35.0 bits (79), Expect = 0.15 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 554 EEEVAPPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDSQ---PGAAPNESPSAVNNG 384 EE A PA+ PT S P P A A + + +A + + G+A P A+ NG Sbjct: 70 EETAASPAASPTPQSAQEPSAPGKAEAGGEQARHPSARAEEEGGSDGSAAEAEPRALENG 129 Query: 383 Q 381 + Sbjct: 130 E 130
>C3G_DROME (O77086) Guanine nucleotide-releasing factor 2 (CRK SH3-binding GNRP)| Length = 1571 Score = 34.7 bits (78), Expect = 0.19 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 6/59 (10%) Frame = -2 Query: 539 PPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDS------QPGAAPNESPSAVNNGQ 381 PP+ KPT + G P ATV E +DA A + P NE+ SAV++GQ Sbjct: 1020 PPSPKPTLGENGSTGRPDSRMATVCEELNDAVASEDAMPEPRSPVLDSNENVSAVDDGQ 1078
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 33.1 bits (74), Expect = 0.56 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = -2 Query: 539 PPASKPTENSVAAPGEPA--IAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLSPGA 366 P A KP ++ PG PA A A + +AA ++PGAAP A PGA Sbjct: 70 PAAPKPAASAAPKPGAPAKPAAPAAKPAPAAPSAASAAKPGAAPKPGVQAKPAAAAKPGA 129
>DADA_KLEAE (O30745) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 33.1 bits (74), Expect = 0.56 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = -2 Query: 470 VSETKSDAAAVDSQPGAAPNESPSAVNNGQLSPG 369 +S+ D +D QPG P E SA N GQ+SPG Sbjct: 19 LSQAGHDVTVIDRQPG--PAEETSAANAGQISPG 50
>YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3| Length = 266 Score = 32.7 bits (73), Expect = 0.73 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Frame = -2 Query: 551 EEVAPPASKPT-ENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLS 375 + + PP +P + PG P + + D QPGA N+ PS N + Sbjct: 105 DPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKGPSGPNGNPGA 164 Query: 374 PGA 366 PGA Sbjct: 165 PGA 167
>PITX3_RAT (P81062) Pituitary homeobox 3 (Homeobox protein PTX3)| Length = 302 Score = 32.7 bits (73), Expect = 0.73 Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 3/98 (3%) Frame = -2 Query: 545 VAPPASKPT---ENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLS 375 V P AS+P +S+AA P+ A A T A+ GA P +P+AV++G +S Sbjct: 179 VGPLASQPVFSPPSSIAASMVPSAAAAP--GTVPGPGALQGLGGAPPGLAPAAVSSGAVS 236 Query: 374 PGASTVKCTXXXXXXXXXXXXLGPFNIRIVINQSLVSM 261 C P+ R N SL S+ Sbjct: 237 -------CPYASAAAAAAAAASSPYVYRDPCNSSLASL 267
>PITX3_MOUSE (O35160) Pituitary homeobox 3 (Homeobox protein PITX3)| Length = 302 Score = 32.7 bits (73), Expect = 0.73 Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 3/98 (3%) Frame = -2 Query: 545 VAPPASKPT---ENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLS 375 V P AS+P +S+AA P+ A A T A+ GA P +P+AV++G +S Sbjct: 179 VGPLASQPVFSPPSSIAASMVPSAAAAP--GTVPGPGALQGLGGAPPGLAPAAVSSGAVS 236 Query: 374 PGASTVKCTXXXXXXXXXXXXLGPFNIRIVINQSLVSM 261 C P+ R N SL S+ Sbjct: 237 -------CPYASAAAAAAAAASSPYVYRDPCNSSLASL 267
>ORC2_XENLA (Q91628) Origin recognition complex subunit 2 (XORC2)| Length = 558 Score = 32.7 bits (73), Expect = 0.73 Identities = 19/69 (27%), Positives = 33/69 (47%) Frame = -2 Query: 560 NFEEEVAPPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQ 381 N EE V+PPA+K TEN + G +T + SQP + ++ ++ ++ + Sbjct: 127 NPEEAVSPPANKQTENKTPSKGRKNEFISTTPHRLRKRLSAPSQPSDSESDYSASNSDEE 186 Query: 380 LSPGASTVK 354 L +S K Sbjct: 187 LEEKSSAAK 195
>PACS1_HUMAN (Q6VY07) Phosphofurin acidic cluster sorting protein 1 (PACS-1)| Length = 963 Score = 32.7 bits (73), Expect = 0.73 Identities = 17/57 (29%), Positives = 24/57 (42%) Frame = -2 Query: 539 PPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLSPG 369 PP + + P P +A AT S + + AAA S + AV +G PG Sbjct: 32 PPPQQQQQQPPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPG 88
>FAS2_SCHPO (Q10289) Fatty acid synthase alpha subunit (EC 2.3.1.86) (p190/210)| [Includes: Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Beta-ketoacyl reductase); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41) (Beta-ket Length = 1842 Score = 32.3 bits (72), Expect = 0.95 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = -2 Query: 560 NFEEEVAPPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAA-PNESPSAV 393 NFE+EVA ++ ++ + P A A + T + A A S P AA P+E P A+ Sbjct: 92 NFEDEVADEPAEAPASTSSTPKVETAAAAAPAATPAPAPAQTSAPAAALPDEPPKAL 148
>IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 gamma 1| (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220) Length = 1600 Score = 32.0 bits (71), Expect = 1.2 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 19/80 (23%) Frame = -2 Query: 563 VNFEEEVAPPASKPTENSV-------------AAPGEPAIAHATVSETKSDAAAVDSQ-- 429 V E+APP + P+E+ V AP PA+ + VSE + A V + Sbjct: 374 VESSPELAPPPACPSESPVPIAPTAQPEELLNGAPSPPAVDLSPVSEPEEQAKEVTASVA 433 Query: 428 ----PGAAPNESPSAVNNGQ 381 P A P +PSA + Q Sbjct: 434 PPTIPSATPATAPSATSPAQ 453
>MMP9_RABIT (P41246) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)| (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase) (Gelatinase B) (GELB) Length = 707 Score = 31.6 bits (70), Expect = 1.6 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = -2 Query: 551 EEVAPPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSA 396 + APP + PT + P E H T S T + +A P A+P+ +P+A Sbjct: 460 QPTAPPTACPTWPATVRPSE----HPTTSPTGAPSAGPTGPPTASPSAAPTA 507
>ODP2_ECOLI (P06959) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) Length = 629 Score = 31.6 bits (70), Expect = 1.6 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Frame = -2 Query: 557 FEEEVAPPASKPTENSVAAPG------EPAIAHATVSETKSDAAAVDSQPGAAP 414 FE E A PA+ P + AAP PA A A +E KS+ A D+ A P Sbjct: 277 FEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATP 330
>IF2_ZYMMO (Q5NQ27) Translation initiation factor IF-2| Length = 989 Score = 31.2 bits (69), Expect = 2.1 Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = -2 Query: 551 EEVAPPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDSQP-----GAAPNESPSA 396 E VA PA+ P AAP +P A AT ET S AA +QP AAP + +A Sbjct: 88 ETVATPAAAPAPAPAAAP-KPVAAEATAQET-SKAAPAAAQPVAEKEAAAPASAEAA 142
>TUB8_SOLTU (P33191) Induced stolen tip protein TUB8 (Fragment)| Length = 211 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/60 (35%), Positives = 26/60 (43%) Frame = -2 Query: 551 EEVAPPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLSP 372 E VA P +P A E +A A V E AAA ++P AP P A + SP Sbjct: 108 EPVAAPVEEPAAAEEPAAAEEPVAAAPVEE----AAAPKAEPEEAPVSEPEAEKAEEASP 163
>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7| Length = 1303 Score = 30.8 bits (68), Expect = 2.8 Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Frame = -2 Query: 563 VNFEEEVAPPAS--KPTENSVA-APGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAV 393 VN A P S KP++ V AP +P + T S S AA +PG A SP+A Sbjct: 1053 VNATGSSAAPGSSDKPSDPRVRKAPTDPRLQKPTDSTASSRAA----KPGPAEAPSPTAS 1108 Query: 392 NNGQLSPGAS 363 +G SP A+ Sbjct: 1109 PSGDASPPAT 1118
>PROS_DROVI (Q9U6A1) Protein prospero| Length = 1556 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/65 (26%), Positives = 31/65 (47%) Frame = -2 Query: 548 EVAPPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLSPG 369 ++ PPA PT AA A AH+ + S+ + Q ++ N + S+ NN + Sbjct: 847 QLHPPARLPTRMGGAAAAAAAAAHSVLKSELSEKFQMLRQHNSSSNSNNSSSNNNNSNNN 906 Query: 368 ASTVK 354 +S ++ Sbjct: 907 SSMMR 911
>MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (ACAMP-81) Length = 331 Score = 30.8 bits (68), Expect = 2.8 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = -2 Query: 554 EEEVAPPASKPT--ENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQ 381 +EE+ S P + AA G A + A + + AAA D+ GA+P E + V G Sbjct: 54 KEELQANGSAPAADKEEPAAAGSGAASPAAAEKDEPAAAAPDA--GASPVEKEAPVEGGA 111 Query: 380 LSPGAST 360 PG+ T Sbjct: 112 AEPGSPT 118 Score = 30.4 bits (67), Expect = 3.6 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = -2 Query: 542 APPASK--PTENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAP---NESP 402 A P K P E A PG P A + S +++ ++ GA P NE+P Sbjct: 98 ASPVEKEAPVEGGAAEPGSPTAAEGEAASAASSSSSPKAEDGATPSPSNETP 149
>MARE1_BOVIN (Q3ZBD9) Microtubule-associated protein RP/EB family member 1| (APC-binding protein EB1) (End-binding protein 1) (EB1) Length = 267 Score = 30.4 bits (67), Expect = 3.6 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Frame = -2 Query: 545 VAPPASKPTE---NSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSA 396 VAP +KP + +S AAP P H T + K+ V PG + +A Sbjct: 141 VAPALNKPKKPLSSSSAAPQRPITTHRTTATPKAGPGVVRKNPGVGNGDDEAA 193
>MARCS_HUMAN (P29966) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (Protein kinase C substrate, 80 kDa protein, light chain) (PKCSL) (80K-L protein) Length = 331 Score = 30.4 bits (67), Expect = 3.6 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Frame = -2 Query: 551 EEVAPPASK--PTENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAP---NESP 402 E A P K P E A PG P A + S ++ ++ GA P NE+P Sbjct: 96 EAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETP 150
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 30.4 bits (67), Expect = 3.6 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = -2 Query: 539 PPASKPTENSVAAPGEPA-IAHATVSETKSDAAAVDSQPGAAPNESP 402 PPA+KP PG+ HA + K A + +PGA P P Sbjct: 139 PPAAKPESKPTPKPGQNVPKPHAPAPKPKPGAPSKSPKPGARPGPRP 185
>TONB_PSEAE (Q51368) Protein tonB| Length = 342 Score = 30.4 bits (67), Expect = 3.6 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = -2 Query: 536 PASKPTENSVA-APGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLSPGAST 360 P KP EN++ A +P E ++A++ S AAP +P+ GQ +PGA T Sbjct: 177 PKPKPVENAIPKAKPKPEPKPKPEPEPSTEASSQPSPSSAAPPPAPTV---GQSTPGAQT 233
>PACS1_RAT (O88588) Phosphofurin acidic cluster sorting protein 1 (PACS-1)| Length = 961 Score = 30.0 bits (66), Expect = 4.7 Identities = 17/56 (30%), Positives = 25/56 (44%) Frame = -2 Query: 536 PASKPTENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLSPG 369 P +P++ P P +A AT S + + AAA S + AV +G PG Sbjct: 33 PPQQPSQPQQPTP--PKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPG 86
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 30.0 bits (66), Expect = 4.7 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Frame = -2 Query: 545 VAPPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDS-QPG--AAPNESPSAVNNGQLS 375 ++P A+KP+ EP+ A + E + A+D+ +PG P E P ++ L Sbjct: 312 LSPTAAKPSPFEGKTSTEPSTAKPSSPEPAPPSEAMDTDRPGTPVPPVEVPELMDTASLE 371 Query: 374 PGASTVK 354 PGA K Sbjct: 372 PGALDAK 378
>DIP2A_HUMAN (Q14689) Disco-interacting protein 2 homolog A| Length = 1571 Score = 30.0 bits (66), Expect = 4.7 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 17/80 (21%) Frame = -2 Query: 551 EEVAPP---ASKPTENSVAAPGE----PAIAHATV----------SETKSDAAAVDSQPG 423 E PP ++ E S+ PG P +H++V S T S A++ S PG Sbjct: 129 ETYTPPDTSSASEDEGSLRRPGRLTSTPLQSHSSVEPWLDRVIQGSSTSSSASSTSSHPG 188 Query: 422 AAPNESPSAVNNGQLSPGAS 363 P +PSA +PGA+ Sbjct: 189 GRPTTAPSAA----ATPGAA 204
>TRP_DROME (P19334) Transient receptor potential protein| Length = 1275 Score = 30.0 bits (66), Expect = 4.7 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 9/73 (12%) Frame = -2 Query: 554 EEEVAPPASKPTENSVAAP-----GEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVN 390 +++ P +KP + AAP +P A +K++A+ + GAA + +PSA + Sbjct: 1058 KKDAPAPPTKPGDTKPAAPKPGESAKPEAAAKKEESSKTEASKPAATNGAAKSAAPSAPS 1117 Query: 389 ----NGQLSPGAS 363 + +L PGA+ Sbjct: 1118 DAKPDSKLKPGAA 1130
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 30.0 bits (66), Expect = 4.7 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Frame = -2 Query: 545 VAPPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDS-QPG--AAPNESPSAVNNGQLS 375 ++P A+KP+ EP+ A + E + A+D+ +PG P E P ++ L Sbjct: 312 LSPTAAKPSPFEGKTSTEPSTAKPSSPEPAPPSEAMDADRPGTPVPPVEVPELMDTASLE 371 Query: 374 PGASTVK 354 PGA K Sbjct: 372 PGALDAK 378
>FOG1_HUMAN (Q8IX07) Zinc finger protein ZFPM1 (Zinc finger protein multitype| 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1) Length = 1004 Score = 30.0 bits (66), Expect = 4.7 Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 13/68 (19%) Frame = -2 Query: 542 APPASKPTE-------------NSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESP 402 APPA P ++ AP P HA E+ + S PG AP SP Sbjct: 726 APPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHAPAPESPRPGSGSGSGPGLAPARSP 785 Query: 401 SAVNNGQL 378 +G + Sbjct: 786 GPAADGPI 793
>YLS6_CAEEL (P34391) Putative cuticle collagen F09G8.6| Length = 278 Score = 29.6 bits (65), Expect = 6.1 Identities = 16/56 (28%), Positives = 21/56 (37%) Frame = -2 Query: 518 ENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLSPGASTVKC 351 + V + G+P A A + + A VD QPGA P PG C Sbjct: 213 QGPVGSDGQPGSAGAPGAPGPAGAPGVDGQPGANGQPGPDGEQGHDGQPGPDAAYC 268
>HLDE_STRCO (Q9Z5B5) Bifunctional protein hldE [Includes: D-beta-D-heptose| 7-phosphate kinase (EC 2.7.1.-) (D-beta-D-heptose 7-phosphotransferase); D-beta-D-heptose 1-phosphate adenosyltransferase (EC 2.7.7.-)] Length = 463 Score = 29.6 bits (65), Expect = 6.1 Identities = 20/49 (40%), Positives = 26/49 (53%) Frame = +1 Query: 403 GDSLGAAPGWLSTAAASDLVSDTVA*AIAGSPGAATEFSVGLLAGGATS 549 GDS GA + +TAA V A+ G+ GAAT F + AGGA + Sbjct: 251 GDSCGAGDRFAATAAGLLADGALVGEAVEGAVGAATAF---VAAGGAAA 296
>IF2_THIDA (Q3SKX1) Translation initiation factor IF-2| Length = 922 Score = 29.6 bits (65), Expect = 6.1 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 16/79 (20%) Frame = -2 Query: 542 APPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDSQPG----------------AAPN 411 AP A P V A P A A V+ET + AV P AAP Sbjct: 117 APAAPPPALEEVPAEPAPIEAQAPVAETPAAEPAVVEAPAPEPAVTAEVTAPAPVEAAPE 176 Query: 410 ESPSAVNNGQLSPGASTVK 354 +P+A G+ +P T + Sbjct: 177 PAPAAKPEGEAAPVKKTTR 195
>ATG1_EMENI (Q5BCU8) Serine/threonine-protein kinase atg1 (EC 2.7.11.1)| (Autophagy-related protein 1) Length = 935 Score = 29.6 bits (65), Expect = 6.1 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = -1 Query: 345 KQLPPSSVPPSPRTIQHSHC--NQSVSGKH 262 KQ+PP++ PP P + H+ Q + G+H Sbjct: 419 KQIPPAAAPPRPEAVSHATAPGRQELIGRH 448
>PACS1_MOUSE (Q8K212) Phosphofurin acidic cluster sorting protein 1 (PACS-1)| Length = 961 Score = 29.3 bits (64), Expect = 8.0 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = -2 Query: 500 PGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLSPG 369 P P +A AT S + + AAA S + AV +G PG Sbjct: 43 PTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPG 86
>FOXP3_HUMAN (Q9BZS1) Forkhead box protein P3 (Scurfin)| Length = 431 Score = 29.3 bits (64), Expect = 8.0 Identities = 22/62 (35%), Positives = 27/62 (43%) Frame = +1 Query: 370 PGDSCPLLTADGDSLGAAPGWLSTAAASDLVSDTVA*AIAGSPGAATEFSVGLLAGGATS 549 PG A G S GA+P W + ASDL+ G+ G F L GGA + Sbjct: 6 PGKPSAPSLALGPSPGASPSWRAAPKASDLL---------GARGPGGTFQGRDLRGGAHA 56 Query: 550 SS 555 SS Sbjct: 57 SS 58
>ENO_PROAC (Q6AAB8) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 426 Score = 29.3 bits (64), Expect = 8.0 Identities = 20/59 (33%), Positives = 26/59 (44%) Frame = +1 Query: 388 LLTADGDSLGAAPGWLSTAAASDLVSDTVA*AIAGSPGAATEFSVGLLAGGATSSSKFT 564 L T GD G AP S AAA DL+ D + A PG ++ + A K+T Sbjct: 198 LATGLGDEGGFAPNLPSNAAALDLILDAIK-AAGFEPGKDVALALDVAASEFFEDGKYT 255
>DC1I2_RAT (Q62871) Cytoplasmic dynein 1 intermediate chain 2 (Dynein| intermediate chain 2, cytosolic) (DH IC-2) (Cytoplasmic dynein intermediate chain 2) Length = 638 Score = 29.3 bits (64), Expect = 8.0 Identities = 17/67 (25%), Positives = 25/67 (37%) Frame = -2 Query: 557 FEEEVAPPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQL 378 F E PP P+ SV+ P E + S D+ P A S S + G + Sbjct: 77 FSEHWVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSALQLHSDSDLGRGPI 136 Query: 377 SPGASTV 357 G + + Sbjct: 137 KLGMAKI 143
>PALM_MOUSE (Q9Z0P4) Paralemmin| Length = 383 Score = 29.3 bits (64), Expect = 8.0 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = -2 Query: 548 EVAPPASKPTENSVA-APGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLSP 372 E AP ASK ENS A +PG P A E KS+ V++Q + + SP Sbjct: 102 ESAPAASK--ENSAAPSPGRPQSASPAKEEQKSE-TLVNAQQTPLGTPKENRTSTPVRSP 158 Query: 371 GASTV 357 G ST+ Sbjct: 159 GGSTM 163
>GUN6_DICDI (P22699) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Spore germination protein 270-6) (Cellulase) Length = 705 Score = 29.3 bits (64), Expect = 8.0 Identities = 15/53 (28%), Positives = 20/53 (37%) Frame = -2 Query: 554 EEEVAPPASKPTENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSA 396 E P PTE P E T + T++ V P P E+PS+ Sbjct: 502 ETPTETPTETPTETPTETPTETPTETPTETPTETPTETVTPTPTVTPTETPSS 554
>AF10_MOUSE (O54826) Protein AF-10| Length = 1068 Score = 29.3 bits (64), Expect = 8.0 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 13/79 (16%) Frame = -2 Query: 554 EEEVAPPASKPTENSVAAPGEPA-------IAHATVSE---TKSDAAAVDSQPGAAPNES 405 EE V K + S PG P ++H +VS T S A+A S ++ +S Sbjct: 460 EEAVKEKKRKGNKQSKHGPGRPKGNKNQENVSHLSVSSASPTSSVASAAGSVTSSSLQKS 519 Query: 404 PSAVNNG---QLSPGASTV 357 P+ + NG LS G+S V Sbjct: 520 PTLLRNGSLQSLSVGSSPV 538
>VGLB_HHV11 (P10211) Glycoprotein B precursor| Length = 904 Score = 29.3 bits (64), Expect = 8.0 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = -2 Query: 506 AAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLSP 372 ++PG P +A AT + A PGA P P N + P Sbjct: 33 SSPGTPGVAAATQAANGGPATPAPPAPGAPPTGDPKPKKNRKPKP 77
>MIS_HUMAN (P03971) Muellerian-inhibiting factor precursor (MIS)| (Anti-Muellerian hormone) (AMH) (Mullerian-inhibiting substance) Length = 560 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -2 Query: 524 PTENSVAAPGEPAIAHATVSETKSDAAAVDSQPGAAPNESPSAVNNGQLSPG 369 P + +AP A+A +E ++ AA + S PG P +P L PG Sbjct: 362 PLHDPTSAPWATALARRVAAELQAAAAELRSLPGLPPATAPLLARLLALCPG 413
>CDT1_MOUSE (Q8R4E9) DNA replication factor Cdt1 (Double parked homolog) (DUP)| (Retroviral insertion site 2 protein) Length = 557 Score = 29.3 bits (64), Expect = 8.0 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 11/54 (20%) Frame = -2 Query: 536 PASKPTENSVAAPGEPA-----------IAHATVSETKSDAAAVDSQPGAAPNE 408 P+S P +S A P PA + + V TKS V QPG P+E Sbjct: 76 PSSLPEPSSPAEPSPPADPSPPADPGSPVCPSPVKRTKSTTVYVGQQPGKIPSE 129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,830,839 Number of Sequences: 219361 Number of extensions: 1654780 Number of successful extensions: 6238 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 5472 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6192 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
