| Clone Name | rbags21b06 |
|---|---|
| Clone Library Name | barley_pub |
>SUC3_ARATH (O80605) Sucrose transport protein SUC3 (Sucrose permease 3)| (Sucrose-proton symporter 3) (Sucrose transporter 2) Length = 594 Score = 121 bits (303), Expect = 2e-27 Identities = 61/153 (39%), Positives = 86/153 (56%) Frame = -2 Query: 711 IGARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXX 532 +GAR+VWA+SNF VF CM T ++S +S + +++I+ ++T +T Sbjct: 442 MGARVVWALSNFTVFACMAGTAVISLMSLSDDKNGIEYIMRGNETTRTAAVIVFALLGFP 501 Query: 531 XSITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIPXX 352 +ITYSVPFSV LNLAIV PQ++VSLGAGPWD LFGGGN+P Sbjct: 502 LAITYSVPFSVTAEVTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDQLFGGGNLPAF 561 Query: 351 XXXXXXXXXXXXXXVIKLPKLSNNYQSAGFHMG 253 + +LP LS++++S GFH+G Sbjct: 562 VLASVAAFAAGVIALQRLPTLSSSFKSTGFHIG 594
>SUC4_ARATH (Q9FE59) Sucrose transport protein SUC4 (Sucrose permease 4)| (Sucrose-proton symporter 4) (Sucrose transporter 4) Length = 510 Score = 72.0 bits (175), Expect = 2e-12 Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 3/142 (2%) Frame = -2 Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADK---TVKTXXXXXXXXXX 538 GA VW ISN ++ +C L I S+++ L +G ++ ++ Sbjct: 365 GAGFVWGISNILMAICFLGMIITSFVASHL------GYIGHEQPPASIVFAAVLIFTILG 418 Query: 537 XXXSITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358 +ITYSVP+++ LNLAIV PQ++VS+G+GPWD LFGGGN P Sbjct: 419 IPLAITYSVPYALISIRIESLGLGQGLSLGVLNLAIVIPQVIVSVGSGPWDQLFGGGNSP 478 Query: 357 XXXXXXXXXXXXXXXXVIKLPK 292 ++ LP+ Sbjct: 479 ALAVGAATGFIGGIVAILALPR 500
>SUC1_ARATH (Q39232) Sucrose transport protein SUC1 (Sucrose permease 1)| (Sucrose-proton symporter 1) Length = 513 Score = 70.5 bits (171), Expect = 5e-12 Identities = 39/117 (33%), Positives = 58/117 (49%) Frame = -2 Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXXX 529 GA+ +W I NFI+ + T +++ + D + + G +VK Sbjct: 361 GAKRLWGIVNFILAAGLAMTVLVTKFAED-HRKTAGDLAGPSASVKAGALSLFAVLGIPL 419 Query: 528 SITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358 +IT+S PF++ LNLAIV PQ++VSLG GP+D LFGGGN+P Sbjct: 420 AITFSTPFALASIFSSCSGAGQGLSLGVLNLAIVIPQMIVSLGGGPFDALFGGGNLP 476
>SUC2_ARATH (Q39231) Sucrose transport protein SUC2 (Sucrose permease 2)| (Sucrose-proton symporter 2) (Sucrose transporter 1) Length = 512 Score = 69.3 bits (168), Expect = 1e-11 Identities = 38/117 (32%), Positives = 57/117 (48%) Frame = -2 Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXXX 529 GA+ +W I NFI+ +C+ T +++ + + G V Sbjct: 359 GAKRLWGIVNFILAICLAMTVVVTKQAENHRRDHGGAKTGPPGNVTAGALTLFAILGIPQ 418 Query: 528 SITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358 +IT+S+PF++ LNLAIV PQ+V+S+G GP+D LFGGGNIP Sbjct: 419 AITFSIPFALASIFSTNSGAGQGLSLGVLNLAIVVPQMVISVGGGPFDELFGGGNIP 475
>SUT_SPIOL (Q03411) Sucrose transport protein (Sucrose permease)| (Sucrose-proton symporter) Length = 525 Score = 68.9 bits (167), Expect = 1e-11 Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 6/123 (4%) Frame = -2 Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGA------DKTVKTXXXXXXX 547 GA+ +W I N I+ VC+ T +++ + S HI+G+ VK Sbjct: 369 GAKRLWGIVNIILAVCLAMTVLVTKSAEHFRDS--HHIMGSAVPPPPPAGVKGGALAIFA 426 Query: 546 XXXXXXSITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGG 367 +IT+S+PF++ LNLAIV PQ+ VS+ +GPWD +FGGG Sbjct: 427 VLGIPLAITFSIPFALASIFSASSGSGQGLSLGVLNLAIVVPQMFVSVTSGPWDAMFGGG 486 Query: 366 NIP 358 N+P Sbjct: 487 NLP 489
>SUC9_ARATH (Q9FG00) Sucrose transport protein SUC9 (Sucrose permease 9)| (Sucrose-proton symporter 9) Length = 491 Score = 64.3 bits (155), Expect = 3e-10 Identities = 37/118 (31%), Positives = 55/118 (46%) Frame = -2 Query: 711 IGARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXX 532 IGA+ +W N I+ VC LA T+L + + + ++ Sbjct: 354 IGAKRLWGAVNIILAVC-LAMTVLVTKKAEEHRKIAGRMALPTNAIRDGALSLFAILGIP 412 Query: 531 XSITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358 +IT+S+PF++ LN+AIV PQ++VS G GP D LFGGGN+P Sbjct: 413 LAITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLP 470
>SUC5_ARATH (Q9C8X2) Sucrose transport protein SUC5 (Sucrose permease 5)| (Sucrose-proton symporter 5) Length = 512 Score = 61.2 bits (147), Expect = 3e-09 Identities = 36/117 (30%), Positives = 54/117 (46%) Frame = -2 Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXXX 529 GA+ +W NFI+ + LA T+L S + + + G +K Sbjct: 360 GAKRLWGCVNFILAIG-LAMTVLVTKSAEHHREIAGPLAGPSSGIKAGVFSLFTVLGIPL 418 Query: 528 SITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358 +ITYS+PF++ LN+AI PQ++VS +GP D FGGGN+P Sbjct: 419 AITYSIPFALASIFSTNSGAGQGLSLGVLNIAICIPQMIVSFSSGPLDAQFGGGNLP 475
>SUC8_ARATH (Q9ZVK6) Sucrose transport protein SUC8 (Sucrose permease 8)| (Sucrose-proton symporter 8) Length = 492 Score = 60.8 bits (146), Expect = 4e-09 Identities = 36/117 (30%), Positives = 54/117 (46%) Frame = -2 Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXXX 529 GA+ +W N I+ VC LA T+L + + + ++ Sbjct: 356 GAKRLWGAVNIILAVC-LAMTVLVTKKAEEHRRIAGPMALPTDGIRAGALTLFALLGIPL 414 Query: 528 SITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358 +IT+S+PF++ LN+AIV PQ++VS G GP D LFGGGN+P Sbjct: 415 AITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLP 471
>SUC6_ARATH (Q6A329) Probable sucrose transport protein SUC6 (Sucrose permease| 6) (Sucrose-proton symporter 6) Length = 492 Score = 59.7 bits (143), Expect = 9e-09 Identities = 36/117 (30%), Positives = 53/117 (45%) Frame = -2 Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXXX 529 GA+ +W N I+ VC LA T+L + + + ++ Sbjct: 356 GAKRLWGAVNIILAVC-LAMTVLVTKKAEEHRRIAGPMALPTDGIRAGALTLFALLGIPL 414 Query: 528 SITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358 +IT+S+PF++ LN+ IV PQ+VVS G GP D LFGGGN+P Sbjct: 415 AITFSIPFALASIISSSSGAGQGLSLGVLNMTIVIPQMVVSFGVGPIDALFGGGNLP 471
>SUC7_ARATH (Q67YF8) Probable sucrose transport protein SUC7 (Sucrose permease| 7) (Sucrose-proton symporter 7) Length = 491 Score = 58.2 bits (139), Expect = 2e-08 Identities = 35/117 (29%), Positives = 53/117 (45%) Frame = -2 Query: 708 GARLVWAISNFIVFVCMLATTILSWISYDLYSSKLQHIVGADKTVKTXXXXXXXXXXXXX 529 GA+ +W N I+ VC LA T+L + + + ++ Sbjct: 355 GAKRLWGAVNIILAVC-LAMTVLVTKKAEEHRRIAGPMALPTDGIRAGALTLFALLGIPL 413 Query: 528 SITYSVPFSVXXXXXXXXXXXXXXXXXXLNLAIVAPQIVVSLGAGPWDLLFGGGNIP 358 +IT+S+PF++ LN+AIV PQ++VS G GP D LFG GN+P Sbjct: 414 AITFSIPFALASIISSSSGAGQRLSLGVLNMAIVIPQMIVSFGVGPIDALFGDGNLP 470
>GAGD2_HUMAN (Q9HD64) G antigen family D 2 protein (XAGE-1 protein)| Length = 160 Score = 31.6 bits (70), Expect = 2.5 Identities = 19/56 (33%), Positives = 22/56 (39%) Frame = -3 Query: 395 AHGTCSSGEGTSRHSPWPRSSHWQPEFSR*SSYPSCRTTTNPPDSTWAENTEPRAG 228 AHG +R PRS Q + YPS R+T NP W T P G Sbjct: 5 AHGPSCLVTAITREEGGPRSGGAQAKLGCCWGYPSPRSTWNPDRRFWTPQTGPGEG 60
>PPHLN_HUMAN (Q8NEY8) Periphilin-1 (Gastric cancer antigen Ga50)| Length = 458 Score = 30.8 bits (68), Expect = 4.3 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Frame = -3 Query: 380 SSGEGTSRHSPWPRSSHW--QPEFSR*SSYPSCRTTTNPPDSTWAE-NTEPRAGSRLLCV 210 + GE T++ +P P + QP R R TT PD TW + R+L Sbjct: 367 NEGEETAQSAPQPPQAPQPLQPRKKRVRRTTQLRRTTGAPDITWGMLKKTTQEAERILLR 426 Query: 209 TSTDTQPEHN*TLIPILSFVYMGNDSFCQIHNK 111 T T PE+ + +LS V+ + + NK Sbjct: 427 TQTPFTPEN--LFLAMLSVVHCNSRKDVKPENK 457 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,342,905 Number of Sequences: 219361 Number of extensions: 1787014 Number of successful extensions: 3989 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3845 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3979 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7196276819 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)