| Clone Name | rbags20l22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z23038.1|TAACCASEA T.aestivum ACCase mRNA, 3' CDS Length = 1854 Score = 737 bits (372), Expect = 0.0 Identities = 472/500 (94%), Gaps = 4/500 (0%) Strand = Plus / Minus Query: 131 tccaactacacttatcaaccattcggagaag-ccaaaagcaggttgttcctcgaataatg 189 |||||||||||| ||||||||||||||| | || ||| || ||| | |||||||||| Sbjct: 1848 tccaactacactcatcaaccattcggagccgtccgaaaacaagttttgcctcgaataaca 1789 Query: 190 ggagaagactgcaaacaagttttacaaaacaatggttgactcagatcagctatggtcggt 249 | ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1788 g-agaagaccgcaaaaaagttttacaaaataatggttgactcagatcagctatggtcggt 1730 Query: 250 tacagccgaatagtatcccttctatatatgtacttcaagagaaaccgatatcatgcacat 309 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1729 tacagccgaatagtatcc-ttctatatatgtacttcaagagaaaccgatatcatgcacat 1671 Query: 310 tctgcattggatgcgttggtatcatctgatcatttaaggaccttcttgacttcctcaaca 369 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1670 tctgaattggatgcgttggtatcatctgatcatttaaggactttcttgacttcctcaaca 1611 Query: 370 aactgtgctctccttgagggatccatcttctctagtagcatagaaagaccctgtggcaag 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1610 aactgtgctctccttgagggatccatcttctctagtagcatagaaagaccctgtggcaag 1551 Query: 430 gcctgtagatctggactggagtctgcaacatctgagagcaactgagataccctttgagcc 489 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1550 gcttctagatctggactggagtctgcaacatctgagagcaactgagataccctttgagcc 1491 Query: 490 ctgagttctttgatatactcctggtagttttcagggttttccctccaggcaacaaaagca 549 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1490 ctaagttctttgatatactcctggtagttttcagggttttccctccaggcaacaaaagca 1431 Query: 550 tcatcatcatcccatttcggtgcttcctgtttcagcctccttagaagccaagtaccattt 609 || ||||||||||| ||| |||||| ||| |||||| |||||||||||||||||||||| Sbjct: 1430 tcgtcatcatccca-ttcagtgcttgctgcttcagctcccttagaagccaagtaccattt 1372 Query: 610 ctggatcagctcgattgctg 629 |||||||||||||||||||| Sbjct: 1371 ctggatcagctcgattgctg 1352
>gb|AF029895.1| Triticum aestivum acetyl-coenzyme A carboxylase mRNA, complete cds, nuclear gene encoding plastid protein Length = 6993 Score = 509 bits (257), Expect = e-141 Identities = 291/301 (96%), Gaps = 1/301 (0%) Strand = Plus / Minus Query: 327 ggtatcatctgatcatttaaggaccttcttgacttcctcaacaaactgtgctctccttga 386 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6986 ggtatcatctgatcatttaaggactttcttgacttcctcaacaaactgtgctctccttga 6927 Query: 387 gggatccatcttctctagtagcatagaaagaccctgtggcaaggcctgtagatctggact 446 ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||| Sbjct: 6926 gggatccatcttctctaatagcatagaaagaccctgtggcaaggcttctagatctggact 6867 Query: 447 ggagtctgcaacatctgagagcaactgagataccctttgagccctgagttctttgatata 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6866 ggagtctgcaacatctgagagcaactgagataccctttgagccctgagttctttgatata 6807 Query: 507 ctcctggtagttttcagggttttccctccaggcaacaaaagcatcatcatcatcccattt 566 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 6806 ctcctggtagttttcagggttttccctccaggcaacaaaagcatcgtcatcatccca-tt 6748 Query: 567 cggtgcttcctgtttcagcctccttagaagccaagtaccatttctggatcagctcgattg 626 | ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 6747 cagtgcttcctgtttcagctcccttagaggccaagtaccatttctggatcagctcgattg 6688 Query: 627 c 627 | Sbjct: 6687 c 6687
>emb|AJ310767.1|AMY310767 Alopecurus myosuroides mRNA for acetyl-coenzyme A carboxylase Length = 7589 Score = 404 bits (204), Expect = e-109 Identities = 322/360 (89%), Gaps = 1/360 (0%) Strand = Plus / Minus Query: 270 tctatatatgtacttcaagagaaaccgatatcatgcacattctgcattggatgcgttggt 329 ||||||||||||||||||||||||| |||||||||||||| ||| |||||||| |||||| Sbjct: 7188 tctatatatgtacttcaagagaaacagatatcatgcacatactgtattggatgtgttggt 7129 Query: 330 atcatctgatcatttaaggaccttcttgacttcctcaacaaactgtgctctccttgaggg 389 ||||| ||||||||| ||||||||| |||| ||||| | ||||||||||||| | ||||| Sbjct: 7128 atcatttgatcatttcaggaccttcatgacctcctcgataaactgtgctctcttagaggg 7069 Query: 390 atccatcttctctagtagcatagaaagaccctgtggcaaggcctgtagatctggactgga 449 ||||||||| ||||||||||| ||||||||||| |||||||| |||| ||| | |||||| Sbjct: 7068 atccatcttatctagtagcatggaaagaccctgcggcaaggcttgtaaatccgaactgga 7009 Query: 450 gtctgcaacatctgagagcaactgagataccctttgagccctgagttctttgatatactc 509 | |||||||||||||||||||| ||||||||||||||||||| || |||||||||||||| Sbjct: 7008 gcctgcaacatctgagagcaaccgagataccctttgagccctaagctctttgatatactc 6949 Query: 510 ctggtagttttcagggttttccctccaggcaacaaaagcatcatcatcatcccatttcgg 569 || |||||||||||||| ||||||||||| ||||||||||| || |||||||| |||| Sbjct: 6948 cttatagttttcagggttctccctccaggcgacaaaagcatcgtcgtcatccca-gtcgg 6890 Query: 570 tgcttcctgtttcagcctccttagaagccaagtaccatttctggatcagctcgattgctg 629 ||||||||| | |||| ||| |||||||||||||||||||| |||||||||||| |||| Sbjct: 6889 tgcttcctgctgcagctgcctcagaagccaagtaccatttcttgatcagctcgatcgctg 6830
>gb|AY196481.1| Phalaris minor biotype Mazkeret-Batya acetyl CoA carboxylase gene, partial cds; nuclear gene for plastid product Length = 2027 Score = 347 bits (175), Expect = 3e-92 Identities = 269/299 (89%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 331 tcatctgatcatttaaggaccttcttgacttcctcaacaaactgtgctctccttgaggga 390 |||| ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 2027 tcatttgatcatttgaggaccttcttgacttcctcaataaactgtgctctcctagaggga 1968 Query: 391 tccatcttctctagtagcatagaaagaccctgtggcaaggcctgtagatctggactggag 450 |||||||| ||||||||||| ||||||||||| |||||||| |||| ||| | ||| ||| Sbjct: 1967 tccatcttatctagtagcatggaaagaccctgcggcaaggcttgtaaatccgaactagag 1908 Query: 451 tctgcaacatctgagagcaactgagataccctttgagccctgagttctttgatatactcc 510 |||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 1907 tctgcaacatctgacagcaactgagataccctttgagctctaagttctttgatatactcc 1848 Query: 511 tggtagttttcagggttttccctccaggcaacaaaagcatcatcatcatcccatttcggt 570 | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || Sbjct: 1847 ttatagttttcagggttttccctccaggcaacaaaagcatcgtcatcatccca-ttcagt 1789 Query: 571 gcttcctgtttcagcctccttagaagccaagtaccatttctggatcagctcgattgctg 629 ||| || | |||||| ||| ||||| |||||||||||||| ||||| ||| ||||||| Sbjct: 1788 gctcccagcttcagcagcctcagaagtcaagtaccatttcttgatcaactcaattgctg 1730
>gb|AY196480.1| Phalaris minor biotype Gilat acetyl CoA carboxylase gene, partial cds; nuclear gene for plastid product Length = 2027 Score = 347 bits (175), Expect = 3e-92 Identities = 269/299 (89%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 331 tcatctgatcatttaaggaccttcttgacttcctcaacaaactgtgctctccttgaggga 390 |||| ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 2027 tcatttgatcatttgaggaccttcttgacttcctcaataaactgtgctctcctagaggga 1968 Query: 391 tccatcttctctagtagcatagaaagaccctgtggcaaggcctgtagatctggactggag 450 |||||||| ||||||||||| ||||||||||| |||||||| |||| ||| | ||| ||| Sbjct: 1967 tccatcttatctagtagcatggaaagaccctgcggcaaggcttgtaaatccgaactagag 1908 Query: 451 tctgcaacatctgagagcaactgagataccctttgagccctgagttctttgatatactcc 510 |||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 1907 tctgcaacatctgacagcaactgagataccctttgagctctaagttctttgatatactcc 1848 Query: 511 tggtagttttcagggttttccctccaggcaacaaaagcatcatcatcatcccatttcggt 570 | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || Sbjct: 1847 ttatagttttcagggttttccctccaggcaacaaaagcatcgtcatcatccca-ttcagt 1789 Query: 571 gcttcctgtttcagcctccttagaagccaagtaccatttctggatcagctcgattgctg 629 ||| || | |||||| ||| ||||| |||||||||||||| ||||| ||| ||||||| Sbjct: 1788 gctcccagcttcagcagcctcagaagtcaagtaccatttcttgatcaactcaattgctg 1730
>gb|AY312174.1| Zea mays Zong31 acetyl-coenzyme A carboxylase ACC2B (acc2b) mRNA, partial cds; nuclear gene for plastid product Length = 1981 Score = 176 bits (89), Expect = 6e-41 Identities = 209/249 (83%) Strand = Plus / Minus Query: 316 ttggatgcgttggtatcatctgatcatttaaggaccttcttgacttcctcaacaaactgt 375 ||||||| ||||||||||| | ||||| ||| |||||||||||||||| |||||||| Sbjct: 1776 ttggatgtgttggtatcatatcatcatccaagaaccttcttgacttcctgaacaaacttc 1717 Query: 376 gctctccttgagggatccatcttctctagtagcatagaaagaccctgtggcaaggcctgt 435 ||||| || ||||||||||| |||| ||| ||||||||||||| | || || ||| Sbjct: 1716 actctctgagaaggatccatcttatctaatagtgtagaaagaccctgcgagaatgcttgt 1657 Query: 436 agatctggactggagtctgcaacatctgagagcaactgagataccctttgagccctgagt 495 ||||||| ||||||||| |||| ||| |||||| |||||||||| |||||||||| || Sbjct: 1656 agatctgaactggagtcagcaagatcagagagcgactgagatactttttgagcccttagc 1597 Query: 496 tctttgatatactcctggtagttttcagggttttccctccaggcaacaaaagcatcatca 555 |||| |||||| ||| |||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 1596 tcttggatatatcccttgtagttttcaggactgtccttccaggcaacaaaagcatcatca 1537 Query: 556 tcatcccat 564 ||||||||| Sbjct: 1536 tcatcccat 1528
>gb|AY312173.1| Zea mays Zong31 acetyl-coenzyme A carboxylase ACC2A (acc2a) mRNA, partial cds; nuclear gene for plastid product Length = 1981 Score = 176 bits (89), Expect = 6e-41 Identities = 209/249 (83%) Strand = Plus / Minus Query: 316 ttggatgcgttggtatcatctgatcatttaaggaccttcttgacttcctcaacaaactgt 375 ||||||| ||||||||||| | ||||| ||| |||||||||||||||| |||||||| Sbjct: 1776 ttggatgtgttggtatcatatcatcatccaagaaccttcttgacttcctgaacaaacttc 1717 Query: 376 gctctccttgagggatccatcttctctagtagcatagaaagaccctgtggcaaggcctgt 435 ||||| || ||||||||||| |||| ||| ||||||||||||| | || || ||| Sbjct: 1716 actctctgagaaggatccatcttatctaatagtgtagaaagaccctgcgagaatgcttgt 1657 Query: 436 agatctggactggagtctgcaacatctgagagcaactgagataccctttgagccctgagt 495 ||||||| ||||||||| |||| ||| |||||| |||||||||| |||||||||| || Sbjct: 1656 agatctgaactggagtcagcaagatcagagagcgactgagatactttttgagcccttagc 1597 Query: 496 tctttgatatactcctggtagttttcagggttttccctccaggcaacaaaagcatcatca 555 |||| |||||| ||| |||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 1596 tcttggatatatcccttgtagttttcaggactgtccttccaggcaacaaaagcatcatca 1537 Query: 556 tcatcccat 564 ||||||||| Sbjct: 1536 tcatcccat 1528
>gb|U58598.1|ZMU58598 Zea mays acetyl CoA carboxylase mRNA, partial cds Length = 5442 Score = 176 bits (89), Expect = 6e-41 Identities = 209/249 (83%) Strand = Plus / Minus Query: 316 ttggatgcgttggtatcatctgatcatttaaggaccttcttgacttcctcaacaaactgt 375 ||||||| ||||||||||| | ||||| ||| |||||||||||||||| |||||||| Sbjct: 5081 ttggatgtgttggtatcatatcatcatccaagaaccttcttgacttcctgaacaaacttc 5022 Query: 376 gctctccttgagggatccatcttctctagtagcatagaaagaccctgtggcaaggcctgt 435 ||||| || ||||||||||| |||| ||| ||||||||||||| | || || ||| Sbjct: 5021 actctctgagaaggatccatcttatctaatagtgtagaaagaccctgcgagaatgcttgt 4962 Query: 436 agatctggactggagtctgcaacatctgagagcaactgagataccctttgagccctgagt 495 ||||||| ||||||||| |||| ||| |||||| |||||||||| |||||||||| || Sbjct: 4961 agatctgaactggagtcagcaagatcagagagcgactgagatactttttgagcccttagc 4902 Query: 496 tctttgatatactcctggtagttttcagggttttccctccaggcaacaaaagcatcatca 555 |||| |||||| ||| |||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 4901 tcttggatatatcccttgtagttttcaggactgtccttccaggcaacaaaagcatcatca 4842 Query: 556 tcatcccat 564 ||||||||| Sbjct: 4841 tcatcccat 4833
>gb|AF294805.1|AF294805 Setaria italica acetyl-coenzyme A carboxylase (Acc-1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 7630 Score = 157 bits (79), Expect = 5e-35 Identities = 197/235 (83%), Gaps = 1/235 (0%) Strand = Plus / Minus Query: 346 aggaccttcttgacttcctcaacaaactgtgctctccttgagggatccatcttctctagt 405 ||||||||||||||||||| || |||| |||||| |||||||||||||| |||| | Sbjct: 7201 aggaccttcttgacttcctgaatgaacttggctctctgagagggatccatcttatctaat 7142 Query: 406 agcatagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaacatctgag 465 | | ||||||||||||| || || | |||||||| |||||||||||||| ||| ||| Sbjct: 7141 aatgtggaaagaccctgtgagaatgcttctagatctgaactggagtctgcaagatcggag 7082 Query: 466 agcaactgagataccctttgagccctgagttctttgatatactcctggtagttttcaggg 525 ||| ||||||| ||| |||||||||| | |||| |||||| ||| ||||||||||| Sbjct: 7081 agcgactgagacaccttttgagcccttaactcttggatatatcccttatagttttcagga 7022 Query: 526 ttttccctccaggcaacaaaagcatcatcatcatcccatttcggtgcttcctgtt 580 || ||| ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 7021 ttctccttccaggcaacaaaagcatcatcatcatccca-ttcagtgcttcctgtt 6968
>gb|AY219174.1| Setaria italica Sda 11 acetyl-coenzyme A carboxylase (ACC-S) mRNA, complete cds; nuclear gene for plastid product Length = 7271 Score = 157 bits (79), Expect = 5e-35 Identities = 197/235 (83%), Gaps = 1/235 (0%) Strand = Plus / Minus Query: 346 aggaccttcttgacttcctcaacaaactgtgctctccttgagggatccatcttctctagt 405 ||||||||||||||||||| || |||| |||||| |||||||||||||| |||| | Sbjct: 6985 aggaccttcttgacttcctgaatgaacttggctctctgagagggatccatcttatctaat 6926 Query: 406 agcatagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaacatctgag 465 | | ||||||||||||| || || | |||||||| |||||||||||||| ||| ||| Sbjct: 6925 aatgtggaaagaccctgtgagaatgcttctagatctgaactggagtctgcaagatcggag 6866 Query: 466 agcaactgagataccctttgagccctgagttctttgatatactcctggtagttttcaggg 525 ||| ||||||| ||| |||||||||| | |||| |||||| ||| ||||||||||| Sbjct: 6865 agcgactgagacaccttttgagcccttaactcttggatatatcccttatagttttcagga 6806 Query: 526 ttttccctccaggcaacaaaagcatcatcatcatcccatttcggtgcttcctgtt 580 || ||| ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 6805 ttctccttccaggcaacaaaagcatcatcatcatccca-ttcagtgcttcctgtt 6752
>gb|AY219175.1| Setaria italica Chum BC 6-1 acetyl-coenzyme A carboxylase (ACC-R) mRNA, complete cds; nuclear gene for plastid product Length = 7446 Score = 157 bits (79), Expect = 5e-35 Identities = 197/235 (83%), Gaps = 1/235 (0%) Strand = Plus / Minus Query: 346 aggaccttcttgacttcctcaacaaactgtgctctccttgagggatccatcttctctagt 405 ||||||||||||||||||| || |||| |||||| |||||||||||||| |||| | Sbjct: 7017 aggaccttcttgacttcctgaatgaacttggctctctgagagggatccatcttatctaat 6958 Query: 406 agcatagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaacatctgag 465 | | ||||||||||||| || || | |||||||| |||||||||||||| ||| ||| Sbjct: 6957 aatgtggaaagaccctgtgagaatgcttctagatctgaactggagtctgcaagatcggag 6898 Query: 466 agcaactgagataccctttgagccctgagttctttgatatactcctggtagttttcaggg 525 ||| ||||||| ||| |||||||||| | |||| |||||| ||| ||||||||||| Sbjct: 6897 agcgactgagacaccttttgagcccttaactcttggatatatcccttatagttttcagga 6838 Query: 526 ttttccctccaggcaacaaaagcatcatcatcatcccatttcggtgcttcctgtt 580 || ||| ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 6837 ttctccttccaggcaacaaaagcatcatcatcatccca-ttcagtgcttcctgtt 6784
>gb|AF231337.1| Avena fatua clone p33-43f acetyl-CoA carboxylase (ACC1) gene, ACC1;2 allele, partial cds Length = 2039 Score = 155 bits (78), Expect = 2e-34 Identities = 139/158 (87%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 472 tgagataccctttgagccctgagttctttgatatactcctggtagttttcagggttttcc 531 |||||||||||||||||||| || |||||||||| ||||| |||||||||||||| ||| Sbjct: 2039 tgagataccctttgagccctaagctctttgatatgctcctcatagttttcagggttctcc 1980 Query: 532 ctccaggcaacaaaagcatcatcatcatcccatttcggtgcttcctgtttcagcctcctt 591 |||||||| ||||||||||| ||||||||||| || |||||||||| |||||| ||| Sbjct: 1979 ctccaggcgacaaaagcatcgtcatcatccca-gtcagtgcttcctgcttcagctgcctc 1921 Query: 592 agaagccaagtaccatttctggatcagctcgattgctg 629 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1920 agaagccatgtaccatttcttgatcaactcgactgctg 1883
>gb|AF231336.1| Avena fatua clone p6-35f acetyl-CoA carboxylase (ACC1) gene, ACC1;2 allele, partial cds Length = 2039 Score = 155 bits (78), Expect = 2e-34 Identities = 139/158 (87%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 472 tgagataccctttgagccctgagttctttgatatactcctggtagttttcagggttttcc 531 |||||||||||||||||||| || |||||||||| ||||| |||||||||||||| ||| Sbjct: 2039 tgagataccctttgagccctaagctctttgatatgctcctcatagttttcagggttctcc 1980 Query: 532 ctccaggcaacaaaagcatcatcatcatcccatttcggtgcttcctgtttcagcctcctt 591 |||||||| ||||||||||| ||||||||||| || |||||||||| |||||| ||| Sbjct: 1979 ctccaggcgacaaaagcatcgtcatcatccca-gtcagtgcttcctgcttcagctgcctc 1921 Query: 592 agaagccaagtaccatttctggatcagctcgattgctg 629 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1920 agaagccatgtaccatttcttgatcaactcgactgctg 1883
>gb|AF231335.1| Avena fatua clone p6-34f acetyl-CoA carboxylase (ACC1) gene, ACC1;1-1 allele, partial cds Length = 2039 Score = 155 bits (78), Expect = 2e-34 Identities = 139/158 (87%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 472 tgagataccctttgagccctgagttctttgatatactcctggtagttttcagggttttcc 531 |||||||||||||||||||| || |||||||||| ||||| |||||||||||||| ||| Sbjct: 2039 tgagataccctttgagccctaagctctttgatatgctcctcatagttttcagggttctcc 1980 Query: 532 ctccaggcaacaaaagcatcatcatcatcccatttcggtgcttcctgtttcagcctcctt 591 |||||||| ||||||||||| ||||||||||| || |||||||||| |||||| ||| Sbjct: 1979 ctccaggcgacaaaagcatcgtcatcatccca-gtcagtgcttcctgcttcagctgcctc 1921 Query: 592 agaagccaagtaccatttctggatcagctcgattgctg 629 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1920 agaagccatgtaccatttcttgatcaactcgactgctg 1883
>gb|AF231334.1| Avena fatua clone p33-48f acetyl-CoA carboxylase (ACC1) gene, ACC1;1-2 allele, partial cds Length = 2039 Score = 155 bits (78), Expect = 2e-34 Identities = 139/158 (87%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 472 tgagataccctttgagccctgagttctttgatatactcctggtagttttcagggttttcc 531 |||||||||||||||||||| || |||||||||| ||||| |||||||||||||| ||| Sbjct: 2039 tgagataccctttgagccctaagctctttgatatgctcctcatagttttcagggttctcc 1980 Query: 532 ctccaggcaacaaaagcatcatcatcatcccatttcggtgcttcctgtttcagcctcctt 591 |||||||| ||||||||||| ||||||||||| || |||||||||| |||||| ||| Sbjct: 1979 ctccaggcgacaaaagcatcgtcatcatccca-gtcagtgcttcctgcttcagctgcctc 1921 Query: 592 agaagccaagtaccatttctggatcagctcgattgctg 629 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1920 agaagccatgtaccatttcttgatcaactcgactgctg 1883
>gb|AY312172.1| Zea mays Zong31 acetyl-coenzyme A carboxylase ACC1B (acc1b) mRNA, complete cds; nuclear gene for plastid product Length = 7327 Score = 151 bits (76), Expect = 3e-33 Identities = 184/220 (83%) Strand = Plus / Minus Query: 345 aaggaccttcttgacttcctcaacaaactgtgctctccttgagggatccatcttctctag 404 |||||||||||||||||||| |||||||| |||||| |||||||||||||| |||| Sbjct: 6979 aaggaccttcttgacttcctgaacaaacttcgctctctgagagggatccatcttatctaa 6920 Query: 405 tagcatagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaacatctga 464 |||| ||||||||||||| | || || || ||||||| ||||||||| |||| ||| || Sbjct: 6919 tagcgtagaaagaccctgcgagaatgcttgcagatctgaactggagtcagcaagatcaga 6860 Query: 465 gagcaactgagataccctttgagccctgagttctttgatatactcctggtagttttcagg 524 |||| | ||||| || |||||||||| || | || ||||| | ||| |||||||||||| Sbjct: 6859 gagcgaatgagacactttttgagccctaagcttttggatatgccccttgtagttttcagg 6800 Query: 525 gttttccctccaggcaacaaaagcatcatcatcatcccat 564 | ||| |||||||||||||||||||||| ||||||||| Sbjct: 6799 actgtccttccaggcaacaaaagcatcatcgtcatcccat 6760
>gb|AY312171.1| Zea mays Zong31 acetyl-coenzyme A carboxylase ACC1A (acc1a) mRNA, complete cds; nuclear gene for plastid product Length = 7324 Score = 151 bits (76), Expect = 3e-33 Identities = 184/220 (83%) Strand = Plus / Minus Query: 345 aaggaccttcttgacttcctcaacaaactgtgctctccttgagggatccatcttctctag 404 |||||||||||||||||||| |||||||| |||||| |||||||||||||| |||| Sbjct: 6976 aaggaccttcttgacttcctgaacaaacttcgctctctgagagggatccatcttatctaa 6917 Query: 405 tagcatagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaacatctga 464 |||| ||||||||||||| | || || || ||||||| ||||||||| |||| ||| || Sbjct: 6916 tagcgtagaaagaccctgcgagaatgcttgcagatctgaactggagtcagcaagatcaga 6857 Query: 465 gagcaactgagataccctttgagccctgagttctttgatatactcctggtagttttcagg 524 |||| | ||||| || |||||||||| || | || ||||| | ||| |||||||||||| Sbjct: 6856 gagcgaatgagacactttttgagccctaagcttttggatatgccccttgtagttttcagg 6797 Query: 525 gttttccctccaggcaacaaaagcatcatcatcatcccat 564 | ||| |||||||||||||||||||||| ||||||||| Sbjct: 6796 actgtccttccaggcaacaaaagcatcatcgtcatcccat 6757
>emb|Z24449.1|ZMACOAC Z.mays mRNA for acetyl CoA carboxylase (partial) Length = 5280 Score = 151 bits (76), Expect = 3e-33 Identities = 184/220 (83%) Strand = Plus / Minus Query: 345 aaggaccttcttgacttcctcaacaaactgtgctctccttgagggatccatcttctctag 404 |||||||||||||||||||| |||||||| |||||| |||||||||||||| |||| Sbjct: 4873 aaggaccttcttgacttcctgaacaaacttcgctctctgagagggatccatcttatctaa 4814 Query: 405 tagcatagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaacatctga 464 |||| ||||||||||||| | || || || ||||||| ||||||||| |||| ||| || Sbjct: 4813 tagcgtagaaagaccctgcgagaatgcttgcagatctgaactggagtcagcaagatcaga 4754 Query: 465 gagcaactgagataccctttgagccctgagttctttgatatactcctggtagttttcagg 524 |||| | ||||| || |||||||||| || | || ||||| | ||| |||||||||||| Sbjct: 4753 gagcgaatgagacactttttgagccctaagcttttggatatgccccttgtagttttcagg 4694 Query: 525 gttttccctccaggcaacaaaagcatcatcatcatcccat 564 | ||| |||||||||||||||||||||| ||||||||| Sbjct: 4693 actgtccttccaggcaacaaaagcatcatcgtcatcccat 4654
>gb|U19183.1|ZMU19183 Zea mays acetyl-coenzyme A carboxylase mRNA, complete cds Length = 7464 Score = 151 bits (76), Expect = 3e-33 Identities = 184/220 (83%) Strand = Plus / Minus Query: 345 aaggaccttcttgacttcctcaacaaactgtgctctccttgagggatccatcttctctag 404 |||||||||||||||||||| |||||||| |||||| |||||||||||||| |||| Sbjct: 7008 aaggaccttcttgacttcctgaacaaacttcgctctctgagagggatccatcttatctaa 6949 Query: 405 tagcatagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaacatctga 464 |||| ||||||||||||| | || || || ||||||| ||||||||| |||| ||| || Sbjct: 6948 tagcgtagaaagaccctgcgagaatgcttgcagatctgaactggagtcagcaagatcaga 6889 Query: 465 gagcaactgagataccctttgagccctgagttctttgatatactcctggtagttttcagg 524 |||| | ||||| || |||||||||| || | || ||||| | ||| |||||||||||| Sbjct: 6888 gagcgaatgagacactttttgagccctaagcttttggatatgccccttgtagttttcagg 6829 Query: 525 gttttccctccaggcaacaaaagcatcatcatcatcccat 564 | ||| |||||||||||||||||||||| ||||||||| Sbjct: 6828 actgtccttccaggcaacaaaagcatcatcgtcatcccat 6789
>gb|BT016315.1| Zea mays clone Contig148 mRNA sequence Length = 944 Score = 143 bits (72), Expect = 8e-31 Identities = 183/220 (83%) Strand = Plus / Minus Query: 345 aaggaccttcttgacttcctcaacaaactgtgctctccttgagggatccatcttctctag 404 |||||||||||||||||||| |||||||| |||||| |||||||||||||| |||| Sbjct: 470 aaggaccttcttgacttcctgaacaaacttcgctctctgagagggatccatcttatctaa 411 Query: 405 tagcatagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaacatctga 464 |||| ||||||||||||| | || || || ||||||| ||||||||| |||| ||| || Sbjct: 410 tagcgtagaaagaccctgcgagaatgcttgcagatctgaactggagtcagcaagatcaga 351 Query: 465 gagcaactgagataccctttgagccctgagttctttgatatactcctggtagttttcagg 524 |||| | ||||| || ||| |||||| || | || ||||| | ||| |||||||||||| Sbjct: 350 gagcgaatgagacactttttcagccctaagcttttggatatgccccttgtagttttcagg 291 Query: 525 gttttccctccaggcaacaaaagcatcatcatcatcccat 564 | ||| |||||||||||||||||||||| ||||||||| Sbjct: 290 actgtccttccaggcaacaaaagcatcatcgtcatcccat 251
>gb|BT024126.1| Zea mays clone EL01N0450A06 mRNA sequence Length = 2038 Score = 143 bits (72), Expect = 8e-31 Identities = 183/220 (83%) Strand = Plus / Minus Query: 345 aaggaccttcttgacttcctcaacaaactgtgctctccttgagggatccatcttctctag 404 |||||||||||||||||||| |||||||| |||||| |||||||||||||| |||| Sbjct: 1554 aaggaccttcttgacttcctgaacaaacttcgctctctgagagggatccatcttatctaa 1495 Query: 405 tagcatagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaacatctga 464 |||| ||||||||||||| | || || || ||||||| ||||||||| |||| ||| || Sbjct: 1494 tagcgtagaaagaccctgcgagaatgcttgcagatctgaactggagtcagcaagatcaga 1435 Query: 465 gagcaactgagataccctttgagccctgagttctttgatatactcctggtagttttcagg 524 |||| | ||||| || ||| |||||| || | || ||||| | ||| |||||||||||| Sbjct: 1434 gagcgaatgagacactttttcagccctaagcttttggatatgccccttgtagttttcagg 1375 Query: 525 gttttccctccaggcaacaaaagcatcatcatcatcccat 564 | ||| |||||||||||||||||||||| ||||||||| Sbjct: 1374 actgtccttccaggcaacaaaagcatcatcgtcatcccat 1335
>gb|BT019212.1| Zea mays clone Contig885.F mRNA sequence Length = 1242 Score = 131 bits (66), Expect = 3e-27 Identities = 192/234 (82%) Strand = Plus / Plus Query: 316 ttggatgcgttggtatcatctgatcatttaaggaccttcttgacttcctcaacaaactgt 375 ||||||| ||||||||||| | ||||| ||| |||||||||||||||| |||||||| Sbjct: 1009 ttggatgggttggtatcatatcatcatccaagaaccttcttgacttcctgaacaaacttc 1068 Query: 376 gctctccttgagggatccatcttctctagtagcatagaaagaccctgtggcaaggcctgt 435 ||||| || ||||||||||| |||| ||| || |||||||||| | || || ||| Sbjct: 1069 actctctgagaaggatccatcttatctaatagtgtaaaaagaccctgcgagaatgcttgt 1128 Query: 436 agatctggactggagtctgcaacatctgagagcaactgagataccctttgagccctgagt 495 ||||||| ||||||||| |||| ||| |||||| ||||| |||| |||||||||| || Sbjct: 1129 agatctgaactggagtcagcaagatcagagagcgactgaaatactttttgagcccttagc 1188 Query: 496 tctttgatatactcctggtagttttcagggttttccctccaggcaacaaaagca 549 |||| |||||| ||| |||||||||||| | ||| ||||||||||||||||| Sbjct: 1189 tcttggatatatcccttgtagttttcaggactgtccttccaggcaacaaaagca 1242
>dbj|AK059261.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-A08, full insert sequence Length = 975 Score = 129 bits (65), Expect = 1e-26 Identities = 182/221 (82%) Strand = Plus / Minus Query: 345 aaggaccttcttgacttcctcaacaaactgtgctctccttgagggatccatcttctctag 404 |||||||||| ||| ||| ||||||| || ||||| || |||||||||||||| ||||| Sbjct: 557 aaggaccttcctgatttcttcaacaagttgagctcttctagagggatccatcttatctag 498 Query: 405 tagcatagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaacatctga 464 || ||| |||||||||||||||| ||| || | ||||| ||||| |||| || | ||| Sbjct: 497 taacatggaaagaccctgtggcagggcttgcaaatctgagctggaatctgaaagacttga 438 Query: 465 gagcaactgagataccctttgagccctgagttctttgatatactcctggtagttttcagg 524 ||| | || ||||| ||||||||| | || | || ||||| |||| |||||||||||| Sbjct: 437 gagggattgggatactctttgagccttaagatattgaatataatccttgtagttttcagg 378 Query: 525 gttttccctccaggcaacaaaagcatcatcatcatcccatt 565 ||| ||| |||| |||||||||||||| ||||||||||||| Sbjct: 377 gttatccatccaagcaacaaaagcatcgtcatcatcccatt 337 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 602 taccatttctggatcagctcgattgctg 629 |||||||||| ||||||||||||||||| Sbjct: 316 taccatttcttgatcagctcgattgctg 289
>gb|AY109547.1| Zea mays CL2223_1 mRNA sequence Length = 7466 Score = 129 bits (65), Expect = 1e-26 Identities = 177/216 (81%) Strand = Plus / Minus Query: 349 accttcttgacttcctcaacaaactgtgctctccttgagggatccatcttctctagtagc 408 |||||||||||||||| |||||||| ||||| || ||||||||||| |||| ||| Sbjct: 7004 accttcttgacttcctgaacaaacttcactctctgagaaggatccatcttatctaatagt 6945 Query: 409 atagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaacatctgagagc 468 ||||||||||||| | || || |||||||||| ||||||||| |||| ||| |||||| Sbjct: 6944 gtagaaagaccctgcgagaatgcttgtagatctgaactggagtcagcaagatcagagagc 6885 Query: 469 aactgagataccctttgagccctgagttctttgatatactcctggtagttttcagggttt 528 |||||||||| ||||||| || | || ||||| | ||| |||||||||||| | Sbjct: 6884 gactgagatacnnnnngagccctaagcttttggatatgccccttgtagttttcaggactg 6825 Query: 529 tccctccaggcaacaaaagcatcatcatcatcccat 564 ||| |||||||||||||||||||||| ||||||||| Sbjct: 6824 tccttccaggcaacaaaagcatcatcgtcatcccat 6789
>gb|AC135922.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0411C02, complete sequence Length = 145676 Score = 91.7 bits (46), Expect = 3e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 400 tctagtagcatagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaaca 459 ||||||| ||| |||||||||||||||| ||| || | ||||| ||||| |||| || | Sbjct: 11437 tctagtaacatggaaagaccctgtggcagggcttgcaaatctgagctggaatctgaaaga 11496 Query: 460 tctgagagcaactgagataccctttgagccctgagttctttgatatactcctggtagttt 519 |||||| | || ||||| ||||||||| | || | || ||||| |||| ||||||| Sbjct: 11497 cttgagagggattgggatactctttgagccttaagatattgaatataatccttgtagttt 11556 Query: 520 tcagggttttccctccaggcaacaaaagcatcatcatcatcccatt 565 |||||||| ||| |||| |||||||||||||| ||||||||||||| Sbjct: 11557 tcagggttatccatccaagcaacaaaagcatcgtcatcatcccatt 11602 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 602 taccatttctggatcagctcgattgctg 629 |||||||||| ||||||||||||||||| Sbjct: 11623 taccatttcttgatcagctcgattgctg 11650 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 345 aaggaccttcttgacttcctcaacaaactgtgctctccttgagggatccatct 397 |||||||||| ||| ||| ||||||| || ||||| || ||||||||||||| Sbjct: 11237 aaggaccttcctgatttcttcaacaagttgagctcttctagagggatccatct 11289
>gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0508G08, complete sequence Length = 141383 Score = 91.7 bits (46), Expect = 3e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 400 tctagtagcatagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaaca 459 ||||||| ||| |||||||||||||||| ||| || | ||||| ||||| |||| || | Sbjct: 91906 tctagtaacatggaaagaccctgtggcagggcttgcaaatctgagctggaatctgaaaga 91965 Query: 460 tctgagagcaactgagataccctttgagccctgagttctttgatatactcctggtagttt 519 |||||| | || ||||| ||||||||| | || | || ||||| |||| ||||||| Sbjct: 91966 cttgagagggattgggatactctttgagccttaagatattgaatataatccttgtagttt 92025 Query: 520 tcagggttttccctccaggcaacaaaagcatcatcatcatcccatt 565 |||||||| ||| |||| |||||||||||||| ||||||||||||| Sbjct: 92026 tcagggttatccatccaagcaacaaaagcatcgtcatcatcccatt 92071 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 602 taccatttctggatcagctcgattgctg 629 |||||||||| ||||||||||||||||| Sbjct: 92092 taccatttcttgatcagctcgattgctg 92119 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 345 aaggaccttcttgacttcctcaacaaactgtgctctccttgagggatccatct 397 |||||||||| ||| ||| ||||||| || ||||| || ||||||||||||| Sbjct: 91706 aaggaccttcctgatttcttcaacaagttgagctcttctagagggatccatct 91758
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 91.7 bits (46), Expect = 3e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 400 tctagtagcatagaaagaccctgtggcaaggcctgtagatctggactggagtctgcaaca 459 ||||||| ||| |||||||||||||||| ||| || | ||||| ||||| |||| || | Sbjct: 12931360 tctagtaacatggaaagaccctgtggcagggcttgcaaatctgagctggaatctgaaaga 12931419 Query: 460 tctgagagcaactgagataccctttgagccctgagttctttgatatactcctggtagttt 519 |||||| | || ||||| ||||||||| | || | || ||||| |||| ||||||| Sbjct: 12931420 cttgagagggattgggatactctttgagccttaagatattgaatataatccttgtagttt 12931479 Query: 520 tcagggttttccctccaggcaacaaaagcatcatcatcatcccatt 565 |||||||| ||| |||| |||||||||||||| ||||||||||||| Sbjct: 12931480 tcagggttatccatccaagcaacaaaagcatcgtcatcatcccatt 12931525 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 602 taccatttctggatcagctcgattgctg 629 |||||||||| ||||||||||||||||| Sbjct: 12931546 taccatttcttgatcagctcgattgctg 12931573 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 345 aaggaccttcttgacttcctcaacaaactgtgctctccttgagggatccatct 397 |||||||||| ||| ||| ||||||| || ||||| || ||||||||||||| Sbjct: 12931160 aaggaccttcctgatttcttcaacaagttgagctcttctagagggatccatct 12931212
>gb|AY710293.1| Lolium multiflorum acetyl-CoA carboxylase (ACCase) gene, partial cds Length = 3044 Score = 69.9 bits (35), Expect = 1e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 523 gggttttccctccaggcaacaaaagcatcatcatcatcccatt 565 ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 3044 gggttctccctccaggcaacaaaagcatcgtcatcatcccatt 3002
>dbj|AB225228.1| Aspergillus oryzae cDNA, contig sequence: AoEST2080 Length = 860 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 aggaccttcttgacttcctcaac 368 ||||||||||||||||||||||| Sbjct: 249 aggaccttcttgacttcctcaac 227
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 346 aggaccttcttgacttcctcaac 368 ||||||||||||||||||||||| Sbjct: 643415 aggaccttcttgacttcctcaac 643437
>ref|NM_131179.1| Danio rerio developing brain homeobox 2 (dbx2), mRNA Length = 1616 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 431 cctgtagatctggactggagtc 452 |||||||||||||||||||||| Sbjct: 96 cctgtagatctggactggagtc 75
>gb|BC091853.1| Danio rerio developing brain homeobox 2, mRNA (cDNA clone MGC:110519 IMAGE:7152486), complete cds Length = 1590 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 431 cctgtagatctggactggagtc 452 |||||||||||||||||||||| Sbjct: 98 cctgtagatctggactggagtc 77
>emb|BX247864.10| Zebrafish DNA sequence from clone CH211-225P16, complete sequence Length = 208758 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 aaacaagttttacaaaacaatg 223 |||||||||||||||||||||| Sbjct: 148776 aaacaagttttacaaaacaatg 148755
>gb|AF030286.1|AF030286 Danio rerio homeobox protein (hlx3) mRNA, complete cds Length = 1616 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 431 cctgtagatctggactggagtc 452 |||||||||||||||||||||| Sbjct: 96 cctgtagatctggactggagtc 75
>emb|BX927288.6| Zebrafish DNA sequence from clone DKEY-22O20 in linkage group 18, complete sequence Length = 123980 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 202 aaacaagttttacaaaacaatg 223 |||||||||||||||||||||| Sbjct: 75423 aaacaagttttacaaaacaatg 75444
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 caaacaagttttacaaaacaa 221 ||||||||||||||||||||| Sbjct: 2937871 caaacaagttttacaaaacaa 2937891
>ref|XM_390601.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10425.1) partial mRNA Length = 1440 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 aaggaccttcttgacttcctc 365 ||||||||||||||||||||| Sbjct: 1341 aaggaccttcttgacttcctc 1321
>emb|CR848001.13| Zebrafish DNA sequence from clone CH211-264G8 in linkage group 20, complete sequence Length = 96579 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 ctatatatgtacttcaagagaaacc 295 |||||||||||||||| |||||||| Sbjct: 26218 ctatatatgtacttcacgagaaacc 26194
>emb|BX572628.6| Zebrafish DNA sequence from clone CH211-223G7 in linkage group 4, complete sequence Length = 165454 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 ctatatatgtacttcaagagaaacc 295 |||||||||||||||| |||||||| Sbjct: 74688 ctatatatgtacttcacgagaaacc 74712
>gb|DQ108622.1| Nodipecten subnodosus clone NsubA007 microsatellite sequence Length = 739 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 aacaaaagcatcatcatcatc 560 ||||||||||||||||||||| Sbjct: 262 aacaaaagcatcatcatcatc 282
>emb|BX323822.7| Zebrafish DNA sequence from clone DKEY-46C2 in linkage group 19, complete sequence Length = 204327 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 ctatatatgtacttcaagagaaacc 295 |||||||||||||||| |||||||| Sbjct: 113414 ctatatatgtacttcacgagaaacc 113438 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 ctatatatgtacttcaagagaaacc 295 |||||||||||||||| |||||||| Sbjct: 112562 ctatatatgtacttcacgagaaacc 112586
>gb|AC092936.9| Homo sapiens 12 BAC RP11-286J13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 217112 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 197 actgcaaacaagttttacaaaacaa 221 |||| |||||||||||||||||||| Sbjct: 93445 actgaaaacaagttttacaaaacaa 93469
>emb|CR846100.11| Zebrafish DNA sequence from clone DKEYP-94B4, complete sequence Length = 172492 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 ctatatatgtacttcaagagaaacc 295 |||||||||||||||| |||||||| Sbjct: 170195 ctatatatgtacttcacgagaaacc 170219
>gb|AC138616.4| Mus musculus BAC clone RP23-403D16 from 9, complete sequence Length = 196304 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 cttcttgacttcctcaacaaa 371 ||||||||||||||||||||| Sbjct: 70801 cttcttgacttcctcaacaaa 70821
>gb|AC166075.2| Mus musculus BAC clone RP23-143L15 from chromosome 1, complete sequence Length = 212447 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 aataatgggagaagactgca 202 |||||||||||||||||||| Sbjct: 80799 aataatgggagaagactgca 80780
>gb|AC161754.4| Mus musculus BAC clone RP24-446K8 from chromosome 1, complete sequence Length = 158536 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 aataatgggagaagactgca 202 |||||||||||||||||||| Sbjct: 109938 aataatgggagaagactgca 109919
>gb|BC080508.1| Xenopus tropicalis cDNA clone IMAGE:7027691 Length = 1921 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 541 acaaaagcatcatcatcatcccat 564 ||||||| |||||||||||||||| Sbjct: 1640 acaaaaggatcatcatcatcccat 1617
>gb|AC079398.8| Homo sapiens BAC clone RP11-330E10 from 7, complete sequence Length = 63681 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 gcctccttagaagccaagta 603 |||||||||||||||||||| Sbjct: 60934 gcctccttagaagccaagta 60915
>emb|Z98753.1|HS238J17 Human DNA sequence from clone RP1-238J17 on chromosome 6q22, complete sequence Length = 111507 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 tgctctccttgagggatcca 394 |||||||||||||||||||| Sbjct: 65702 tgctctccttgagggatcca 65721
>emb|AL359920.15| Human DNA sequence from clone RP11-359P14 on chromosome 13 Contains a novel gene and a TAR DNA binding protein (TARDBP) pseudogene, the 5' UTR of a novel gene (FLJ21007) and 2 CpG islands, complete sequence Length = 226860 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 tcctgtttcagcctccttagaagc 597 ||||||||||||||||| |||||| Sbjct: 109885 tcctgtttcagcctcctgagaagc 109862
>emb|AL137068.10| Human DNA sequence from clone RP11-165P4 on chromosome 9q34.11-34.13 Contains a novel gene, the CEP1 gene for centrosomal protein 1 (FAN, CEP110), the RAB14 gene for RAB14, member RAS oncogene family (DKFZp762K0911), the 5' end of a novel gene and a CpG island, complete sequence Length = 147029 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 tcctgtttcagcctccttag 593 |||||||||||||||||||| Sbjct: 146686 tcctgtttcagcctccttag 146667
>emb|BX511121.14| Zebrafish DNA sequence from clone DKEYP-110A12 in linkage group 17, complete sequence Length = 101886 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 agcatcatcatcatcccatt 565 |||||||||||||||||||| Sbjct: 68836 agcatcatcatcatcccatt 68817
>gb|AC079313.35| Homo sapiens 12q BAC RP11-753H16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160232 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 tcctgtttcagcctccttagaagc 597 ||||||||||||||||| |||||| Sbjct: 109832 tcctgtttcagcctcctgagaagc 109809
>ref|NM_001016413.2| Xenopus tropicalis CD63 antigen (melanoma 1 antigen) (cd63), mRNA Length = 1900 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 541 acaaaagcatcatcatcatcccat 564 ||||||| |||||||||||||||| Sbjct: 1660 acaaaaggatcatcatcatcccat 1637
>gb|AC008082.12| Homo sapiens 3 BAC RP11-73N1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171619 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 catcatcatcatcccatttc 567 |||||||||||||||||||| Sbjct: 14359 catcatcatcatcccatttc 14340
>gb|AC025570.43| Homo sapiens 12 BAC RP11-681G7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 64110 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 tcctgtttcagcctccttagaagc 597 ||||||||||||||||| |||||| Sbjct: 11684 tcctgtttcagcctcctgagaagc 11661
>gb|AC153586.7| Mus musculus 6 BAC RP23-88E13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188553 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 atcatgcacattctgcattg 318 |||||||||||||||||||| Sbjct: 108809 atcatgcacattctgcattg 108828
>emb|BX820745.1|CNS0AADA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH65ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1309 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 caaaagcatcatcatcatcc 561 |||||||||||||||||||| Sbjct: 249 caaaagcatcatcatcatcc 230
>gb|AC010226.5|AC010226 Homo sapiens chromosome 5 clone CTC-286N18, complete sequence Length = 147140 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 gcctccttagaagccaagta 603 |||||||||||||||||||| Sbjct: 108272 gcctccttagaagccaagta 108253
>gb|AC092593.2| Homo sapiens BAC clone RP11-68D16 from 4, complete sequence Length = 128255 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 aatgggagaagactgcaaac 205 |||||||||||||||||||| Sbjct: 110359 aatgggagaagactgcaaac 110340
>gb|AC007971.3| Homo sapiens BAC clone RP11-510C23 from 2, complete sequence Length = 146705 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 gcctccttagaagccaagta 603 |||||||||||||||||||| Sbjct: 37298 gcctccttagaagccaagta 37279
>emb|AL512355.6|CNS07EF4 Human chromosome 14 DNA sequence BAC R-1087P8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 198273 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 tcctgtttcagcctccttag 593 |||||||||||||||||||| Sbjct: 103348 tcctgtttcagcctccttag 103329
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18, complete sequence Length = 248419 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gaaaccgatatcatgcacat 309 |||||||||||||||||||| Sbjct: 84741 gaaaccgatatcatgcacat 84760
>emb|AL935195.14| Zebrafish DNA sequence from clone CH211-277C7 in linkage group 14, complete sequence Length = 194053 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 actgcaaacaagttttacaa 216 |||||||||||||||||||| Sbjct: 134390 actgcaaacaagttttacaa 134371
>emb|CR761109.2| Xenopus tropicalis finished cDNA, clone TEgg024b01 Length = 1900 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 541 acaaaagcatcatcatcatcccat 564 ||||||| |||||||||||||||| Sbjct: 1660 acaaaaggatcatcatcatcccat 1637
>gb|AC005332.1|AC005332 Homo sapiens chromosome 17, clone hRPK.147_L_13, complete sequence Length = 216631 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 tcctgtttcagcctccttagaagc 597 ||||||||||||||||| |||||| Sbjct: 118601 tcctgtttcagcctcctgagaagc 118578
>emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 in linkage group 18, complete sequence Length = 193827 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gaaaccgatatcatgcacat 309 |||||||||||||||||||| Sbjct: 104387 gaaaccgatatcatgcacat 104406
>gb|AC055866.19| Homo sapiens chromosome 17, clone RP11-376M2, complete sequence Length = 204746 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 tcctgtttcagcctccttagaagc 597 ||||| |||||||||||||||||| Sbjct: 150195 tcctgcttcagcctccttagaagc 150172 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,003,257 Number of Sequences: 3902068 Number of extensions: 6003257 Number of successful extensions: 120373 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120116 Number of HSP's gapped (non-prelim): 232 length of query: 629 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 606 effective length of database: 17,143,297,704 effective search space: 10388838408624 effective search space used: 10388838408624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)