>SSRA_ARATH (P45434) Translocon-associated protein alpha subunit precursor|
           (TRAP-alpha) (Signal sequence receptor alpha subunit)
           (SSR-alpha)
          Length = 258

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -2

Query: 628 WAYGQVQQLSKKTKKGPKVELGTGTTDANMDEWLEGT 518
           WAY QVQ+L+KKTKK  KVE+GT +T+A++DEWLEGT
Sbjct: 207 WAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEGT 243

>NU5M_LUMTE (Q34947) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 574

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -1

Query: 164 FFVHLLILIEGYRPAGIVIFILPTFKSVLSPKRFAA 57
           FF HL+IL+ G+   GIV FIL  +    +PK  AA
Sbjct: 107 FFPHLIILLLGWDGLGIVSFILVIYYQ--NPKSLAA 140


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,568,163
Number of Sequences: 219361
Number of extensions: 2073419
Number of successful extensions: 5519
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5518
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)