ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20n06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_179196.1| Arabidopsis thaliana unknown protein AT4G39390 ... 70 1e-08
2ref|NM_120099.3| Arabidopsis thaliana unknown protein AT4G39390 ... 70 1e-08
3gb|AY142535.1| Arabidopsis thaliana unknown protein (At4g39390) ... 70 1e-08
4gb|AY091057.1| Arabidopsis thaliana unknown protein (At4g39390) ... 70 1e-08
5emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, ... 70 1e-08
6emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, B... 70 1e-08
7emb|BX827463.1|CNS0A2WE Arabidopsis thaliana Full-length cDNA Co... 70 1e-08
8emb|BX827252.1|CNS0A2W6 Arabidopsis thaliana Full-length cDNA Co... 70 1e-08
9gb|AY087403.1| Arabidopsis thaliana clone 35002 mRNA, complete s... 70 1e-08
10ref|XM_466722.1| Oryza sativa (japonica cultivar-group), mRNA 66 2e-07
11gb|AY030360.1| Oryza sativa putative transmembrane protein mRNA,... 66 2e-07
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 66 2e-07
13dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic D... 66 2e-07
14dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic D... 66 2e-07
15dbj|AK072518.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
16dbj|AK069766.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
17gb|AY110235.1| Zea mays CL5463_1 mRNA sequence 60 1e-05
18gb|BT018636.1| Zea mays clone EL01N0504B09.d mRNA sequence 54 6e-04
19gb|AC148397.13| Medicago truncatula clone mth2-22h4, complete se... 54 6e-04
20gb|AY109274.1| Zea mays PCO086103 mRNA sequence 54 6e-04
21dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
22dbj|AK072996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
23dbj|AK060206.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
24gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.009
25emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa... 50 0.009
26ref|XM_476174.1| Oryza sativa (japonica cultivar-group), predic... 48 0.036
27dbj|AK064851.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.036
28gb|AC127291.4| Mus musculus BAC clone RP23-365H24 from 8, comple... 48 0.036
29gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.14
30emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4,... 46 0.14
31dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
33emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 46 0.14
34gb|AC121341.2| Homo sapiens X BAC RP11-655M17 (Roswell Park Canc... 44 0.57
35emb|AL935293.11| Zebrafish DNA sequence from clone CH211-251D10 ... 44 0.57
36emb|AL157836.11| Human DNA sequence from clone RP11-477D14 on ch... 42 2.2
37emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 42 2.2
38gb|AC159028.3| Pan troglodytes BAC clone CH251-413M12 from chrom... 42 2.2
39gb|AC079118.5| Homo sapiens BAC clone RP11-260K18 from 4, comple... 42 2.2
40dbj|AK105118.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
41dbj|AK101335.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
42emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb... 42 2.2
43gb|U34371.1|HSTECTXT05 Human tyrosine kinase TXK (txk) gene, exon 5 42 2.2
44gb|U07792.1|HSTXK Human tyrosine kinase (TXK) gene, exon 8, part... 42 2.2
45ref|XM_646094.1| Entamoeba histolytica HM-1:IMSS protein kinase ... 40 8.9
46ref|XM_734378.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 8.9
47emb|CR626866.4| Zebrafish DNA sequence from clone DKEY-147F20 in... 40 8.9
48gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 8.9
49gb|AC092640.3| Homo sapiens BAC clone RP11-387P12 from 2, comple... 40 8.9
50emb|AL929292.7| Zebrafish DNA sequence from clone DKEY-11L24 in ... 40 8.9
51emb|AL122015.17|HSDJ8L15 Human DNA sequence from clone RP1-8L15 ... 40 8.9
52emb|AL671977.8| Mouse DNA sequence from clone RP23-171A16 on chr... 40 8.9 
>ref|NM_179196.1| Arabidopsis thaliana unknown protein AT4G39390 transcript variant
            AT4G39390.2 mRNA, complete cds
          Length = 1407

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 423  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaa 482
            |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 1032 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 973

                                   
Query: 483  atgaattggctgagattggtccc 505
            |||||||||||||||||||||||
Sbjct: 972  atgaattggctgagattggtccc 950
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>ref|NM_120099.3| Arabidopsis thaliana unknown protein AT4G39390 transcript variant
            AT4G39390.1 mRNA, complete cds
          Length = 1504

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 423  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaa 482
            |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 1110 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 1051

                                   
Query: 483  atgaattggctgagattggtccc 505
            |||||||||||||||||||||||
Sbjct: 1050 atgaattggctgagattggtccc 1028
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>gb|AY142535.1| Arabidopsis thaliana unknown protein (At4g39390) mRNA, complete cds
          Length = 1045

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 423 agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaa 482
           |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 809 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 750

                                  
Query: 483 atgaattggctgagattggtccc 505
           |||||||||||||||||||||||
Sbjct: 749 atgaattggctgagattggtccc 727
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>gb|AY091057.1| Arabidopsis thaliana unknown protein (At4g39390) mRNA, complete cds
          Length = 1383

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 423  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaa 482
            |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 1032 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 973

                                   
Query: 483  atgaattggctgagattggtccc 505
            |||||||||||||||||||||||
Sbjct: 972  atgaattggctgagattggtccc 950
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>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91
          Length = 198151

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                         
Query: 423   agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaa 482
             |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 37819 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 37760

                                    
Query: 483   atgaattggctgagattggtccc 505
             |||||||||||||||||||||||
Sbjct: 37759 atgaattggctgagattggtccc 37737
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>emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, BAC clone F23K16 (ESSA project)
          Length = 129047

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                         
Query: 423   agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaa 482
             |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 12605 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 12546

                                    
Query: 483   atgaattggctgagattggtccc 505
             |||||||||||||||||||||||
Sbjct: 12545 atgaattggctgagattggtccc 12523
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>emb|BX827463.1|CNS0A2WE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS59ZB11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1435

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 423  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaa 482
            |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 1041 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 982

                                   
Query: 483  atgaattggctgagattggtccc 505
            |||||||||||||||||||||||
Sbjct: 981  atgaattggctgagattggtccc 959
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>emb|BX827252.1|CNS0A2W6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS28ZF09 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1278

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 423  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaa 482
            |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 1008 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 949

                                   
Query: 483  atgaattggctgagattggtccc 505
            |||||||||||||||||||||||
Sbjct: 948  atgaattggctgagattggtccc 926
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>gb|AY087403.1| Arabidopsis thaliana clone 35002 mRNA, complete sequence
          Length = 1358

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 423  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaa 482
            |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 1060 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 1001

                                   
Query: 483  atgaattggctgagattggtccc 505
            |||||||||||||||||||||||
Sbjct: 1000 atgaattggctgagattggtccc 978
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>ref|XM_466722.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1411

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 138/173 (79%)
 Strand = Plus / Minus

                                                                        
Query: 369  acgtggaaattcaggccttctttcccgaacaacagaaatcccagggttagcacgagaatt 428
            ||||| ||||| ||||| ||||| || || || ||||| |||| ||| |  || ||||| 
Sbjct: 1040 acgtgaaaattaaggccctcttttccaaagaaaagaaaacccaaggtcaatacaagaatc 981

                                                                        
Query: 429  gtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaaatgaat 488
            |||||||| || || |  |||||||||| ||| || |||||||| |||||||| ||||| 
Sbjct: 980  gtcttcatatggcctagaacttgaaatgagacagctgtgaatcttccaatgcatatgaac 921

                                                                 
Query: 489  tggctgagattggtcccgactgaaataacgcatgacagcacaatgaagaacgt 541
            ||||| ||||||||||| || | |||   ||| ||||  ||||||||||||||
Sbjct: 920  tggcttagattggtcccaacagcaattgtgcacgacaatacaatgaagaacgt 868



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                     
Query: 581 tggtcagccagaagtccacgaatgggcctaatatcaacagtgaagctgcttgagctgg 638
           ||||||||||||||||||| || || || | ||| ||||| || ||||| ||||||||
Sbjct: 829 tggtcagccagaagtccacaaaaggccccagtattaacagggatgctgcctgagctgg 772
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>gb|AY030360.1| Oryza sativa putative transmembrane protein mRNA, complete cds
          Length = 1330

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 138/173 (79%)
 Strand = Plus / Minus

                                                                       
Query: 369 acgtggaaattcaggccttctttcccgaacaacagaaatcccagggttagcacgagaatt 428
           ||||| ||||| ||||| ||||| || || || ||||| |||| ||| |  || ||||| 
Sbjct: 932 acgtgaaaattaaggccctcttttccaaagaaaagaaaacccaaggtcaatacaagaatc 873

                                                                       
Query: 429 gtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaaatgaat 488
           |||||||| || || |  |||||||||| ||| || |||||||| |||||||| ||||| 
Sbjct: 872 gtcttcatatggcctagaacttgaaatgagacagctgtgaatcttccaatgcatatgaac 813

                                                                
Query: 489 tggctgagattggtcccgactgaaataacgcatgacagcacaatgaagaacgt 541
           ||||| ||||||||||| || | |||   ||| ||||  ||||||||||||||
Sbjct: 812 tggcttagattggtcccaacagcaattgtgcacgacaatacaatgaagaacgt 760



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                     
Query: 581 tggtcagccagaagtccacgaatgggcctaatatcaacagtgaagctgcttgagctgg 638
           ||||||||||||||||||| || || || | ||| ||||| || ||||| ||||||||
Sbjct: 721 tggtcagccagaagtccacaaaaggccccagtattaacagggatgctgcctgagctgg 664
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 111/137 (81%)
 Strand = Plus / Plus

                                                                            
Query: 369      acgtggaaattcaggccttctttcccgaacaacagaaatcccagggttagcacgagaatt 428
                ||||| ||||| ||||| ||||| || || || ||||| |||| ||| |  || ||||| 
Sbjct: 24290016 acgtgaaaattaaggccctcttttccaaagaaaagaaaacccaaggtcaatacaagaatc 24290075

                                                                            
Query: 429      gtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaaatgaat 488
                |||||||| || || |  |||||||||| ||| || |||||||| |||||||| ||||| 
Sbjct: 24290076 gtcttcatatggcctagaacttgaaatgagacagctgtgaatcttccaatgcatatgaac 24290135

                                 
Query: 489      tggctgagattggtccc 505
                ||||| |||||||||||
Sbjct: 24290136 tggcttagattggtccc 24290152



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                          
Query: 581      tggtcagccagaagtccacgaatgggcctaatatcaacagtgaagctgcttgagctgg 638
                ||||||||||||||||||| || || || | ||| ||||| || ||||| ||||||||
Sbjct: 24290955 tggtcagccagaagtccacaaaaggccccagtattaacagggatgctgcctgagctgg 24291012
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>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ2055_H10
          Length = 119290

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 111/137 (81%)
 Strand = Plus / Plus

                                                                         
Query: 369   acgtggaaattcaggccttctttcccgaacaacagaaatcccagggttagcacgagaatt 428
             ||||| ||||| ||||| ||||| || || || ||||| |||| ||| |  || ||||| 
Sbjct: 90404 acgtgaaaattaaggccctcttttccaaagaaaagaaaacccaaggtcaatacaagaatc 90463

                                                                         
Query: 429   gtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaaatgaat 488
             |||||||| || || |  |||||||||| ||| || |||||||| |||||||| ||||| 
Sbjct: 90464 gtcttcatatggcctagaacttgaaatgagacagctgtgaatcttccaatgcatatgaac 90523

                              
Query: 489   tggctgagattggtccc 505
             ||||| |||||||||||
Sbjct: 90524 tggcttagattggtccc 90540



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 581   tggtcagccagaagtccacgaatgggcctaatatcaacagtgaagctgcttgagctgg 638
             ||||||||||||||||||| || || || | ||| ||||| || ||||| ||||||||
Sbjct: 91343 tggtcagccagaagtccacaaaaggccccagtattaacagggatgctgcctgagctgg 91400
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>dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0407A09
          Length = 103788

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 111/137 (81%)
 Strand = Plus / Plus

                                                                         
Query: 369   acgtggaaattcaggccttctttcccgaacaacagaaatcccagggttagcacgagaatt 428
             ||||| ||||| ||||| ||||| || || || ||||| |||| ||| |  || ||||| 
Sbjct: 19554 acgtgaaaattaaggccctcttttccaaagaaaagaaaacccaaggtcaatacaagaatc 19613

                                                                         
Query: 429   gtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaaatgaat 488
             |||||||| || || |  |||||||||| ||| || |||||||| |||||||| ||||| 
Sbjct: 19614 gtcttcatatggcctagaacttgaaatgagacagctgtgaatcttccaatgcatatgaac 19673

                              
Query: 489   tggctgagattggtccc 505
             ||||| |||||||||||
Sbjct: 19674 tggcttagattggtccc 19690



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 581   tggtcagccagaagtccacgaatgggcctaatatcaacagtgaagctgcttgagctgg 638
             ||||||||||||||||||| || || || | ||| ||||| || ||||| ||||||||
Sbjct: 20493 tggtcagccagaagtccacaaaaggccccagtattaacagggatgctgcctgagctgg 20550
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>dbj|AK072518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130L12, full
            insert sequence
          Length = 1412

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 138/173 (79%)
 Strand = Plus / Minus

                                                                        
Query: 369  acgtggaaattcaggccttctttcccgaacaacagaaatcccagggttagcacgagaatt 428
            ||||| ||||| ||||| ||||| || || || ||||| |||| ||| |  || ||||| 
Sbjct: 1041 acgtgaaaattaaggccctcttttccaaagaaaagaaaacccaaggtcaatacaagaatc 982

                                                                        
Query: 429  gtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaaatgaat 488
            |||||||| || || |  |||||||||| ||| || |||||||| |||||||| ||||| 
Sbjct: 981  gtcttcatatggcctagaacttgaaatgagacagctgtgaatcttccaatgcatatgaac 922

                                                                 
Query: 489  tggctgagattggtcccgactgaaataacgcatgacagcacaatgaagaacgt 541
            ||||| ||||||||||| || | |||   ||| ||||  ||||||||||||||
Sbjct: 921  tggcttagattggtcccaacagcaattgtgcacgacaatacaatgaagaacgt 869



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                     
Query: 581 tggtcagccagaagtccacgaatgggcctaatatcaacagtgaagctgcttgagctgg 638
           ||||||||||||||||||| || || || | ||| ||||| || ||||| ||||||||
Sbjct: 830 tggtcagccagaagtccacaaaaggccccagtattaacagggatgctgcctgagctgg 773
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>dbj|AK069766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026F21, full
            insert sequence
          Length = 3259

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 111/137 (81%)
 Strand = Plus / Minus

                                                                        
Query: 369  acgtggaaattcaggccttctttcccgaacaacagaaatcccagggttagcacgagaatt 428
            ||||| ||||| ||||| ||||| || || || ||||| |||| ||| |  || ||||| 
Sbjct: 2890 acgtgaaaattaaggccctcttttccaaagaaaagaaaacccaaggtcaatacaagaatc 2831

                                                                        
Query: 429  gtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaaatgaat 488
            |||||||| || || |  |||||||||| ||| || |||||||| |||||||| ||||| 
Sbjct: 2830 gtcttcatatggcctagaacttgaaatgagacagctgtgaatcttccaatgcatatgaac 2771

                             
Query: 489  tggctgagattggtccc 505
            ||||| |||||||||||
Sbjct: 2770 tggcttagattggtccc 2754



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 580  ctggtcagccagaagtccacgaatgggcctaatatcaacagtgaagctgcttgagctgg 638
            |||||||||||||||||||| || || || | ||| ||||| || ||||| ||||||||
Sbjct: 1952 ctggtcagccagaagtccacaaaaggccccagtattaacagggatgctgcctgagctgg 1894
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>gb|AY110235.1| Zea mays CL5463_1 mRNA sequence
          Length = 821

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                       
Query: 408 cccagggttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtg 467
           |||||||| | ||||||||  ||||||||||| || |  ||||| || | |||||| |||
Sbjct: 447 cccagggtcaacacgagaaccgtcttcatgtggcctaggacttggaacgagacggccgtg 506

                                                                       
Query: 468 aatctcccaatgcaaatgaattggctgagattggtcccgactgaaataacgcatgacagc 527
           ||||| || ||||| ||||| ||||| || ||||||||||| | ||| | ||| |||| |
Sbjct: 507 aatcttccgatgcatatgaactggcttaggttggtcccgacagcaattatgcacgacaac 566

                         
Query: 528 acaatgaagaacgt 541
           || || ||||||||
Sbjct: 567 acgataaagaacgt 580
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>gb|BT018636.1| Zea mays clone EL01N0504B09.d mRNA sequence
          Length = 1595

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 423  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaa 482
            |||| |||||||||||| || |  ||||| || | |||||| |||||||| || ||||| 
Sbjct: 1160 agaactgtcttcatgtggcctaggacttggaacgagacggctgtgaatcttccgatgcat 1101

                                   
Query: 483  atgaattggctgagattggtccc 505
            ||||||||||| ||||| |||||
Sbjct: 1100 atgaattggcttagattcgtccc 1078
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>gb|AC148397.13| Medicago truncatula clone mth2-22h4, complete sequence
          Length = 131213

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 468   aatctcccaatgcaaatgaattggctgagattggtcccgactg 510
             ||||| |||||||| || |||||||||||||||||||| ||||
Sbjct: 63064 aatctgccaatgcagataaattggctgagattggtcccaactg 63022
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>gb|AY109274.1| Zea mays PCO086103 mRNA sequence
          Length = 729

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 423 agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcccaatgcaa 482
           |||| |||||||||||| || |  ||||| || | |||||| |||||||| || ||||| 
Sbjct: 184 agaactgtcttcatgtggcctaggacttggaacgagacggctgtgaatcttccgatgcat 125

                                  
Query: 483 atgaattggctgagattggtccc 505
           ||||||||||| ||||| |||||
Sbjct: 124 atgaattggcttagattcgtccc 102
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                    
Query: 327     taccatatcattccaacaatggcgaggatcatcccaa 363
               ||||||||||| |||||||  ||||||||||||||||
Sbjct: 2686632 taccatatcatcccaacaacagcgaggatcatcccaa 2686596



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 327     taccatatcattccaacaatggcgaggatcatcccaa 363
               ||||||||||| |||||||  || |||||||||||||
Sbjct: 2662732 taccatatcatcccaacaacagcaaggatcatcccaa 2662768
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>dbj|AK072996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145H12, full
            insert sequence
          Length = 1509

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 327  taccatatcattccaacaatggcgaggatcatcccaa 363
            ||||||||||| |||||||  ||||||||||||||||
Sbjct: 1095 taccatatcatcccaacaacagcgaggatcatcccaa 1059
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>dbj|AK060206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-A10, full
            insert sequence
          Length = 1628

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 327  taccatatcattccaacaatggcgaggatcatcccaa 363
            ||||||||||| |||||||  ||||||||||||||||
Sbjct: 1032 taccatatcatcccaacaacagcgaggatcatcccaa 996
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                    
Query: 327     taccatatcattccaacaatggcgaggatcatcccaa 363
               ||||||||||| |||||||  ||||||||||||||||
Sbjct: 2686576 taccatatcatcccaacaacagcgaggatcatcccaa 2686540



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 327     taccatatcattccaacaatggcgaggatcatcccaa 363
               ||||||||||| |||||||  || |||||||||||||
Sbjct: 2662676 taccatatcatcccaacaacagcaaggatcatcccaa 2662712
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>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151878

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 327   taccatatcattccaacaatggcgaggatcatcccaa 363
             ||||||||||| |||||||  ||||||||||||||||
Sbjct: 55558 taccatatcatcccaacaacagcgaggatcatcccaa 55522



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 327   taccatatcattccaacaatggcgaggatcatcccaa 363
             ||||||||||| |||||||  || |||||||||||||
Sbjct: 31658 taccatatcatcccaacaacagcaaggatcatcccaa 31694
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>ref|XM_476174.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1008

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 196/252 (77%), Gaps = 1/252 (0%)
 Strand = Plus / Minus

                                                                       
Query: 351 aggatcatcccaaacgccacgtggaaattcaggccttctttcccgaacaacagaaatccc 410
           |||||||| |||| ||| || ||||| || ||||| ||||| || || || ||||| |||
Sbjct: 866 aggatcatgccaatcgcaacatggaagttaaggccctcttttccaaagaaaagaaagccc 807

                                                                       
Query: 411 agggttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaat 470
           | ||| | ||| ||||  ||||||||||| || |  ||||| || | ||| || || |||
Sbjct: 806 aaggtcaacacaagaaccgtcttcatgtggcctagaacttggaacgagactgctgtaaat 747

                                                                       
Query: 471 ctcccaatgcaaatgaattggctgagattggtcccgactgaaataacgcatgacagcaca 530
           || || ||||| ||||||||||| || |||||||| || | ||| | ||| ||||| |  
Sbjct: 746 cttccgatgcatatgaattggctaaggttggtcccaacagcaattatgcacgacagtatg 687

                                                                       
Query: 531 atgaagaacgtcactgtgcctggtgtagtgaaaagtgtcgattctattcctggtcagcca 590
           ||||||||||| ||| |  || ||||| |  ||||| || | ||| ||  ||||||||||
Sbjct: 686 atgaagaacgtaactattgct-gtgtaattgaaagtatcaactcttttgttggtcagcca 628

                       
Query: 591 gaagtccacgaa 602
           ||||||||||||
Sbjct: 627 gaagtccacgaa 616
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>dbj|AK064851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H04, full
            insert sequence
          Length = 1674

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 196/252 (77%), Gaps = 1/252 (0%)
 Strand = Plus / Minus

                                                                        
Query: 351  aggatcatcccaaacgccacgtggaaattcaggccttctttcccgaacaacagaaatccc 410
            |||||||| |||| ||| || ||||| || ||||| ||||| || || || ||||| |||
Sbjct: 1118 aggatcatgccaatcgcaacatggaagttaaggccctcttttccaaagaaaagaaagccc 1059

                                                                        
Query: 411  agggttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaat 470
            | ||| | ||| ||||  ||||||||||| || |  ||||| || | ||| || || |||
Sbjct: 1058 aaggtcaacacaagaaccgtcttcatgtggcctagaacttggaacgagactgctgtaaat 999

                                                                        
Query: 471  ctcccaatgcaaatgaattggctgagattggtcccgactgaaataacgcatgacagcaca 530
            || || ||||| ||||||||||| || |||||||| || | ||| | ||| ||||| |  
Sbjct: 998  cttccgatgcatatgaattggctaaggttggtcccaacagcaattatgcacgacagtatg 939

                                                                        
Query: 531  atgaagaacgtcactgtgcctggtgtagtgaaaagtgtcgattctattcctggtcagcca 590
            ||||||||||| ||| |  || ||||| |  ||||| || | ||| ||  ||||||||||
Sbjct: 938  atgaagaacgtaactattgct-gtgtaattgaaagtatcaactcttttgttggtcagcca 880

                        
Query: 591  gaagtccacgaa 602
            ||||||||||||
Sbjct: 879  gaagtccacgaa 868
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>gb|AC127291.4| Mus musculus BAC clone RP23-365H24 from 8, complete sequence
          Length = 208452

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 145    aatcctcacaatcattttacttttgata 172
              ||||||||||||||| ||||||||||||
Sbjct: 139943 aatcctcacaatcatcttacttttgata 139970
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>gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1076_H08,
             complete sequence
          Length = 148348

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 122/155 (78%)
 Strand = Plus / Plus

                                                                         
Query: 351   aggatcatcccaaacgccacgtggaaattcaggccttctttcccgaacaacagaaatccc 410
             |||||||| |||| ||| || ||||| || ||||| ||||| || || || ||||| |||
Sbjct: 41666 aggatcatgccaatcgcaacatggaagttaaggccctcttttccaaagaaaagaaagccc 41725

                                                                         
Query: 411   agggttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaat 470
             | ||| | ||| ||||  ||||||||||| || |  ||||| || | ||| || || |||
Sbjct: 41726 aaggtcaacacaagaaccgtcttcatgtggcctagaacttggaacgagactgctgtaaat 41785

                                                
Query: 471   ctcccaatgcaaatgaattggctgagattggtccc 505
             || || ||||| ||||||||||| || ||||||||
Sbjct: 41786 cttccgatgcatatgaattggctaaggttggtccc 41820



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 581   tggtcagccagaagtccacgaa 602
             ||||||||||||||||||||||
Sbjct: 43148 tggtcagccagaagtccacgaa 43169
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>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07,
             complete sequence
          Length = 130779

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 415   ttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcc 474
             ||||||| || || ||||||||||| || |  |||||||||| |||||| |||||||| |
Sbjct: 60825 ttagcacaaggatagtcttcatgtgtcccagaacttgaaatgagacggctgtgaatcttc 60884

                    
Query: 475   caatgca 481
              ||||||
Sbjct: 60885 taatgca 60891
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 415      ttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcc 474
                ||||||| || || ||||||||||| || |  |||||||||| |||||| |||||||| |
Sbjct: 25179158 ttagcacaaggatagtcttcatgtgtcccagaacttgaaatgagacggctgtgaatcttc 25179217

                       
Query: 475      caatgca 481
                 ||||||
Sbjct: 25179218 taatgca 25179224
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 122/155 (78%)
 Strand = Plus / Plus

                                                                           
Query: 351     aggatcatcccaaacgccacgtggaaattcaggccttctttcccgaacaacagaaatccc 410
               |||||||| |||| ||| || ||||| || ||||| ||||| || || || ||||| |||
Sbjct: 7086817 aggatcatgccaatcgcaacatggaagttaaggccctcttttccaaagaaaagaaagccc 7086876

                                                                           
Query: 411     agggttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaat 470
               | ||| | ||| ||||  ||||||||||| || |  ||||| || | ||| || || |||
Sbjct: 7086877 aaggtcaacacaagaaccgtcttcatgtggcctagaacttggaacgagactgctgtaaat 7086936

                                                  
Query: 471     ctcccaatgcaaatgaattggctgagattggtccc 505
               || || ||||| ||||||||||| || ||||||||
Sbjct: 7086937 cttccgatgcatatgaattggctaaggttggtccc 7086971



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 581     tggtcagccagaagtccacgaa 602
               ||||||||||||||||||||||
Sbjct: 7088299 tggtcagccagaagtccacgaa 7088320
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>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14,
              complete sequence
          Length = 150187

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                          
Query: 415    ttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctcc 474
              ||||||| || || ||||||||||| || |  |||||||||| |||||| |||||||| |
Sbjct: 126585 ttagcacaaggatagtcttcatgtgtcccagaacttgaaatgagacggctgtgaatcttc 126644

                     
Query: 475    caatgca 481
               ||||||
Sbjct: 126645 taatgca 126651
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>gb|AC121341.2| Homo sapiens X BAC RP11-655M17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177245

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 328    accatatcattccaacaatggc 349
              ||||||||||||||||||||||
Sbjct: 103659 accatatcattccaacaatggc 103680
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>emb|AL935293.11| Zebrafish DNA sequence from clone CH211-251D10 in linkage group 10,
            complete sequence
          Length = 188908

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 547  tgcctggtgtagtgaaaagtgt 568
            ||||||||||||||||||||||
Sbjct: 5570 tgcctggtgtagtgaaaagtgt 5549
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>emb|AL157836.11| Human DNA sequence from clone RP11-477D14 on chromosome 10, complete
              sequence
          Length = 175382

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 153    caatcattttacttttgatat 173
              |||||||||||||||||||||
Sbjct: 113936 caatcattttacttttgatat 113956
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>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 268   ccttctcgctcgccacgccct 288
             |||||||||||||||||||||
Sbjct: 17125 ccttctcgctcgccacgccct 17145
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>gb|AC159028.3| Pan troglodytes BAC clone CH251-413M12 from chromosome unknown,
             complete sequence
          Length = 172935

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 192   aaatagctgacgataagaact 212
             |||||||||||||||||||||
Sbjct: 51093 aaatagctgacgataagaact 51073
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>gb|AC079118.5| Homo sapiens BAC clone RP11-260K18 from 4, complete sequence
          Length = 158801

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 192   aaatagctgacgataagaact 212
             |||||||||||||||||||||
Sbjct: 18965 aaatagctgacgataagaact 18945
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>dbj|AK105118.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A05, full
            insert sequence
          Length = 1843

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 327  taccatatcattccaacaatggcgaggatcatcccaa 363
            ||||||||||| |||||||  || |||||||||||||
Sbjct: 1274 taccatatcatcccaacaacagcaaggatcatcccaa 1238
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>dbj|AK101335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034I10, full
            insert sequence
          Length = 1559

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 327  taccatatcattccaacaatggcgaggatcatcccaa 363
            ||||||||||| |||||||  || |||||||||||||
Sbjct: 1273 taccatatcatcccaacaacagcaaggatcatcccaa 1237
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>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 136490

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 327  taccatatcattccaacaatggcgaggatcatcccaa 363
            ||||||||||| |||||||  || |||||||||||||
Sbjct: 5277 taccatatcatcccaacaacagcaaggatcatcccaa 5241
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>gb|U34371.1|HSTECTXT05 Human tyrosine kinase TXK (txk) gene, exon 5
          Length = 2586

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 192  aaatagctgacgataagaact 212
            |||||||||||||||||||||
Sbjct: 1720 aaatagctgacgataagaact 1740
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>gb|U07792.1|HSTXK Human tyrosine kinase (TXK) gene, exon 8, partial cds
          Length = 2586

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 192  aaatagctgacgataagaact 212
            |||||||||||||||||||||
Sbjct: 1720 aaatagctgacgataagaact 1740
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>ref|XM_646094.1| Entamoeba histolytica HM-1:IMSS protein kinase (178.t00010)
           partial mRNA
          Length = 906

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 91  atttctaacatccctgtagaaaca 114
           ||||||||||||| ||||||||||
Sbjct: 791 atttctaacatccatgtagaaaca 768
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>ref|XM_734378.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000628.01.0)
           partial mRNA
          Length = 1131

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 atcattttacttttgatata 174
           ||||||||||||||||||||
Sbjct: 248 atcattttacttttgatata 229
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>emb|CR626866.4| Zebrafish DNA sequence from clone DKEY-147F20 in linkage group 14,
             complete sequence
          Length = 161413

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 154   aatcattttacttttgatatataa 177
             |||||||| |||||||||||||||
Sbjct: 91042 aatcatttgacttttgatatataa 91065
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 316     acgcgctgctgtaccatatc 335
               ||||||||||||||||||||
Sbjct: 2916247 acgcgctgctgtaccatatc 2916228
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>gb|AC092640.3| Homo sapiens BAC clone RP11-387P12 from 2, complete sequence
          Length = 161788

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   aatcattttacttttgatat 173
             ||||||||||||||||||||
Sbjct: 88075 aatcattttacttttgatat 88056
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>emb|AL929292.7| Zebrafish DNA sequence from clone DKEY-11L24 in linkage group 14,
             complete sequence
          Length = 218922

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   aatcattttacttttgatatataa 177
             |||||||| |||||||||||||||
Sbjct: 24490 aatcatttgacttttgatatataa 24467
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>emb|AL122015.17|HSDJ8L15 Human DNA sequence from clone RP1-8L15 on chromosome 11p13, complete
             sequence
          Length = 111590

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   cattttacttttgatatata 176
             ||||||||||||||||||||
Sbjct: 47331 cattttacttttgatatata 47312
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>emb|AL671977.8| Mouse DNA sequence from clone RP23-171A16 on chromosome X, complete
             sequence
          Length = 193108

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    acatttctaacatccctgtagaaa 112
             ||||||||||||| ||||||||||
Sbjct: 41573 acatttctaacatacctgtagaaa 41596


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,437,055
Number of Sequences: 3902068
Number of extensions: 5437055
Number of successful extensions: 98334
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98059
Number of HSP's gapped (non-prelim): 262
length of query: 649
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 626
effective length of database: 17,143,297,704
effective search space: 10731704362704
effective search space used: 10731704362704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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