>emb|AJ234603.1|HVU234603 Hordeum vulgare genomic DNA fragment; clone MWG0872.rev
          Length = 305

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 86/100 (86%), Gaps = 2/100 (2%)
 Strand = Plus / Minus

                                                                       
Query: 565 tcgtatctggatagcactttctggatcttcgtcgttcacggtcagggcctcgaagagcat 624
           |||||| ||| |||||||||||| | || | ||||||||  ||| | |||| ||||||| 
Sbjct: 305 tcgtatttgggtagcactttctgtacct-catcgttcacactcaagccctcaaagagcaa 247

                                                   
Query: 625 ggccttcgttgtccccagccgtctcgatgaatctctggat 664
           ||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 246 ggcct-cgttgtctccagccgtctcgatgaatctctggat 208

>gb|AY104127.1| Zea mays PCO110287 mRNA sequence
          Length = 1870

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 344  ggagctgccccctcccttcttgccgaatatcatctcgtcgaggtcatc 391
            ||||||||  |||||||||||||| ||||||||||||||||| |||||
Sbjct: 1459 ggagctgctacctcccttcttgccaaatatcatctcgtcgagatcatc 1412

>ref|XM_467289.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1624

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 354  cctcccttcttgccgaatatcatctcgtcgaggtcatc 391
            |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 1371 cctcccttcttgccaaatatcatctcatcgagatcatc 1334



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 288  attaggtcatctttcttcgtgtcctgctttt 318
            |||||||||||||||||||  ||||||||||
Sbjct: 1425 attaggtcatctttcttcggatcctgctttt 1395

>emb|AJ495787.1|OSA495787 Oryza sativa (japonica cultivar-group) mRNA for TOM1 protein
          Length = 1740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 354  cctcccttcttgccgaatatcatctcgtcgaggtcatc 391
            |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 1370 cctcccttcttgccaaatatcatctcatcgagatcatc 1333



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 291  aggtcatctttcttcgtgtcctgctttt 318
            ||||||||||||||||  ||||||||||
Sbjct: 1421 aggtcatctttcttcggatcctgctttt 1394

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 354      cctcccttcttgccgaatatcatctcgtcgaggtcatc 391
                |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 28694997 cctcccttcttgccaaatatcatctcatcgagatcatc 28694960



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 288      attaggtcatctttcttcgtgtcctgctttt 318
                |||||||||||||||||||  ||||||||||
Sbjct: 28695051 attaggtcatctttcttcggatcctgctttt 28695021

>dbj|AP005868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0666E12
          Length = 47765

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 354   cctcccttcttgccgaatatcatctcgtcgaggtcatc 391
             |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 43010 cctcccttcttgccaaatatcatctcatcgagatcatc 42973



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 288   attaggtcatctttcttcgtgtcctgctttt 318
             |||||||||||||||||||  ||||||||||
Sbjct: 43064 attaggtcatctttcttcggatcctgctttt 43034

>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0459B01
          Length = 163087

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 354   cctcccttcttgccgaatatcatctcgtcgaggtcatc 391
             |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 11570 cctcccttcttgccaaatatcatctcatcgagatcatc 11533



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 288   attaggtcatctttcttcgtgtcctgctttt 318
             |||||||||||||||||||  ||||||||||
Sbjct: 11624 attaggtcatctttcttcggatcctgctttt 11594

>dbj|AK066018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047D24, full
            insert sequence
          Length = 1624

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 354  cctcccttcttgccgaatatcatctcgtcgaggtcatc 391
            |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 1371 cctcccttcttgccaaatatcatctcatcgagatcatc 1334



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 288  attaggtcatctttcttcgtgtcctgctttt 318
            |||||||||||||||||||  ||||||||||
Sbjct: 1425 attaggtcatctttcttcggatcctgctttt 1395

>ref|NM_197898.1| Oryza sativa (japonica cultivar-group) hepatocyte growth
           factor-regulated tyrosine kinase substrate-like protein
           (OSJNBa0035H01.5), mRNA
          Length = 1554

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 630 tcgttgtccccagccgtctcgatgaatctctggatgg 666
           |||||||| ||||||||||| |||| |||||||||||
Sbjct: 952 tcgttgtcaccagccgtctcaatgattctctggatgg 916

>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete
             sequence
          Length = 64582

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 630   tcgttgtccccagccgtctcgatgaatctctggatgg 666
             |||||||| ||||||||||| |||| |||||||||||
Sbjct: 49729 tcgttgtcaccagccgtctcaatgattctctggatgg 49693

>emb|AJ495791.1|OSA495791 Oryza sativa (japonica cultivar-group) mRNA for TOM2 protein
          Length = 1606

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 630 tcgttgtccccagccgtctcgatgaatctctggatgg 666
           |||||||| ||||||||||| |||| |||||||||||
Sbjct: 968 tcgttgtcaccagccgtctcaatgattctctggatgg 932

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 630      tcgttgtccccagccgtctcgatgaatctctggatgg 666
                |||||||| ||||||||||| |||| |||||||||||
Sbjct: 22534011 tcgttgtcaccagccgtctcaatgattctctggatgg 22533975

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 630      tcgttgtccccagccgtctcgatgaatctctggatgg 666
                |||||||| ||||||||||| |||| |||||||||||
Sbjct: 22546479 tcgttgtcaccagccgtctcaatgattctctggatgg 22546443

>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence
          Length = 236455

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 373   tcatctcgtcgaggtcatcgagcac 397
             ||||||| |||||||||||||||||
Sbjct: 58946 tcatctcatcgaggtcatcgagcac 58922

>emb|AL139428.15| Human DNA sequence from clone RP5-977F20 on chromosome 1, complete
             sequence
          Length = 43679

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 246   cttctcatcccaggaactggc 266
             |||||||||||||||||||||
Sbjct: 19097 cttctcatcccaggaactggc 19077

>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 491    gcttctgcggggatcggtat 510
              ||||||||||||||||||||
Sbjct: 721398 gcttctgcggggatcggtat 721379

>ref|XM_418180.1| PREDICTED: Gallus gallus similar to glycoprotein Ib (LOC420059),
           mRNA
          Length = 2088

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 397 caccttcgtcttccccaggc 416
           ||||||||||||||||||||
Sbjct: 825 caccttcgtcttccccaggc 806

>ref|XM_755265.1| Ustilago maydis 521 hypothetical protein (UM04211.1) partial mRNA
          Length = 1704

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 581 ctttctggatcttcgtcgtt 600
           ||||||||||||||||||||
Sbjct: 842 ctttctggatcttcgtcgtt 823

>emb|CR954257.1| Anopheles gambiae Pen-1 region; BAC clone 32F02 from library NotreDame1
             of Anopheles gambiae (African malaria mosquito) strain
             PEST
          Length = 137277

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   tccacatcctcctgggagga 346
             ||||||||||||||||||||
Sbjct: 18820 tccacatcctcctgggagga 18839

>gb|AC116709.4| Mus musculus chromosome 1, clone RP23-91L14, complete sequence
          Length = 188848

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    agccccatccacatcctcct 339
              ||||||||||||||||||||
Sbjct: 145891 agccccatccacatcctcct 145910

>gb|AC164076.3| Mus musculus chromosome 1, clone RP24-287C18, complete sequence
          Length = 185185

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   agccccatccacatcctcct 339
             ||||||||||||||||||||
Sbjct: 29755 agccccatccacatcctcct 29774

>gb|AC127789.4| Rattus norvegicus 1 BAC CH230-15M17 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 240825

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     agaacatgatgacaagtgaa 74
              ||||||||||||||||||||
Sbjct: 182637 agaacatgatgacaagtgaa 182656

>gb|AF389113.1|AF389113 Rhizobium sp. NGR234, cosmid pXB826, complete sequence
          Length = 35523

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   atctcgtcgaggtcatcgag 394
             ||||||||||||||||||||
Sbjct: 11850 atctcgtcgaggtcatcgag 11869

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 326  atccacatcctcctgggagg 345
            ||||||||||||||||||||
Sbjct: 9685 atccacatcctcctgggagg 9666

>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 491    gcttctgcggggatcggtat 510
              ||||||||||||||||||||
Sbjct: 691863 gcttctgcggggatcggtat 691844

>gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipiens
            quinquefasciatus-3940126D9, complete sequence
          Length = 125236

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 592  ttcgtcgttcacggtcagggcctc 615
            ||||||| ||||||||||||||||
Sbjct: 5943 ttcgtcgatcacggtcagggcctc 5920


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,129,264
Number of Sequences: 3902068
Number of extensions: 5129264
Number of successful extensions: 99634
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99456
Number of HSP's gapped (non-prelim): 177
length of query: 675
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 652
effective length of database: 17,143,297,704
effective search space: 11177430103008
effective search space used: 11177430103008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)