ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SUC3_ARATH (O80605) Sucrose transport protein SUC3 (Sucrose perm... 121 2e-27
2SUC4_ARATH (Q9FE59) Sucrose transport protein SUC4 (Sucrose perm... 72 2e-12
3SUC1_ARATH (Q39232) Sucrose transport protein SUC1 (Sucrose perm... 70 5e-12
4SUC2_ARATH (Q39231) Sucrose transport protein SUC2 (Sucrose perm... 69 1e-11
5SUT_SPIOL (Q03411) Sucrose transport protein (Sucrose permease) ... 69 1e-11
6SUC9_ARATH (Q9FG00) Sucrose transport protein SUC9 (Sucrose perm... 64 3e-10
7SUC5_ARATH (Q9C8X2) Sucrose transport protein SUC5 (Sucrose perm... 61 3e-09
8SUC8_ARATH (Q9ZVK6) Sucrose transport protein SUC8 (Sucrose perm... 61 4e-09
9SUC6_ARATH (Q6A329) Probable sucrose transport protein SUC6 (Suc... 60 9e-09
10SUC7_ARATH (Q67YF8) Probable sucrose transport protein SUC7 (Suc... 58 2e-08
11GAGD2_HUMAN (Q9HD64) G antigen family D 2 protein (XAGE-1 protein) 32 2.5
12PPHLN_HUMAN (Q8NEY8) Periphilin-1 (Gastric cancer antigen Ga50) 31 4.3

>SUC3_ARATH (O80605) Sucrose transport protein SUC3 (Sucrose permease 3)|
           (Sucrose-proton symporter 3) (Sucrose transporter 2)
          Length = 594

 Score =  121 bits (303), Expect = 2e-27
 Identities = 61/153 (39%), Positives = 86/153 (56%)
 Frame = -2

Query: 711 IGARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXX 532
           +GAR+VWA+SNF VF CM  T ++S +S     + +++I+  ++T +T            
Sbjct: 442 MGARVVWALSNFTVFACMAGTAVISLMSLSDDKNGIEYIMRGNETTRTAAVIVFALLGFP 501

Query: 531 XSITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIPXX 352
            +ITYSVPFSV                  LNLAIV PQ++VSLGAGPWD LFGGGN+P  
Sbjct: 502 LAITYSVPFSVTAEVTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDQLFGGGNLPAF 561

Query: 351 XXXXXXXXXXXXXXVIKLPKLSNNYQSAGFHMG 253
                         + +LP LS++++S GFH+G
Sbjct: 562 VLASVAAFAAGVIALQRLPTLSSSFKSTGFHIG 594



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>SUC4_ARATH (Q9FE59) Sucrose transport protein SUC4 (Sucrose permease 4)|
           (Sucrose-proton symporter 4) (Sucrose transporter 4)
          Length = 510

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
 Frame = -2

Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADK---TVKTXXXXXXXXXX 538
           GA  VW ISN ++ +C L   I S+++  L        +G ++   ++            
Sbjct: 365 GAGFVWGISNILMAICFLGMIITSFVASHL------GYIGHEQPPASIVFAAVLIFTILG 418

Query: 537 XXXSITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358
              +ITYSVP+++                  LNLAIV PQ++VS+G+GPWD LFGGGN P
Sbjct: 419 IPLAITYSVPYALISIRIESLGLGQGLSLGVLNLAIVIPQVIVSVGSGPWDQLFGGGNSP 478

Query: 357 XXXXXXXXXXXXXXXXVIKLPK 292
                           ++ LP+
Sbjct: 479 ALAVGAATGFIGGIVAILALPR 500



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>SUC1_ARATH (Q39232) Sucrose transport protein SUC1 (Sucrose permease 1)|
           (Sucrose-proton symporter 1)
          Length = 513

 Score = 70.5 bits (171), Expect = 5e-12
 Identities = 39/117 (33%), Positives = 58/117 (49%)
 Frame = -2

Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXXX 529
           GA+ +W I NFI+   +  T +++  + D +      + G   +VK              
Sbjct: 361 GAKRLWGIVNFILAAGLAMTVLVTKFAED-HRKTAGDLAGPSASVKAGALSLFAVLGIPL 419

Query: 528 SITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358
           +IT+S PF++                  LNLAIV PQ++VSLG GP+D LFGGGN+P
Sbjct: 420 AITFSTPFALASIFSSCSGAGQGLSLGVLNLAIVIPQMIVSLGGGPFDALFGGGNLP 476



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>SUC2_ARATH (Q39231) Sucrose transport protein SUC2 (Sucrose permease 2)|
           (Sucrose-proton symporter 2) (Sucrose transporter 1)
          Length = 512

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 38/117 (32%), Positives = 57/117 (48%)
 Frame = -2

Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXXX 529
           GA+ +W I NFI+ +C+  T +++  + +          G    V               
Sbjct: 359 GAKRLWGIVNFILAICLAMTVVVTKQAENHRRDHGGAKTGPPGNVTAGALTLFAILGIPQ 418

Query: 528 SITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358
           +IT+S+PF++                  LNLAIV PQ+V+S+G GP+D LFGGGNIP
Sbjct: 419 AITFSIPFALASIFSTNSGAGQGLSLGVLNLAIVVPQMVISVGGGPFDELFGGGNIP 475



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>SUT_SPIOL (Q03411) Sucrose transport protein (Sucrose permease)|
           (Sucrose-proton symporter)
          Length = 525

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
 Frame = -2

Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGA------DKTVKTXXXXXXX 547
           GA+ +W I N I+ VC+  T +++  +     S   HI+G+         VK        
Sbjct: 369 GAKRLWGIVNIILAVCLAMTVLVTKSAEHFRDS--HHIMGSAVPPPPPAGVKGGALAIFA 426

Query: 546 XXXXXXSITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGG 367
                 +IT+S+PF++                  LNLAIV PQ+ VS+ +GPWD +FGGG
Sbjct: 427 VLGIPLAITFSIPFALASIFSASSGSGQGLSLGVLNLAIVVPQMFVSVTSGPWDAMFGGG 486

Query: 366 NIP 358
           N+P
Sbjct: 487 NLP 489



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>SUC9_ARATH (Q9FG00) Sucrose transport protein SUC9 (Sucrose permease 9)|
           (Sucrose-proton symporter 9)
          Length = 491

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 37/118 (31%), Positives = 55/118 (46%)
 Frame = -2

Query: 711 IGARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXX 532
           IGA+ +W   N I+ VC LA T+L     + +      +      ++             
Sbjct: 354 IGAKRLWGAVNIILAVC-LAMTVLVTKKAEEHRKIAGRMALPTNAIRDGALSLFAILGIP 412

Query: 531 XSITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358
            +IT+S+PF++                  LN+AIV PQ++VS G GP D LFGGGN+P
Sbjct: 413 LAITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLP 470



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>SUC5_ARATH (Q9C8X2) Sucrose transport protein SUC5 (Sucrose permease 5)|
           (Sucrose-proton symporter 5)
          Length = 512

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 36/117 (30%), Positives = 54/117 (46%)
 Frame = -2

Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXXX 529
           GA+ +W   NFI+ +  LA T+L   S + +      + G    +K              
Sbjct: 360 GAKRLWGCVNFILAIG-LAMTVLVTKSAEHHREIAGPLAGPSSGIKAGVFSLFTVLGIPL 418

Query: 528 SITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358
           +ITYS+PF++                  LN+AI  PQ++VS  +GP D  FGGGN+P
Sbjct: 419 AITYSIPFALASIFSTNSGAGQGLSLGVLNIAICIPQMIVSFSSGPLDAQFGGGNLP 475



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>SUC8_ARATH (Q9ZVK6) Sucrose transport protein SUC8 (Sucrose permease 8)|
           (Sucrose-proton symporter 8)
          Length = 492

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 36/117 (30%), Positives = 54/117 (46%)
 Frame = -2

Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXXX 529
           GA+ +W   N I+ VC LA T+L     + +      +      ++              
Sbjct: 356 GAKRLWGAVNIILAVC-LAMTVLVTKKAEEHRRIAGPMALPTDGIRAGALTLFALLGIPL 414

Query: 528 SITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358
           +IT+S+PF++                  LN+AIV PQ++VS G GP D LFGGGN+P
Sbjct: 415 AITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLP 471



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>SUC6_ARATH (Q6A329) Probable sucrose transport protein SUC6 (Sucrose permease|
           6) (Sucrose-proton symporter 6)
          Length = 492

 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 36/117 (30%), Positives = 53/117 (45%)
 Frame = -2

Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXXX 529
           GA+ +W   N I+ VC LA T+L     + +      +      ++              
Sbjct: 356 GAKRLWGAVNIILAVC-LAMTVLVTKKAEEHRRIAGPMALPTDGIRAGALTLFALLGIPL 414

Query: 528 SITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358
           +IT+S+PF++                  LN+ IV PQ+VVS G GP D LFGGGN+P
Sbjct: 415 AITFSIPFALASIISSSSGAGQGLSLGVLNMTIVIPQMVVSFGVGPIDALFGGGNLP 471



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>SUC7_ARATH (Q67YF8) Probable sucrose transport protein SUC7 (Sucrose permease|
           7) (Sucrose-proton symporter 7)
          Length = 491

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 35/117 (29%), Positives = 53/117 (45%)
 Frame = -2

Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXXX 529
           GA+ +W   N I+ VC LA T+L     + +      +      ++              
Sbjct: 355 GAKRLWGAVNIILAVC-LAMTVLVTKKAEEHRRIAGPMALPTDGIRAGALTLFALLGIPL 413

Query: 528 SITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358
           +IT+S+PF++                  LN+AIV PQ++VS G GP D LFG GN+P
Sbjct: 414 AITFSIPFALASIISSSSGAGQRLSLGVLNMAIVIPQMIVSFGVGPIDALFGDGNLP 470



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>GAGD2_HUMAN (Q9HD64) G antigen family D 2 protein (XAGE-1 protein)|
          Length = 160

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 19/56 (33%), Positives = 22/56 (39%)
 Frame = -3

Query: 395 AHGTCSSGEGTSRHSPWPRSSHWQPEFSR*SSYPSCRTTTNPPDSTWAENTEPRAG 228
           AHG        +R    PRS   Q +      YPS R+T NP    W   T P  G
Sbjct: 5   AHGPSCLVTAITREEGGPRSGGAQAKLGCCWGYPSPRSTWNPDRRFWTPQTGPGEG 60



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>PPHLN_HUMAN (Q8NEY8) Periphilin-1 (Gastric cancer antigen Ga50)|
          Length = 458

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
 Frame = -3

Query: 380 SSGEGTSRHSPWPRSSHW--QPEFSR*SSYPSCRTTTNPPDSTWAE-NTEPRAGSRLLCV 210
           + GE T++ +P P  +    QP   R       R TT  PD TW       +   R+L  
Sbjct: 367 NEGEETAQSAPQPPQAPQPLQPRKKRVRRTTQLRRTTGAPDITWGMLKKTTQEAERILLR 426

Query: 209 TSTDTQPEHN*TLIPILSFVYMGNDSFCQIHNK 111
           T T   PE+    + +LS V+  +    +  NK
Sbjct: 427 TQTPFTPEN--LFLAMLSVVHCNSRKDVKPENK 457


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,342,905
Number of Sequences: 219361
Number of extensions: 1787014
Number of successful extensions: 3989
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3979
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7196276819
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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