| Clone Name | rbags20n10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | VNUC_MABVP (P35263) Nucleoprotein (Nucleocapsid protein) | 28 | 7.8 | 2 | VNUC_MABVM (P27588) Nucleoprotein (Nucleocapsid protein) | 28 | 7.8 |
|---|
>VNUC_MABVP (P35263) Nucleoprotein (Nucleocapsid protein)| Length = 695 Score = 27.7 bits (60), Expect = 7.8 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = +1 Query: 22 IAQVLSTERLIHKYHKTKDEITHKRT*YEPSQILLTLHYIRAKISNIISDLESS 183 IA+ +++ ++H K EITH SQ L L R K++ + +++E++ Sbjct: 348 IAEDDEERKILEQFHLQKTEITH-------SQTLAVLSQKREKLARLAAEIENN 394
>VNUC_MABVM (P27588) Nucleoprotein (Nucleocapsid protein)| Length = 692 Score = 27.7 bits (60), Expect = 7.8 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = +1 Query: 22 IAQVLSTERLIHKYHKTKDEITHKRT*YEPSQILLTLHYIRAKISNIISDLESS 183 IA+ +++ ++H K EITH SQ L L R K++ + +++E++ Sbjct: 348 IAEDDEERKILEQFHLQKTEITH-------SQTLAVLSQKREKLARLAAEIENN 394 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,925,186 Number of Sequences: 219361 Number of extensions: 583723 Number of successful extensions: 982 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 975 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 981 length of database: 80,573,946 effective HSP length: 72 effective length of database: 64,779,954 effective search space used: 1554718896 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)