| Clone Name | rbags20n07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098J24, full insert sequence Length = 2265 Score = 323 bits (163), Expect = 4e-85 Identities = 446/538 (82%), Gaps = 3/538 (0%) Strand = Plus / Minus Query: 96 agaattgtcggagcaatccttgggaagagaaacataatttgccggtatagaagcagctgt 155 ||||||||| ||||||||||||||||| | ||||| |||||||||||| ||| ||||| Sbjct: 1854 agaattgtctgagcaatccttgggaagggccacatagtttgccggtata-aag--gctgt 1798 Query: 156 cttgccagtgtccttcatctttccacaagacaagcctcccttgcgtgaaattggggtaga 215 ||||||||| || |||| |||||| ||||||||||||||||||||| || |||||| | Sbjct: 1797 cttgccagtctctttcacttttccagaagacaagcctcccttgcgtgccatcggggtaca 1738 Query: 216 cacacgccggttgttaggagttccaccaacaatgttgacattagtactctgcccaagagg 275 ||||| ||| || |||||||||||| | |||||| | || | |||||||||||||| Sbjct: 1737 gacacggcggctggtaggagttccactgattatgttggcgttcgagctctgcccaagagg 1678 Query: 276 tttccttgccgaaagcgggcgcataggactaggcttcgctccataggttgcaccttgttc 335 ||||| |||||| | || ||| ||| || ||||||| |||| | || ||||||||||| Sbjct: 1677 cttcctagccgaaggtggacgcgcagggcttggcttcgttccaaacgtagcaccttgttc 1618 Query: 336 tgctgcaaactgctcttgtagtttcttaagttcccgtgatcggcgtttttcctcttcctt 395 ||||||| |||| ||||| |||||||| || ||||| ||||| ||||| ||||| || || Sbjct: 1617 tgctgcatactgttcttgcagtttcttgagctcccgcgatcgccgtttctcctcatcttt 1558 Query: 396 ttgttgcctttcagaggtgtatttgtccaagctatccaaaagcctcatcttattatacag 455 || || ||| |||||||||| || || |||||||| ||||| ||||||| ||||| Sbjct: 1557 ctgctgtcttcttgaggtgtattcttctaaactatccaacagccttatcttatcatacat 1498 Query: 456 aaatggcgcgcccttctccttttcccaagctctaactttagcagtcaaattctccagcag 515 |||||| | || |||||||||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 1497 aaatgggacaccgttctccttttcccaagctttaattttagcagttaaattctccagcag 1438 Query: 516 ggatggaattttgctgaccaatacccttgccttctccgcacgcttgagatttatgtgagc 575 |||||||||||||| |||| | |||||| || || || ||||||||||| ||||||| Sbjct: 1437 agatggaattttgctaaccagcatccttgctttttcagcgtgcttgagatttttgtgagc 1378 Query: 576 tcctcgaccagcattatagcgattttgatccccctcatattcaccgagccaaccctcc 633 |||||||||||||||||||||||| |||||| ||||||||| | ||||||| |||| Sbjct: 1377 tcctcgaccagcattatagcgattctgatccttttcatattcatcaagccaactctcc 1320
>ref|XM_475231.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1713 Score = 315 bits (159), Expect = 1e-82 Identities = 445/538 (82%), Gaps = 3/538 (0%) Strand = Plus / Minus Query: 96 agaattgtcggagcaatccttgggaagagaaacataatttgccggtatagaagcagctgt 155 ||||||||| ||||||||||||||||| | ||||| |||||||||||| ||| ||||| Sbjct: 1704 agaattgtctgagcaatccttgggaagggccacatagtttgccggtata-aag--gctgt 1648 Query: 156 cttgccagtgtccttcatctttccacaagacaagcctcccttgcgtgaaattggggtaga 215 |||||||| || |||| |||||| ||||||||||||||||||||| || |||||| | Sbjct: 1647 cttgccagcctctttcacttttccagaagacaagcctcccttgcgtgccatcggggtaca 1588 Query: 216 cacacgccggttgttaggagttccaccaacaatgttgacattagtactctgcccaagagg 275 ||||| ||| || |||||||||||| | |||||| | || | |||||||||||||| Sbjct: 1587 gacacggcggctggtaggagttccactgattatgttggcgttcgagctctgcccaagagg 1528 Query: 276 tttccttgccgaaagcgggcgcataggactaggcttcgctccataggttgcaccttgttc 335 ||||| |||||| | || ||| ||| || ||||||| |||| | || ||||||||||| Sbjct: 1527 cttcctagccgaaggtggacgcgcagggcttggcttcgttccaaacgtagcaccttgttc 1468 Query: 336 tgctgcaaactgctcttgtagtttcttaagttcccgtgatcggcgtttttcctcttcctt 395 ||||||| |||| ||||| |||||||| || ||||| ||||| ||||| ||||| || || Sbjct: 1467 tgctgcatactgttcttgcagtttcttgagctcccgcgatcgccgtttctcctcatcttt 1408 Query: 396 ttgttgcctttcagaggtgtatttgtccaagctatccaaaagcctcatcttattatacag 455 || || ||| |||||||||| || || |||||||| ||||| ||||||| ||||| Sbjct: 1407 ctgctgtcttcttgaggtgtattcttctaaactatccaacagccttatcttatcatacat 1348 Query: 456 aaatggcgcgcccttctccttttcccaagctctaactttagcagtcaaattctccagcag 515 |||||| | || |||||||||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 1347 aaatgggacaccgttctccttttcccaagctttaattttagcagttaaattctccagcag 1288 Query: 516 ggatggaattttgctgaccaatacccttgccttctccgcacgcttgagatttatgtgagc 575 |||||||||||||| |||| | |||||| || || || ||||||||||| ||||||| Sbjct: 1287 agatggaattttgctaaccagcatccttgctttttcagcgtgcttgagatttttgtgagc 1228 Query: 576 tcctcgaccagcattatagcgattttgatccccctcatattcaccgagccaaccctcc 633 |||||||||||||||||||||||| |||||| ||||||||| | ||||||| |||| Sbjct: 1227 tcctcgaccagcattatagcgattctgatccttttcatattcatcaagccaactctcc 1170
>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0014K18, complete sequence Length = 123508 Score = 143 bits (72), Expect = 8e-31 Identities = 220/267 (82%), Gaps = 3/267 (1%) Strand = Plus / Minus Query: 96 agaattgtcggagcaatccttgggaagagaaacataatttgccggtatagaagcagctgt 155 ||||||||| ||||||||||||||||| | ||||| |||||||||||| ||| ||||| Sbjct: 102059 agaattgtctgagcaatccttgggaagggccacatagtttgccggtata-aag--gctgt 102003 Query: 156 cttgccagtgtccttcatctttccacaagacaagcctcccttgcgtgaaattggggtaga 215 |||||||| || |||| |||||| ||||||||||||||||||||| || |||||| | Sbjct: 102002 cttgccagcctctttcacttttccagaagacaagcctcccttgcgtgccatcggggtaca 101943 Query: 216 cacacgccggttgttaggagttccaccaacaatgttgacattagtactctgcccaagagg 275 ||||| ||| || |||||||||||| | |||||| | || | |||||||||||||| Sbjct: 101942 gacacggcggctggtaggagttccactgattatgttggcgttcgagctctgcccaagagg 101883 Query: 276 tttccttgccgaaagcgggcgcataggactaggcttcgctccataggttgcaccttgttc 335 ||||| |||||| | || ||| ||| || ||||||| |||| | || ||||||||||| Sbjct: 101882 cttcctagccgaaggtggacgcgcagggcttggcttcgttccaaacgtagcaccttgttc 101823 Query: 336 tgctgcaaactgctcttgtagtttctt 362 ||||||| |||| ||||| |||||||| Sbjct: 101822 tgctgcatactgttcttgcagtttctt 101796 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 518 atggaattttgctgaccaatacccttgccttctccgcacgcttgagatttatgtgagctc 577 ||||||||||||| |||| | |||||| || || || ||||||||||| ||||||||| Sbjct: 100767 atggaattttgctaaccagcatccttgctttttcagcgtgcttgagatttttgtgagctc 100708 Query: 578 ctcgaccagcattatagcgattttgatcc 606 |||||||||||||||||||||| |||||| Sbjct: 100707 ctcgaccagcattatagcgattctgatcc 100679 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 444 cttattatacagaaatggcgcgcccttctccttttcccaagctctaactttagcagtcaa 503 ||||| ||||| |||||| | || |||||||||||||||||| ||| ||||||||| || Sbjct: 101252 cttatcatacataaatgggacaccgttctccttttcccaagctttaattttagcagttaa 101193 Query: 504 attctccagcag 515 |||||||||||| Sbjct: 101192 attctccagcag 101181
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 143 bits (72), Expect = 8e-31 Identities = 220/267 (82%), Gaps = 3/267 (1%) Strand = Plus / Minus Query: 96 agaattgtcggagcaatccttgggaagagaaacataatttgccggtatagaagcagctgt 155 ||||||||| ||||||||||||||||| | ||||| |||||||||||| ||| ||||| Sbjct: 19849435 agaattgtctgagcaatccttgggaagggccacatagtttgccggtata-aag--gctgt 19849379 Query: 156 cttgccagtgtccttcatctttccacaagacaagcctcccttgcgtgaaattggggtaga 215 |||||||| || |||| |||||| ||||||||||||||||||||| || |||||| | Sbjct: 19849378 cttgccagcctctttcacttttccagaagacaagcctcccttgcgtgccatcggggtaca 19849319 Query: 216 cacacgccggttgttaggagttccaccaacaatgttgacattagtactctgcccaagagg 275 ||||| ||| || |||||||||||| | |||||| | || | |||||||||||||| Sbjct: 19849318 gacacggcggctggtaggagttccactgattatgttggcgttcgagctctgcccaagagg 19849259 Query: 276 tttccttgccgaaagcgggcgcataggactaggcttcgctccataggttgcaccttgttc 335 ||||| |||||| | || ||| ||| || ||||||| |||| | || ||||||||||| Sbjct: 19849258 cttcctagccgaaggtggacgcgcagggcttggcttcgttccaaacgtagcaccttgttc 19849199 Query: 336 tgctgcaaactgctcttgtagtttctt 362 ||||||| |||| ||||| |||||||| Sbjct: 19849198 tgctgcatactgttcttgcagtttctt 19849172 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 518 atggaattttgctgaccaatacccttgccttctccgcacgcttgagatttatgtgagctc 577 ||||||||||||| |||| | |||||| || || || ||||||||||| ||||||||| Sbjct: 19848143 atggaattttgctaaccagcatccttgctttttcagcgtgcttgagatttttgtgagctc 19848084 Query: 578 ctcgaccagcattatagcgattttgatcc 606 |||||||||||||||||||||| |||||| Sbjct: 19848083 ctcgaccagcattatagcgattctgatcc 19848055 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 444 cttattatacagaaatggcgcgcccttctccttttcccaagctctaactttagcagtcaa 503 ||||| ||||| |||||| | || |||||||||||||||||| ||| ||||||||| || Sbjct: 19848628 cttatcatacataaatgggacaccgttctccttttcccaagctttaattttagcagttaa 19848569 Query: 504 attctccagcag 515 |||||||||||| Sbjct: 19848568 attctccagcag 19848557
>gb|AY110873.1| Zea mays CL10452_1 mRNA sequence Length = 517 Score = 89.7 bits (45), Expect = 1e-14 Identities = 132/161 (81%) Strand = Plus / Plus Query: 232 ggagttccaccaacaatgttgacattagtactctgcccaagaggtttccttgccgaaagc 291 ||||||||||||| ||| ||| |||||| |||||||||||||| ||||||| ||||| Sbjct: 243 ggagttccaccaataatattggcattagagctctgcccaagaggcttccttgaagaaaga 302 Query: 292 gggcgcataggactaggcttcgctccataggttgcaccttgttctgctgcaaactgctct 351 || || ||||| || || |||| ||| | | |||||||| |||| |||||||| ||| Sbjct: 303 ggacggatagggcttggtttcgttccgaacttggcaccttgctctgtagcaaactgttct 362 Query: 352 tgtagtttcttaagttcccgtgatcggcgtttttcctcttc 392 || |||||||| | ||||| ||||||||| ||||||||||| Sbjct: 363 tgcagtttcttcaattcccttgatcggcgcttttcctcttc 403 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 472 tccttttcccaagctctaactttagcagtcaa 503 ||||||||||| ||| ||| |||||||||||| Sbjct: 483 tccttttcccaggctttaattttagcagtcaa 514
>ref|XM_470643.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1824 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 540 ccttgccttctccgcacgcttgagatttat 569 |||||||||||| ||||||||||||||||| Sbjct: 1302 ccttgccttctctgcacgcttgagatttat 1273
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 540 ccttgccttctccgcacgcttgagatttat 569 |||||||||||| ||||||||||||||||| Sbjct: 7249374 ccttgccttctctgcacgcttgagatttat 7249403
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 540 ccttgccttctccgcacgcttgagatttat 569 |||||||||||| ||||||||||||||||| Sbjct: 630 ccttgccttctctgcacgcttgagatttat 659
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 540 ccttgccttctccgcacgcttgagatttat 569 |||||||||||| ||||||||||||||||| Sbjct: 7247269 ccttgccttctctgcacgcttgagatttat 7247298
>gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1081D05, complete sequence Length = 99133 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 540 ccttgccttctccgcacgcttgagatttat 569 |||||||||||| ||||||||||||||||| Sbjct: 76127 ccttgccttctctgcacgcttgagatttat 76156
>dbj|AK066517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069B13, full insert sequence Length = 1788 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 540 ccttgccttctccgcacgcttgagatttat 569 |||||||||||| ||||||||||||||||| Sbjct: 1648 ccttgccttctctgcacgcttgagatttat 1619
>dbj|AK067660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116C06, full insert sequence Length = 3638 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 540 ccttgccttctccgcacgcttgagatttat 569 |||||||||||| ||||||||||||||||| Sbjct: 1603 ccttgccttctctgcacgcttgagatttat 1574
>dbj|AK065181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D18, full insert sequence Length = 2554 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 540 ccttgccttctccgcacgcttgagatttat 569 |||||||||||| ||||||||||||||||| Sbjct: 1602 ccttgccttctctgcacgcttgagatttat 1573
>dbj|AK064951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P23, full insert sequence Length = 3153 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 540 ccttgccttctccgcacgcttgagatttat 569 |||||||||||| ||||||||||||||||| Sbjct: 1605 ccttgccttctctgcacgcttgagatttat 1576
>gb|AY786506.1| Zinnia elegans microtubule associated protein (MAP65) mRNA, complete cds Length = 2048 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 520 ggaattttgctgaccaatacccttgccttctccgcacgcttgagattta 568 |||||||| |||||||| || || |||||||| || ||||||||||||| Sbjct: 1409 ggaattttactgaccaaaactctagccttctcagctcgcttgagattta 1361
>gb|AC104236.2| Homo sapiens chromosome 15, clone RP11-24J19, complete sequence Length = 160392 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 387 ctcttccttttgttgcctttca 408 |||||||||||||||||||||| Sbjct: 83768 ctcttccttttgttgcctttca 83789
>dbj|AP006110.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT39G11, TM0195b, complete sequence Length = 52245 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 gttccaccaacaatgttgaca 255 ||||||||||||||||||||| Sbjct: 36939 gttccaccaacaatgttgaca 36919
>gb|AC121279.7| Mus musculus chromosome 3, clone RP23-4F17, complete sequence Length = 207763 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 atgaaattacaagctagaga 58 |||||||||||||||||||| Sbjct: 133409 atgaaattacaagctagaga 133428
>gb|AC007393.3| Homo sapiens BAC clone RP11-451J3 from 7, complete sequence Length = 71082 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 gcccttctccttttcccaag 484 |||||||||||||||||||| Sbjct: 39645 gcccttctccttttcccaag 39626
>gb|AF301553.1| Gallus gallus collapsin response mediator protein-4B (CRMP4B) mRNA, complete cds Length = 2202 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gtttttcctcttccttttgt 399 |||||||||||||||||||| Sbjct: 1971 gtttttcctcttccttttgt 1990
>emb|BX511129.15| Zebrafish DNA sequence from clone RP71-68N21 in linkage group 9, complete sequence Length = 152922 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gcattaacaagcagttaaac 20 |||||||||||||||||||| Sbjct: 26027 gcattaacaagcagttaaac 26046
>emb|BX321882.7| Zebrafish DNA sequence from clone DKEYP-30F1 in linkage group 12, complete sequence Length = 187475 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gcattaacaagcagttaaac 20 |||||||||||||||||||| Sbjct: 14520 gcattaacaagcagttaaac 14501
>emb|AL590617.10| Human DNA sequence from clone RP11-390P2 on chromosome 6, complete sequence Length = 124699 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tcatctttccacaagacaag 189 |||||||||||||||||||| Sbjct: 29643 tcatctttccacaagacaag 29662
>emb|AL732408.4| Mouse DNA sequence from clone RP23-135A24 on chromosome 13 Contains a prolactin (Prl) pseudogene and the 3' end of the Plfr gene for proliferin related protein, complete sequence Length = 29333 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cattttcacatgcaagaatt 101 |||||||||||||||||||| Sbjct: 25894 cattttcacatgcaagaatt 25875
>ref|NM_204493.1| Gallus gallus dihydropyrimidinase-like 3 (DPYSL3), mRNA Length = 2202 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gtttttcctcttccttttgt 399 |||||||||||||||||||| Sbjct: 1971 gtttttcctcttccttttgt 1990
>gb|AC138019.26| Papio anubis clone rp41-133b2, complete sequence Length = 204007 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gctgtcttgccagtgtcctt 170 |||||||||||||||||||| Sbjct: 102447 gctgtcttgccagtgtcctt 102466
>emb|BX323593.12| Zebrafish DNA sequence from clone DKEY-107I18 in linkage group 14, complete sequence Length = 198776 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ttaacaagcagttaaaccta 23 |||||||||||||||||||| Sbjct: 108919 ttaacaagcagttaaaccta 108900
>dbj|AK030276.1| Mus musculus 11 days pregnant adult female ovary and uterus cDNA, RIKEN full-length enriched library, clone:5031402A17 product:PROLIFERIN-RELATED PROTEIN PRECURSOR, full insert sequence Length = 3658 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cattttcacatgcaagaatt 101 |||||||||||||||||||| Sbjct: 3271 cattttcacatgcaagaatt 3290
>emb|BX255929.7| Zebrafish DNA sequence from clone CH211-271P5 in linkage group 14, complete sequence Length = 147460 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gcattaacaagcagttaaac 20 |||||||||||||||||||| Sbjct: 73025 gcattaacaagcagttaaac 73006
>ref|XM_393156.2| PREDICTED: Apis mellifera similar to plexus (LOC409658), mRNA Length = 6855 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 ctatccaaaagcctcatctt 446 |||||||||||||||||||| Sbjct: 6410 ctatccaaaagcctcatctt 6391
>emb|CR925754.15| Zebrafish DNA sequence from clone CH211-148J16 in linkage group 6, complete sequence Length = 150312 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gcattaacaagcagttaaac 20 |||||||||||||||||||| Sbjct: 100767 gcattaacaagcagttaaac 100786
>emb|AL831708.9| Mouse DNA sequence from clone RP23-23B17 on chromosome X, complete sequence Length = 113082 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 acattttcacatgcaagaat 100 |||||||||||||||||||| Sbjct: 48909 acattttcacatgcaagaat 48928
>emb|BX001058.4| Zebrafish DNA sequence from clone CH211-14I21, complete sequence Length = 209611 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gcattaacaagcagttaaac 20 |||||||||||||||||||| Sbjct: 39689 gcattaacaagcagttaaac 39670
>emb|BX004822.12| Zebrafish DNA sequence from clone DKEY-18F18, complete sequence Length = 201902 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gcattaacaagcagttaaac 20 |||||||||||||||||||| Sbjct: 54074 gcattaacaagcagttaaac 54055 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,667,488 Number of Sequences: 3902068 Number of extensions: 5667488 Number of successful extensions: 108204 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107999 Number of HSP's gapped (non-prelim): 198 length of query: 633 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 610 effective length of database: 17,143,297,704 effective search space: 10457411599440 effective search space used: 10457411599440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)