ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20k20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_479247.1| Oryza sativa (japonica cultivar-group), mRNA 268 1e-68
2gb|AY554050.1| Oryza sativa (japonica cultivar-group) drought-in... 268 1e-68
3dbj|AK121089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 1e-68
4gb|AY607689.1| Oryza sativa (japonica cultivar-group) low temper... 268 1e-68
5gb|AY823549.1| Pennisetum glaucum low temperature and salt respo... 244 2e-61
6gb|AY103848.1| Zea mays PCO061754 mRNA sequence 234 2e-58
7gb|AY554051.1| Oryza sativa (japonica cultivar-group) drought-in... 170 2e-39
8gb|AF503583.2| Oryza sativa (indica cultivar-group) early drough... 170 2e-39
9dbj|AK119249.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-39
10gb|AY607690.1| Oryza sativa (japonica cultivar-group) low temper... 170 2e-39
11dbj|AB161676.1| Leymus chinensis AcPMP3-1 mRNA for plasma membra... 163 6e-37
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 145 1e-31
13dbj|AP003749.3| Oryza sativa (japonica cultivar-group) genomic D... 145 1e-31
14gb|AY105302.1| Zea mays PCO074610 mRNA sequence 141 2e-30
15ref|NM_184595.1| Oryza sativa (japonica cultivar-group), mRNA 137 3e-29
16ref|NM_183567.1| Oryza sativa (japonica cultivar-group), predic... 131 2e-27
17dbj|AB161677.1| Leymus chinensis AcPMP3-2 mRNA for plasma membra... 117 3e-23
18gb|BT017793.1| Zea mays clone EL01N0504G08.c mRNA sequence 111 2e-21
19gb|AY111401.1| Zea mays CL37957_1 mRNA sequence 109 7e-21
20gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome... 103 5e-19
21dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
22dbj|AK070577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
23dbj|AK099873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
24gb|DQ078765.1| Zea mays clone Zmcoi6.8 cold-inducible unknown mRNA 94 4e-16
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 88 3e-14
26gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 88 3e-14
27dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
28dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
29dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
30gb|AY177890.1| Zea mays clone BAC ZMBBb_95H21 ABA-induced gene, ... 80 7e-12
31gb|AY107179.1| Zea mays PCO146860 mRNA sequence 80 7e-12
32gb|AY131234.1| Triticum aestivum putative low temperature and sa... 74 4e-10
33dbj|AK058343.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
34gb|BT019258.1| Zea mays clone Contig931.F mRNA sequence 66 1e-07
35gb|AY108684.1| Zea mays PCO116945 mRNA sequence 66 1e-07
36ref|NM_183563.1| Oryza sativa (japonica cultivar-group), predic... 64 4e-07
37dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
38dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
39dbj|AK121018.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
40ref|XM_475521.1| Oryza sativa (japonica cultivar-group), predic... 60 6e-06
41gb|AF220491.1|AF220491 Fragaria x ananassa O-methyltransferase (... 56 1e-04
42gb|AY823550.1| Pennisetum glaucum low temperature and salt respo... 54 4e-04
43dbj|AK062410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
44gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
45dbj|AB030211.1| Oryza sativa osr8 mRNA for hydrophobic polypepti... 54 4e-04
46emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 52 0.001
47gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome ... 50 0.006
48dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
49dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
50dbj|AB221353.1| Triticum aestivum wpi6 gene for plasma membrane ... 48 0.023
51dbj|AB030210.1| Triticum aestivum wpi6 mRNA for hydrophobic poly... 48 0.023
52emb|AJ310994.1|HVU310994 Hordeum vulgare lt101.1 gene for putati... 48 0.023
53emb|Z25537.1|HVBLT101 H.vulgare blt101 mRNA 48 0.023
54dbj|AP006122.1| Lotus japonicus genomic DNA, chromosome 1, clone... 48 0.023
55ref|XM_470667.1| Oryza sativa (japonica cultivar-group), predic... 46 0.092
56gb|AY177891.1| Sorghum bicolor clone BAC 8070 ABA-induced gene, ... 46 0.092
57gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.092
58gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.092
59dbj|AK070872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.092
60dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
61dbj|AK108564.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
62emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 44 0.36
63gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, co... 42 1.4
64ref|XM_959093.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.4
65ref|XM_330572.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.4
66ref|XM_809702.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.4
67gb|AE014075.1| Escherichia coli CFT073, complete genome 42 1.4
68gb|CP000243.1| Escherichia coli UTI89, complete genome 42 1.4
69gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 42 1.4
70emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid con... 42 1.4
71dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 42 1.4
72gb|AY016024.1| Takifugu rubripes alpha globin gene cluster, comp... 42 1.4
73dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.4
74gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 42 1.4
75dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 42 1.4
76gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 42 1.4
77gb|CP000036.1| Shigella boydii Sb227, complete genome 42 1.4
78gb|AC152958.1| Mus musculus 6 BAC RP23-301K21 (Roswell Park Canc... 40 5.7
79gb|AY016023.1| Sphoeroides nephelus alpha globin gene cluster, c... 40 5.7
80gb|AC115723.13| Mus musculus chromosome 5, clone RP23-17D18, com... 40 5.7
81ref|NM_023371.2| Mus musculus protein (peptidyl-prolyl cis/trans... 40 5.7
82emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 i... 40 5.7
83gb|AC126031.2| Mus musculus BAC clone RP24-84F17 from chromosome... 40 5.7
84emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete ch... 40 5.7
85ref|XM_808652.1| Trypanosoma cruzi strain CL Brener protein kina... 40 5.7
86gb|AC023248.20| Mus musculus chromosome 7, clone RP23-124B2, com... 40 5.7
87gb|AC144399.2| Oryctolagus cuniculus clone LBNL1-125D4, complete... 40 5.7
88emb|AL357563.12| Human DNA sequence from clone RP11-9G10 on chro... 40 5.7
89emb|AL353679.18| Human DNA sequence from clone RP3-418C23 on chr... 40 5.7
90gb|AC157990.4| Mus musculus chromosome 5, clone RP24-307I24, com... 40 5.7
91emb|AL008720.1|HS343C1 Human DNA sequence from clone CTA-343C1 o... 40 5.7
92gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatibl... 40 5.7
93gb|AY152835.1| Felis catus clone PAC g7 major histocompatiblity ... 40 5.7
94ref|XM_781644.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.7
95emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 b... 40 5.7
96emb|AL117528.1|HSM801052 Homo sapiens genomic DNA; cDNA DKFZp434... 40 5.7
97emb|BX510370.5| Zebrafish DNA sequence from clone DKEY-31M13 in ... 40 5.7
98dbj|AK150652.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 5.7
99gb|AC019031.7| Homo sapiens chromosome 8, clone RP11-563O19, com... 40 5.7
100ref|XM_686091.1| PREDICTED: Danio rerio similar to inositol 1,4,... 40 5.7
101gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-8... 40 5.7
102gb|AC157989.8| Mus musculus chromosome 5, clone RP24-230P10, com... 40 5.7
103dbj|AK003369.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 5.7
104dbj|AK036021.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 5.7
105dbj|AK054045.1| Mus musculus 2 days pregnant adult female oviduc... 40 5.7
106dbj|AK082013.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 5.7
107gb|AC120381.13| Mus musculus chromosome 5, clone RP24-266G11, co... 40 5.7
108gb|U00966.1|U00966 Lophopyrum elongatum salt-stress induced hydr... 40 5.7
109gb|AC078863.15|AC078863 Mus musculus BAC RP23-406N7 (Roswell Pa... 40 5.7
110gb|AC090023.20| Homo sapiens 12 BAC RP11-221N13 (Roswell Park Ca... 40 5.7
111gb|AE004493.1| Pseudomonas aeruginosa PAO1, section 54 of 529 of... 40 5.7
112gb|AC117440.5| Homo sapiens 3 BAC RP11-575C1 (Roswell Park Cance... 40 5.7
113emb|AL844207.4| Zebrafish DNA sequence from clone DKEY-166M19, c... 40 5.7
114emb|X58859.1|HVTHIOL Barley DNA with region homologous to thiol ... 40 5.7
115emb|AJ310995.1|HVU310995 Hordeum vulgare lt101.2 gene for putati... 40 5.7
116ref|XM_316287.2| Anopheles gambiae str. PEST ENSANGP00000020503 ... 40 5.7
117emb|CT963096.1| M.spretus DNA sequence from clone XX-CH35_391C2 ... 40 5.7
118emb|AL831768.9| Zebrafish DNA sequence from clone RP71-1O1 in li... 40 5.7
119gb|AC107709.12| Mus musculus chromosome 5, clone RP23-60E7, comp... 40 5.7
120gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 5.7
121emb|CT025666.5| Zebrafish DNA sequence from clone DKEY-218J1 in ... 40 5.7
122emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chr... 40 5.7
123emb|AL929186.7| Mouse DNA sequence from clone RP23-399K8 on chro... 40 5.7
124emb|AL732572.10| Mouse DNA sequence from clone RP23-32C16 on chr... 40 5.7
125emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chr... 40 5.7
126dbj|AP001293.1| Mus musculus genomic DNA, chromosome 7, clone:B1... 40 5.7
127dbj|AP001917.2| Mus musculus genomic DNA , chromosome 7, clone:B... 40 5.7

>ref|XM_479247.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 171

 Score =  268 bits (135), Expect = 1e-68
 Identities = 147/151 (97%)
 Strand = Plus / Minus

                                                                       
Query: 239 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 298
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ctacttggtgatgacccagacagcgtagatgatgccggggaggtagccgaagaaggtgag 112

                                                                       
Query: 299 cagcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcgg 358
           ||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 111 cagcaagcagatccagaactcaatcccgcagccgaacttgaagaagacgccgagcggcgg 52

                                          
Query: 359 caggatgatggcgaggatgatgtcgatgcag 389
           |||||||||||||||||||||||||||||||
Sbjct: 51  caggatgatggcgaggatgatgtcgatgcag 21



to top

>gb|AY554050.1| Oryza sativa (japonica cultivar-group) drought-induced hydrophobic
           protein (DRR1) mRNA, complete cds
          Length = 571

 Score =  268 bits (135), Expect = 1e-68
 Identities = 147/151 (97%)
 Strand = Plus / Minus

                                                                       
Query: 239 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 298
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ctacttggtgatgacccagacagcgtagatgatgccggggaggtagccgaagaaggtgag 214

                                                                       
Query: 299 cagcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcgg 358
           ||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 213 cagcaagcagatccagaactcaatcccgcagccgaacttgaagaagacgccgagcggcgg 154

                                          
Query: 359 caggatgatggcgaggatgatgtcgatgcag 389
           |||||||||||||||||||||||||||||||
Sbjct: 153 caggatgatggcgaggatgatgtcgatgcag 123



to top

>dbj|AK121089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065L15, full
           insert sequence
          Length = 636

 Score =  268 bits (135), Expect = 1e-68
 Identities = 147/151 (97%)
 Strand = Plus / Minus

                                                                       
Query: 239 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 298
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ctacttggtgatgacccagacagcgtagatgatgccggggaggtagccgaagaaggtgag 239

                                                                       
Query: 299 cagcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcgg 358
           ||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 238 cagcaagcagatccagaactcaatcccgcagccgaacttgaagaagacgccgagcggcgg 179

                                          
Query: 359 caggatgatggcgaggatgatgtcgatgcag 389
           |||||||||||||||||||||||||||||||
Sbjct: 178 caggatgatggcgaggatgatgtcgatgcag 148



to top

>gb|AY607689.1| Oryza sativa (japonica cultivar-group) low temperature-induced low
           molecular weight integral membrane protein LTI6a mRNA,
           complete cds
          Length = 616

 Score =  268 bits (135), Expect = 1e-68
 Identities = 147/151 (97%)
 Strand = Plus / Minus

                                                                       
Query: 239 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 298
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctacttggtgatgacccagacagcgtagatgatgccggggaggtagccgaagaaggtgag 224

                                                                       
Query: 299 cagcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcgg 358
           ||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 223 cagcaagcagatccagaactcaatcccgcagccgaacttgaagaagacgccgagcggcgg 164

                                          
Query: 359 caggatgatggcgaggatgatgtcgatgcag 389
           |||||||||||||||||||||||||||||||
Sbjct: 163 caggatgatggcgaggatgatgtcgatgcag 133



to top

>gb|AY823549.1| Pennisetum glaucum low temperature and salt responsive protein
           mRNA, complete cds
          Length = 565

 Score =  244 bits (123), Expect = 2e-61
 Identities = 150/159 (94%)
 Strand = Plus / Minus

                                                                       
Query: 239 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 298
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ctacttggtgatggcccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 249

                                                                       
Query: 299 cagcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcgg 358
            |  ||||||||||||||||| | ||||||| |||||||||||||||| |||||||||||
Sbjct: 248 gacgaggcagatccagaactcaaccccgcagccgaacttgaagaagaccccgagcggcgg 189

                                                  
Query: 359 caggatgatggcgaggatgatgtcgatgcagttggccgt 397
           ||||||||||||||||||||||||||||||||| |||||
Sbjct: 188 caggatgatggcgaggatgatgtcgatgcagttcgccgt 150



to top

>gb|AY103848.1| Zea mays PCO061754 mRNA sequence
          Length = 846

 Score =  234 bits (118), Expect = 2e-58
 Identities = 145/154 (94%)
 Strand = Plus / Minus

                                                                       
Query: 236 cggctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggt 295
           |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 312 cggctacttggtgatggcccagacggcgtagatgatgccggggaggtagccgaggaaggt 253

                                                                       
Query: 296 gagcagcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcgg 355
           ||| |  ||||||||||||||||| | ||||||| |||||||||||||||| ||||||||
Sbjct: 252 gaggataaggcagatccagaactcaaccccgcagccgaacttgaagaagaccccgagcgg 193

                                             
Query: 356 cggcaggatgatggcgaggatgatgtcgatgcag 389
           ||||||||||||||||||||||||||||||||||
Sbjct: 192 cggcaggatgatggcgaggatgatgtcgatgcag 159



to top

>gb|AY554051.1| Oryza sativa (japonica cultivar-group) drought-induced hydrophobic
           protein (DRR2) mRNA, complete cds
          Length = 547

 Score =  170 bits (86), Expect = 2e-39
 Identities = 140/158 (88%)
 Strand = Plus / Minus

                                                                       
Query: 240 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 299
           |||||||||||| |  ||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 287 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 228

                                                                       
Query: 300 agcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggc 359
           | ||||||||||||||||||   ||||||  ||||||||| |||||||||||| ||||| 
Sbjct: 227 aacaggcagatccagaactcatgcccgcatccgaacttgaggaagacgccgaggggcggg 168

                                                 
Query: 360 aggatgatggcgaggatgatgtcgatgcagttggccgt 397
           ||||||||||||| || ||||||||||||||| |||||
Sbjct: 167 aggatgatggcgatgaggatgtcgatgcagttcgccgt 130



to top

>gb|AF503583.2| Oryza sativa (indica cultivar-group) early drought induced protein
           (R1G1B) mRNA, complete cds
          Length = 649

 Score =  170 bits (86), Expect = 2e-39
 Identities = 140/158 (88%)
 Strand = Plus / Minus

                                                                       
Query: 240 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 299
           |||||||||||| |  ||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 312 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 253

                                                                       
Query: 300 agcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggc 359
           | ||||||||||||||||||   ||||||  ||||||||| |||||||||||| ||||| 
Sbjct: 252 aacaggcagatccagaactcatgcccgcatccgaacttgaggaagacgccgaggggcggg 193

                                                 
Query: 360 aggatgatggcgaggatgatgtcgatgcagttggccgt 397
           ||||||||||||| || ||||||||||||||| |||||
Sbjct: 192 aggatgatggcgatgaggatgtcgatgcagttcgccgt 155



to top

>dbj|AK119249.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G07, full
           insert sequence
          Length = 622

 Score =  170 bits (86), Expect = 2e-39
 Identities = 140/158 (88%)
 Strand = Plus / Minus

                                                                       
Query: 240 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 299
           |||||||||||| |  ||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 315 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 256

                                                                       
Query: 300 agcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggc 359
           | ||||||||||||||||||   ||||||  ||||||||| |||||||||||| ||||| 
Sbjct: 255 aacaggcagatccagaactcatgcccgcatccgaacttgaggaagacgccgaggggcggg 196

                                                 
Query: 360 aggatgatggcgaggatgatgtcgatgcagttggccgt 397
           ||||||||||||| || ||||||||||||||| |||||
Sbjct: 195 aggatgatggcgatgaggatgtcgatgcagttcgccgt 158



to top

>gb|AY607690.1| Oryza sativa (japonica cultivar-group) low temperature-induced low
           molecular weight integral membrane protein LTI6b mRNA,
           complete cds
          Length = 630

 Score =  170 bits (86), Expect = 2e-39
 Identities = 140/158 (88%)
 Strand = Plus / Minus

                                                                       
Query: 240 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 299
           |||||||||||| |  ||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 294 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 235

                                                                       
Query: 300 agcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggc 359
           | ||||||||||||||||||   ||||||  ||||||||| |||||||||||| ||||| 
Sbjct: 234 aacaggcagatccagaactcatgcccgcatccgaacttgaggaagacgccgaggggcggg 175

                                                 
Query: 360 aggatgatggcgaggatgatgtcgatgcagttggccgt 397
           ||||||||||||| || ||||||||||||||| |||||
Sbjct: 174 aggatgatggcgatgaggatgtcgatgcagttcgccgt 137



to top

>dbj|AB161676.1| Leymus chinensis AcPMP3-1 mRNA for plasma membrane protein 3,
           complete cds
          Length = 579

 Score =  163 bits (82), Expect = 6e-37
 Identities = 139/158 (87%)
 Strand = Plus / Minus

                                                                       
Query: 240 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 299
           |||||||||||| |  |||  ||||||||||| || |||| ||| |||| ||||||||||
Sbjct: 242 tacttggtgatggcgtagatagcgtagatgatacccgggatgtacccgaggaaggtgagc 183

                                                                       
Query: 300 agcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggc 359
           |  |||||||||||||||||   ||||||| ||||||||| |||||||||||| ||||| 
Sbjct: 182 aagaggcagatccagaactcatgcccgcagccgaacttgaggaagacgccgaggggcggg 123

                                                 
Query: 360 aggatgatggcgaggatgatgtcgatgcagttggccgt 397
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aggatgatggcgaggatgatgtcgatgcagttggccgt 85



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  145 bits (73), Expect = 1e-31
 Identities = 79/81 (97%)
 Strand = Plus / Minus

                                                                            
Query: 239      ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 298
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 26350505 ctacttggtgatgacccagacagcgtagatgatgccggggaggtagccgaagaaggtgag 26350446

                                     
Query: 299      cagcaggcagatccagaactc 319
                ||||| |||||||||||||||
Sbjct: 26350445 cagcaagcagatccagaactc 26350425



 Score =  125 bits (63), Expect = 1e-25
 Identities = 66/67 (98%)
 Strand = Plus / Minus

                                                                            
Query: 323      cccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtc 382
                ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26350306 cccgcagccgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtc 26350247

                       
Query: 383      gatgcag 389
                |||||||
Sbjct: 26350246 gatgcag 26350240



to top

>dbj|AP003749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1136_D11
          Length = 109399

 Score =  145 bits (73), Expect = 1e-31
 Identities = 79/81 (97%)
 Strand = Plus / Minus

                                                                        
Query: 239  ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 298
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4745 ctacttggtgatgacccagacagcgtagatgatgccggggaggtagccgaagaaggtgag 4686

                                 
Query: 299  cagcaggcagatccagaactc 319
            ||||| |||||||||||||||
Sbjct: 4685 cagcaagcagatccagaactc 4665



 Score =  125 bits (63), Expect = 1e-25
 Identities = 66/67 (98%)
 Strand = Plus / Minus

                                                                        
Query: 323  cccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtc 382
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4546 cccgcagccgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtc 4487

                   
Query: 383  gatgcag 389
            |||||||
Sbjct: 4486 gatgcag 4480



to top

>gb|AY105302.1| Zea mays PCO074610 mRNA sequence
          Length = 553

 Score =  141 bits (71), Expect = 2e-30
 Identities = 125/143 (87%)
 Strand = Plus / Minus

                                                                       
Query: 261 gcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactcg 320
           ||||||||||| |||||||| ||| ||| |||||||||||| ||||||| |||||| |||
Sbjct: 214 gcgtagatgatcccggggagataggcgaggaaggtgagcaggaggcagagccagaattcg 155

                                                                       
Query: 321 atcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatg 380
           | |  |||| ||||||||| |||||||||||| ||||| ||||||||||||| || ||||
Sbjct: 154 accttgcagccgaacttgaggaagacgccgagaggcgggaggatgatggcgatgaggatg 95

                                  
Query: 381 tcgatgcagttggccgtcccctc 403
           ||||||||||| ||||| |||||
Sbjct: 94  tcgatgcagttcgccgtgccctc 72



to top

>ref|NM_184595.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 195

 Score =  137 bits (69), Expect = 3e-29
 Identities = 108/121 (89%)
 Strand = Plus / Minus

                                                                       
Query: 252 acccagacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatc 311
           |||||||||||||||||||| || |||| |||||| ||||| |||||||  |||||||||
Sbjct: 179 acccagacggcgtagatgatccccgggaagtagcccaagaatgtgagcaagaggcagatc 120

                                                                       
Query: 312 cagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcg 371
           |||||||||||| ||||| ||| ||||| |||||||||||| || |||||||||||||||
Sbjct: 119 cagaactcgatctcgcagccgaccttgaggaagacgccgaggggaggcaggatgatggcg 60

            
Query: 372 a 372
           |
Sbjct: 59  a 59



to top

>ref|NM_183567.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1614

 Score =  131 bits (66), Expect = 2e-27
 Identities = 123/142 (86%)
 Strand = Plus / Minus

                                                                       
Query: 256 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 315
           |||| ||||||||||| || ||||| |||||||||||||||||||| || |||| |||||
Sbjct: 154 agaccgcgtagatgatccccgggagatagccgaagaaggtgagcagaagacagagccaga 95

                                                                       
Query: 316 actcgatcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcgagga 375
           |||| | |  |||  ||||||||| |||||||||||| || || ||||||||||||| ||
Sbjct: 94  actccaccttgcatccgaacttgaggaagacgccgagaggagggaggatgatggcgatga 35

                                 
Query: 376 tgatgtcgatgcagttggccgt 397
            |||||||||||||||||||||
Sbjct: 34  ggatgtcgatgcagttggccgt 13



to top

>dbj|AB161677.1| Leymus chinensis AcPMP3-2 mRNA for plasma membrane protein 3,
           complete cds
          Length = 513

 Score =  117 bits (59), Expect = 3e-23
 Identities = 131/155 (84%)
 Strand = Plus / Minus

                                                                       
Query: 240 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 299
           |||||||||||| |  |||  |||||||| || || |||| | | |||| ||||||||||
Sbjct: 245 tacttggtgatggcgtagatagcgtagataatacccgggatgaacccgaggaaggtgagc 186

                                                                       
Query: 300 agcaggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggc 359
           |  |||||||||||||||||   ||||||  ||||||||| |||||||||||| ||||| 
Sbjct: 185 aagaggcagatccagaactcatgcccgcatccgaacttgaggaagacgccgaggggcggg 126

                                              
Query: 360 aggatgatggcgaggatgatgtcgatgcagttggc 394
           ||||||||||||| |||||||||||||||| ||||
Sbjct: 125 aggatgatggcgatgatgatgtcgatgcaggtggc 91



to top

>gb|BT017793.1| Zea mays clone EL01N0504G08.c mRNA sequence
          Length = 472

 Score =  111 bits (56), Expect = 2e-21
 Identities = 122/144 (84%)
 Strand = Plus / Minus

                                                                       
Query: 260 ggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactc 319
           |||||| ||||||||||||| |||||||| ||||||||| || |||||||||||||||||
Sbjct: 233 ggcgtaaatgatgccggggatgtagccgaggaaggtgaggaggaggcagatccagaactc 174

                                                                       
Query: 320 gatcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgat 379
           |   |||||  || |||||| ||| || || ||||| ||||||||||||||||  | |||
Sbjct: 173 gtggccgcacccgtacttgaggaacacccccagcggaggcaggatgatggcgatcaggat 114

                                   
Query: 380 gtcgatgcagttggccgtcccctc 403
           ||| | ||||||||| ||||||||
Sbjct: 113 gtccacgcagttggcagtcccctc 90



to top

>gb|AY111401.1| Zea mays CL37957_1 mRNA sequence
          Length = 478

 Score =  109 bits (55), Expect = 7e-21
 Identities = 134/162 (82%)
 Strand = Plus / Plus

                                                                       
Query: 242 cttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagcag 301
           |||||||||| |  ||| |||||||||||||||||||| |||||||| ||||||||| ||
Sbjct: 234 cttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgaggag 293

                                                                       
Query: 302 caggcagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggcag 361
            ||||||||||||||||||   |||||  || |||||| ||| |     ||||| |||||
Sbjct: 294 gaggcagatccagaactcgtggccgcacccgtacttgaggaacannnnnagcggaggcag 353

                                                     
Query: 362 gatgatggcgaggatgatgtcgatgcagttggccgtcccctc 403
           |||||||||||  | |||||| | ||||||||| ||||||||
Sbjct: 354 gatgatggcgatcaggatgtccacgcagttggcagtcccctc 395



to top

>gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0069I13, complete sequence
          Length = 94252

 Score =  103 bits (52), Expect = 5e-19
 Identities = 73/80 (91%)
 Strand = Plus / Plus

                                                                         
Query: 240   tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 299
             |||||||||||| |  ||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 29011 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 29070

                                 
Query: 300   agcaggcagatccagaactc 319
             | ||||||||||||||||||
Sbjct: 29071 aacaggcagatccagaactc 29090



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                         
Query: 331   cgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagt 390
             ||||||||| |||||||||||| ||||| ||||||||||||| || ||||||||||||||
Sbjct: 29218 cgaacttgaggaagacgccgaggggcgggaggatgatggcgatgaggatgtcgatgcagt 29277

                    
Query: 391   tggccgt 397
             | |||||
Sbjct: 29278 tcgccgt 29284



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  103 bits (52), Expect = 5e-19
 Identities = 73/80 (91%)
 Strand = Plus / Plus

                                                                           
Query: 240     tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 299
               |||||||||||| |  ||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 2159782 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 2159841

                                   
Query: 300     agcaggcagatccagaactc 319
               | ||||||||||||||||||
Sbjct: 2159842 aacaggcagatccagaactc 2159861



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                           
Query: 331     cgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagt 390
               ||||||||| |||||||||||| ||||| ||||||||||||| || ||||||||||||||
Sbjct: 2159989 cgaacttgaggaagacgccgaggggcgggaggatgatggcgatgaggatgtcgatgcagt 2160048

                      
Query: 391     tggccgt 397
               | |||||
Sbjct: 2160049 tcgccgt 2160055



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                          
Query: 261     gcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactc 319
               ||||||||||||||||| | ||| || | || |||||||||||||  ||||||||||||
Sbjct: 1186261 gcgtagatgatgccgggtaagtatcccaggatggtgagcagcagggcgatccagaactc 1186319



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 341     gaagacgccgagcggcggcaggatgatggc 370
               ||||||||||||||||||||| | ||||||
Sbjct: 1186413 gaagacgccgagcggcggcagcaggatggc 1186442



to top

>dbj|AK070577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023057O07, full
           insert sequence
          Length = 1507

 Score =  103 bits (52), Expect = 5e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                       
Query: 240 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 299
           |||||||||||| |  ||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 437 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 378

                               
Query: 300 agcaggcagatccagaactc 319
           | ||||||||||||||||||
Sbjct: 377 aacaggcagatccagaactc 358



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                       
Query: 331 cgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagt 390
           ||||||||| |||||||||||| ||||| ||||||||||||| || ||||||||||||||
Sbjct: 230 cgaacttgaggaagacgccgaggggcgggaggatgatggcgatgaggatgtcgatgcagt 171

                  
Query: 391 tggccgt 397
           | |||||
Sbjct: 170 tcgccgt 164



to top

>dbj|AK099873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G21, full
           insert sequence
          Length = 1039

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                       
Query: 240 tacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagc 299
           |||||||||||| |  ||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 440 tacttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgagc 381

                               
Query: 300 agcaggcagatccagaactc 319
           | || |||||||||||||||
Sbjct: 380 aacaagcagatccagaactc 361



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                       
Query: 331 cgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagt 390
           ||||||||| |||||||||||| ||||| ||||||||||||| || ||||||||||||||
Sbjct: 233 cgaacttgaggaagacgccgaggggcgggaggatgatggcgatgaggatgtcgatgcagt 174

                  
Query: 391 tggccgt 397
           | |||||
Sbjct: 173 tcgccgt 167



to top

>gb|DQ078765.1| Zea mays clone Zmcoi6.8 cold-inducible unknown mRNA
          Length = 220

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                       
Query: 242 cttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgagcag 301
           |||||||||| |  ||| |||||||||||||||||||| |||||||| ||||||||| ||
Sbjct: 92  cttggtgatggcgtagatggcgtagatgatgccggggatgtagccgaggaaggtgaggag 33

                              
Query: 302 caggcagatccagaactcg 320
            ||||||||||||||||||
Sbjct: 32  gaggcagatccagaactcg 14



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                            
Query: 252      acccagacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatc 311
                |||||||||||||||||||| || |||| |||||| ||||| |||||||  |||||||||
Sbjct: 14387399 acccagacggcgtagatgatccccgggaagtagcccaagaatgtgagcaagaggcagatc 14387458

                            
Query: 312      cagaactcgatc 323
                ||||||||||||
Sbjct: 14387459 cagaactcgatc 14387470



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 325      cgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcga 372
                ||||| ||| ||||| |||||||||||| || ||||||||||||||||
Sbjct: 14387603 cgcagccgaccttgaggaagacgccgaggggaggcaggatgatggcga 14387650



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                  
Query: 341     gaagacgccgagcggcggcaggatgatggcgagga 375
               ||||||||||| ||||||||||| |||||| ||||
Sbjct: 9872215 gaagacgccgaccggcggcaggaagatggctagga 9872249



to top

>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
              sequence
          Length = 158714

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                          
Query: 252    acccagacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatc 311
              |||||||||||||||||||| || |||| |||||| ||||| |||||||  |||||||||
Sbjct: 136628 acccagacggcgtagatgatccccgggaagtagcccaagaatgtgagcaagaggcagatc 136687

                          
Query: 312    cagaactcgatc 323
              ||||||||||||
Sbjct: 136688 cagaactcgatc 136699



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                              
Query: 325    cgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcga 372
              ||||| ||| ||||| |||||||||||| || ||||||||||||||||
Sbjct: 136832 cgcagccgaccttgaggaagacgccgaggggaggcaggatgatggcga 136879



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                            
Query: 252      acccagacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatc 311
                |||||||||||||||||||| || |||| |||||| ||||| |||||||  |||||||||
Sbjct: 14382374 acccagacggcgtagatgatccccgggaagtagcccaagaatgtgagcaagaggcagatc 14382433

                            
Query: 312      cagaactcgatc 323
                ||||||||||||
Sbjct: 14382434 cagaactcgatc 14382445



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 325      cgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcga 372
                ||||| ||| ||||| |||||||||||| || ||||||||||||||||
Sbjct: 14382578 cgcagccgaccttgaggaagacgccgaggggaggcaggatgatggcga 14382625



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                  
Query: 341     gaagacgccgagcggcggcaggatgatggcgagga 375
               ||||||||||| ||||||||||| |||||| ||||
Sbjct: 9870336 gaagacgccgaccggcggcaggaagatggctagga 9870370



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                            
Query: 331      cgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagt 390
                ||||||||| |||||||||||| || || ||||||||||||| || ||||||||||||||
Sbjct: 10331710 cgaacttgaggaagacgccgagaggagggaggatgatggcgatgaggatgtcgatgcagt 10331651

                       
Query: 391      tggccgt 397
                |||||||
Sbjct: 10331650 tggccgt 10331644



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                            
Query: 239      ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 298
                ||||||||||||  |  |||| ||||||||||| || ||||| |||||||||||||||||
Sbjct: 10331955 ctacttggtgatagcatagaccgcgtagatgatccccgggagatagccgaagaaggtgag 10331896

                                     
Query: 299      cagcaggcagatccagaactc 319
                ||| || |||| |||||||||
Sbjct: 10331895 cagaagacagagccagaactc 10331875



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                            
Query: 260      ggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactc 319
                ||||||||||||||| || || ||||||| | ||||||| || |||||||||||||||||
Sbjct: 10317926 ggcgtagatgatgcccggaagatagccgaggcaggtgaggagaaggcagatccagaactc 10317867



to top

>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0511C01
          Length = 170402

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                         
Query: 331   cgaacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagt 390
             ||||||||| |||||||||||| || || ||||||||||||| || ||||||||||||||
Sbjct: 38430 cgaacttgaggaagacgccgagaggagggaggatgatggcgatgaggatgtcgatgcagt 38371

                    
Query: 391   tggccgt 397
             |||||||
Sbjct: 38370 tggccgt 38364



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                         
Query: 239   ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 298
             ||||||||||||  |  |||| ||||||||||| || ||||| |||||||||||||||||
Sbjct: 38675 ctacttggtgatagcatagaccgcgtagatgatccccgggagatagccgaagaaggtgag 38616

                                  
Query: 299   cagcaggcagatccagaactc 319
             ||| || |||| |||||||||
Sbjct: 38615 cagaagacagagccagaactc 38595



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                         
Query: 260   ggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactc 319
             ||||||||||||||| || || ||||||| | ||||||| || |||||||||||||||||
Sbjct: 24646 ggcgtagatgatgcccggaagatagccgaggcaggtgaggagaaggcagatccagaactc 24587



to top

>gb|AY177890.1| Zea mays clone BAC ZMBBb_95H21 ABA-induced gene, partial sequence
          Length = 2248

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                        
Query: 256  agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 315
            ||||||||||||||||||| |||| ||| || | || |||||||||||||||||||||||
Sbjct: 1235 agacggcgtagatgatgcccgggatgtatcccaggatggtgagcagcaggcagatccaga 1176

                
Query: 316  actc 319
            ||||
Sbjct: 1175 actc 1172



to top

>gb|AY107179.1| Zea mays PCO146860 mRNA sequence
          Length = 698

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                       
Query: 256 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 315
           ||||||||||||||||||| |||| ||| || | || |||||||||||||||||||||||
Sbjct: 302 agacggcgtagatgatgcccgggatgtatcccaggatggtgagcagcaggcagatccaga 243

               
Query: 316 actc 319
           ||||
Sbjct: 242 actc 239



to top

>gb|AY131234.1| Triticum aestivum putative low temperature and salt responsive
           protein mRNA, partial cds
          Length = 207

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                       
Query: 259 cggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaact 318
           ||||||||| || ||||||||||||||||| || ||||||||||| || |||||||||||
Sbjct: 139 cggcgtagaggacgccggggaggtagccgaggatggtgagcagcacgctgatccagaact 80

            
Query: 319 c 319
           |
Sbjct: 79  c 79



to top

>dbj|AK058343.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-D10, full
           insert sequence
          Length = 590

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 ctacttggtgatgacccagacggcgtagatgatgccggggaggtagccgaagaaggtgag 298
           ||||||||||||  |  |||| ||||||||||| || ||||| |||||||||||||||||
Sbjct: 94  ctacttggtgatagcatagaccgcgtagatgatccccgggagatagccgaagaaggtgag 35

                                
Query: 299 cagcaggcagatccagaactc 319
           ||| || |||| |||||||||
Sbjct: 34  cagaagacagagccagaactc 14



to top

>gb|BT019258.1| Zea mays clone Contig931.F mRNA sequence
          Length = 610

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 95/115 (82%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                       
Query: 261 gcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactcg 320
           ||||||||||| ||||||| |||||| | ||  ||||||||||||||||| |||||||| 
Sbjct: 288 gcgtagatgattccggggacgtagccaaggattgtgagcagcaggcagatgcagaactct 347

                                                                  
Query: 321 a---tcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcga 372
           |   | | |||| ||||   || |||||||||||| ||||| |||||||||||||
Sbjct: 348 attctgcagcagccgaatcggaggaagacgccgaggggcgggaggatgatggcga 402



to top

>gb|AY108684.1| Zea mays PCO116945 mRNA sequence
          Length = 626

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 95/115 (82%), Gaps = 3/115 (2%)
 Strand = Plus / Minus

                                                                       
Query: 261 gcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactcg 320
           ||||||||||| ||||||| |||||| | ||  ||||||||||||||||| |||||||| 
Sbjct: 282 gcgtagatgattccggggacgtagccaaggattgtgagcagcaggcagatgcagaactct 223

                                                                  
Query: 321 a---tcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggcga 372
           |   | | |||| ||||   || |||||||||||| ||||| |||||||||||||
Sbjct: 222 attctgcagcagccgaatcggaggaagacgccgaggggcgggaggatgatggcga 168



to top

>ref|NM_183563.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1110

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 260 ggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactc 319
           ||||||||||||||| || || ||||||| | ||||||| || |||||||||||||||||
Sbjct: 25  ggcgtagatgatgcccggaagatagccgaggcaggtgaggagaaggcagatccagaactc 84



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                           
Query: 256     agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 315
               |||||||||||| || |||||||||||| |||| || ||||||||||| ||  |||||||
Sbjct: 4275604 agacggcgtagaggacgccggggaggtacccgaggatggtgagcagcacgctaatccaga 4275663

                   
Query: 316     actc 319
               ||||
Sbjct: 4275664 actc 4275667



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 251      gacccagacggcgtagatgatgccggggaggtag 284
                ||||||||||| ||||| ||||||||||| ||||
Sbjct: 26293474 gacccagacggagtagacgatgccggggacgtag 26293441



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 338      gaagaagacgccgagcggcgg 358
                |||||||||||||||||||||
Sbjct: 26293278 gaagaagacgccgagcggcgg 26293258



to top

>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0554A06
          Length = 165311

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                          
Query: 256    agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 315
              |||||||||||| || |||||||||||| |||| || ||||||||||| ||  |||||||
Sbjct: 120825 agacggcgtagaggacgccggggaggtacccgaggatggtgagcagcacgctaatccaga 120884

                  
Query: 316    actc 319
              ||||
Sbjct: 120885 actc 120888



to top

>dbj|AK121018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049B21, full
           insert sequence
          Length = 577

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 256 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 315
           |||||||||||| || |||||||||||| |||| || ||||||||||| ||  |||||||
Sbjct: 214 agacggcgtagaggacgccggggaggtacccgaggatggtgagcagcacgctaatccaga 155

               
Query: 316 actc 319
           ||||
Sbjct: 154 actc 151



to top

>ref|XM_475521.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 165

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 261 gcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactcg 320
           ||||||||||||||||| | ||| || | || |||||||||||||  |||||||||||| 
Sbjct: 143 gcgtagatgatgccgggtaagtatcccaggatggtgagcagcagggcgatccagaactcc 84

                                                             
Query: 321 atcccgcaggcgaacttgaagaagacgccgagcggcggcaggatgatggc 370
           || |||  | || |   || ||||||||||||||||||||| | ||||||
Sbjct: 83  atgccgatgccgtagcggaggaagacgccgagcggcggcagcaggatggc 34



to top

>gb|AF220491.1|AF220491 Fragaria x ananassa O-methyltransferase (omt1) mRNA, complete cds
          Length = 1876

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 70/84 (83%)
 Strand = Plus / Minus

                                                                        
Query: 306  cagatccagaactcgatcccgcaggcgaacttgaagaagacgccgagcggcggcaggatg 365
            |||||||||||||| | ||||||| | ||| ||| |||||| || || || |||| || |
Sbjct: 1516 cagatccagaactccaccccgcagccaaacctgaggaagaccccaagaggaggcaagagg 1457

                                    
Query: 366  atggcgaggatgatgtcgatgcag 389
            ||||||| ||||||||||| ||||
Sbjct: 1456 atggcgatgatgatgtcgacgcag 1433



to top

>gb|AY823550.1| Pennisetum glaucum low temperature and salt responsive protein
           mRNA, complete cds
          Length = 520

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 341 gaagacgccgagcggcggcaggatgatggcgagga 375
           |||||||||||||||||| |||| |||||||||||
Sbjct: 119 gaagacgccgagcggcgggaggacgatggcgagga 85



to top

>dbj|AK062410.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-E12, full
           insert sequence
          Length = 620

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 98/121 (80%), Gaps = 3/121 (2%)
 Strand = Plus / Minus

                                                                       
Query: 256 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 315
           |||| |||||||||||||| ||||  ||||| | || |||||| |||| |||||| ||||
Sbjct: 211 agactgcgtagatgatgccagggacatagccaaggatggtgagaagcaagcagatgcaga 152

                                                                       
Query: 316 actcgatcccgcagg---cgaacttgaagaagacgccgagcggcggcaggatgatggcga 372
           |||| || | ||||    ||||   || |||||||||||| ||||| |||||||||||||
Sbjct: 151 actccatgctgcagcatccgaagcggaggaagacgccgaggggcgggaggatgatggcga 92

            
Query: 373 g 373
           |
Sbjct: 91  g 91



to top

>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02,
             complete sequence
          Length = 90509

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 261   gcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccagaactc 319
             ||||||||||||||||| | ||| || | || |||||||||||||  ||||||||||||
Sbjct: 36547 gcgtagatgatgccgggtaagtatcccaggatggtgagcagcagggcgatccagaactc 36605



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 341   gaagacgccgagcggcggcaggatgatggc 370
             ||||||||||||||||||||| | ||||||
Sbjct: 36699 gaagacgccgagcggcggcagcaggatggc 36728



to top

>dbj|AB030211.1| Oryza sativa osr8 mRNA for hydrophobic polypeptide, complete cds
          Length = 740

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 98/121 (80%), Gaps = 3/121 (2%)
 Strand = Plus / Minus

                                                                       
Query: 256 agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 315
           |||| |||||||||||||| ||||  ||||| | || |||||| |||| |||||| ||||
Sbjct: 337 agactgcgtagatgatgccagggacatagccaaggatggtgagaagcaagcagatgcaga 278

                                                                       
Query: 316 actcgatcccgcagg---cgaacttgaagaagacgccgagcggcggcaggatgatggcga 372
           |||| || | ||||    ||||   || |||||||||||| ||||| |||||||||||||
Sbjct: 277 actccatgctgcagcatccgaagcggaggaagacgccgaggggcgggaggatgatggcga 218

            
Query: 373 g 373
           |
Sbjct: 217 g 217



to top

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                             
Query: 351     agcggcggcaggatgatggcgaggatgatg 380
               |||||||||||||||||||||| |||||||
Sbjct: 5424414 agcggcggcaggatgatggcgatgatgatg 5424443



to top

>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0035B22, complete sequence
          Length = 155788

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 341   gaagacgccgagcggcggcaggatgatggcgag 373
             |||||||||||| ||||| ||||||||||||||
Sbjct: 85876 gaagacgccgaggggcgggaggatgatggcgag 85844



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                         
Query: 256   agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 315
             |||| |||||||||||||| ||||  ||||| | || |||||| |||| |||||| ||||
Sbjct: 86840 agactgcgtagatgatgccagggacatagccaaggatggtgagaagcaagcagatgcaga 86781

                 
Query: 316   actc 319
             ||||
Sbjct: 86780 actc 86777



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 341      gaagacgccgagcggcggcaggatgatggcgag 373
                |||||||||||| ||||| ||||||||||||||
Sbjct: 21880442 gaagacgccgaggggcgggaggatgatggcgag 21880410



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                            
Query: 256      agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 315
                |||| |||||||||||||| ||||  ||||| | || |||||| |||| |||||| ||||
Sbjct: 21881406 agactgcgtagatgatgccagggacatagccaaggatggtgagaagcaagcagatgcaga 21881347

                    
Query: 316      actc 319
                ||||
Sbjct: 21881346 actc 21881343



to top

>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1065_E04
          Length = 115865

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 341   gaagacgccgagcggcggcaggatgatggcgag 373
             |||||||||||| ||||| ||||||||||||||
Sbjct: 11159 gaagacgccgaggggcgggaggatgatggcgag 11127



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                         
Query: 256   agacggcgtagatgatgccggggaggtagccgaagaaggtgagcagcaggcagatccaga 315
             |||| |||||||||||||| ||||  ||||| | || |||||| |||| |||||| ||||
Sbjct: 12123 agactgcgtagatgatgccagggacatagccaaggatggtgagaagcaagcagatgcaga 12064

                 
Query: 316   actc 319
             ||||
Sbjct: 12063 actc 12060



to top

>dbj|AB221353.1| Triticum aestivum wpi6 gene for plasma membrane protein, complete
           cds
          Length = 596

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 341 gaagacgccgagcggcggcaggatgatggcgaggat 376
           |||||||||||  || ||||||||||||||||||||
Sbjct: 134 gaagacgccgacgggaggcaggatgatggcgaggat 99



to top

>dbj|AB030210.1| Triticum aestivum wpi6 mRNA for hydrophobic polypeptide, complete
           cds
          Length = 507

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 341 gaagacgccgagcggcggcaggatgatggcgaggat 376
           |||||||||||  || ||||||||||||||||||||
Sbjct: 112 gaagacgccgacgggaggcaggatgatggcgaggat 77



to top

>emb|AJ310994.1|HVU310994 Hordeum vulgare lt101.1 gene for putative membrane protein
          Length = 2288

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 341  gaagacgccgagcggcggcaggatgatggcgaggat 376
            ||||||||||| ||| ||||| ||||||||||||||
Sbjct: 1474 gaagacgccgaccggtggcagaatgatggcgaggat 1439



to top

>emb|Z25537.1|HVBLT101 H.vulgare blt101 mRNA
          Length = 521

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 341 gaagacgccgagcggcggcaggatgatggcgaggat 376
           ||||||||||| ||| ||||| ||||||||||||||
Sbjct: 109 gaagacgccgaccggtggcagaatgatggcgaggat 74



to top

>dbj|AP006122.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT16D13, TM0206b,
             complete sequence
          Length = 73101

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                         
Query: 333   aacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgcagttg 392
             ||||||| |||||| ||||| || || |||| ||||||||||| |||||| ||| |||||
Sbjct: 39619 aacttgaggaagaccccgagaggagggaggaggatggcgaggaggatgtcaatgaagttg 39678



to top

>ref|XM_470667.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 165

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 341 gaagacgccgagcggcggcaggatgatggcgagga 375
           ||||||||||| ||||||||||| |||||| ||||
Sbjct: 63  gaagacgccgaccggcggcaggaagatggctagga 29



to top

>gb|AY177891.1| Sorghum bicolor clone BAC 8070 ABA-induced gene, partial sequence
          Length = 3374

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 341  gaagacgccgagcggcggcaggatgatggcgagga 375
            ||||||||||| |||||| |||| |||||||||||
Sbjct: 2055 gaagacgccgaccggcgggaggaagatggcgagga 2021



to top

>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0022M22, from chromosome 3, complete sequence
          Length = 124166

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 341   gaagacgccgagcggcggcaggatgatggcgagga 375
             ||||||||||| ||||||||||| |||||| ||||
Sbjct: 34604 gaagacgccgaccggcggcaggaagatggctagga 34638



to top

>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0013D02, complete sequence
          Length = 131883

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 341  gaagacgccgagcggcggcaggatgatggcgagga 375
            ||||||||||| ||||||||||| |||||| ||||
Sbjct: 2282 gaagacgccgaccggcggcaggaagatggctagga 2248



to top

>dbj|AK070872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023071K01, full
           insert sequence
          Length = 488

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 341 gaagacgccgagcggcggcaggatgatggcgagga 375
           ||||||||||| ||||||||||| |||||| ||||
Sbjct: 158 gaagacgccgaccggcggcaggaagatggctagga 124



to top

>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0453H04
          Length = 175047

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 251    gacccagacggcgtagatgatgccggggaggtag 284
              ||||||||||| ||||| ||||||||||| ||||
Sbjct: 158014 gacccagacggagtagacgatgccggggacgtag 157981



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 338    gaagaagacgccgagcggcgg 358
              |||||||||||||||||||||
Sbjct: 157818 gaagaagacgccgagcggcgg 157798



to top

>dbj|AK108564.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C08, full
           insert sequence
          Length = 850

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 251 gacccagacggcgtagatgatgccggggaggtag 284
           ||||||||||| ||||| ||||||||||| ||||
Sbjct: 325 gacccagacggagtagacgatgccggggacgtag 292



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 338 gaagaagacgccgagcggcgg 358
           |||||||||||||||||||||
Sbjct: 235 gaagaagacgccgagcggcgg 215



to top

>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 402    tcgtccgccatcttccttcctc 423
              ||||||||||||||||||||||
Sbjct: 609927 tcgtccgccatcttccttcctc 609948



to top

>gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, complete sequence
          Length = 195273

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 213    agagacaagcaggcaggcagg 233
              |||||||||||||||||||||
Sbjct: 117246 agagacaagcaggcaggcagg 117226



to top

>ref|XM_959093.1| Neurospora crassa OR74A hypothetical protein (NCU03137.1) partial
            mRNA
          Length = 2619

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 360  aggatgatggcgaggatgatg 380
            |||||||||||||||||||||
Sbjct: 2054 aggatgatggcgaggatgatg 2074



to top

>ref|XM_330572.1| Neurospora crassa OR74A hypothetical protein (NCU03137.1) partial
            mRNA
          Length = 2619

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 360  aggatgatggcgaggatgatg 380
            |||||||||||||||||||||
Sbjct: 2054 aggatgatggcgaggatgatg 2074



to top

>ref|XM_809702.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509611.60) partial mRNA
          Length = 516

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 101 gcaagaacaacaaacagatgtacaa 125
           |||||||||| ||||||||||||||
Sbjct: 454 gcaagaacaagaaacagatgtacaa 430



to top

>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 345     acgccgagcggcggcaggatgatgg 369
               ||||||||||||||||| |||||||
Sbjct: 3075650 acgccgagcggcggcagaatgatgg 3075674



to top

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 345     acgccgagcggcggcaggatgatgg 369
               ||||||||||||||||| |||||||
Sbjct: 2951838 acgccgagcggcggcagaatgatgg 2951862



to top

>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 345     acgccgagcggcggcaggatgatgg 369
               ||||||||||||||||| |||||||
Sbjct: 2795001 acgccgagcggcggcagaatgatgg 2795025



to top

>emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid contig 5C2
          Length = 98769

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 360   aggatgatggcgaggatgatg 380
             |||||||||||||||||||||
Sbjct: 43652 aggatgatggcgaggatgatg 43632



to top

>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 345     acgccgagcggcggcaggatgatgg 369
               ||||||||||||||||| |||||||
Sbjct: 2795635 acgccgagcggcggcagaatgatgg 2795659



to top

>gb|AY016024.1| Takifugu rubripes alpha globin gene cluster, complete sequence
          Length = 35793

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 359   caggatgatggcgaggatgatgtcg 383
             ||||||| |||||||||||||||||
Sbjct: 28425 caggatggtggcgaggatgatgtcg 28449



to top

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 362    gatgatggcgaggatgatgtc 382
              |||||||||||||||||||||
Sbjct: 528321 gatgatggcgaggatgatgtc 528301



to top

>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 345     acgccgagcggcggcaggatgatgg 369
               ||||||||||||||||| |||||||
Sbjct: 3586456 acgccgagcggcggcagaatgatgg 3586480



to top

>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 345     acgccgagcggcggcaggatgatgg 369
               ||||||||||||||||| |||||||
Sbjct: 3519166 acgccgagcggcggcagaatgatgg 3519190



to top

>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 345     acgccgagcggcggcaggatgatgg 369
               ||||||||||||||||| |||||||
Sbjct: 2645103 acgccgagcggcggcagaatgatgg 2645127



to top

>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 345     acgccgagcggcggcaggatgatgg 369
               ||||||||||||||||| |||||||
Sbjct: 2857327 acgccgagcggcggcagaatgatgg 2857303



to top

>gb|AC152958.1| Mus musculus 6 BAC RP23-301K21 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 182995

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   tagagacaagcaggcaggca 231
             ||||||||||||||||||||
Sbjct: 85958 tagagacaagcaggcaggca 85939



to top

>gb|AY016023.1| Sphoeroides nephelus alpha globin gene cluster, complete sequence
          Length = 167215

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 359   caggatgatggcgaggatgatgtc 382
             ||||||| ||||||||||||||||
Sbjct: 96013 caggatggtggcgaggatgatgtc 96036



to top

>gb|AC115723.13| Mus musculus chromosome 5, clone RP23-17D18, complete sequence
          Length = 206470

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    tacactggggaaggtgacag 77
             ||||||||||||||||||||
Sbjct: 28800 tacactggggaaggtgacag 28819



to top

>ref|NM_023371.2| Mus musculus protein (peptidyl-prolyl cis/trans isomerase)
           NIMA-interacting 1 (Pin1), mRNA
          Length = 3810

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 400 cctcgtccgccatcttccttcctc 423
           |||||||||||||||||| |||||
Sbjct: 24  cctcgtccgccatcttccctcctc 1



to top

>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11,
             complete sequence
          Length = 198600

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 360   aggatgatggcgaggatgatgtcgatgc 387
             ||||||| ||||| ||||||||||||||
Sbjct: 80007 aggatgagggcgatgatgatgtcgatgc 79980



to top

>gb|AC126031.2| Mus musculus BAC clone RP24-84F17 from chromosome 19, complete sequence
          Length = 217220

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   agagacaagcaggcaggcag 232
             ||||||||||||||||||||
Sbjct: 73710 agagacaagcaggcaggcag 73691



to top

>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12
          Length = 273785

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 347    gccgagcggcggcaggatga 366
              ||||||||||||||||||||
Sbjct: 149058 gccgagcggcggcaggatga 149039



to top

>ref|XM_808652.1| Trypanosoma cruzi strain CL Brener protein kinase
            (Tc00.1047053503955.100) partial mRNA
          Length = 4944

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 362  gatgatggcgaggatgatgt 381
            ||||||||||||||||||||
Sbjct: 4366 gatgatggcgaggatgatgt 4385



to top

>gb|AC023248.20| Mus musculus chromosome 7, clone RP23-124B2, complete sequence
          Length = 211123

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    caggaggagaggagtctaat 94
             ||||||||||||||||||||
Sbjct: 86355 caggaggagaggagtctaat 86374



to top

>gb|AC144399.2| Oryctolagus cuniculus clone LBNL1-125D4, complete sequence
          Length = 191541

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     tggatggattatggatacac 56
              ||||||||||||||||||||
Sbjct: 106298 tggatggattatggatacac 106317



to top

>emb|AL357563.12| Human DNA sequence from clone RP11-9G10 on chromosome 6 Contains a
             novel FLJ14668 containing pseudogene, complete sequence
          Length = 70644

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    aggtgacaggaggagaggag 88
             ||||||||||||||||||||
Sbjct: 10948 aggtgacaggaggagaggag 10929



to top

>emb|AL353679.18| Human DNA sequence from clone RP3-418C23 on chromosome 6 Contains the
             5'end of a novel gene, a novel gene and a CpG island,
             complete sequence
          Length = 100111

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 211   ctagagacaagcaggcaggcaggg 234
             ||||||| ||||||||||||||||
Sbjct: 40660 ctagagataagcaggcaggcaggg 40637



to top

>gb|AC157990.4| Mus musculus chromosome 5, clone RP24-307I24, complete sequence
          Length = 153860

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    acaaacggaacaagttggcc 201
              ||||||||||||||||||||
Sbjct: 126748 acaaacggaacaagttggcc 126729



to top

>emb|AL008720.1|HS343C1 Human DNA sequence from clone CTA-343C1 on chromosome 22, complete
             sequence
          Length = 198570

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   gcaggcaggcaggggcggct 240
             ||||||||||||||||||||
Sbjct: 87215 gcaggcaggcaggggcggct 87196



to top

>gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatiblity complex classical
             class II region, partial sequence
          Length = 130898

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    aagcaagaacaacaaacaga 118
             ||||||||||||||||||||
Sbjct: 23283 aagcaagaacaacaaacaga 23302



to top

>gb|AY152835.1| Felis catus clone PAC g7 major histocompatiblity complex classical
             class II region, partial sequence
          Length = 77680

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    aagcaagaacaacaaacaga 118
             ||||||||||||||||||||
Sbjct: 45240 aagcaagaacaacaaacaga 45259



to top

>ref|XM_781644.1| PREDICTED: Strongylocentrotus purpuratus similar to NADPH oxidase, EF
            hand calcium-binding domain 5 (LOC581656), mRNA
          Length = 2703

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 363  atgatggcgaggatgatgtc 382
            ||||||||||||||||||||
Sbjct: 1313 atgatggcgaggatgatgtc 1294



to top

>emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 bp, chromosome 7
          Length = 281000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     caggaggagaggagtctaat 94
              ||||||||||||||||||||
Sbjct: 277751 caggaggagaggagtctaat 277770



to top

>emb|AL117528.1|HSM801052 Homo sapiens genomic DNA; cDNA DKFZp434P2450 (from clone
           DKFZp434P2450)
          Length = 2266

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 211 ctagagacaagcaggcaggcaggg 234
           ||||||| ||||||||||||||||
Sbjct: 635 ctagagataagcaggcaggcaggg 612



to top

>emb|BX510370.5| Zebrafish DNA sequence from clone DKEY-31M13 in linkage group 5,
            complete sequence
          Length = 112786

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 99   aagcaagaacaacaaacagatgtacaacagca 130
            |||||||||||||||||| || ||||| ||||
Sbjct: 1653 aagcaagaacaacaaacaaatctacaaaagca 1684



to top

>dbj|AK150652.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830013D09 product:protein
           (peptidyl-prolyl cis/trans isomerase) NIMA-interacting
           1, full insert sequence
          Length = 915

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 400 cctcgtccgccatcttccttcctc 423
           |||||||||||||||||| |||||
Sbjct: 24  cctcgtccgccatcttccctcctc 1



to top

>gb|AC019031.7| Homo sapiens chromosome 8, clone RP11-563O19, complete sequence
          Length = 157076

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   gaagaaggtgagcagcaggc 306
             ||||||||||||||||||||
Sbjct: 77472 gaagaaggtgagcagcaggc 77453



to top

>ref|XM_686091.1| PREDICTED: Danio rerio similar to inositol 1,4,5-triphosphate
            receptor, type 1 (LOC562715), mRNA
          Length = 1521

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 360  aggatgatggcgaggatgatgtcgatgc 387
            ||||||| ||||| ||||||||||||||
Sbjct: 1028 aggatgagggcgatgatgatgtcgatgc 1001



to top

>gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-85d15, complete
             sequence
          Length = 127331

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 333   aacttgaagaagacgccgagcggcggcaggatgatggcgaggatgatgtcgatgca 388
             ||||||| |||||| ||||| || || ||||||||||| |  ||||| ||||||||
Sbjct: 96902 aacttgaggaagacaccgagaggagggaggatgatggcaacaatgatatcgatgca 96847



to top

>gb|AC157989.8| Mus musculus chromosome 5, clone RP24-230P10, complete sequence
          Length = 164538

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    atacacatacactggggaag 70
             ||||||||||||||||||||
Sbjct: 66956 atacacatacactggggaag 66975



to top

>dbj|AK003369.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110003K11 product:protein
           (peptidyl-prolyl cis/trans isomerase) NIMA-interacting
           1, full insert sequence
          Length = 914

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 400 cctcgtccgccatcttccttcctc 423
           |||||||||||||||||| |||||
Sbjct: 24  cctcgtccgccatcttccctcctc 1



to top

>dbj|AK036021.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630027M07 product:RIKEN cDNA
            5730421E18 gene, full insert sequence
          Length = 1507

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   aagcaagaacaacaaacaga 118
            ||||||||||||||||||||
Sbjct: 1423 aagcaagaacaacaaacaga 1404



to top

>dbj|AK054045.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN
           full-length enriched library, clone:E230014K07
           product:protein (peptidyl-prolyl cis/trans isomerase)
           NIMA-interacting 1, full insert sequence
          Length = 3810

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 400 cctcgtccgccatcttccttcctc 423
           |||||||||||||||||| |||||
Sbjct: 24  cctcgtccgccatcttccctcctc 1



to top

>dbj|AK082013.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130094I07 product:RIKEN cDNA 5730421E18
            gene, full insert sequence
          Length = 2601

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   aagcaagaacaacaaacaga 118
            ||||||||||||||||||||
Sbjct: 1434 aagcaagaacaacaaacaga 1415



to top

>gb|AC120381.13| Mus musculus chromosome 5, clone RP24-266G11, complete sequence
          Length = 166871

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     tacactggggaaggtgacag 77
              ||||||||||||||||||||
Sbjct: 156580 tacactggggaaggtgacag 156599



to top

>gb|U00966.1|U00966 Lophopyrum elongatum salt-stress induced hydrophobic peptide (ESI3)
           gene, complete cds
          Length = 652

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 341 gaagacgccgagcggcggcaggatgatggcgaggat 376
           |||||||||||  || |||||||| |||||||||||
Sbjct: 263 gaagacgccgacgggaggcaggataatggcgaggat 228



to top

>gb|AC078863.15|AC078863 Mus musculus  BAC RP23-406N7 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 188008

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    aaatggacagaggaacaact 37
             ||||||||||||||||||||
Sbjct: 17376 aaatggacagaggaacaact 17395



to top

>gb|AC090023.20| Homo sapiens 12 BAC RP11-221N13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 114177

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    agaaggtgagcagcaggcag 308
              ||||||||||||||||||||
Sbjct: 110620 agaaggtgagcagcaggcag 110601



to top

>gb|AE004493.1| Pseudomonas aeruginosa PAO1, section 54 of 529 of the complete
           genome
          Length = 11746

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 345 acgccgagcggcggcaggatgatggcga 372
           ||||| ||||||||||||| ||||||||
Sbjct: 174 acgcccagcggcggcaggaggatggcga 147



to top

>gb|AC117440.5| Homo sapiens 3 BAC RP11-575C1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 199386

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   ctagagacaagcaggcaggc 230
             ||||||||||||||||||||
Sbjct: 95020 ctagagacaagcaggcaggc 95001



to top

>emb|AL844207.4| Zebrafish DNA sequence from clone DKEY-166M19, complete sequence
          Length = 199379

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 99     aagcaagaacaacaaacagatgtacaacagca 130
              |||||||||||||||||| || ||||| ||||
Sbjct: 188628 aagcaagaacaacaaacaaatctacaaaagca 188597



to top

>emb|X58859.1|HVTHIOL Barley DNA with region homologous to thiol protease (aleurain)
          Length = 3333

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 109  aacaaacagatgtacaacagcatgaacacaca 140
            |||||| |||||||||||| ||| ||||||||
Sbjct: 1842 aacaaatagatgtacaacaacataaacacaca 1811



to top

>emb|AJ310995.1|HVU310995 Hordeum vulgare lt101.2 gene for putative membrane protein
          Length = 3081

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 357 ggcaggatgatggcgaggat 376
           ||||||||||||||||||||
Sbjct: 517 ggcaggatgatggcgaggat 498



to top

>ref|XM_316287.2| Anopheles gambiae str. PEST ENSANGP00000020503
           (ENSANGG00000018014), partial mRNA
          Length = 1423

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 286 cgaagaaggtgagcagcagg 305
           ||||||||||||||||||||
Sbjct: 653 cgaagaaggtgagcagcagg 634



to top

>emb|CT963096.1| M.spretus DNA sequence from clone XX-CH35_391C2 on chromosome 7,
             complete sequence
          Length = 164625

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    caggaggagaggagtctaat 94
             ||||||||||||||||||||
Sbjct: 16429 caggaggagaggagtctaat 16410



to top

>emb|AL831768.9| Zebrafish DNA sequence from clone RP71-1O1 in linkage group 5, complete
             sequence
          Length = 149457

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 99    aagcaagaacaacaaacagatgtacaacagca 130
             |||||||||||||||||| || ||||| ||||
Sbjct: 40663 aagcaagaacaacaaacaaatctacaaaagca 40694



to top

>gb|AC107709.12| Mus musculus chromosome 5, clone RP23-60E7, complete sequence
          Length = 256771

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     atacacatacactggggaag 70
              ||||||||||||||||||||
Sbjct: 225359 atacacatacactggggaag 225378



to top

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 283     agccgaagaaggtgagcagc 302
               ||||||||||||||||||||
Sbjct: 6149292 agccgaagaaggtgagcagc 6149311



to top

>emb|CT025666.5| Zebrafish DNA sequence from clone DKEY-218J1 in linkage group 5, complete
              sequence
          Length = 131912

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 99     aagcaagaacaacaaacagatgtacaacagca 130
              |||||||||||||||||| || ||||| ||||
Sbjct: 128368 aagcaagaacaacaaacaaatctacaaaagca 128399



to top

>emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chromosome 13, complete
             sequence
          Length = 183340

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 202   atggatcacctagagacaagcagg 225
             ||||||||| ||||||||||||||
Sbjct: 78345 atggatcacatagagacaagcagg 78322



to top

>emb|AL929186.7| Mouse DNA sequence from clone RP23-399K8 on chromosome 2, complete
              sequence
          Length = 198573

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     aaatggacagaggaacaact 37
              ||||||||||||||||||||
Sbjct: 189877 aaatggacagaggaacaact 189858



to top

>emb|AL732572.10| Mouse DNA sequence from clone RP23-32C16 on chromosome 2, complete
             sequence
          Length = 213704

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   acaagcaggcaggcaggggc 236
             ||||||||||||||||||||
Sbjct: 53916 acaagcaggcaggcaggggc 53935



to top

>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete
             sequence
          Length = 220275

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    aagcaagaacaacaaacaga 118
             ||||||||||||||||||||
Sbjct: 12181 aagcaagaacaacaaacaga 12200



to top

>dbj|AP001293.1| Mus musculus genomic DNA, chromosome 7, clone:B131, complete sequence
          Length = 108333

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    caggaggagaggagtctaat 94
             ||||||||||||||||||||
Sbjct: 56105 caggaggagaggagtctaat 56124



to top

>dbj|AP001917.2| Mus musculus genomic DNA , chromosome 7, clone:B131T
          Length = 68121

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    caggaggagaggagtctaat 94
             ||||||||||||||||||||
Sbjct: 56106 caggaggagaggagtctaat 56125


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,229,613
Number of Sequences: 3902068
Number of extensions: 4229613
Number of successful extensions: 85136
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84390
Number of HSP's gapped (non-prelim): 744
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top