ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK101789.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
2dbj|AK060466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
3gb|AY107163.1| Zea mays PCO109318 mRNA sequence 418 e-114
4gb|BT017023.1| Zea mays clone EK07D2312C08.c mRNA sequence 236 7e-59
5gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 1... 119 1e-23
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 119 1e-23
8gb|AC092634.3| Homo sapiens BAC clone RP11-340I6 from 7, complet... 42 2.3
9gb|AC079790.6| Homo sapiens BAC clone RP11-484E6 from 2, complet... 42 2.3
10gb|AF111167.2|DJ293M10 Homo sapiens jun dimerization protein gen... 40 8.9
11gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genom... 40 8.9
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.9
13gb|AF398650.1| Lachnophorus elegantulus 28S large subunit riboso... 40 8.9
14emb|AL450107.11| Human DNA sequence from clone RP11-495K23 on ch... 40 8.9
15gb|AC130276.2| Homo sapiens chromosome 3 clone RP11-1076P5, comp... 40 8.9
16ref|NM_164677.1| Drosophila melanogaster slowmo CG9131-RA, trans... 40 8.9
17gb|AC022029.7| Homo sapiens chromosome 10 clone RP11-93L14, comp... 40 8.9
18ref|NM_079966.2| Drosophila melanogaster slowmo CG9131-RB, trans... 40 8.9
19gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, comp... 40 8.9
20gb|AY051484.1| Drosophila melanogaster GH14384 full length cDNA 40 8.9
21gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, r... 40 8.9
22dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
23dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
24dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
25gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21... 40 8.9
26gb|U37214.1|SIU37214 Simian immunodeficiency virus isolate G023 ... 40 8.9
27emb|BX323833.4| Pig DNA sequence from clone XX-554F3, complete s... 40 8.9
28gb|AC004758.1|AC004758 Drosophila melanogaster DNA sequence (P1s... 40 8.9

>dbj|AK101789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065I20, full
            insert sequence
          Length = 1878

 Score =  434 bits (219), Expect = e-118
 Identities = 375/427 (87%)
 Strand = Plus / Minus

                                                                        
Query: 224  cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 283
            ||||||||||||||||||||||| ||||| |||||||| |  ||||| |||| |||||| 
Sbjct: 1681 cactcgatgatcttgacaacagatgaatcgccgatcttctggaaaatgatcaacctgtca 1622

                                                                        
Query: 284  tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 343
            || |||||||  || || || || || ||||||||  |||||||||||||||||||  ||
Sbjct: 1621 tagggctttagcataccaaccgagcgaccatagttctgtgcaagttttatcccgtactct 1562

                                                                        
Query: 344  tctttggtgagcccaccggtttcagcctcgtcagtactccccatcaaagggtacacacct 403
            ||  ||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||
Sbjct: 1561 tccctggtgagcccaccagtttcagcctcctcagtactcgccatcaaagggtagacacct 1502

                                                                        
Query: 404  ctcacagaaaaacattgcctcgcctgcgttgtgccataagaacgccactttgatggatca 463
            ||  ||| |||||||||||| ||||| |||||||| |||||||||||||||| |||||||
Sbjct: 1501 cttgcagcaaaacattgccttgcctgagttgtgccgtaagaacgccactttgttggatca 1442

                                                                        
Query: 464  gagccctcgcgtgggaacacaactgctaaaactggcattggtggcctgtatttagcaact 523
            |||||||| |||||||| ||||| || || ||||||||||||||| |||| || ||||||
Sbjct: 1441 gagccctcacgtgggaagacaacggccaacactggcattggtggcttgtacttggcaact 1382

                                                                        
Query: 524  aacctggcagctctccctgagaaggtgaacacaacaatcgcagcagcttttactttcatt 583
            |||||||||||||| |||||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 1381 aacctggcagctcttcctgagaaagtgaacacaacgattgcagcagcttttaccttcatt 1322

                                                                        
Query: 584  gcagaacgaaccgctgatgatgccacagattcttcatgggccattggttcacctacatgc 643
            ||||  ||||||||||| |||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 1321 gcagtgcgaaccgctgaagatgccacagattcttcatggggcattggatcacctacatgc 1262

                   
Query: 644  ctcacta 650
             ||||||
Sbjct: 1261 ttcacta 1255



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>dbj|AK060466.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-C12, full
            insert sequence
          Length = 1723

 Score =  434 bits (219), Expect = e-118
 Identities = 375/427 (87%)
 Strand = Plus / Minus

                                                                        
Query: 224  cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 283
            ||||||||||||||||||||||| ||||| |||||||| |  ||||| |||| |||||| 
Sbjct: 1432 cactcgatgatcttgacaacagatgaatcgccgatcttctggaaaatgatcaacctgtca 1373

                                                                        
Query: 284  tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 343
            || |||||||  || || || || || ||||||||  |||||||||||||||||||  ||
Sbjct: 1372 tagggctttagcataccaaccgagcgaccatagttctgtgcaagttttatcccgtactct 1313

                                                                        
Query: 344  tctttggtgagcccaccggtttcagcctcgtcagtactccccatcaaagggtacacacct 403
            ||  ||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||
Sbjct: 1312 tccctggtgagcccaccagtttcagcctcctcagtactcgccatcaaagggtagacacct 1253

                                                                        
Query: 404  ctcacagaaaaacattgcctcgcctgcgttgtgccataagaacgccactttgatggatca 463
            ||  ||| |||||||||||| ||||| |||||||| |||||||||||||||| |||||||
Sbjct: 1252 cttgcagcaaaacattgccttgcctgagttgtgccgtaagaacgccactttgttggatca 1193

                                                                        
Query: 464  gagccctcgcgtgggaacacaactgctaaaactggcattggtggcctgtatttagcaact 523
            |||||||| |||||||| ||||| || || ||||||||||||||| |||| || ||||||
Sbjct: 1192 gagccctcacgtgggaagacaacggccaacactggcattggtggcttgtacttggcaact 1133

                                                                        
Query: 524  aacctggcagctctccctgagaaggtgaacacaacaatcgcagcagcttttactttcatt 583
            |||||||||||||| |||||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 1132 aacctggcagctcttcctgagaaagtgaacacaacgattgcagcagcttttaccttcatt 1073

                                                                        
Query: 584  gcagaacgaaccgctgatgatgccacagattcttcatgggccattggttcacctacatgc 643
            ||||  ||||||||||| |||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 1072 gcagtgcgaaccgctgaagatgccacagattcttcatggggcattggatcacctacatgc 1013

                   
Query: 644  ctcacta 650
             ||||||
Sbjct: 1012 ttcacta 1006



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>gb|AY107163.1| Zea mays PCO109318 mRNA sequence
          Length = 1040

 Score =  418 bits (211), Expect = e-114
 Identities = 376/431 (87%)
 Strand = Plus / Minus

                                                                       
Query: 224 cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 283
           ||||| |||||||||||||||||||||||||| ||||||||||| || |||| |||||||
Sbjct: 744 cactcaatgatcttgacaacagaagaatcaccaatcttttcaaagattatcaacctgtcg 685

                                                                       
Query: 284 tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 343
            | ||||| | |||||| || ||||| |||||| | |  |||||||||||||| ||  ||
Sbjct: 684 aaaggcttcactatgccaaccgaccgaccatagctcatcgcaagttttatcccatactct 625

                                                                       
Query: 344 tctttggtgagcccaccggtttcagcctcgtcagtactccccatcaaagggtacacacct 403
           || || || |||||||| ||||| ||||| |||||||||||||||||||||||||| |||
Sbjct: 624 tcctttgttagcccaccagtttcggcctcatcagtactccccatcaaagggtacacgcct 565

                                                                       
Query: 404 ctcacagaaaaacattgcctcgcctgcgttgtgccataagaacgccactttgatggatca 463
           ||||| |  |||||||| || ||||| |||||||||||||||||||||||||||||||| 
Sbjct: 564 ctcactgcgaaacattgtcttgcctgtgttgtgccataagaacgccactttgatggatcg 505

                                                                       
Query: 464 gagccctcgcgtgggaacacaactgctaaaactggcattggtggcctgtatttagcaact 523
           || || || |||||||| | ||||||||||| |||||||| |||||| || || ||||||
Sbjct: 504 gatccttcacgtgggaagataactgctaaaattggcattgttggcctatacttggcaact 445

                                                                       
Query: 524 aacctggcagctctccctgagaaggtgaacacaacaatcgcagcagcttttactttcatt 583
           ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 444 aacctcgcagctctccctgagaatgtgaacacaacaatggcagcagcttttactttgatt 385

                                                                       
Query: 584 gcagaacgaaccgctgatgatgccacagattcttcatgggccattggttcacctacatgc 643
           ||||||| |||||||| ||||||||||||||| || |||| |||||| ||||||||||||
Sbjct: 384 gcagaaccaaccgctgctgatgccacagattcctcgtggggcattgggtcacctacatgc 325

                      
Query: 644 ctcactacttt 654
           | || ||||||
Sbjct: 324 cacattacttt 314



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>gb|BT017023.1| Zea mays clone EK07D2312C08.c mRNA sequence
          Length = 540

 Score =  236 bits (119), Expect = 7e-59
 Identities = 233/271 (85%)
 Strand = Plus / Minus

                                                                       
Query: 224 cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 283
           ||||| |||||||||||||||||||||||||| ||||||||||| || |||| |||||||
Sbjct: 282 cactcaatgatcttgacaacagaagaatcaccaatcttttcaaagattatcaacctgtcg 223

                                                                       
Query: 284 tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 343
            | ||||| | |||||| || ||||| |||||| | |  |||||||||||||| ||  ||
Sbjct: 222 aaaggcttcactatgccaaccgaccgaccatagctcatcgcaagttttatcccatactct 163

                                                                       
Query: 344 tctttggtgagcccaccggtttcagcctcgtcagtactccccatcaaagggtacacacct 403
           || || || |||||||| ||||| ||||| |||||||||||||||||||||||||| |||
Sbjct: 162 tcctttgttagcccaccagtttcggcctcatcagtactccccatcaaagggtacacgcct 103

                                                                       
Query: 404 ctcacagaaaaacattgcctcgcctgcgttgtgccataagaacgccactttgatggatca 463
           ||||| |  |||||||| || ||||| |||||||||||||||||||||||||||||||| 
Sbjct: 102 ctcactgcgaaacattgtcttgcctgtgttgtgccataagaacgccactttgatggatcg 43

                                          
Query: 464 gagccctcgcgtgggaacacaactgctaaaa 494
           || || || |||||||| | |||||||||||
Sbjct: 42  gatccttcacgtgggaagataactgctaaaa 12



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>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09,
             complete sequence
          Length = 135363

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                         
Query: 426   cctgcgttgtgccataagaacgccactttgatggatcagagccctcgcgtgggaacacaa 485
             |||| |||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 42887 cctgagttgtgccgtaagaacgccactttgttggatcagagccctcacgtgggaagacaa 42828

                                                         
Query: 486   ctgctaaaactggcattggtggcctgtatttagcaactaacctg 529
             | || || ||||||||||||||| |||| || ||||||||||||
Sbjct: 42827 cggccaacactggcattggtggcttgtacttggcaactaacctg 42784



 Score =  111 bits (56), Expect = 3e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                         
Query: 224   cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 283
             ||||||||||||||||||||||| ||||| |||||||| |  ||||| |||| |||||| 
Sbjct: 43407 cactcgatgatcttgacaacagatgaatcgccgatcttctggaaaatgatcaacctgtca 43348

                                                                         
Query: 284   tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 343
             || |||||||  || || || || || ||||||||  |||||||||||||||||||  ||
Sbjct: 43347 tagggctttagcataccaaccgagcgaccatagttctgtgcaagttttatcccgtactct 43288

                                         
Query: 344   tctttggtgagcccaccggtttcagcct 371
             ||  ||||||||||||| ||||||||||
Sbjct: 43287 tccctggtgagcccaccagtttcagcct 43260



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                         
Query: 525   acctggcagctctccctgagaaggtgaacacaacaatcgcagcagcttttactttcattg 584
             ||||||||||||| |||||||| ||||||||||| || |||||||||||||| |||||||
Sbjct: 42713 acctggcagctcttcctgagaaagtgaacacaacgattgcagcagcttttaccttcattg 42654

                
Query: 585   cag 587
             |||
Sbjct: 42653 cag 42651



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                       
Query: 593   accgctgatgatgccacagattcttcatgggccattggttcacctacatgcctcacta 650
             |||||||| |||||||||||||||||||||| |||||| |||||||||||| ||||||
Sbjct: 42564 accgctgaagatgccacagattcttcatggggcattggatcacctacatgcttcacta 42507



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 369   cctcgtcagtactccccatcaaagggtacacacctctcacagaaaaacattgcctcgcct 428
             |||| ||||||||| ||||||||||||| ||||||||  ||| |||||||||||| ||||
Sbjct: 43050 cctcctcagtactcgccatcaaagggtagacacctcttgcagcaaaacattgccttgcct 42991

              
Query: 429   g 429
             |
Sbjct: 42990 g 42990



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                           
Query: 426     cctgcgttgtgccataagaacgccactttgatggatcagagccctcgcgtgggaacacaa 485
               |||| |||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 5986804 cctgagttgtgccgtaagaacgccactttgttggatcagagccctcacgtgggaagacaa 5986745

                                                           
Query: 486     ctgctaaaactggcattggtggcctgtatttagcaactaacctg 529
               | || || ||||||||||||||| |||| || ||||||||||||
Sbjct: 5986744 cggccaacactggcattggtggcttgtacttggcaactaacctg 5986701



 Score =  111 bits (56), Expect = 3e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                           
Query: 224     cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 283
               ||||||||||||||||||||||| ||||| |||||||| |  ||||| |||| |||||| 
Sbjct: 5987324 cactcgatgatcttgacaacagatgaatcgccgatcttctggaaaatgatcaacctgtca 5987265

                                                                           
Query: 284     tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 343
               || |||||||  || || || || || ||||||||  |||||||||||||||||||  ||
Sbjct: 5987264 tagggctttagcataccaaccgagcgaccatagttctgtgcaagttttatcccgtactct 5987205

                                           
Query: 344     tctttggtgagcccaccggtttcagcct 371
               ||  ||||||||||||| ||||||||||
Sbjct: 5987204 tccctggtgagcccaccagtttcagcct 5987177



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                           
Query: 525     acctggcagctctccctgagaaggtgaacacaacaatcgcagcagcttttactttcattg 584
               ||||||||||||| |||||||| ||||||||||| || |||||||||||||| |||||||
Sbjct: 5986630 acctggcagctcttcctgagaaagtgaacacaacgattgcagcagcttttaccttcattg 5986571

                  
Query: 585     cag 587
               |||
Sbjct: 5986570 cag 5986568



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                         
Query: 593     accgctgatgatgccacagattcttcatgggccattggttcacctacatgcctcacta 650
               |||||||| |||||||||||||||||||||| |||||| |||||||||||| ||||||
Sbjct: 5986481 accgctgaagatgccacagattcttcatggggcattggatcacctacatgcttcacta 5986424



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                           
Query: 369     cctcgtcagtactccccatcaaagggtacacacctctcacagaaaaacattgcctcgcct 428
               |||| ||||||||| ||||||||||||| ||||||||  ||| |||||||||||| ||||
Sbjct: 5986967 cctcctcagtactcgccatcaaagggtagacacctcttgcagcaaaacattgccttgcct 5986908

                
Query: 429     g 429
               |
Sbjct: 5986907 g 5986907



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                           
Query: 426     cctgcgttgtgccataagaacgccactttgatggatcagagccctcgcgtgggaacacaa 485
               |||| |||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 6053281 cctgagttgtgccgtaagaacgccactttgttggatcagagccctcacgtgggaagacaa 6053222

                                                           
Query: 486     ctgctaaaactggcattggtggcctgtatttagcaactaacctg 529
               | || || ||||||||||||||| |||| || ||||||||||||
Sbjct: 6053221 cggccaacactggcattggtggcttgtacttggcaactaacctg 6053178



 Score =  111 bits (56), Expect = 3e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                           
Query: 224     cactcgatgatcttgacaacagaagaatcaccgatcttttcaaaaataatcaccctgtcg 283
               ||||||||||||||||||||||| ||||| |||||||| |  ||||| |||| |||||| 
Sbjct: 6053801 cactcgatgatcttgacaacagatgaatcgccgatcttctggaaaatgatcaacctgtca 6053742

                                                                           
Query: 284     tatggctttattatgccgactgaccggccatagtttagtgcaagttttatcccgtatgct 343
               || |||||||  || || || || || ||||||||  |||||||||||||||||||  ||
Sbjct: 6053741 tagggctttagcataccaaccgagcgaccatagttctgtgcaagttttatcccgtactct 6053682

                                           
Query: 344     tctttggtgagcccaccggtttcagcct 371
               ||  ||||||||||||| ||||||||||
Sbjct: 6053681 tccctggtgagcccaccagtttcagcct 6053654



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                           
Query: 525     acctggcagctctccctgagaaggtgaacacaacaatcgcagcagcttttactttcattg 584
               ||||||||||||| |||||||| ||||||||||| || |||||||||||||| |||||||
Sbjct: 6053107 acctggcagctcttcctgagaaagtgaacacaacgattgcagcagcttttaccttcattg 6053048

                  
Query: 585     cag 587
               |||
Sbjct: 6053047 cag 6053045



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                         
Query: 593     accgctgatgatgccacagattcttcatgggccattggttcacctacatgcctcacta 650
               |||||||| |||||||||||||||||||||| |||||| |||||||||||| ||||||
Sbjct: 6052958 accgctgaagatgccacagattcttcatggggcattggatcacctacatgcttcacta 6052901



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                           
Query: 369     cctcgtcagtactccccatcaaagggtacacacctctcacagaaaaacattgcctcgcct 428
               |||| ||||||||| ||||||||||||| ||||||||  ||| |||||||||||| ||||
Sbjct: 6053444 cctcctcagtactcgccatcaaagggtagacacctcttgcagcaaaacattgccttgcct 6053385

                
Query: 429     g 429
               |
Sbjct: 6053384 g 6053384



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>gb|AC092634.3| Homo sapiens BAC clone RP11-340I6 from 7, complete sequence
          Length = 194142

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 535    tctccctgagaaggtgaacac 555
              |||||||||||||||||||||
Sbjct: 164009 tctccctgagaaggtgaacac 164029



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>gb|AC079790.6| Homo sapiens BAC clone RP11-484E6 from 2, complete sequence
          Length = 161723

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 563    gcagcagcttttactttcatt 583
              |||||||||||||||||||||
Sbjct: 119785 gcagcagcttttactttcatt 119765



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>gb|AF111167.2|DJ293M10 Homo sapiens jun dimerization protein gene, partial cds; cfos gene,
             complete cds; and unknown gene
          Length = 202267

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 171   gtgtagttgagactgttgcctgag 194
             |||||||||||||||||| |||||
Sbjct: 59415 gtgtagttgagactgttgtctgag 59392



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>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete
              sequence
          Length = 166888

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    tttcaaaaataatcaccctg 280
              ||||||||||||||||||||
Sbjct: 139314 tttcaaaaataatcaccctg 139333



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 261      tttcaaaaataatcaccctg 280
                ||||||||||||||||||||
Sbjct: 33525766 tttcaaaaataatcaccctg 33525747



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>gb|AF398650.1| Lachnophorus elegantulus 28S large subunit ribosomal RNA gene,
           partial sequence
          Length = 1081

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 55  gtatatatataaacctaaag 74
           ||||||||||||||||||||
Sbjct: 168 gtatatatataaacctaaag 149



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>emb|AL450107.11| Human DNA sequence from clone RP11-495K23 on chromosome 13 Contains the
             3' end of a novel gene, complete sequence
          Length = 50886

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 483   caactgctaaaactggcatt 502
             ||||||||||||||||||||
Sbjct: 36678 caactgctaaaactggcatt 36697



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>gb|AC130276.2| Homo sapiens chromosome 3 clone RP11-1076P5, complete sequence
          Length = 74595

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    caacaagtatatatataaac 68
             ||||||||||||||||||||
Sbjct: 14622 caacaagtatatatataaac 14641



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>ref|NM_164677.1| Drosophila melanogaster slowmo CG9131-RA, transcript variant A
            (slmo), mRNA
          Length = 1288

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   tatatatataaacctaaagt 75
            ||||||||||||||||||||
Sbjct: 1190 tatatatataaacctaaagt 1209



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>gb|AC022029.7| Homo sapiens chromosome 10 clone RP11-93L14, complete sequence
          Length = 140040

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     ccaaagtgctaaacaggaca 96
              ||||||||||||||||||||
Sbjct: 111413 ccaaagtgctaaacaggaca 111432



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>ref|NM_079966.2| Drosophila melanogaster slowmo CG9131-RB, transcript variant B
            (slmo), mRNA
          Length = 1169

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   tatatatataaacctaaagt 75
            ||||||||||||||||||||
Sbjct: 1071 tatatatataaacctaaagt 1090



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>gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, complete sequence
          Length = 166114

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    atcttttcaaaaataatcac 276
              ||||||||||||||||||||
Sbjct: 130443 atcttttcaaaaataatcac 130462



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>gb|AY051484.1| Drosophila melanogaster GH14384 full length cDNA
          Length = 1261

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   tatatatataaacctaaagt 75
            ||||||||||||||||||||
Sbjct: 1143 tatatatataaacctaaagt 1162



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>gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, region 25F-26A, BAC clone
              BACR10M11, complete sequence
          Length = 174832

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     tatatatataaacctaaagt 75
              ||||||||||||||||||||
Sbjct: 103665 tatatatataaacctaaagt 103684



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 261      tttcaaaaataatcaccctg 280
                ||||||||||||||||||||
Sbjct: 33616238 tttcaaaaataatcaccctg 33616219



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 141      ggagaacaaaaggaggaggg 160
                ||||||||||||||||||||
Sbjct: 26884406 ggagaacaaaaggaggaggg 26884387



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>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1001_D02
          Length = 129081

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   ggagaacaaaaggaggaggg 160
             ||||||||||||||||||||
Sbjct: 62949 ggagaacaaaaggaggaggg 62930



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>gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21 of 83 of the complete
             sequence
          Length = 260673

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    tatatatataaacctaaagt 75
             ||||||||||||||||||||
Sbjct: 90414 tatatatataaacctaaagt 90395



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>gb|U37214.1|SIU37214 Simian immunodeficiency virus isolate G023 tat, rev, and envelope
           glycoprotein (env) genes, partial cds
          Length = 444

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 cttctttggtgagcccaccg 361
           ||||||||||||||||||||
Sbjct: 301 cttctttggtgagcccaccg 282



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>emb|BX323833.4| Pig DNA sequence from clone XX-554F3, complete sequence
          Length = 121483

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 532    agctctccctgagaaggtga 551
              ||||||||||||||||||||
Sbjct: 102893 agctctccctgagaaggtga 102874



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>gb|AC004758.1|AC004758 Drosophila melanogaster DNA sequence (P1s DS06106 (D123), DS05973
             (D122), and DS08584 (D118)), complete sequence
          Length = 174311

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    tatatatataaacctaaagt 75
             ||||||||||||||||||||
Sbjct: 43377 tatatatataaacctaaagt 43396


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,550,173
Number of Sequences: 3902068
Number of extensions: 6550173
Number of successful extensions: 127284
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126966
Number of HSP's gapped (non-prelim): 318
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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