>YBFF_ECOLI (P75736) Esterase ybfF (EC 3.1.-.-)|
          Length = 254

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -1

Query: 403 HVLEDAGHWVHADNPDGLFRIL 338
           HV+  AGHWVHA+ PD + R +
Sbjct: 227 HVIAGAGHWVHAEKPDAVLRAI 248

>PHR_BACPF (Q04449) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA|
           photolyase) (Photoreactivating enzyme) (Fragment)
          Length = 339

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 5   YDEIDNYMLVLLQYNNRTPAVCHYIHGPWKKRMNERMHYQAQ 130
           +DE   Y+   +   N  P   HYIH PWK    E++ Y+ +
Sbjct: 271 FDENGTYIRTYIPELNHVPD--HYIHEPWKMSEEEQVKYKCR 310

>TFB4_DEBHA (Q6BL86) RNA polymerase II transcription factor B subunit 4 (RNA|
           polymerase II transcription factor B p34 subunit) (RNA
           polymerase II transcription factor B 34 kDa subunit)
          Length = 387

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 385 GHWVHADNPDGLFRILSSTFRVETSIR 305
           G ++H  NP+GL + LS+ F +E SIR
Sbjct: 271 GVYLHIANPEGLIQTLSTAFFIEPSIR 297

>PPME1_CRYNE (Q5KBD8) Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1)|
          Length = 422

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 406 MHVLEDAGHWVHADNPDGLFRILSSTFRVETSI 308
           + V+ D GH++H DNP GL   L + +   T +
Sbjct: 363 LEVMSDVGHYLHEDNPAGLAATLITFWHRNTRV 395

>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding|
           protein RBP1)
          Length = 672

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +2

Query: 152 QFALCLSFVILQNWNASTPM*SMCIVVHGRPARLQWRCGSTVWSSVPSLP 301
           +FAL L+   L N+ + T   S       R  RL W  G+T+ SS+PS P
Sbjct: 142 KFALSLNATPLPNFYSPTTN-SQTNPTFKRTFRLNWASGATLQSSIPSTP 190


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,367,800
Number of Sequences: 219361
Number of extensions: 2136413
Number of successful extensions: 5837
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5836
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)