>DNAA_STRAW (Q82FD8) Chromosomal replication initiator protein dnaA|
          Length = 653

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = -1

Query: 490 PGNGSTAAKFGDQNQVNGF----SDEVRAGHSSRHTVAANGGRHERVGPPTHDKVPSARH 323
           PG G    +   +    G+    +D+ R GH+ RH     GG  +++ P   D++P+AR 
Sbjct: 115 PGQGRDPYESRGREGYEGYGRHRADDHRQGHNDRH----QGGPGDQLPPSRGDQLPTARP 170

Query: 322 GYGGKQQ 302
            Y   Q+
Sbjct: 171 AYPDYQR 177

>DL_DROME (P10041) Neurogenic locus protein delta precursor|
          Length = 833

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 24/78 (30%), Positives = 31/78 (39%)
 Frame = -1

Query: 520 VDSRSSNSMPPGNGSTAAKFGDQNQVNGFSDEVRAGHSSRHTVAANGGRHERVGPPTHDK 341
           VD    +S P  NG T       N+VN F             V ANG R ++    ++D 
Sbjct: 528 VDIDECSSGPCHNGGTC-----MNRVNSFE-----------CVCANGFRGKQCDEESYDS 571

Query: 340 VPSARHGYGGKQQGRSAG 287
           V    H YG   Q R+ G
Sbjct: 572 VTFDAHQYGATTQARADG 589

>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)|
          Length = 637

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
 Frame = -1

Query: 514 SRSSNSMPPGNGS-TAAKFGDQNQVNGFSDEVRAG--------HSSRHTVAANGGRHERV 362
           S  +   P G G+  AAK G   + +G  D   AG         S   T  A G + E  
Sbjct: 39  SEGAAKAPSGEGAGAAAKAGATEEASGGRDGEGAGEQAPDAGTESGGETPDAKGAQIEAE 98

Query: 361 GPPTHDKVPS-ARHGYGGKQ 305
           G P   K P     G GGKQ
Sbjct: 99  GAPEGTKAPQLGEEGSGGKQ 118

>E13B_TRIHA (P53626) Glucan endo-1,3-beta-glucosidase BGN13.1 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase BGN13.1)
           ((1->3)-beta-glucanase BGN13.1) (Basic
           beta-1,3-endoglucanase BGN13.1)
          Length = 762

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 19/74 (25%), Positives = 35/74 (47%)
 Frame = -1

Query: 556 VAHITRQKRGPVVDSRSSNSMPPGNGSTAAKFGDQNQVNGFSDEVRAGHSSRHTVAANGG 377
           + ++T+    PVV  R S  +   +      +G+    N    +V + ++ R +  A GG
Sbjct: 310 IENLTKDNGTPVVVVRGSTLVGASSHVNTYSYGNTVGRNPTYGDVTSSNT-RPSALAPGG 368

Query: 376 RHERVGPPTHDKVP 335
           R+  V PPT+  +P
Sbjct: 369 RYPYVAPPTYGDLP 382

>CLH_CAEEL (P34574) Probable clathrin heavy chain protein 1|
          Length = 1681

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -2

Query: 417 LGIHRGTQLLPMGEDMNELVRLHTTKSQVPDMVMEESNRADLQG 286
           +GI+R  Q+L +  D   LV   T + Q PD+ ++ + R DL G
Sbjct: 314 MGINRKGQVLSVSIDEANLVPFVTNQLQNPDLALKLAVRCDLPG 357


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,474,457
Number of Sequences: 219361
Number of extensions: 1856480
Number of successful extensions: 4809
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4806
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)