| Clone Name | rbags21c12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF203879.1|AF203879 Oryza sativa peroxiredoxin mRNA, complete cds Length = 626 Score = 480 bits (242), Expect = e-132 Identities = 458/530 (86%) Strand = Plus / Minus Query: 103 aggtccaggtgatcgatccggtcccaaagagctgaagctcctacagtgccttgaggatct 162 ||||||| ||||||| | | || || |||||||||||||| ||||||||||||||||||| Sbjct: 568 aggtccaagtgatcgctgccgttcctaagagctgaagctcttacagtgccttgaggatct 509 Query: 163 cttcagcaccagagattgtgaactggcctccttcctcgatgtttgcgacggtgaccttga 222 | |||||||||||||||||||| ||||| |||||||| |||||||| || || ||||||| Sbjct: 508 cctcagcaccagagattgtgaattggccaccttcctcaatgtttgcaacagtaaccttga 449 Query: 223 ggtcgtcagcaaggagagcaaagcgcttcgaacgaagacccaatcccttctccgtgagat 282 ||| |||||||||||||||||| || ||||||||| ||| | || ||||||| || | Sbjct: 448 ggttgtcagcaaggagagcaaaccgtctcgaacgaataccaagccctttctccgaaaggt 389 Query: 283 caagctcaagaccaagtgcttttgtgtatgctgccgctccatcagcaaggaacttcacat 342 ||||||||||||||||||| || ||||||| | || ||||| |||||||| ||||||| Sbjct: 388 caagctcaagaccaagtgccttggtgtatgttcccaaaccatcggcaaggaatttcacat 329 Query: 343 gcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtcattaacgctga 402 |||| ||||| ||||||| ||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 328 gcttattctcagggtatgactttgcccacgccttcatgacaaaggggtcgttaacactga 269 Query: 403 caagaagaatctcctctacacccttggctttgagatcctcagcttgagtaatgaagcctg 462 |||| | || || |||||||||||||||||||| | |||||| ||| | ||||| |||| Sbjct: 268 caagcaagatgtcgtctacacccttggctttgagctgctcagcctgatttatgaatcctg 209 Query: 463 gtacatgctgattgctgcaggtgggggtgaaggcgccggggacgccgaagaggatgacct 522 | |||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||| Sbjct: 208 gcacatgctgattgctgcaggtcggggtgaaggcaccggggacgccgaagaggacgacct 149 Query: 523 tcttgccggcggccagggagtggatcgagacctgctgcagctggtcgttctcgtcgaacc 582 ||||||||||||| ||| ||||| |||||||||||||||| ||| | | ||||||||| Sbjct: 148 tcttgccggcggcgaggccgtggacggagacctgctgcagcttgtcctccccgtcgaacc 89 Query: 583 acccgagctgcccgtcggggagggtgctgcccacgccaatcggagccatg 632 |||| ||||| ||||||||||||||| ||||||| ||| ||| |||||| Sbjct: 88 accccagctggccgtcggggagggtgtcgcccacggcaaccggggccatg 39
>dbj|AK058509.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G06, full insert sequence Length = 770 Score = 480 bits (242), Expect = e-132 Identities = 458/530 (86%) Strand = Plus / Minus Query: 103 aggtccaggtgatcgatccggtcccaaagagctgaagctcctacagtgccttgaggatct 162 ||||||| ||||||| | | || || |||||||||||||| ||||||||||||||||||| Sbjct: 626 aggtccaagtgatcgctgccgttcctaagagctgaagctcttacagtgccttgaggatct 567 Query: 163 cttcagcaccagagattgtgaactggcctccttcctcgatgtttgcgacggtgaccttga 222 | |||||||||||||||||||| ||||| |||||||| |||||||| || || ||||||| Sbjct: 566 cctcagcaccagagattgtgaattggccaccttcctcaatgtttgcaacagtaaccttga 507 Query: 223 ggtcgtcagcaaggagagcaaagcgcttcgaacgaagacccaatcccttctccgtgagat 282 ||| |||||||||||||||||| || ||||||||| ||| | || ||||||| || | Sbjct: 506 ggttgtcagcaaggagagcaaaccgtctcgaacgaataccaagccctttctccgaaaggt 447 Query: 283 caagctcaagaccaagtgcttttgtgtatgctgccgctccatcagcaaggaacttcacat 342 ||||||||||||||||||| || ||||||| | || ||||| |||||||| ||||||| Sbjct: 446 caagctcaagaccaagtgccttggtgtatgttcccaaaccatcggcaaggaatttcacat 387 Query: 343 gcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtcattaacgctga 402 |||| ||||| ||||||| ||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 386 gcttattctcagggtatgactttgcccacgccttcatgacaaaggggtcgttaacactga 327 Query: 403 caagaagaatctcctctacacccttggctttgagatcctcagcttgagtaatgaagcctg 462 |||| | || || |||||||||||||||||||| | |||||| ||| | ||||| |||| Sbjct: 326 caagcaagatgtcgtctacacccttggctttgagctgctcagcctgatttatgaatcctg 267 Query: 463 gtacatgctgattgctgcaggtgggggtgaaggcgccggggacgccgaagaggatgacct 522 | |||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||| Sbjct: 266 gcacatgctgattgctgcaggtcggggtgaaggcaccggggacgccgaagaggacgacct 207 Query: 523 tcttgccggcggccagggagtggatcgagacctgctgcagctggtcgttctcgtcgaacc 582 ||||||||||||| ||| ||||| |||||||||||||||| ||| | | ||||||||| Sbjct: 206 tcttgccggcggcgaggccgtggacggagacctgctgcagcttgtcctccccgtcgaacc 147 Query: 583 acccgagctgcccgtcggggagggtgctgcccacgccaatcggagccatg 632 |||| ||||| ||||||||||||||| ||||||| ||| ||| |||||| Sbjct: 146 accccagctggccgtcggggagggtgtcgcccacggcaaccggggccatg 97
>ref|NM_191997.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 489 Score = 452 bits (228), Expect = e-124 Identities = 423/488 (86%) Strand = Plus / Minus Query: 144 tacagtgccttgaggatctcttcagcaccagagattgtgaactggcctccttcctcgatg 203 |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||| Sbjct: 488 tacagtgccttgaggatctcctcagcaccagagattgtgaattggccaccttcctcaatg 429 Query: 204 tttgcgacggtgaccttgaggtcgtcagcaaggagagcaaagcgcttcgaacgaagaccc 263 ||||| || || |||||||||| |||||||||||||||||| || ||||||||| ||| Sbjct: 428 tttgcaacagtaaccttgaggttgtcagcaaggagagcaaaccgtctcgaacgaatacca 369 Query: 264 aatcccttctccgtgagatcaagctcaagaccaagtgcttttgtgtatgctgccgctcca 323 | || ||||||| || |||||||||||||||||||| || ||||||| | || ||| Sbjct: 368 agccctttctccgaaaggtcaagctcaagaccaagtgccttggtgtatgttcccaaacca 309 Query: 324 tcagcaaggaacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgaca 383 || |||||||| ||||||||||| ||||| ||||||| ||||||||| |||||||||||| Sbjct: 308 tcggcaaggaatttcacatgcttattctcagggtatgactttgcccacgccttcatgaca 249 Query: 384 aaggggtcattaacgctgacaagaagaatctcctctacacccttggctttgagatcctca 443 |||||||| ||||| |||||||| | || || |||||||||||||||||||| | |||| Sbjct: 248 aaggggtcgttaacactgacaagcaagatgtcgtctacacccttggctttgagctgctca 189 Query: 444 gcttgagtaatgaagcctggtacatgctgattgctgcaggtgggggtgaaggcgccgggg 503 || ||| | ||||| ||||| |||||||||||||||||||| ||||||||||| |||||| Sbjct: 188 gcctgatttatgaatcctggcacatgctgattgctgcaggtcggggtgaaggcaccgggg 129 Query: 504 acgccgaagaggatgaccttcttgccggcggccagggagtggatcgagacctgctgcagc 563 ||||||||||||| |||||||||||||||||| ||| ||||| ||||||||||||||| Sbjct: 128 acgccgaagaggacgaccttcttgccggcggcgaggccgtggacggagacctgctgcagc 69 Query: 564 tggtcgttctcgtcgaaccacccgagctgcccgtcggggagggtgctgcccacgccaatc 623 | ||| | | ||||||||||||| ||||| ||||||||||||||| ||||||| ||| | Sbjct: 68 ttgtcctccccgtcgaaccaccccagctggccgtcggggagggtgtcgcccacggcaacc 9 Query: 624 ggagccat 631 || ||||| Sbjct: 8 ggggccat 1
>gb|AY107305.1| Zea mays PCO096955 mRNA sequence Length = 820 Score = 422 bits (213), Expect = e-115 Identities = 396/457 (86%) Strand = Plus / Minus Query: 150 gccttgaggatctcttcagcaccagagattgtgaactggcctccttcctcgatgtttgcg 209 ||||| |||||||| ||||| || ||||| |||||||| || |||||||||||||||||| Sbjct: 561 gccttcaggatctcctcagcgccggagatcgtgaactgcccgccttcctcgatgtttgcg 502 Query: 210 acggtgaccttgaggtcgtcagcaaggagagcaaagcgcttcgaacgaagacccaatccc 269 ||||||||| |||||||||| || |||||||| || | |||||| || | |||| || Sbjct: 501 acggtgaccgtgaggtcgtcggccaggagagcgaacctcttcgagcgcacgcccagccct 442 Query: 270 ttctccgtgagatcaagctcaagaccaagtgcttttgtgtatgctgccgctccatcagca 329 || ||||||||||| ||||| || | || || || ||||| ||| | | ||| || || Sbjct: 441 ttgtccgtgagatcgagctcgaggtcgagcgccttggtgtacgctccagatccgtcggcg 382 Query: 330 aggaacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaagggg 389 ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 381 aggaacttcacgtgcttgttctcggggtaggtcttcgcccacgccttcatgacgaagggg 322 Query: 390 tcattaacgctgacaagaagaatctcctctacacccttggctttgagatcctcagcttga 449 || |||||||||| ||| || ||||| |||||||||||||||||||| | |||||| || Sbjct: 321 tcgttaacgctgataagcaggatctcgtctacacccttggctttgagctgctcagcctgt 262 Query: 450 gtaatgaagcctggtacatgctgattgctgcaggtgggggtgaaggcgccggggacgccg 509 || ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 261 gtgatgaagcctggcacatgctggttgctgcaggtcggggtgaaggcgccggggacgccg 202 Query: 510 aagaggatgaccttcttgccggcggccagggagtggatcgagacctgctgcagctggtcg 569 |||||||||||||||||||||||||| || | ||||| ||||||||||||||||||||| Sbjct: 201 aagaggatgaccttcttgccggcggcgagcgcgtggacggagacctgctgcagctggtcg 142 Query: 570 ttctcgtcgaaccacccgagctgcccgtcggggaggg 606 ||||||||||||||||||||||| ||||||||||||| Sbjct: 141 ttctcgtcgaaccacccgagctggccgtcggggaggg 105
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 268 bits (135), Expect = 2e-68 Identities = 255/295 (86%) Strand = Plus / Plus Query: 103 aggtccaggtgatcgatccggtcccaaagagctgaagctcctacagtgccttgaggatct 162 ||||||| ||||||| | | || || |||||||||||||| ||||||||||||||||||| Sbjct: 27739232 aggtccaagtgatcgctgccgttcctaagagctgaagctcttacagtgccttgaggatct 27739291 Query: 163 cttcagcaccagagattgtgaactggcctccttcctcgatgtttgcgacggtgaccttga 222 | |||||||||||||||||||| ||||| |||||||| |||||||| || || ||||||| Sbjct: 27739292 cctcagcaccagagattgtgaattggccaccttcctcaatgtttgcaacagtaaccttga 27739351 Query: 223 ggtcgtcagcaaggagagcaaagcgcttcgaacgaagacccaatcccttctccgtgagat 282 ||| |||||||||||||||||| || ||||||||| ||| | || ||||||| || | Sbjct: 27739352 ggttgtcagcaaggagagcaaaccgtctcgaacgaataccaagccctttctccgaaaggt 27739411 Query: 283 caagctcaagaccaagtgcttttgtgtatgctgccgctccatcagcaaggaacttcacat 342 ||||||||||||||||||| || ||||||| | || ||||| |||||||| ||||||| Sbjct: 27739412 caagctcaagaccaagtgccttggtgtatgttcccaaaccatcggcaaggaatttcacat 27739471 Query: 343 gcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtcattaac 397 |||| ||||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 27739472 gcttattctcagggtatgactttgcccacgccttcatgacaaaggggtcgttaac 27739526 Score = 159 bits (80), Expect = 1e-35 Identities = 137/156 (87%) Strand = Plus / Plus Query: 477 ctgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcggcc 536 |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 27740894 ctgcaggtcggggtgaaggcaccggggacgccgaagaggacgaccttcttgccggcggcg 27740953 Query: 537 agggagtggatcgagacctgctgcagctggtcgttctcgtcgaaccacccgagctgcccg 596 ||| ||||| |||||||||||||||| ||| | | ||||||||||||| ||||| ||| Sbjct: 27740954 aggccgtggacggagacctgctgcagcttgtcctccccgtcgaaccaccccagctggccg 27741013 Query: 597 tcggggagggtgctgcccacgccaatcggagccatg 632 |||||||||||| ||||||| ||| ||| |||||| Sbjct: 27741014 tcggggagggtgtcgcccacggcaaccggggccatg 27741049 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 417 tctacacccttggctttgagatcctcagcttgagtaatgaagcctggtacatgctgattg 476 |||||||||||||||||||| | |||||| ||| | ||||| ||||| |||||||||||| Sbjct: 27739830 tctacacccttggctttgagctgctcagcctgatttatgaatcctggcacatgctgattg 27739889 Query: 477 ct 478 || Sbjct: 27739890 ct 27739891
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 268 bits (135), Expect = 2e-68 Identities = 255/295 (86%) Strand = Plus / Plus Query: 103 aggtccaggtgatcgatccggtcccaaagagctgaagctcctacagtgccttgaggatct 162 ||||||| ||||||| | | || || |||||||||||||| ||||||||||||||||||| Sbjct: 31287 aggtccaagtgatcgctgccgttcctaagagctgaagctcttacagtgccttgaggatct 31346 Query: 163 cttcagcaccagagattgtgaactggcctccttcctcgatgtttgcgacggtgaccttga 222 | |||||||||||||||||||| ||||| |||||||| |||||||| || || ||||||| Sbjct: 31347 cctcagcaccagagattgtgaattggccaccttcctcaatgtttgcaacagtaaccttga 31406 Query: 223 ggtcgtcagcaaggagagcaaagcgcttcgaacgaagacccaatcccttctccgtgagat 282 ||| |||||||||||||||||| || ||||||||| ||| | || ||||||| || | Sbjct: 31407 ggttgtcagcaaggagagcaaaccgtctcgaacgaataccaagccctttctccgaaaggt 31466 Query: 283 caagctcaagaccaagtgcttttgtgtatgctgccgctccatcagcaaggaacttcacat 342 ||||||||||||||||||| || ||||||| | || ||||| |||||||| ||||||| Sbjct: 31467 caagctcaagaccaagtgccttggtgtatgttcccaaaccatcggcaaggaatttcacat 31526 Query: 343 gcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtcattaac 397 |||| ||||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 31527 gcttattctcagggtatgactttgcccacgccttcatgacaaaggggtcgttaac 31581 Score = 159 bits (80), Expect = 1e-35 Identities = 137/156 (87%) Strand = Plus / Plus Query: 477 ctgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcggcc 536 |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 32949 ctgcaggtcggggtgaaggcaccggggacgccgaagaggacgaccttcttgccggcggcg 33008 Query: 537 agggagtggatcgagacctgctgcagctggtcgttctcgtcgaaccacccgagctgcccg 596 ||| ||||| |||||||||||||||| ||| | | ||||||||||||| ||||| ||| Sbjct: 33009 aggccgtggacggagacctgctgcagcttgtcctccccgtcgaaccaccccagctggccg 33068 Query: 597 tcggggagggtgctgcccacgccaatcggagccatg 632 |||||||||||| ||||||| ||| ||| |||||| Sbjct: 33069 tcggggagggtgtcgcccacggcaaccggggccatg 33104 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 417 tctacacccttggctttgagatcctcagcttgagtaatgaagcctggtacatgctgattg 476 |||||||||||||||||||| | |||||| ||| | ||||| ||||| |||||||||||| Sbjct: 31885 tctacacccttggctttgagctgctcagcctgatttatgaatcctggcacatgctgattg 31944 Query: 477 ct 478 || Sbjct: 31945 ct 31946
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 268 bits (135), Expect = 2e-68 Identities = 255/295 (86%) Strand = Plus / Plus Query: 103 aggtccaggtgatcgatccggtcccaaagagctgaagctcctacagtgccttgaggatct 162 ||||||| ||||||| | | || || |||||||||||||| ||||||||||||||||||| Sbjct: 147798 aggtccaagtgatcgctgccgttcctaagagctgaagctcttacagtgccttgaggatct 147857 Query: 163 cttcagcaccagagattgtgaactggcctccttcctcgatgtttgcgacggtgaccttga 222 | |||||||||||||||||||| ||||| |||||||| |||||||| || || ||||||| Sbjct: 147858 cctcagcaccagagattgtgaattggccaccttcctcaatgtttgcaacagtaaccttga 147917 Query: 223 ggtcgtcagcaaggagagcaaagcgcttcgaacgaagacccaatcccttctccgtgagat 282 ||| |||||||||||||||||| || ||||||||| ||| | || ||||||| || | Sbjct: 147918 ggttgtcagcaaggagagcaaaccgtctcgaacgaataccaagccctttctccgaaaggt 147977 Query: 283 caagctcaagaccaagtgcttttgtgtatgctgccgctccatcagcaaggaacttcacat 342 ||||||||||||||||||| || ||||||| | || ||||| |||||||| ||||||| Sbjct: 147978 caagctcaagaccaagtgccttggtgtatgttcccaaaccatcggcaaggaatttcacat 148037 Query: 343 gcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtcattaac 397 |||| ||||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 148038 gcttattctcagggtatgactttgcccacgccttcatgacaaaggggtcgttaac 148092 Score = 159 bits (80), Expect = 1e-35 Identities = 137/156 (87%) Strand = Plus / Plus Query: 477 ctgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcggcc 536 |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 149460 ctgcaggtcggggtgaaggcaccggggacgccgaagaggacgaccttcttgccggcggcg 149519 Query: 537 agggagtggatcgagacctgctgcagctggtcgttctcgtcgaaccacccgagctgcccg 596 ||| ||||| |||||||||||||||| ||| | | ||||||||||||| ||||| ||| Sbjct: 149520 aggccgtggacggagacctgctgcagcttgtcctccccgtcgaaccaccccagctggccg 149579 Query: 597 tcggggagggtgctgcccacgccaatcggagccatg 632 |||||||||||| ||||||| ||| ||| |||||| Sbjct: 149580 tcggggagggtgtcgcccacggcaaccggggccatg 149615 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 417 tctacacccttggctttgagatcctcagcttgagtaatgaagcctggtacatgctgattg 476 |||||||||||||||||||| | |||||| ||| | ||||| ||||| |||||||||||| Sbjct: 148396 tctacacccttggctttgagctgctcagcctgatttatgaatcctggcacatgctgattg 148455 Query: 477 ct 478 || Sbjct: 148456 ct 148457
>gb|AF133302.1|AF133302 Brassica rapa subsp. pekinensis type 2 peroxiredoxin (PrxII) mRNA, complete cds Length = 718 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 475 tgctgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcgg 534 ||||||||||||||||||| || || ||||| |||||||||||||||||||| ||||||| Sbjct: 179 tgctgcaggtgggggtgaaagcaccagggacaccgaagaggatgaccttcttaccggcgg 120 Query: 535 ccagggagtggatcgagacctgctgcagctggtcgttctcgtcgaa 580 | |||||||| | ||||| ||| ||||| |||||||||||||| Sbjct: 119 cgagggagtgaacggagacagtctggagctgatcgttctcgtcgaa 74 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtca 392 |||||||||||||||||||||||||| ||||| ||||||||||||| ||||| || ||| Sbjct: 321 aacttcacatgcttgttctctgggtacgtcttcccccatgccttcattacaaacggatca 262 Query: 393 tt 394 || Sbjct: 261 tt 260
>gb|DQ296178.1| Brassica rapa clone 115 unknown mRNA Length = 714 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 475 tgctgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcgg 534 ||||||||||||||||||| || || ||||| |||||||||||||||||||| ||||||| Sbjct: 237 tgctgcaggtgggggtgaaagcaccagggacaccgaagaggatgaccttcttaccggcgg 178 Query: 535 ccagggagtggatcgagacctgctgcagctggtcgttctcgtcgaa 580 | |||||||| | ||||| ||| ||||| |||||||||||||| Sbjct: 177 cgagggagtgaacggagacagtctggagctgatcgttctcgtcgaa 132 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtca 392 |||||||||||||||||||||||||| ||||| ||||||||||||| ||||| || ||| Sbjct: 379 aacttcacatgcttgttctctgggtacgtcttcccccatgccttcatcacaaacggatca 320 Query: 393 tt 394 || Sbjct: 319 tt 318
>gb|AY496960.1| Capsicum annuum thioredoxin peroxidase CATP mRNA, complete cds Length = 509 Score = 93.7 bits (47), Expect = 7e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 318 gctccatcagcaaggaacttcacatgcttgttctctgggtatgtctttgcccatgccttc 377 |||||||||||||||||||||||||| |||||||| ||| | || || |||||||||||| Sbjct: 192 gctccatcagcaaggaacttcacatgtttgttctcagggaaggttttcgcccatgccttc 133 Query: 378 atgacaaaggggtcattaacgct 400 |||||||| || ||||| ||||| Sbjct: 132 atgacaaaaggatcattgacgct 110
>gb|AF442385.2| Capsicum annuum thioredoxin peroxidase mRNA, complete cds Length = 723 Score = 93.7 bits (47), Expect = 7e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 318 gctccatcagcaaggaacttcacatgcttgttctctgggtatgtctttgcccatgccttc 377 |||||||||||||||||||||||||| |||||||| ||| | || || |||||||||||| Sbjct: 365 gctccatcagcaaggaacttcacatgtttgttctcagggaaggttttcgcccatgccttc 306 Query: 378 atgacaaaggggtcattaacgct 400 |||||||| || ||||| ||||| Sbjct: 305 atgacaaaaggatcattgacgct 283
>ref|NM_104757.3| Arabidopsis thaliana antioxidant AT1G60740 mRNA, complete cds Length = 677 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtca 392 ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| || ||| Sbjct: 352 aacttcacatgcttgttctcttggtatgtctttccccatgccttcatcacaaatggatca 293 Query: 393 tt 394 || Sbjct: 292 tt 291
>gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete sequence Length = 120787 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtca 392 ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| || ||| Sbjct: 85617 aacttcacatgcttgttctcttggtatgtctttccccatgccttcatcacaaatggatca 85558 Query: 393 tt 394 || Sbjct: 85557 tt 85556
>emb|BX814755.1|CNS0AC3A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB92ZE12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 661 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtca 392 ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| || ||| Sbjct: 336 aacttcacatgcttgttctcttggtatgtctttccccatgccttcatcacaaatggatca 277 Query: 393 tt 394 || Sbjct: 276 tt 275
>emb|BX816839.1|CNS0ABRO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 643 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtca 392 ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| || ||| Sbjct: 318 aacttcacatgcttgttctcttggtatgtctttccccatgccttcatcacaaatggatca 259 Query: 393 tt 394 || Sbjct: 258 tt 257
>dbj|AK176203.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL23-08-A21 Length = 688 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtca 392 ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| || ||| Sbjct: 353 aacttcacatgcttgttctcttggtatgtctttccccatgccttcatcacaaatggatca 294 Query: 393 tt 394 || Sbjct: 293 tt 292
>gb|AY281152.1| Lycopersicon esculentum thioredoxin peroxidase 1 (TPx1) mRNA, complete cds Length = 807 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 318 gctccatcagcaaggaacttcacatgcttgttctctgggtatgtctttgcccatgccttc 377 |||||||||||||| || || ||||| |||||||| ||||| || |||||||| |||||| Sbjct: 360 gctccatcagcaagaaattttacatgtttgttctcagggtaagtttttgcccaggccttc 301 Query: 378 atgacaaaggggtcatt 394 || |||||||||||||| Sbjct: 300 atcacaaaggggtcatt 284 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 475 tgctgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgcc 529 ||||||| ||||| ||||| || ||||| ||| |||||| ||||||||||||||| Sbjct: 203 tgctgcaagtgggagtgaaagctccgggaacggcgaagatgatgaccttcttgcc 149
>gb|AC122722.7| Medicago truncatula clone mth1-3f12, complete sequence Length = 116833 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 321 ccatcagcaaggaacttcacatgcttgttctctgggtatgtctttgcccatg 372 ||||||||||||||||| |||||||||||||||||| ||||||| ||||||| Sbjct: 98012 ccatcagcaaggaacttgacatgcttgttctctgggaatgtcttggcccatg 98063
>gb|AY088309.1| Arabidopsis thaliana clone 5476 mRNA, complete sequence Length = 727 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcat 379 ||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 352 aacttcacatgcttgttctctgggtatgtctttccccatgctttcat 306 Score = 44.1 bits (22), Expect = 0.57 Identities = 58/70 (82%) Strand = Plus / Minus Query: 475 tgctgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcgg 534 ||||||||||||| ||||| || || || || || ||||||||||| || || ||||||| Sbjct: 210 tgctgcaggtgggagtgaaagcaccaggaacaccaaagaggatgacttttttaccggcgg 151 Query: 535 ccagggagtg 544 | || ||||| Sbjct: 150 cgagagagtg 141
>ref|NM_105269.2| Arabidopsis thaliana TPX2; antioxidant AT1G65970 (TPX2) mRNA, complete cds Length = 1260 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtca 392 ||||||||||||||||||||||| ||||| ||| ||||||||||||| ||||| || ||| Sbjct: 359 aacttcacatgcttgttctctggatatgtttttccccatgccttcatcacaaatggatca 300 Query: 393 tt 394 || Sbjct: 299 tt 298
>emb|AJ843119.1| Plantago major mRNA for thioredoxin-dependent peroxidase (tpx1 gene) Length = 743 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 321 ccatcagcaaggaacttcacatgcttgttctctgggtatgtctttgcccatgccttcatg 380 |||||||| |||||||| || |||||||| || |||||||| ||||||||||||||||| Sbjct: 370 ccatcagctaggaacttgacgtgcttgttgtcggggtatgtttttgcccatgccttcatc 311 Query: 381 acaaaggggtcatt 394 ||||| || ||||| Sbjct: 310 acaaatggatcatt 297 Score = 71.9 bits (36), Expect = 3e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 475 tgctgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcgg 534 ||||||| || || |||||||| ||||| || ||||||||||||||||||| ||||||| Sbjct: 216 tgctgcaagtaggagtgaaggcaccgggaacagcgaagaggatgaccttcttaccggcgg 157 Query: 535 ccagggagtggatcga 550 | |||||||| ||||| Sbjct: 156 caagggagtgaatcga 141
>gb|AF332463.1| Arabidopsis thaliana clone C00171 (f) putative type 2 peroxiredoxin protein (At1g65970) mRNA, complete cds Length = 489 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtca 392 ||||||||||||||||||||||| ||||| ||| ||||||||||||| ||||| || ||| Sbjct: 299 aacttcacatgcttgttctctggatatgtttttccccatgccttcatcacaaatggatca 240 Query: 393 tt 394 || Sbjct: 239 tt 238
>gb|AY084458.1| Arabidopsis thaliana clone 10862 mRNA, complete sequence Length = 683 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtca 392 ||||||||||||||||||||||| ||||| ||| ||||||||||||| ||||| || ||| Sbjct: 359 aacttcacatgcttgttctctggatatgtttttccccatgccttcatcacaaatggatca 300 Query: 393 tt 394 || Sbjct: 299 tt 298
>gb|BT003050.1| Arabidopsis thaliana At1g65970 gene, complete cds Length = 489 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtca 392 ||||||||||||||||||||||| ||||| ||| ||||||||||||| ||||| || ||| Sbjct: 299 aacttcacatgcttgttctctggatatgtttttccccatgccttcatcacaaatggatca 240 Query: 393 tt 394 || Sbjct: 239 tt 238
>gb|AC009513.2|F12P19 Sequence of BAC F12P19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 81490 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtca 392 ||||||||||||||||||||||| ||||| ||| ||||||||||||| ||||| || ||| Sbjct: 63078 aacttcacatgcttgttctctggatatgtttttccccatgccttcatcacaaatggatca 63137 Query: 393 tt 394 || Sbjct: 63138 tt 63139 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaa 385 ||||||||||| ||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 65075 aacttcacatgtttgttctctgggtatgtttttccccatgctttcatcacaaa 65127
>gb|AF121356.1|AF121356 Arabidopsis thaliana peroxiredoxin TPx2 mRNA, complete cds Length = 647 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtca 392 ||||||||||||||||||||||| ||||| ||| ||||||||||||| ||||| || ||| Sbjct: 358 aacttcacatgcttgttctctggatatgtttttccccatgccttcatcacaaatggatca 299 Query: 393 tt 394 || Sbjct: 298 tt 297
>gb|AY085779.1| Arabidopsis thaliana clone 1810 mRNA, complete sequence Length = 678 Score = 71.9 bits (36), Expect = 3e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 267 cccttctccgtgagatcaagctcaagaccaagtgcttttgtgtatgctgccgctccatca 326 ||||| ||| |||||||||||||||| ||||| | ||||||| || | | |||||| Sbjct: 419 cccttgtccttgagatcaagctcaagtccaagaagatgtgtgtattctccagatccatct 360 Query: 327 gcaaggaacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaag 386 || | |||||||||||||||||||||| |||||| || ||||||||||||| ||||| Sbjct: 359 gctacaaacttcacatgcttgttctctgtgtatgttttcccccatgccttcatcacaaat 300 Query: 387 gggtcatt 394 || ||||| Sbjct: 299 ggatcatt 292
>ref|NM_001036162.1| Arabidopsis thaliana TPX1; antioxidant AT1G65980 (TPX1) transcript variant AT1G65980.2 mRNA, complete cds Length = 838 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaa 385 ||||||||||| ||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 482 aacttcacatgtttgttctctgggtatgtttttccccatgctttcatcacaaa 430
>ref|NM_105270.2| Arabidopsis thaliana TPX1; antioxidant AT1G65980 (TPX1) transcript variant AT1G65980.1 mRNA, complete cds Length = 890 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaa 385 ||||||||||| ||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 482 aacttcacatgtttgttctctgggtatgtttttccccatgctttcatcacaaa 430
>ref|XM_959107.1| Neurospora crassa OR74A hypothetical protein (NCU03151.1) partial mRNA Length = 417 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 479 gcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttg 527 |||||||||||||||||| ||||||||| ||| ||||| |||||||||| Sbjct: 96 gcaggtgggggtgaaggcaccggggacggcgacgaggacgaccttcttg 48
>ref|XM_330586.1| Neurospora crassa OR74A hypothetical protein (NCU03151.1) partial mRNA Length = 417 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 479 gcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttg 527 |||||||||||||||||| ||||||||| ||| ||||| |||||||||| Sbjct: 96 gcaggtgggggtgaaggcaccggggacggcgacgaggacgaccttcttg 48
>emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid contig 5C2 Length = 98769 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 479 gcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttg 527 |||||||||||||||||| ||||||||| ||| ||||| |||||||||| Sbjct: 2848 gcaggtgggggtgaaggcaccggggacggcgacgaggacgaccttcttg 2800
>gb|AF483268.1| Populus tremula x Populus tremuloides peroxiredoxin mRNA, complete cds Length = 489 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 476 gctgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggc 532 ||||||||||||||||||||| ||||| || || |||||||||||||| || ||||| Sbjct: 156 gctgcaggtgggggtgaaggccccgggaacaccaaagaggatgacctttttaccggc 100 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 321 ccatcagcaaggaacttcacatgcttgttctctgggtatgtctttgcccatgccttcatg 380 |||||||| | ||| || |||||||| ||||| ||||| | || |||||||||||||| Sbjct: 311 ccatcagctaagaatttgacatgcttattctcagggtaagatttggcccatgccttcatc 252 Query: 381 acaaaggggtcattaacgctga 402 ||||||||||| || ||||||| Sbjct: 251 acaaaggggtcgttgacgctga 230
>gb|AY065056.1| Arabidopsis thaliana At1g65980/F12P19_14 mRNA, complete cds Length = 666 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaa 385 ||||||||||| ||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 362 aacttcacatgtttgttctctgggtatgtttttccccatgctttcatcacaaa 310
>gb|AF332464.1| Arabidopsis thaliana clone C00172 (e) putative type 2 peroxiredoxin protein (At1g65980) mRNA, complete cds Length = 489 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaa 385 ||||||||||| ||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 299 aacttcacatgtttgttctctgggtatgtttttccccatgctttcatcacaaa 247
>emb|BX813402.1|CNS0ADKB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZC10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 717 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaa 385 ||||||||||| ||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 400 aacttcacatgtttgttctctgggtatgtttttccccatgctttcatcacaaa 348
>emb|BX816021.1|CNS0AD4O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZD06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 605 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaa 385 ||||||||||| ||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 304 aacttcacatgtttgttctctgggtatgtttttccccatgctttcatcacaaa 252
>emb|BX841968.1|CNS09Y6H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL68ZD02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 720 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaa 385 ||||||||||| ||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 341 aacttcacatgtttgttctctgggtatgtttttccccatgctttcatcacaaa 289
>gb|AF121355.1|AF121355 Arabidopsis thaliana peroxiredoxin TPx1 mRNA, complete cds Length = 688 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 333 aacttcacatgcttgttctctgggtatgtctttgcccatgccttcatgacaaa 385 ||||||||||| ||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 352 aacttcacatgtttgttctctgggtatgtttttccccatgctttcatcacaaa 300
>gb|AE009045.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 71 of 256 of the complete sequence Length = 10844 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 479 gcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccg 530 |||||||||||||||||||||||| ||| | ||||||| |||||||||||| Sbjct: 3664 gcaggtgggggtgaaggcgccgggaacggcaaagaggaccaccttcttgccg 3715
>ref|XM_676869.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8692.2), mRNA Length = 507 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 485 gggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggc 532 |||||||||||| ||||||| | |||||||||||||||||||| |||| Sbjct: 177 gggggtgaaggcaccggggagggcgaagaggatgaccttcttgtcggc 130
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 479 gcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccg 530 |||||||||||||||||||||||| ||| | ||||||| |||||||||||| Sbjct: 775799 gcaggtgggggtgaaggcgccgggaacggcaaagaggaccaccttcttgccg 775850
>gb|AC009462.7| Drosophila melanogaster clone BACR27G04, complete sequence Length = 151609 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 489 gtgaaggcgccggggacgccgaagaggatgaccttcttgcc 529 |||||||||||||| |||||||||| ||| ||||||||||| Sbjct: 65054 gtgaaggcgccgggaacgccgaagatgatcaccttcttgcc 65094
>ref|XM_504381.1| Yarrowia lipolytica CLIB122, YALI0E25091g predicted mRNA Length = 591 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 478 tgcaggtgggggtgaaggcgccggggacg 506 ||||||||||||||||||||||||||||| Sbjct: 250 tgcaggtgggggtgaaggcgccggggacg 222
>ref|NM_142423.2| Drosophila melanogaster CG7215-RA, transcript variant A (CG7215), mRNA Length = 1422 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 489 gtgaaggcgccggggacgccgaagaggatgaccttcttgcc 529 |||||||||||||| |||||||||| ||| ||||||||||| Sbjct: 951 gtgaaggcgccgggaacgccgaagatgatcaccttcttgcc 911
>ref|NM_142422.3| Drosophila melanogaster CG7217-RA, transcript variant A (CG7217), mRNA Length = 1422 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 489 gtgaaggcgccggggacgccgaagaggatgaccttcttgcc 529 |||||||||||||| |||||||||| ||| ||||||||||| Sbjct: 951 gtgaaggcgccgggaacgccgaagatgatcaccttcttgcc 911
>ref|NM_001032020.1| Drosophila melanogaster CG7217-RB, transcript variant B (CG7217), mRNA Length = 757 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 489 gtgaaggcgccggggacgccgaagaggatgaccttcttgcc 529 |||||||||||||| |||||||||| ||| ||||||||||| Sbjct: 286 gtgaaggcgccgggaacgccgaagatgatcaccttcttgcc 246
>gb|AY051983.1| Drosophila melanogaster LD45324 full length cDNA Length = 712 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 489 gtgaaggcgccggggacgccgaagaggatgaccttcttgcc 529 |||||||||||||| |||||||||| ||| ||||||||||| Sbjct: 231 gtgaaggcgccgggaacgccgaagatgatcaccttcttgcc 191
>gb|BT022231.1| Drosophila melanogaster IP12465 full insert cDNA Length = 1821 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 489 gtgaaggcgccggggacgccgaagaggatgaccttcttgcc 529 |||||||||||||| |||||||||| ||| ||||||||||| Sbjct: 1537 gtgaaggcgccgggaacgccgaagatgatcaccttcttgcc 1577
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 478 tgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcgg 534 ||||||| |||||||| ||||||||||| ||||||||| |||||||| ||||||| Sbjct: 24830853 tgcaggtcggggtgaacgcgccggggaccgcgaagaggaccaccttcttcccggcgg 24830797
>gb|BT003526.1| Drosophila melanogaster RE19605 full insert cDNA Length = 1438 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 489 gtgaaggcgccggggacgccgaagaggatgaccttcttgcc 529 |||||||||||||| |||||||||| ||| ||||||||||| Sbjct: 952 gtgaaggcgccgggaacgccgaagatgatcaccttcttgcc 912
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 478 tgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcgg 534 ||||||| |||||||| ||||||||||| ||||||||| |||||||| ||||||| Sbjct: 41936 tgcaggtcggggtgaacgcgccggggaccgcgaagaggaccaccttcttcccggcgg 41880
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 478 tgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcgg 534 ||||||| |||||||| ||||||||||| ||||||||| |||||||| ||||||| Sbjct: 164534 tgcaggtcggggtgaacgcgccggggaccgcgaagaggaccaccttcttcccggcgg 164478
>dbj|AK104130.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H07, full insert sequence Length = 1098 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 478 tgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcgg 534 ||||||| |||||||| ||||||||||| ||||||||| |||||||| ||||||| Sbjct: 358 tgcaggtcggggtgaacgcgccggggaccgcgaagaggaccaccttcttcccggcgg 302
>dbj|AK068955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003C09, full insert sequence Length = 1140 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 478 tgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcgg 534 ||||||| |||||||| ||||||||||| ||||||||| |||||||| ||||||| Sbjct: 454 tgcaggtcggggtgaacgcgccggggaccgcgaagaggaccaccttcttcccggcgg 398
>dbj|AK058459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H12, full insert sequence Length = 1248 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 478 tgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcgg 534 ||||||| |||||||| ||||||||||| ||||||||| |||||||| ||||||| Sbjct: 453 tgcaggtcggggtgaacgcgccggggaccgcgaagaggaccaccttcttcccggcgg 397
>gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59 of 118 of the complete sequence Length = 224889 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 489 gtgaaggcgccggggacgccgaagaggatgaccttcttgcc 529 |||||||||||||| |||||||||| ||| ||||||||||| Sbjct: 5478 gtgaaggcgccgggaacgccgaagatgatcaccttcttgcc 5518
>gb|BT001575.1| Drosophila melanogaster RE23139 full insert cDNA Length = 1438 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 489 gtgaaggcgccggggacgccgaagaggatgaccttcttgcc 529 |||||||||||||| |||||||||| ||| ||||||||||| Sbjct: 952 gtgaaggcgccgggaacgccgaagatgatcaccttcttgcc 912
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 478 tgcaggtgggggtgaaggcgccggggacg 506 ||||||||||||||||||||||||||||| Sbjct: 3006426 tgcaggtgggggtgaaggcgccggggacg 3006398
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 480 caggtgggggtgaaggcgccggggacgccgaaga 513 ||||| ||||||||||||||||| |||||||||| Sbjct: 43914 caggtaggggtgaaggcgccgggcacgccgaaga 43881
>gb|BT009091.1| Triticum aestivum clone wkm2c.pk0003.c3:fis, full insert mRNA sequence Length = 1123 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 478 tgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgccggcgg 534 |||||||||| ||||||||||| ||||| |||| |||| ||||||||||| |||| Sbjct: 390 tgcaggtgggcgtgaaggcgcccgggaccgcgaacaggaccaccttcttgcccgcgg 334
>emb|AL132698.1|PPAL00008 Scherffelia dubia EST clone 48; putative peroxiredoxin Length = 658 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 477 ctgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgcc 529 ||||||||||| ||||| || || |||||| | ||||||| |||||||||||| Sbjct: 423 ctgcaggtgggtgtgaacgctcctgggacggcaaagaggacgaccttcttgcc 371
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 474 ttgctgcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgcc 529 ||||||||||| || |||||||||||||| || ||||| || | ||||||||||| Sbjct: 6196580 ttgctgcaggtcggcgtgaaggcgccgggaacaccgaacagaaccaccttcttgcc 6196635
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 479 gcaggtgggggtgaaggcgccggggacgccgaagaggatgaccttcttgcc 529 |||||| |||||||| |||||||||||| ||| ||| |||||||||||| Sbjct: 2139253 gcaggtcggggtgaacgcgccggggacggagaacagggcgaccttcttgcc 2139203
>gb|AY584753.1| Chaetomium globosum probable peroxisomal membrane protein gene, complete cds Length = 731 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 483 gtgggggtgaaggcgccggggacgccgaagagga 516 ||||| |||||||||||||||||| ||| ||||| Sbjct: 279 gtgggcgtgaaggcgccggggacggcgacgagga 246
>gb|AY555771.1| Chaetomium globosum probable peroxisomal membrane protein mRNA, complete cds Length = 747 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 483 gtgggggtgaaggcgccggggacgccgaagagga 516 ||||| |||||||||||||||||| ||| ||||| Sbjct: 254 gtgggcgtgaaggcgccggggacggcgacgagga 221
>gb|AE005738.1| Caulobacter crescentus CB15 section 64 of 359 of the complete genome Length = 10037 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 519 accttcttgccggcggccaggg 540 |||||||||||||||||||||| Sbjct: 5621 accttcttgccggcggccaggg 5600
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 gcaggtgggggtgaaggcgcc 499 ||||||||||||||||||||| Sbjct: 1429837 gcaggtgggggtgaaggcgcc 1429857
>gb|AE006000.1| Caulobacter crescentus CB15 section 326 of 359 of the complete genome Length = 12299 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 479 gcaggtgggggtgaaggcgccggggacgccgaa 511 |||||| ||||||||||||||||| ||| |||| Sbjct: 2320 gcaggtcggggtgaaggcgccgggcacggcgaa 2352
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 gcaggtgggggtgaaggcgcc 499 ||||||||||||||||||||| Sbjct: 1015499 gcaggtgggggtgaaggcgcc 1015479
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 gggagtggatcgagacctgct 558 ||||||||||||||||||||| Sbjct: 5263497 gggagtggatcgagacctgct 5263477
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tgctgcaggtgggggtgaaggcgc 498 ||||||||||||||| |||||||| Sbjct: 125970 tgctgcaggtgggggagaaggcgc 125993
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 214 tgaccttgaggtcgtcagcaagga 237 ||||||||||||| |||||||||| Sbjct: 642921 tgaccttgaggtcatcagcaagga 642898
>gb|AE009245.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 15 of 187 of the complete sequence Length = 12796 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 atgaccttcttgccggcggc 535 |||||||||||||||||||| Sbjct: 5984 atgaccttcttgccggcggc 6003
>gb|AE008368.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 172 of 187 of the complete sequence Length = 13928 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 atgaccttcttgccggcggc 535 |||||||||||||||||||| Sbjct: 7945 atgaccttcttgccggcggc 7926
>gb|AC157659.2| Mus musculus BAC clone RP23-275J9 from chromosome 6, complete sequence Length = 210200 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 gctgattgctgcaggtgggg 488 |||||||||||||||||||| Sbjct: 121338 gctgattgctgcaggtgggg 121357
>ref|XM_823671.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.02.4750) partial mRNA Length = 2751 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cagcaaggagagcaaagcgc 248 |||||||||||||||||||| Sbjct: 1555 cagcaaggagagcaaagcgc 1574
>ref|XM_743565.1| Aspergillus fumigatus Af293 maltose O-acetyltransferase (Afu3g03380) partial mRNA Length = 648 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ttcctcgatgtttgcgacgg 213 |||||||||||||||||||| Sbjct: 463 ttcctcgatgtttgcgacgg 444
>ref|XM_746035.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g12500) partial mRNA Length = 663 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 367 cccatgccttcatgacaaaggggtcatt 394 |||| |||||||| |||||||||||||| Sbjct: 436 cccaggccttcatcacaaaggggtcatt 409
>ref|XM_380529.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00353.1) partial mRNA Length = 567 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 gccttcatgacaaaggggtc 391 |||||||||||||||||||| Sbjct: 335 gccttcatgacaaaggggtc 316
>ref|XM_570263.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND02400) partial mRNA Length = 9246 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 214 tgaccttgaggtcgtcagcaagga 237 ||||||||||||| |||||||||| Sbjct: 5824 tgaccttgaggtcatcagcaagga 5801
>emb|BX548003.29| Zebrafish DNA sequence from clone DKEY-97I5 in linkage group 9, complete sequence Length = 145468 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/35 (91%), Gaps = 2/35 (5%) Strand = Plus / Minus Query: 373 ccttcatgacaaaggg--gtcattaacgctgacaa 405 ||||||||||||| || ||||||||||||||||| Sbjct: 118400 ccttcatgacaaaaggatgtcattaacgctgacaa 118366
>emb|AL136084.11| Human DNA sequence from clone RP11-92C4 on chromosome 9q22.33-31.3 Contains the GALNT12 gene for UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12), the 5' end of the COL15A1 gene for collagen type XV, alpha 1, a novel gene, a non-metastatic cells 2, protein (NM23B) expressed in (NME2) pseudogene and a CpG island, complete sequence Length = 149930 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 accagagattgtgaactggc 189 |||||||||||||||||||| Sbjct: 139341 accagagattgtgaactggc 139322
>emb|Y08703.2|RMSLYE Rhizobium meliloti partial galactoglucan operon, strain EFB1 Length = 8196 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 gaccttcttgccggcggccaggga 541 ||||||||||||||||| |||||| Sbjct: 5373 gaccttcttgccggcggtcaggga 5396
>emb|AL606512.8| Mouse DNA sequence from clone RP23-155D19 on chromosome 11, complete sequence Length = 157494 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 tctttgcccatgccttcatg 380 |||||||||||||||||||| Sbjct: 82039 tctttgcccatgccttcatg 82020
>emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in linkage group 9, complete sequence Length = 219065 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 caccagagattgtgaactgg 188 |||||||||||||||||||| Sbjct: 169065 caccagagattgtgaactgg 169046
>gb|AC087516.12| Homo sapiens chromosome 15, clone RP11-475A13, complete sequence Length = 187299 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 ctcagcttgagtaatgaagc 459 |||||||||||||||||||| Sbjct: 153791 ctcagcttgagtaatgaagc 153810
>gb|AC026970.7| Homo sapiens chromosome 11, clone RP11-472K20, complete sequence Length = 132987 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 caaggaacttcacatgcttg 347 |||||||||||||||||||| Sbjct: 46655 caaggaacttcacatgcttg 46636
>gb|AF320600.1|AF320600S1 Mus musculus NKR-P1F (Nkrp1f) gene, exons 2-6, and C lectin-related protein A gene, complete cds Length = 64931 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 gctgattgctgcaggtgggg 488 |||||||||||||||||||| Sbjct: 4604 gctgattgctgcaggtgggg 4623
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 caggtgggggtgaaggcgccggggacgccgaa 511 ||||||||||||||||| ||||| ||| |||| Sbjct: 3520664 caggtgggggtgaaggccccgggcacggcgaa 3520695
>gb|AC160562.2| Mus musculus BAC clone RP23-9A12 from chromosome 9, complete sequence Length = 241034 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gtcagcaaggagagcaaagc 246 |||||||||||||||||||| Sbjct: 57661 gtcagcaaggagagcaaagc 57680
>gb|AY974142.1| Pinus resinosa p-166-2_1 (p-166-2) mRNA, partial cds Length = 620 Score = 40.1 bits (20), Expect = 8.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 339 acatgcttgttctctgggtatgtctttgcccatgccttcatgacaaaggggtcatt 394 ||||||||||| | || |||||||| |||||| ||||||| || || |||||||| Sbjct: 121 acatgcttgttgtttgtatatgtcttcgcccattccttcatcacgaatgggtcatt 66
>gb|AC068069.12|AC068069 Homo sapiens chromosome 15 clone RP11-11B2, complete sequence Length = 175036 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 ctcagcttgagtaatgaagc 459 |||||||||||||||||||| Sbjct: 149754 ctcagcttgagtaatgaagc 149735
>gb|AF261108.1|AF261108 Homo sapiens type XV collagen (COL15A1) gene, promoter sequence and exon 1, partial sequence Length = 5497 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 accagagattgtgaactggc 189 |||||||||||||||||||| Sbjct: 3233 accagagattgtgaactggc 3214
>gb|AE004929.1| Pseudomonas aeruginosa PAO1, section 490 of 529 of the complete genome Length = 10638 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 ggtgggggtgaaggcgccgg 501 |||||||||||||||||||| Sbjct: 9641 ggtgggggtgaaggcgccgg 9622
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 ggacgccgaagaggatgacc 521 |||||||||||||||||||| Sbjct: 1522384 ggacgccgaagaggatgacc 1522403
>emb|AL662922.10| Mouse DNA sequence from clone RP23-195K1 on chromosome X, complete sequence Length = 215916 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 aaaagttcaaactacattga 93 |||||||||||||||||||| Sbjct: 173695 aaaagttcaaactacattga 173714 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaaagttcaaactacattga 45 |||||||||||||||||||| Sbjct: 173695 aaaagttcaaactacattga 173714
>gb|AY111433.1| Zea mays CL2748_2 mRNA sequence Length = 509 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gctcctacagtgccttgagg 158 |||||||||||||||||||| Sbjct: 274 gctcctacagtgccttgagg 255
>gb|AC174446.2| Mus musculus BAC clone RP23-356N23 from chromosome 6, complete sequence Length = 193034 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 gctgattgctgcaggtgggg 488 |||||||||||||||||||| Sbjct: 190852 gctgattgctgcaggtgggg 190833
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 ggacgccgaagaggatgacc 521 |||||||||||||||||||| Sbjct: 1198385 ggacgccgaagaggatgacc 1198404
>gb|U12683.1|XLU12683 Xenopus laevis integrin alpha5 subunit mRNA, complete cds Length = 5159 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 aaagttcaaactacattgac 94 |||||||||||||||||||| Sbjct: 3281 aaagttcaaactacattgac 3300 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 aaagttcaaactacattgac 46 |||||||||||||||||||| Sbjct: 3281 aaagttcaaactacattgac 3300
>emb|AL137863.15| Human DNA sequence from clone RP4-592P18 on chromosome 11p12-14.1. Contains GSSs, complete sequence Length = 34537 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 caaggaacttcacatgcttg 347 |||||||||||||||||||| Sbjct: 12616 caaggaacttcacatgcttg 12635 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,499,895 Number of Sequences: 3902068 Number of extensions: 5499895 Number of successful extensions: 128225 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 127486 Number of HSP's gapped (non-prelim): 732 length of query: 648 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 625 effective length of database: 17,143,297,704 effective search space: 10714561065000 effective search space used: 10714561065000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)