>SYV_NEIMA (Q9JX22) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 945

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 107 TEPGLHAQPDHFFPKRMNKTSRQATRTYET 196
           TEP  ++ PD +   R+N+T  Q T+ YET
Sbjct: 666 TEPRGYSFPDMWIVDRLNQTIEQVTQAYET 695

>SYV_NEIG1 (Q5F5W0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 945

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 110 EPGLHAQPDHFFPKRMNKTSRQATRTYET 196
           EP  H+ PD +   R+N+T  Q T+ YET
Sbjct: 667 EPRGHSFPDMWIIGRLNQTIEQVTQAYET 695

>NU2M_PISOC (P24996) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 353

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 276 MYIMILQISSTVLFVLNKGGLGNASCLVS*VLVACREVL 160
           M+++ + +SSTV  + N+G L N S L    LV C  V+
Sbjct: 204 MFVVYIVLSSTVFLINNEGNLYNLSSLAR--LVYCNNVM 240

>ATG2_DEBHA (Q6BTX0) Autophagy-related protein 2|
          Length = 1903

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 73  FDYMRIHRMMVHRAWTSCPARPFLSQKNEQNFTASNKNL 189
           FD +RIH ++V       P   F S  N  NF   N N+
Sbjct: 417 FDKLRIHNIIVSATSALLPTGQFASASNSLNFIFHNLNI 455

>AP1_ARATH (P35631) Floral homeotic protein APETALA1 (Agamous-like MADS-box|
           protein AGL7)
          Length = 256

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 8   PIPGENYRVQHPVIILHFTKPFL 76
           P+P + +++QHP ++ H   PFL
Sbjct: 198 PLPPQQHQIQHPYMLSHQPSPFL 220

>BACC_BACLI (O68008) Bacitracin synthetase 3 (BA3) [Includes: ATP-dependent|
            isoleucine adenylase (IleA) (Isoleucine activase);
            ATP-dependent D-phenylalanine adenylase (D-PheA)
            (D-phenylalanine activase); ATP-dependent histidine
            adenylase (HisA) (Histidine
          Length = 6359

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 19/39 (48%), Positives = 22/39 (56%)
 Frame = -1

Query: 246  TVLFVLNKGGLGNASCLVS*VLVACREVLFILLGKKWSG 130
            TVL VLN+ GL N   +VS    AC E     L K+WSG
Sbjct: 1740 TVLDVLNESGLENLKVIVS-AGSACSEE----LAKRWSG 1773

>CSPG3_PANTR (Q5IS41) Neurocan core protein precursor (Chondroitin sulfate|
            proteoglycan 3)
          Length = 1321

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 166  SFVHSFGKEMVWLGMKSRL 110
            SF++SFG E  W+G+  R+
Sbjct: 1133 SFINSFGHENTWIGLNDRI 1151

>CSPG3_HUMAN (O14594) Neurocan core protein precursor (Chondroitin sulfate|
            proteoglycan 3)
          Length = 1321

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 166  SFVHSFGKEMVWLGMKSRL 110
            SF++SFG E  W+G+  R+
Sbjct: 1133 SFINSFGHENTWIGLNDRI 1151

>NFAT5_HUMAN (O94916) Nuclear factor of activated T-cells 5 (T-cell|
           transcription factor NFAT5) (NF-AT5)
           (Tonicity-responsive enhancer-binding protein)
           (TonE-binding protein) (TonEBP)
          Length = 1531

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 107 TEPGLHAQPDHFFPKRMNKTSRQATRTYETKQ 202
           TEP +H +PD+  P R      Q+  T   +Q
Sbjct: 849 TEPTVHTRPDNLLPGRAESVHPQSENTLSNQQ 880

>YA46_SCHPO (Q09726) Hypothetical protein C31A2.06 in chromosome I|
          Length = 542

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +1

Query: 73  FDYMRIHRMMVHRAWTSCPARPFLSQKNEQNFTASNK----NL*NQTASIS*PAFVEYKK 240
           F+Y+R +++ V    +    RPF SQK  +N    N     N   +  S   P +V+ K 
Sbjct: 6   FNYLRFNKLCVSFFRSKFDKRPFASQKFPENLVPDNSSNDANSQPEEVSSKKPWYVDEKH 65

Query: 241 N 243
           N
Sbjct: 66  N 66


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,290,376
Number of Sequences: 219361
Number of extensions: 793505
Number of successful extensions: 1423
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1423
length of database: 80,573,946
effective HSP length: 68
effective length of database: 65,657,398
effective search space used: 1575777552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)