>ref|NM_187721.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 651

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 138 cggaaggccttggccagcacgtcggtcggcaccggcgg 175
           |||||||||||||| || ||||||| |||||| |||||
Sbjct: 605 cggaaggccttggcgaggacgtcggacggcacgggcgg 568

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 138      cggaaggccttggccagcacgtcggtcggcaccggcgg 175
                |||||||||||||| || ||||||| |||||| |||||
Sbjct: 10166271 cggaaggccttggcgaggacgtcggacggcacgggcgg 10166308



 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 149      ggccagcacgtcggtcggcaccg 171
                ||||||||||||||| |||||||
Sbjct: 41911155 ggccagcacgtcggtgggcaccg 41911133

>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0581F09
          Length = 154248

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 138    cggaaggccttggccagcacgtcggtcggcaccggcgg 175
              |||||||||||||| || ||||||| |||||| |||||
Sbjct: 113740 cggaaggccttggcgaggacgtcggacggcacgggcgg 113777

>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0498A12
          Length = 159749

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 138   cggaaggccttggccagcacgtcggtcggcaccggcgg 175
             |||||||||||||| || ||||||| |||||| |||||
Sbjct: 31585 cggaaggccttggcgaggacgtcggacggcacgggcgg 31622

>dbj|AK061164.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-A06, full
           insert sequence
          Length = 925

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 138 cggaaggccttggccagcacgtcggtcggcaccggcgg 175
           |||||||||||||| || ||||||| |||||| |||||
Sbjct: 676 cggaaggccttggcgaggacgtcggacggcacgggcgg 639

>gb|AF032974.1|AF032974 Oryza sativa germin-like protein 4 (GER4) mRNA, complete cds
          Length = 908

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 138 cggaaggccttggccagcacgtcggtcggcaccggcgg 175
           |||||||||||||| || ||||||| |||||| |||||
Sbjct: 658 cggaaggccttggcgaggacgtcggacggcacgggcgg 621

>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0004B13
          Length = 142268

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 138   cggaaggccttggccagcacgtcggtcggcaccggcgg 175
             |||||||||||||| || ||||||| |||||| |||||
Sbjct: 90870 cggaaggccttggcgaggacgtcggacggcacgggcgg 90907

>dbj|AP001017.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-712C7, complete
             sequences
          Length = 131000

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 90    ccctacttgaacctggccttg 110
             |||||||||||||||||||||
Sbjct: 73093 ccctacttgaacctggccttg 73113

>gb|AY256972.1| Pseudomonas putida putisolvin synthetase gene, partial cds
          Length = 9199

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 143  ggccttggccagcacgtcgg 162
            ||||||||||||||||||||
Sbjct: 2859 ggccttggccagcacgtcgg 2840

>emb|Z84496.1|HSN75H12 Human DNA sequence from clone LL22NC03-75H12 on chromosome 22, complete
             sequence
          Length = 46144

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    gagagagttgccgacggcagaggc 88
             ||||||||||| ||||||||||||
Sbjct: 45618 gagagagttgcagacggcagaggc 45641

>emb|AL359095.17| Human DNA sequence from clone RP11-70J12 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 32415

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    gacggcagaggctccctact 96
             ||||||||||||||||||||
Sbjct: 28757 gacggcagaggctccctact 28776

>gb|BC037972.1| Homo sapiens, clone IMAGE:5180210, mRNA
          Length = 1008

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 65  gagagagttgccgacggcagaggc 88
           ||||||||||| ||||||||||||
Sbjct: 678 gagagagttgcagacggcagaggc 655

>ref|NM_189765.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 708

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 149 ggccagcacgtcggtcggcaccg 171
           ||||||||||||||| |||||||
Sbjct: 645 ggccagcacgtcggtgggcaccg 623

>ref|XM_500384.1| Yarrowia lipolytica CLIB122, YALI0B01386g predicted mRNA
          Length = 2127

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 149 ggccagcacgtcggtcggcaccg 171
           ||||||||||| |||||||||||
Sbjct: 207 ggccagcacgtgggtcggcaccg 185

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 143    ggccttggccagcacgtcg 161
              |||||||||||||||||||
Sbjct: 679155 ggccttggccagcacgtcg 679173

>gb|AY838860.1| Driloneris longa 28S ribosomal RNA gene, partial sequence
          Length = 3933

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 158  gtcggtcggcaccggcggt 176
            |||||||||||||||||||
Sbjct: 3027 gtcggtcggcaccggcggt 3045

>gb|AF199025.3| Sinorhizobium medicae two component sensor protein A (tcsA) gene,
            partial cds; and two component regulator protein A
            (tcrA), fused sensor regulator protein R (fsrR), low pH
            inducible protein A (lpiA), acid virulence protein B
            (acvB), and two component regulator protein B (tcrB)
            genes, complete cds
          Length = 8015

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 63   tggagagagttgccgacggcaga 85
            ||||||||||||||| |||||||
Sbjct: 6746 tggagagagttgccgtcggcaga 6768

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 160     cggtcggcaccggcggtga 178
               |||||||||||||||||||
Sbjct: 2665359 cggtcggcaccggcggtga 2665341

>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431G06
          Length = 140466

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 149   ggccagcacgtcggtcggcaccg 171
             ||||||||||||||| |||||||
Sbjct: 13232 ggccagcacgtcggtgggcaccg 13210

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 124     cttcgttatcaacccggaaggcc 146
               |||||| ||||||||||||||||
Sbjct: 2385300 cttcgtgatcaacccggaaggcc 2385322

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 124     cttcgttatcaacccggaaggcc 146
               |||||| ||||||||||||||||
Sbjct: 2787352 cttcgtgatcaacccggaaggcc 2787374

>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 149    ggccagcacgtcggtcggcaccg 171
              ||||||||||| |||||||||||
Sbjct: 234250 ggccagcacgtgggtcggcaccg 234228

>dbj|AB010689.1| Pseudomonas putida gene for AhpC, AhpF, complete cds
          Length = 2773

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 124 cttcgttatcaacccggaaggcc 146
           |||||| ||||||||||||||||
Sbjct: 671 cttcgtgatcaacccggaaggcc 693


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,167,530
Number of Sequences: 3902068
Number of extensions: 1167530
Number of successful extensions: 74098
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73535
Number of HSP's gapped (non-prelim): 563
length of query: 183
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 161
effective length of database: 17,147,199,772
effective search space: 2760699163292
effective search space used: 2760699163292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)