>ref|XM_478733.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1480

 Score =  222 bits (112), Expect = 1e-54
 Identities = 145/156 (92%)
 Strand = Plus / Minus

                                                                        
Query: 470  actcagggcatgagtggagtaagttgtttgctgaaaagatcgccaagtgccccacgaaca 529
            ||||||||||||||||| |||||||||||||||||||| || ||||| || |||||||||
Sbjct: 1038 actcagggcatgagtggggtaagttgtttgctgaaaaggtcaccaagggcaccacgaaca 979

                                                                        
Query: 530  tccatctggtcacagcagataagtttagtaattaatggatagaactctcttaggtgcttc 589
            |||||||| ||||||||||||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 978  tccatctgatcacagcagataagttttgtaattaatggatagaactctctgatgtgcttc 919

                                                
Query: 590  ttgaatatctgagcatccatgatgcacattccattc 625
            |||||||||||||| |||||||| ||||||||||||
Sbjct: 918  ttgaatatctgagcgtccatgatacacattccattc 883

>dbj|AK059018.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B01, full
            insert sequence
          Length = 1480

 Score =  222 bits (112), Expect = 1e-54
 Identities = 145/156 (92%)
 Strand = Plus / Minus

                                                                        
Query: 470  actcagggcatgagtggagtaagttgtttgctgaaaagatcgccaagtgccccacgaaca 529
            ||||||||||||||||| |||||||||||||||||||| || ||||| || |||||||||
Sbjct: 1038 actcagggcatgagtggggtaagttgtttgctgaaaaggtcaccaagggcaccacgaaca 979

                                                                        
Query: 530  tccatctggtcacagcagataagtttagtaattaatggatagaactctcttaggtgcttc 589
            |||||||| ||||||||||||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 978  tccatctgatcacagcagataagttttgtaattaatggatagaactctctgatgtgcttc 919

                                                
Query: 590  ttgaatatctgagcatccatgatgcacattccattc 625
            |||||||||||||| |||||||| ||||||||||||
Sbjct: 918  ttgaatatctgagcgtccatgatacacattccattc 883

>gb|AY104122.1| Zea mays PCO092329 mRNA sequence
          Length = 1616

 Score =  186 bits (94), Expect = 6e-44
 Identities = 136/150 (90%)
 Strand = Plus / Minus

                                                                        
Query: 472  tcagggcatgagtggagtaagttgtttgctgaaaagatcgccaagtgccccacgaacatc 531
            ||||||||||||||||||||| |||||||| || ||||| ||||| || |||||||||||
Sbjct: 1198 tcagggcatgagtggagtaagctgtttgctaaagagatcaccaagggctccacgaacatc 1139

                                                                        
Query: 532  catctggtcacagcagataagtttagtaattaatggatagaactctcttaggtgcttctt 591
            |||||| ||||| ||||||||||| ||||||||||||||||||||| | |||||| | ||
Sbjct: 1138 catctgatcacaacagataagtttggtaattaatggatagaactctttcaggtgcctttt 1079

                                          
Query: 592  gaatatctgagcatccatgatgcacattcc 621
            ||| ||||||||||||||||||||||||||
Sbjct: 1078 gaagatctgagcatccatgatgcacattcc 1049

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  133 bits (67), Expect = 8e-28
 Identities = 82/87 (94%)
 Strand = Plus / Plus

                                                                            
Query: 539      tcacagcagataagtttagtaattaatggatagaactctcttaggtgcttcttgaatatc 598
                ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 22581777 tcacagcagataagttttgtaattaatggatagaactctctgatgtgcttcttgaatatc 22581836

                                           
Query: 599      tgagcatccatgatgcacattccattc 625
                ||||| |||||||| ||||||||||||
Sbjct: 22581837 tgagcgtccatgatacacattccattc 22581863



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                            
Query: 470      actcagggcatgagtggagtaagttgtttgctgaaaagatcgccaagtgccccacgaaca 529
                ||||||||||||||||| |||||||||||||||||||| || ||||| || |||||||||
Sbjct: 22581623 actcagggcatgagtggggtaagttgtttgctgaaaaggtcaccaagggcaccacgaaca 22581682

                        
Query: 530      tccatctg 537
                ||||||||
Sbjct: 22581683 tccatctg 22581690

>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1112_E08
          Length = 119926

 Score =  133 bits (67), Expect = 8e-28
 Identities = 82/87 (94%)
 Strand = Plus / Plus

                                                                         
Query: 539   tcacagcagataagtttagtaattaatggatagaactctcttaggtgcttcttgaatatc 598
             ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 62159 tcacagcagataagttttgtaattaatggatagaactctctgatgtgcttcttgaatatc 62218

                                        
Query: 599   tgagcatccatgatgcacattccattc 625
             ||||| |||||||| ||||||||||||
Sbjct: 62219 tgagcgtccatgatacacattccattc 62245



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                         
Query: 470   actcagggcatgagtggagtaagttgtttgctgaaaagatcgccaagtgccccacgaaca 529
             ||||||||||||||||| |||||||||||||||||||| || ||||| || |||||||||
Sbjct: 62005 actcagggcatgagtggggtaagttgtttgctgaaaaggtcaccaagggcaccacgaaca 62064

                     
Query: 530   tccatctg 537
             ||||||||
Sbjct: 62065 tccatctg 62072

>gb|AC084220.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-43E4, complete
              sequence
          Length = 136062

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 94     tacacatataagcatataatg 114
              |||||||||||||||||||||
Sbjct: 124302 tacacatataagcatataatg 124322

>gb|AC087841.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-415I19, complete
             sequence
          Length = 198053

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 94    tacacatataagcatataatg 114
             |||||||||||||||||||||
Sbjct: 16221 tacacatataagcatataatg 16241

>emb|CR318632.9| Zebrafish DNA sequence from clone CH211-113N10 in linkage group 5,
            complete sequence
          Length = 143278

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 108  tataatgccatatccatcgtctcaa 132
            ||||||| |||||||||||||||||
Sbjct: 3420 tataatggcatatccatcgtctcaa 3396

>gb|AF312225.1|AF312225 Homo sapiens chromosome 2 map 2q37.1, complete sequence
          Length = 345102

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 128   ctcaactctacttgtgtatagaatg 152
             ||||||||||||||||| |||||||
Sbjct: 80682 ctcaactctacttgtgtttagaatg 80706

>gb|AC019130.6| Homo sapiens BAC clone RP11-563E16 from 2, complete sequence
          Length = 139049

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 128   ctcaactctacttgtgtatagaatg 152
             ||||||||||||||||| |||||||
Sbjct: 83798 ctcaactctacttgtgtttagaatg 83822

>emb|AL356800.4|CNS05TDI Human chromosome 14 DNA sequence BAC R-97N10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163152

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    atgtacacatataagcatata 111
             |||||||||||||||||||||
Sbjct: 33070 atgtacacatataagcatata 33050

>emb|AL844884.5| Mouse DNA sequence from clone RP23-266B14 on chromosome 2, complete
             sequence
          Length = 150285

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 87    accaatgtacacatataagcatata 111
             ||||| |||||||||||||||||||
Sbjct: 49342 accaaagtacacatataagcatata 49318

>gb|AC115795.11| Mus musculus chromosome 5, clone RP23-400O10, complete sequence
          Length = 207103

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    aggactcagggcatgagtgg 486
              ||||||||||||||||||||
Sbjct: 149307 aggactcagggcatgagtgg 149288

>ref|NM_001030684.1| Gallus gallus general transcription factor IIIC, polypeptide 5, 63kDa
            (GTF3C5), mRNA
          Length = 3579

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  atagaatgatagaatcatgg 164
            ||||||||||||||||||||
Sbjct: 3282 atagaatgatagaatcatgg 3263

>ref|XM_459482.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E04356g)
           partial mRNA
          Length = 1263

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 577 tcttaggtgcttcttgaata 596
           ||||||||||||||||||||
Sbjct: 541 tcttaggtgcttcttgaata 522

>gb|AC151805.20| Medicago truncatula clone mth2-59n17, complete sequence
          Length = 143937

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 128   ctcaactctacttgtgtatagaatgata 155
             ||||||| |||| |||||||||||||||
Sbjct: 32330 ctcaactatactggtgtatagaatgata 32357

>gb|AC170084.13| Medicago truncatula clone mth2-156k10, complete sequence
          Length = 143943

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 128    ctcaactctacttgtgtatagaatgata 155
              ||||||| |||| |||||||||||||||
Sbjct: 111613 ctcaactatactggtgtatagaatgata 111586

>gb|AC122541.3| Mus musculus BAC clone RP24-567D4 from chromosome 5, complete sequence
          Length = 166883

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      tttattaaatgcagactata 23
              ||||||||||||||||||||
Sbjct: 154665 tttattaaatgcagactata 154684

>gb|AC138679.10| Mus musculus chromosome 5, clone RP23-177I4, complete sequence
          Length = 230184

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      tttattaaatgcagactata 23
              ||||||||||||||||||||
Sbjct: 200367 tttattaaatgcagactata 200348

>emb|Z92542.2|HS245G19 Human DNA sequence from clone RP1-245G19 on chromosome Xp22.11-22.2
             Contains the 3' end of the CDKL5 gene for cyclin-dependent
             kinase-like 5, the 3' end of the RS1 gene for
             retinoschisis (X-linked, juvenile) 1, and a gap junction
             protein, alpha 2, 38kDa (connexin 38) (GJA2) pseudogene,
             complete sequence
          Length = 145538

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    aaatgcagactataaaagca 29
             ||||||||||||||||||||
Sbjct: 72216 aaatgcagactataaaagca 72197

>emb|AL450997.5| Human DNA sequence from clone RP5-1086I18 on chromosome 1 Contains part
             of the KCND3 gene for potassium voltage-gated channel
             Shal-related subfamily member 3 and a novel gene, complete
             sequence
          Length = 126692

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   atgctgcaacaagcaaagct 246
             ||||||||||||||||||||
Sbjct: 14518 atgctgcaacaagcaaagct 14537

>emb|AL137251.5| Human DNA sequence from clone RP1-141N5 on chromosome 6 Contains the 3'
              end of the gene for KIAA1913 protein, complete sequence
          Length = 122354

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    aaagctactttccaagatat 260
              ||||||||||||||||||||
Sbjct: 120589 aaagctactttccaagatat 120570

>emb|AL008729.1|HS257A7 Human DNA sequence from clone RP1-257A7 on chromosome 6p24 Contains the
             3' end of gene KIAA1733, a novel gene and the 3' end of a
             novel gene, complete sequence
          Length = 127917

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   ctcacatcatctacggaaac 285
             ||||||||||||||||||||
Sbjct: 31059 ctcacatcatctacggaaac 31078

>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
              hansenii
          Length = 2037969

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 577    tcttaggtgcttcttgaata 596
              ||||||||||||||||||||
Sbjct: 310408 tcttaggtgcttcttgaata 310389

>emb|AJ719580.1| Gallus gallus mRNA for hypothetical protein, clone 4a9
          Length = 3579

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  atagaatgatagaatcatgg 164
            ||||||||||||||||||||
Sbjct: 3282 atagaatgatagaatcatgg 3263

>gb|AC151459.30| Medicago truncatula clone mth2-6e6, complete sequence
          Length = 129518

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 128   ctcaactctacttgtgtatagaatgata 155
             ||||||| |||| |||||||||||||||
Sbjct: 10092 ctcaactatactggtgtatagaatgata 10065

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 588      tcttgaatatctgagcatccatga 611
                ||||||| ||||||||||||||||
Sbjct: 20784879 tcttgaaaatctgagcatccatga 20784902

>gb|AC018659.35| Homo sapiens 12 BAC RP11-528M18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 178145

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    atgtacacatataagcatat 110
             ||||||||||||||||||||
Sbjct: 25503 atgtacacatataagcatat 25484

>gb|AC131803.3| Mus musculus BAC clone RP24-549I15 from chromosome 5, complete
            sequence
          Length = 168439

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 4    tttattaaatgcagactata 23
            ||||||||||||||||||||
Sbjct: 8059 tttattaaatgcagactata 8078

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 588      tcttgaatatctgagcatccatga 611
                ||||||| ||||||||||||||||
Sbjct: 20711093 tcttgaaaatctgagcatccatga 20711116

>emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa0036E08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 149022

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 588   tcttgaatatctgagcatccatga 611
             ||||||| ||||||||||||||||
Sbjct: 82720 tcttgaaaatctgagcatccatga 82743

>emb|AL845434.11| Mouse DNA sequence from clone RP23-211O3 on chromosome 2, complete
             sequence
          Length = 131971

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 564   atggatagaactctcttagg 583
             ||||||||||||||||||||
Sbjct: 45570 atggatagaactctcttagg 45589

>emb|CT009582.3| Pan troglodytes chromosome X clone PTB-130G16 map Xq28, complete sequence
          Length = 195752

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     aaatgcagactataaaagca 29
              ||||||||||||||||||||
Sbjct: 165275 aaatgcagactataaaagca 165256

>gb|AC159813.2| Mus musculus BAC clone RP23-386L9 from chromosome 12, complete sequence
          Length = 213561

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   actttccaagatatctgtac 266
             ||||||||||||||||||||
Sbjct: 85705 actttccaagatatctgtac 85686


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,765,232
Number of Sequences: 3902068
Number of extensions: 5765232
Number of successful extensions: 107191
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106976
Number of HSP's gapped (non-prelim): 215
length of query: 625
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 602
effective length of database: 17,143,297,704
effective search space: 10320265217808
effective search space used: 10320265217808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)