| Clone Name | rbags20j17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_506198.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.29 mRNA Length = 1626 Score = 396 bits (200), Expect = e-107 Identities = 388/448 (86%), Gaps = 2/448 (0%) Strand = Plus / Minus Query: 214 tctcatggtacgttcatcacctggatggactgcagcatgtcagagagagcgatcaccagg 273 ||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| || ||| Sbjct: 1331 tctcaaggtacgttcatgacctggatggactgcagcatgtcggagagcgcgatgacaagg 1272 Query: 274 tcaccggacttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctc 333 || ||||||| ||||||||| || ||||||||||| |||||||| ||||||||||||||| Sbjct: 1271 tcgccggactggatcatgcccctggccttgagcagcgagaaggtacggttcaggttgctc 1212 Query: 334 tccatgtcatctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgt 393 |||||||| || ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 1211 tccatgtcgtccgagaagctgaggcggaaggggatgaggccccattggaggttcaatcgt 1152 Query: 394 ctcctcacggacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaa 453 |||||||| || |||||| | |||||||||||||| ||||||||||| |||||||| || Sbjct: 1151 ctcctcacagatgtcgaggtcgtgaaggcgaagatcgggcagtcaggacggcaccgcgag 1092 Query: 454 agcaaggaagccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttg 513 |||| || ||||||||| || || || |||||||||||||||||||| ||||| ||| Sbjct: 1091 agcagtgaggccatgtggccagtgtttgtgtagacgaaaacggcatctacctccaatttg 1032 Query: 514 ttagccattttagcagcagaaatgcagatctcttctgatattttgtcagagaaagaagac 573 || ||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 1031 ttggccattttagcggccgaaatgcagatttcttctgatattttgtcagagaaggaagat 972 Query: 574 gaaacgtcctcaagtttctagtggctcatgggtgcttctcctcccttcaccatctttcaa 633 ||||| || | ||| ||| ||| ||||| || |||||||||| || ||||| | |||| Sbjct: 971 gaaacatctttaag-ttccagttcctcat-ggcgcttctcctctctccaccacttctcaa 914 Query: 634 tccttaagctaacattactgaggacact 661 |||||| ||||||| | | ||||||||| Sbjct: 913 tccttaggctaacactccggaggacact 886
>ref|XM_476866.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2005 Score = 396 bits (200), Expect = e-107 Identities = 388/448 (86%), Gaps = 2/448 (0%) Strand = Plus / Minus Query: 214 tctcatggtacgttcatcacctggatggactgcagcatgtcagagagagcgatcaccagg 273 ||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| || ||| Sbjct: 1672 tctcaaggtacgttcatgacctggatggactgcagcatgtcggagagcgcgatgacaagg 1613 Query: 274 tcaccggacttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctc 333 || ||||||| ||||||||| || ||||||||||| |||||||| ||||||||||||||| Sbjct: 1612 tcgccggactggatcatgcccctggccttgagcagcgagaaggtacggttcaggttgctc 1553 Query: 334 tccatgtcatctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgt 393 |||||||| || ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 1552 tccatgtcgtccgagaagctgaggcggaaggggatgaggccccattggaggttcaatcgt 1493 Query: 394 ctcctcacggacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaa 453 |||||||| || |||||| | |||||||||||||| ||||||||||| |||||||| || Sbjct: 1492 ctcctcacagatgtcgaggtcgtgaaggcgaagatcgggcagtcaggacggcaccgcgag 1433 Query: 454 agcaaggaagccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttg 513 |||| || ||||||||| || || || |||||||||||||||||||| ||||| ||| Sbjct: 1432 agcagtgaggccatgtggccagtgtttgtgtagacgaaaacggcatctacctccaatttg 1373 Query: 514 ttagccattttagcagcagaaatgcagatctcttctgatattttgtcagagaaagaagac 573 || ||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 1372 ttggccattttagcggccgaaatgcagatttcttctgatattttgtcagagaaggaagat 1313 Query: 574 gaaacgtcctcaagtttctagtggctcatgggtgcttctcctcccttcaccatctttcaa 633 ||||| || | ||| ||| ||| ||||| || |||||||||| || ||||| | |||| Sbjct: 1312 gaaacatctttaag-ttccagttcctcat-ggcgcttctcctctctccaccacttctcaa 1255 Query: 634 tccttaagctaacattactgaggacact 661 |||||| ||||||| | | ||||||||| Sbjct: 1254 tccttaggctaacactccggaggacact 1227
>dbj|AK070512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055B17, full insert sequence Length = 2023 Score = 396 bits (200), Expect = e-107 Identities = 388/448 (86%), Gaps = 2/448 (0%) Strand = Plus / Minus Query: 214 tctcatggtacgttcatcacctggatggactgcagcatgtcagagagagcgatcaccagg 273 ||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| || ||| Sbjct: 1690 tctcaaggtacgttcatgacctggatggactgcagcatgtcggagagcgcgatgacaagg 1631 Query: 274 tcaccggacttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctc 333 || ||||||| ||||||||| || ||||||||||| |||||||| ||||||||||||||| Sbjct: 1630 tcgccggactggatcatgcccctggccttgagcagcgagaaggtacggttcaggttgctc 1571 Query: 334 tccatgtcatctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgt 393 |||||||| || ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 1570 tccatgtcgtccgagaagctgaggcggaaggggatgaggccccattggaggttcaatcgt 1511 Query: 394 ctcctcacggacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaa 453 |||||||| || |||||| | |||||||||||||| ||||||||||| |||||||| || Sbjct: 1510 ctcctcacagatgtcgaggtcgtgaaggcgaagatcgggcagtcaggacggcaccgcgag 1451 Query: 454 agcaaggaagccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttg 513 |||| || ||||||||| || || || |||||||||||||||||||| ||||| ||| Sbjct: 1450 agcagtgaggccatgtggccagtgtttgtgtagacgaaaacggcatctacctccaatttg 1391 Query: 514 ttagccattttagcagcagaaatgcagatctcttctgatattttgtcagagaaagaagac 573 || ||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 1390 ttggccattttagcggccgaaatgcagatttcttctgatattttgtcagagaaggaagat 1331 Query: 574 gaaacgtcctcaagtttctagtggctcatgggtgcttctcctcccttcaccatctttcaa 633 ||||| || | ||| ||| ||| ||||| || |||||||||| || ||||| | |||| Sbjct: 1330 gaaacatctttaag-ttccagttcctcat-ggcgcttctcctctctccaccacttctcaa 1273 Query: 634 tccttaagctaacattactgaggacact 661 |||||| ||||||| | | ||||||||| Sbjct: 1272 tccttaggctaacactccggaggacact 1245
>dbj|AK062119.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C09, full insert sequence Length = 1328 Score = 396 bits (200), Expect = e-107 Identities = 388/448 (86%), Gaps = 2/448 (0%) Strand = Plus / Minus Query: 214 tctcatggtacgttcatcacctggatggactgcagcatgtcagagagagcgatcaccagg 273 ||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| || ||| Sbjct: 1036 tctcaaggtacgttcatgacctggatggactgcagcatgtcggagagcgcgatgacaagg 977 Query: 274 tcaccggacttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctc 333 || ||||||| ||||||||| || ||||||||||| |||||||| ||||||||||||||| Sbjct: 976 tcgccggactggatcatgcccctggccttgagcagcgagaaggtacggttcaggttgctc 917 Query: 334 tccatgtcatctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgt 393 |||||||| || ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 916 tccatgtcgtccgagaagctgaggcggaaggggatgaggccccattggaggttcaatcgt 857 Query: 394 ctcctcacggacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaa 453 |||||||| || |||||| | |||||||||||||| ||||||||||| |||||||| || Sbjct: 856 ctcctcacagatgtcgaggtcgtgaaggcgaagatcgggcagtcaggacggcaccgcgag 797 Query: 454 agcaaggaagccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttg 513 |||| || ||||||||| || || || |||||||||||||||||||| ||||| ||| Sbjct: 796 agcagtgaggccatgtggccagtgtttgtgtagacgaaaacggcatctacctccaatttg 737 Query: 514 ttagccattttagcagcagaaatgcagatctcttctgatattttgtcagagaaagaagac 573 || ||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 736 ttggccattttagcggccgaaatgcagatttcttctgatattttgtcagagaaggaagat 677 Query: 574 gaaacgtcctcaagtttctagtggctcatgggtgcttctcctcccttcaccatctttcaa 633 ||||| || | ||| ||| ||| ||||| || |||||||||| || ||||| | |||| Sbjct: 676 gaaacatctttaag-ttccagttcctcat-ggcgcttctcctctctccaccacttctcaa 619 Query: 634 tccttaagctaacattactgaggacact 661 |||||| ||||||| | | ||||||||| Sbjct: 618 tccttaggctaacactccggaggacact 591
>dbj|AK060932.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B03, full insert sequence Length = 1105 Score = 396 bits (200), Expect = e-107 Identities = 388/448 (86%), Gaps = 2/448 (0%) Strand = Plus / Minus Query: 214 tctcatggtacgttcatcacctggatggactgcagcatgtcagagagagcgatcaccagg 273 ||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| || ||| Sbjct: 876 tctcaaggtacgttcatgacctggatggactgcagcatgtcggagagcgcgatgacaagg 817 Query: 274 tcaccggacttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctc 333 || ||||||| ||||||||| || ||||||||||| |||||||| ||||||||||||||| Sbjct: 816 tcgccggactggatcatgcccctggccttgagcagcgagaaggtacggttcaggttgctc 757 Query: 334 tccatgtcatctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgt 393 |||||||| || ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 756 tccatgtcgtccgagaagctgaggcggaaggggatgaggccccattggaggttcaatcgt 697 Query: 394 ctcctcacggacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaa 453 |||||||| || |||||| | |||||||||||||| ||||||||||| |||||||| || Sbjct: 696 ctcctcacagatgtcgaggtcgtgaaggcgaagatcgggcagtcaggacggcaccgcgag 637 Query: 454 agcaaggaagccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttg 513 |||| || ||||||||| || || || |||||||||||||||||||| ||||| ||| Sbjct: 636 agcagtgaggccatgtggccagtgtttgtgtagacgaaaacggcatctacctccaatttg 577 Query: 514 ttagccattttagcagcagaaatgcagatctcttctgatattttgtcagagaaagaagac 573 || ||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 576 ttggccattttagcggccgaaatgcagatttcttctgatattttgtcagagaaggaagat 517 Query: 574 gaaacgtcctcaagtttctagtggctcatgggtgcttctcctcccttcaccatctttcaa 633 ||||| || | ||| ||| ||| ||||| || |||||||||| || ||||| | |||| Sbjct: 516 gaaacatctttaag-ttccagttcctcat-ggcgcttctcctctctccaccacttctcaa 459 Query: 634 tccttaagctaacattactgaggacact 661 |||||| ||||||| | | ||||||||| Sbjct: 458 tccttaggctaacactccggaggacact 431
>dbj|AK066918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089N03, full insert sequence Length = 1625 Score = 389 bits (196), Expect = e-105 Identities = 387/448 (86%), Gaps = 2/448 (0%) Strand = Plus / Minus Query: 214 tctcatggtacgttcatcacctggatggactgcagcatgtcagagagagcgatcaccagg 273 ||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| || ||| Sbjct: 1330 tctcaaggtacgttcatgacctggatggactgcagcatgtcggagagcgcgatgacaagg 1271 Query: 274 tcaccggacttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctc 333 || ||||||| ||||||||| || ||||||||||| |||||||| ||||||||||||||| Sbjct: 1270 tcgccggactggatcatgcccctggccttgagcagcgagaaggtacggttcaggttgctc 1211 Query: 334 tccatgtcatctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgt 393 |||||||| || ||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1210 tccatgtcgtccgagaagctgaggcggaaagggatgaggccccattggaggttcaatcgt 1151 Query: 394 ctcctcacggacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaa 453 |||||||| || |||||| | |||||||||||||| ||||||||||| |||||||| || Sbjct: 1150 ctcctcacagatgtcgaggtcgtgaaggcgaagatcgggcagtcaggacggcaccgcgag 1091 Query: 454 agcaaggaagccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttg 513 |||| || ||||||||| || || || |||||||||||||||||||| ||||| ||| Sbjct: 1090 agcagtgaggccatgtggccagtgtttgtgtagacgaaaacggcatctacctccaatttg 1031 Query: 514 ttagccattttagcagcagaaatgcagatctcttctgatattttgtcagagaaagaagac 573 || ||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 1030 ttggccattttagcggccgaaatgcagatttcttctgatattttgtcagagaaggaagat 971 Query: 574 gaaacgtcctcaagtttctagtggctcatgggtgcttctcctcccttcaccatctttcaa 633 ||||| || | ||| ||| ||| ||||| || |||||||||| || ||||| | |||| Sbjct: 970 gaaacatctttaag-ttccagttcctcat-ggcgcttctcctctctccaccacttctcaa 913 Query: 634 tccttaagctaacattactgaggacact 661 |||||| ||||||| | | ||||||||| Sbjct: 912 tccttaggctaacactccggaggacact 885
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 313 bits (158), Expect = 4e-82 Identities = 266/302 (88%) Strand = Plus / Minus Query: 214 tctcatggtacgttcatcacctggatggactgcagcatgtcagagagagcgatcaccagg 273 ||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| || ||| Sbjct: 4303336 tctcaaggtacgttcatgacctggatggactgcagcatgtcggagagcgcgatgacaagg 4303277 Query: 274 tcaccggacttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctc 333 || ||||||| ||||||||| || ||||||||||| |||||||| ||||||||||||||| Sbjct: 4303276 tcgccggactggatcatgcccctggccttgagcagcgagaaggtacggttcaggttgctc 4303217 Query: 334 tccatgtcatctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgt 393 |||||||| || ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 4303216 tccatgtcgtccgagaagctgaggcggaaggggatgaggccccattggaggttcaatcgt 4303157 Query: 394 ctcctcacggacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaa 453 |||||||| || |||||| | |||||||||||||| ||||||||||| |||||||| || Sbjct: 4303156 ctcctcacagatgtcgaggtcgtgaaggcgaagatcgggcagtcaggacggcaccgcgag 4303097 Query: 454 agcaaggaagccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttg 513 |||| || ||||||||| || || || |||||||||||||||||||| ||||| ||| Sbjct: 4303096 agcagtgaggccatgtggccagtgtttgtgtagacgaaaacggcatctacctccaatttg 4303037 Query: 514 tt 515 || Sbjct: 4303036 tt 4303035 Score = 89.7 bits (45), Expect = 1e-14 Identities = 125/149 (83%), Gaps = 2/149 (1%) Strand = Plus / Minus Query: 513 gttagccattttagcagcagaaatgcagatctcttctgatattttgtcagagaaagaaga 572 |||| |||||||||| || ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 4302861 gttacccattttagcggccgaaatgcagatttcttctgatattttgtcagagaaggaaga 4302802 Query: 573 cgaaacgtcctcaagtttctagtggctcatgggtgcttctcctcccttcaccatctttca 632 ||||| || | ||| ||| ||| ||||| || |||||||||| || ||||| | ||| Sbjct: 4302801 tgaaacatctttaag-ttccagttcctcat-ggcgcttctcctctctccaccacttctca 4302744 Query: 633 atccttaagctaacattactgaggacact 661 ||||||| ||||||| | | ||||||||| Sbjct: 4302743 atccttaggctaacactccggaggacact 4302715
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 313 bits (158), Expect = 4e-82 Identities = 266/302 (88%) Strand = Plus / Minus Query: 214 tctcatggtacgttcatcacctggatggactgcagcatgtcagagagagcgatcaccagg 273 ||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| || ||| Sbjct: 124390 tctcaaggtacgttcatgacctggatggactgcagcatgtcggagagcgcgatgacaagg 124331 Query: 274 tcaccggacttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctc 333 || ||||||| ||||||||| || ||||||||||| |||||||| ||||||||||||||| Sbjct: 124330 tcgccggactggatcatgcccctggccttgagcagcgagaaggtacggttcaggttgctc 124271 Query: 334 tccatgtcatctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgt 393 |||||||| || ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 124270 tccatgtcgtccgagaagctgaggcggaaggggatgaggccccattggaggttcaatcgt 124211 Query: 394 ctcctcacggacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaa 453 |||||||| || |||||| | |||||||||||||| ||||||||||| |||||||| || Sbjct: 124210 ctcctcacagatgtcgaggtcgtgaaggcgaagatcgggcagtcaggacggcaccgcgag 124151 Query: 454 agcaaggaagccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttg 513 |||| || ||||||||| || || || |||||||||||||||||||| ||||| ||| Sbjct: 124150 agcagtgaggccatgtggccagtgtttgtgtagacgaaaacggcatctacctccaatttg 124091 Query: 514 tt 515 || Sbjct: 124090 tt 124089 Score = 89.7 bits (45), Expect = 1e-14 Identities = 125/149 (83%), Gaps = 2/149 (1%) Strand = Plus / Minus Query: 513 gttagccattttagcagcagaaatgcagatctcttctgatattttgtcagagaaagaaga 572 |||| |||||||||| || ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 123915 gttacccattttagcggccgaaatgcagatttcttctgatattttgtcagagaaggaaga 123856 Query: 573 cgaaacgtcctcaagtttctagtggctcatgggtgcttctcctcccttcaccatctttca 632 ||||| || | ||| ||| ||| ||||| || |||||||||| || ||||| | ||| Sbjct: 123855 tgaaacatctttaag-ttccagttcctcat-ggcgcttctcctctctccaccacttctca 123798 Query: 633 atccttaagctaacattactgaggacact 661 ||||||| ||||||| | | ||||||||| Sbjct: 123797 atccttaggctaacactccggaggacact 123769
>gb|AY106719.1| Zea mays PCO096996 mRNA sequence Length = 1611 Score = 278 bits (140), Expect = 2e-71 Identities = 227/256 (88%) Strand = Plus / Minus Query: 215 ctcatggtacgttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggt 274 |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||| Sbjct: 1279 ctcagggtacgttcatcacctggatggactgcagcatgtccgagagggcgatcacgaggt 1220 Query: 275 caccggacttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctct 334 | || |||| ||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 1219 ccccagactggatcatgcccctggccttgagcagggagaaggtgcggttcaggttgctct 1160 Query: 335 ccatgtcatctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgtc 394 ||||||| || ||||| | ||||||||||||||| |||||||| || |||||||| || | Sbjct: 1159 ccatgtcgtccgagaaggcgaggcggaaggggatcaggccccactgcaggttcagccgcc 1100 Query: 395 tcctcacggacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaaa 454 |||| ||||||||||| | ||||||||||||| |||||||| ||||||||||| || | Sbjct: 1099 tcctgacggacgtcgacgtcgtgaaggcgaagaccgggcagtcggggcggcaccgcgaga 1040 Query: 455 gcaaggaagccatgtg 470 ||| ||| |||||||| Sbjct: 1039 gcagggaggccatgtg 1024 Score = 44.1 bits (22), Expect = 0.59 Identities = 52/62 (83%) Strand = Plus / Minus Query: 514 ttagccattttagcagcagaaatgcagatctcttctgatattttgtcagagaaagaagac 573 |||||||||||||| || || |||||||||| || ||||| ||||| ||||| || ||| Sbjct: 980 ttagccattttagctgctgagttgcagatctcctccgatatcttgtcggagaaggaggac 921 Query: 574 ga 575 || Sbjct: 920 ga 919
>gb|AY106461.1| Zea mays PCO067393 mRNA sequence Length = 507 Score = 129 bits (65), Expect = 1e-26 Identities = 142/168 (84%) Strand = Plus / Minus Query: 226 ttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggtcaccggacttg 285 |||| ||| |||||||||||||||||||| ||||| |||||||||||||| || |||| Sbjct: 170 ttcaccacttggatggactgcagcatgtcggagagcgcgatcaccaggtctccagactgc 111 Query: 286 atcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctctccatgtcatct 345 | |||||| || ||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 110 accatgcccctggccttcagcagggagaaggtgcggttgaggttgctctccatgtcgtcg 51 Query: 346 gagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgt 393 || | || ||||| |||||||||||| | |||||||||| |||| Sbjct: 50 gactcgctcagccggaacgggatgaggcccnactggaggttcactcgt 3
>ref|NM_113196.2| Arabidopsis thaliana pyruvate kinase AT3G22960 mRNA, complete cds Length = 2139 Score = 99.6 bits (50), Expect = 1e-17 Identities = 266/338 (78%) Strand = Plus / Minus Query: 223 acgttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggtcaccggac 282 |||||||| |||||||| || ||||||||||| |||| |||||||| |||||||| || Sbjct: 1918 acgttcattacctggattgattgcagcatgtccgagactgcgatcacgaggtcaccagat 1859 Query: 283 ttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctctccatgtca 342 |||||||| ||||| | || || | ||||| || ||||| |||||| |||||||| Sbjct: 1858 ttgatcatacctcttgatttcagtaacgagaatgttttgttcaagttgctttccatgtcg 1799 Query: 343 tctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgtctcctcacg 402 |||||||| |||| ||||| ||||| || |||||||| ||||| | ||||| ||||| Sbjct: 1798 tctgagaagctgagacggaatgggataagtccccattgtaggtttaagcgtcttctcact 1739 Query: 403 gacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaaagcaaggaa 462 || || | | ||||||| || ||||| |||||||| ||||| || || || | || || Sbjct: 1738 gaggttgtggttgtgaaagcaaagatcgggcagtccgggcgacatcgggagaccagtgat 1679 Query: 463 gccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttgttagccatt 522 |||||||| | | | | || || |||||||| || || ||| | | |||||||||||| Sbjct: 1678 gccatgtgtccgctcgttgtgtaaacgaaaaccgcgtccactccaagattgttagccatt 1619 Query: 523 ttagcagcagaaatgcagatctcttctgatattttgtc 560 |||||||| || | |||||||||||||| |||||||| Sbjct: 1618 ttagcagctgagttacagatctcttctgagattttgtc 1581
>gb|AY056196.1| Arabidopsis thaliana putative pyruvate kinase (At3g22960) mRNA, partial cds Length = 1190 Score = 99.6 bits (50), Expect = 1e-17 Identities = 266/338 (78%) Strand = Plus / Minus Query: 223 acgttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggtcaccggac 282 |||||||| |||||||| || ||||||||||| |||| |||||||| |||||||| || Sbjct: 970 acgttcattacctggattgattgcagcatgtccgagactgcgatcacgaggtcaccagat 911 Query: 283 ttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctctccatgtca 342 |||||||| ||||| | || || | ||||| || ||||| |||||| |||||||| Sbjct: 910 ttgatcatacctcttgatttcagtaacgagaatgttttgttcaagttgctttccatgtcg 851 Query: 343 tctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgtctcctcacg 402 |||||||| |||| ||||| ||||| || |||||||| ||||| | ||||| ||||| Sbjct: 850 tctgagaagctgagacggaatgggataagtccccattgtaggtttaagcgtcttctcact 791 Query: 403 gacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaaagcaaggaa 462 || || | | ||||||| || ||||| |||||||| ||||| || || || | || || Sbjct: 790 gaggttgtggttgtgaaagcaaagatcgggcagtccgggcgacatcgggagaccagtgat 731 Query: 463 gccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttgttagccatt 522 |||||||| | | | | || || |||||||| || || ||| | | |||||||||||| Sbjct: 730 gccatgtgtccgctcgttgtgtaaacgaaaaccgcgtccactccaagattgttagccatt 671 Query: 523 ttagcagcagaaatgcagatctcttctgatattttgtc 560 |||||||| || | |||||||||||||| |||||||| Sbjct: 670 ttagcagctgagttacagatctcttctgagattttgtc 633
>gb|AY058084.1| Arabidopsis thaliana AT3g22960/F5N5_15 mRNA, complete cds Length = 2124 Score = 99.6 bits (50), Expect = 1e-17 Identities = 266/338 (78%) Strand = Plus / Minus Query: 223 acgttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggtcaccggac 282 |||||||| |||||||| || ||||||||||| |||| |||||||| |||||||| || Sbjct: 1919 acgttcattacctggattgattgcagcatgtccgagactgcgatcacgaggtcaccagat 1860 Query: 283 ttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctctccatgtca 342 |||||||| ||||| | || || | ||||| || ||||| |||||| |||||||| Sbjct: 1859 ttgatcatacctcttgatttcagtaacgagaatgttttgttcaagttgctttccatgtcg 1800 Query: 343 tctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgtctcctcacg 402 |||||||| |||| ||||| ||||| || |||||||| ||||| | ||||| ||||| Sbjct: 1799 tctgagaagctgagacggaatgggataagtccccattgtaggtttaagcgtcttctcact 1740 Query: 403 gacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaaagcaaggaa 462 || || | | ||||||| || ||||| |||||||| ||||| || || || | || || Sbjct: 1739 gaggttgtggttgtgaaagcaaagatcgggcagtccgggcgacatcgggagaccagtgat 1680 Query: 463 gccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttgttagccatt 522 |||||||| | | | | || || |||||||| || || ||| | | |||||||||||| Sbjct: 1679 gccatgtgtccgctcgttgtgtaaacgaaaaccgcgtccactccaagattgttagccatt 1620 Query: 523 ttagcagcagaaatgcagatctcttctgatattttgtc 560 |||||||| || | |||||||||||||| |||||||| Sbjct: 1619 ttagcagctgagttacagatctcttctgagattttgtc 1582
>gb|AY056793.1| Arabidopsis thaliana AT3g22960/F5N5_15 mRNA, complete cds Length = 2096 Score = 99.6 bits (50), Expect = 1e-17 Identities = 266/338 (78%) Strand = Plus / Minus Query: 223 acgttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggtcaccggac 282 |||||||| |||||||| || ||||||||||| |||| |||||||| |||||||| || Sbjct: 1892 acgttcattacctggattgattgcagcatgtccgagactgcgatcacgaggtcaccagat 1833 Query: 283 ttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctctccatgtca 342 |||||||| ||||| | || || | ||||| || ||||| |||||| |||||||| Sbjct: 1832 ttgatcatacctcttgatttcagtaacgagaatgttttgttcaagttgctttccatgtcg 1773 Query: 343 tctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgtctcctcacg 402 |||||||| |||| ||||| ||||| || |||||||| ||||| | ||||| ||||| Sbjct: 1772 tctgagaagctgagacggaatgggataagtccccattgtaggtttaagcgtcttctcact 1713 Query: 403 gacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaaagcaaggaa 462 || || | | ||||||| || ||||| |||||||| ||||| || || || | || || Sbjct: 1712 gaggttgtggttgtgaaagcaaagatcgggcagtccgggcgacatcgggagaccagtgat 1653 Query: 463 gccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttgttagccatt 522 |||||||| | | | | || || |||||||| || || ||| | | |||||||||||| Sbjct: 1652 gccatgtgtccgctcgttgtgtaaacgaaaaccgcgtccactccaagattgttagccatt 1593 Query: 523 ttagcagcagaaatgcagatctcttctgatattttgtc 560 |||||||| || | |||||||||||||| |||||||| Sbjct: 1592 ttagcagctgagttacagatctcttctgagattttgtc 1555
>gb|AY085149.1| Arabidopsis thaliana clone 13351 mRNA, complete sequence Length = 2118 Score = 99.6 bits (50), Expect = 1e-17 Identities = 266/338 (78%) Strand = Plus / Minus Query: 223 acgttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggtcaccggac 282 |||||||| |||||||| || ||||||||||| |||| |||||||| |||||||| || Sbjct: 1914 acgttcattacctggattgattgcagcatgtccgagactgcgatcacgaggtcaccagat 1855 Query: 283 ttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctctccatgtca 342 |||||||| ||||| | || || | ||||| || ||||| |||||| |||||||| Sbjct: 1854 ttgatcatacctcttgatttcagtaacgagaatgttttgttcaagttgctttccatgtcg 1795 Query: 343 tctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgtctcctcacg 402 |||||||| |||| ||||| ||||| || |||||||| ||||| | ||||| ||||| Sbjct: 1794 tctgagaagctgagacggaatgggataagtccccattgtaggtttaagcgtcttctcact 1735 Query: 403 gacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaaagcaaggaa 462 || || | | ||||||| || ||||| |||||||| ||||| || || || | || || Sbjct: 1734 gaggttgtggttgtgaaagcaaagatcgggcagtccgggcgacatcgggagaccagtgat 1675 Query: 463 gccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttgttagccatt 522 |||||||| | | | | || || |||||||| || || ||| | | |||||||||||| Sbjct: 1674 gccatgtgtccgctcgttgtgtaaacgaaaaccgcgtccactccaagattgttagccatt 1615 Query: 523 ttagcagcagaaatgcagatctcttctgatattttgtc 560 |||||||| || | |||||||||||||| |||||||| Sbjct: 1614 ttagcagctgagttacagatctcttctgagattttgtc 1577
>gb|BT002329.1| Arabidopsis thaliana clone C104993 putative pyruvate kinase (At3g22960) mRNA, complete cds Length = 1822 Score = 99.6 bits (50), Expect = 1e-17 Identities = 266/338 (78%) Strand = Plus / Minus Query: 223 acgttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggtcaccggac 282 |||||||| |||||||| || ||||||||||| |||| |||||||| |||||||| || Sbjct: 1784 acgttcattacctggattgattgcagcatgtccgagactgcgatcacgaggtcaccagat 1725 Query: 283 ttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctctccatgtca 342 |||||||| ||||| | || || | ||||| || ||||| |||||| |||||||| Sbjct: 1724 ttgatcatacctcttgatttcagtaacgagaatgttttgttcaagttgctttccatgtcg 1665 Query: 343 tctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgtctcctcacg 402 |||||||| |||| ||||| ||||| || |||||||| ||||| | ||||| ||||| Sbjct: 1664 tctgagaagctgagacggaatgggataagtccccattgtaggtttaagcgtcttctcact 1605 Query: 403 gacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaaagcaaggaa 462 || || | | ||||||| || ||||| |||||||| ||||| || || || | || || Sbjct: 1604 gaggttgtggttgtgaaagcaaagatcgggcagtccgggcgacatcgggagaccagtgat 1545 Query: 463 gccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttgttagccatt 522 |||||||| | | | | || || |||||||| || || ||| | | |||||||||||| Sbjct: 1544 gccatgtgtccgctcgttgtgtaaacgaaaaccgcgtccactccaagattgttagccatt 1485 Query: 523 ttagcagcagaaatgcagatctcttctgatattttgtc 560 |||||||| || | |||||||||||||| |||||||| Sbjct: 1484 ttagcagctgagttacagatctcttctgagattttgtc 1447
>emb|BX826206.1|CNS0A7HY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL91ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 679 Score = 93.7 bits (47), Expect = 7e-16 Identities = 267/339 (78%), Gaps = 1/339 (0%) Strand = Plus / Minus Query: 223 acgttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggtcaccggac 282 |||||||| |||||||| || ||||||||||| |||| |||||||| |||||||| || Sbjct: 470 acgttcattacctggattgattgcagcatgtccgagactgcgatcacgaggtcaccagat 411 Query: 283 ttgatcatgcctctcgccttgagcagggagaa-ggtgcggttcaggttgctctccatgtc 341 |||||||| ||||| | || || | ||||| ||| ||||| |||||| |||||||| Sbjct: 410 ttgatcatacctcttgatttcagtaacgagaatggttttgttcaagttgctttccatgtc 351 Query: 342 atctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgtctcctcac 401 |||||||| |||| ||||| ||||| || |||||||| ||||| | ||||| ||||| Sbjct: 350 gtctgagaagctgagacggaatgggataagtccccattgtaggtttaagcgtcttctcac 291 Query: 402 ggacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaaagcaagga 461 || || | | ||||||| || ||||| |||||||| ||||| || || || | || || Sbjct: 290 tgaggttgtggttgtgaaagcaaagatcgggcagtccgggcgacatcgggagaccagtga 231 Query: 462 agccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttgttagccat 521 |||||||| | | | | || || |||||||| || || ||| | | ||||||||||| Sbjct: 230 tgccatgtgtccgctcgttgtgtaaacgaaaaccgcgtccactccaagattgttagccat 171 Query: 522 tttagcagcagaaatgcagatctcttctgatattttgtc 560 ||||||||| || | |||||||||||||| |||||||| Sbjct: 170 tttagcagctgagttacagatctcttctgagattttgtc 132
>dbj|AP001300.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F5N5 Length = 71327 Score = 89.7 bits (45), Expect = 1e-14 Identities = 177/221 (80%) Strand = Plus / Minus Query: 223 acgttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggtcaccggac 282 |||||||| |||||||| || ||||||||||| |||| |||||||| |||||||| || Sbjct: 53705 acgttcattacctggattgattgcagcatgtccgagactgcgatcacgaggtcaccagat 53646 Query: 283 ttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctctccatgtca 342 |||||||| ||||| | || || | ||||| || ||||| |||||| |||||||| Sbjct: 53645 ttgatcatacctcttgatttcagtaacgagaatgttttgttcaagttgctttccatgtcg 53586 Query: 343 tctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgtctcctcacg 402 |||||||| |||| ||||| ||||| || |||||||| ||||| | ||||| ||||| Sbjct: 53585 tctgagaagctgagacggaatgggataagtccccattgtaggtttaagcgtcttctcact 53526 Query: 403 gacgtcgagtttgtgaaggcgaagattgggcagtcagggcg 443 || || | | ||||||| || ||||| |||||||| ||||| Sbjct: 53525 gaggttgtggttgtgaaagcaaagatcgggcagtccgggcg 53485 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 518 ccattttagcagcagaaatgcagatctcttctgatattttgtc 560 ||||||||||||| || | |||||||||||||| |||||||| Sbjct: 53334 ccattttagcagctgagttacagatctcttctgagattttgtc 53292
>emb|Z28373.1|NTPKPAMR N.tabacum mRNA for pyruvate kinase (plastid isozyme) Length = 2234 Score = 65.9 bits (33), Expect = 2e-07 Identities = 261/337 (77%) Strand = Plus / Minus Query: 215 ctcatggtacgttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggt 274 ||||||| || ||||| || || ||||||||||||||||| || | ||| || | |||| Sbjct: 1841 ctcatggaacattcataacttgaatggactgcagcatgtcggaaacagcaatgatgaggt 1782 Query: 275 caccggacttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctct 334 |||| |||||||||||||| | || || || | |||||| || ||| |||||||| | Sbjct: 1781 cacctgacttgatcatgccccgagcttttagtaaggagaatgtcttgttgaggttgcttt 1722 Query: 335 ccatgtcatctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgtc 394 |||| ||||| |||||| | | |||||| || || || |||||||| |||||||| |||| Sbjct: 1721 ccatatcatcggagaaactcaagcggaaaggcattagaccccattgcaggttcaggcgtc 1662 Query: 395 tcctcacggacgtcgagtttgtgaaggcgaagattgggcagtcagggcggcaccgtgaaa 454 | | || || || | |||| || || || |||||||||||||| ||||| ||||| | Sbjct: 1661 tgcgtacagatgttgtcgttgtaaatgcaaatattgggcagtcaggacggcagcgtgaca 1602 Query: 455 gcaaggaagccatgtggacacccttcgtatagacgaaaacggcatctacttccaacttgt 514 | || |||||||| || ||| || || || |||| ||||| |||||||| |||| Sbjct: 1601 agagagatgccatgtgcccattcttggtgtaaacaaaaagagcatcaacttccaaattgt 1542 Query: 515 tagccattttagcagcagaaatgcagatctcttctga 551 | ||||| || || ||||| |||||||||||||||| Sbjct: 1541 ttgccatcttggcggcagagttgcagatctcttctga 1505
>emb|AJ718125.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT3-44-420, cultivar Bright Yellow 2 Length = 361 Score = 65.9 bits (33), Expect = 2e-07 Identities = 144/181 (79%) Strand = Plus / Minus Query: 215 ctcatggtacgttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggt 274 ||||||| || ||||| || || ||||||||||||||||| || | ||| || | |||| Sbjct: 303 ctcatggaacattcataacttgaatggactgcagcatgtcggaaacagcaatgatgaggt 244 Query: 275 caccggacttgatcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctct 334 |||| |||||||||||||| | || || || | |||||| || ||| |||||||| | Sbjct: 243 cacctgacttgatcatgccccgagcttttagtaaggagaatgtcttgttgaggttgcttt 184 Query: 335 ccatgtcatctgagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgtc 394 |||| ||||| |||||| | | |||||| || || || |||||||| |||||||| |||| Sbjct: 183 ccatatcatcggagaaactcaagcggaaaggcattagaccccattgcaggttcaggcgtc 124 Query: 395 t 395 | Sbjct: 123 t 123
>gb|M64737.1|RCCATPPPB Ricinus communis ATP:pyruvate phosphotransferase (PK-p-beta) mRNA, complete cds Length = 2022 Score = 58.0 bits (29), Expect = 4e-05 Identities = 173/221 (78%) Strand = Plus / Minus Query: 226 ttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggtcaccggacttg 285 ||||| || ||||||||||| | |||||| || | ||| || || || ||||| || ||| Sbjct: 1517 ttcataacttggatggactgtaacatgtctgaaacagctataacaagatcacccgatttg 1458 Query: 286 atcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctctccatgtcatct 345 ||||| ||||| |||||||||| |||||||| ||| |||||||| ||||| ||||| Sbjct: 1457 atcattcctctagccttgagcaaagagaaggttttgttaaggttgctttccatatcatca 1398 Query: 346 gagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgtctcctcacggac 405 | || | ||||||||||| || |||||||| || | ||||| ||||||| || || Sbjct: 1397 gcaaagctcaggcggaagggtatcaggccccactgtaaattcaggcgtctccgtacagat 1338 Query: 406 gtcgagtttgtgaaggcgaagattgggcagtcagggcggca 446 || | |||| || || ||||||||||||||||| ||||| Sbjct: 1337 gtggtagttgtaaaagcaaagattgggcagtcaggccggca 1297
>gb|M64736.1|RCCATPPPA Ricinus communis ATP:pyruvate phosphotransferase (PK-p-alpha) mRNA, complete cds Length = 2115 Score = 58.0 bits (29), Expect = 4e-05 Identities = 173/221 (78%) Strand = Plus / Minus Query: 226 ttcatcacctggatggactgcagcatgtcagagagagcgatcaccaggtcaccggacttg 285 ||||| || ||||||||||| | |||||| || | ||| || || || ||||| || ||| Sbjct: 1859 ttcataacttggatggactgtaacatgtctgaaacagctataacaagatcacccgatttg 1800 Query: 286 atcatgcctctcgccttgagcagggagaaggtgcggttcaggttgctctccatgtcatct 345 ||||| ||||| |||||||||| |||||||| ||| |||||||| ||||| ||||| Sbjct: 1799 atcattcctctagccttgagcaaagagaaggttttgttaaggttgctttccatatcatca 1740 Query: 346 gagaaagtgaggcggaaggggatgaggccccattggaggttcagtcgtctcctcacggac 405 | || | ||||||||||| || |||||||| || | ||||| ||||||| || || Sbjct: 1739 gcaaagctcaggcggaagggtatcaggccccactgtaaattcaggcgtctccgtacagat 1680 Query: 406 gtcgagtttgtgaaggcgaagattgggcagtcagggcggca 446 || | |||| || || ||||||||||||||||| ||||| Sbjct: 1679 gtggtagttgtaaaagcaaagattgggcagtcaggccggca 1639
>ref|NM_101993.2| Arabidopsis thaliana unknown protein AT1G21410 mRNA, complete cds Length = 1407 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 600 catgggtgcttctcctcccttcaccatcttt 630 ||||| ||||||||||||| ||||||||||| Sbjct: 159 catggatgcttctcctcccatcaccatcttt 129
>gb|AY058081.1| Arabidopsis thaliana At1g21410/F24J8_17 mRNA, complete cds Length = 1388 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 600 catgggtgcttctcctcccttcaccatcttt 630 ||||| ||||||||||||| ||||||||||| Sbjct: 159 catggatgcttctcctcccatcaccatcttt 129
>emb|BX815967.1|CNS0ABRZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZG06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1318 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 600 catgggtgcttctcctcccttcaccatcttt 630 ||||| ||||||||||||| ||||||||||| Sbjct: 110 catggatgcttctcctcccatcaccatcttt 80
>gb|AY085898.1| Arabidopsis thaliana clone 19486 mRNA, complete sequence Length = 1391 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 600 catgggtgcttctcctcccttcaccatcttt 630 ||||| ||||||||||||| ||||||||||| Sbjct: 143 catggatgcttctcctcccatcaccatcttt 113
>gb|AC015447.8|AC015447 Arabidopsis thaliana chromosome I BAC F24J8 genomic sequence, complete sequence Length = 108365 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 600 catgggtgcttctcctcccttcaccatcttt 630 ||||| ||||||||||||| ||||||||||| Sbjct: 25541 catggatgcttctcctcccatcaccatcttt 25511
>gb|AC144643.3| Canis familiaris clone RP81-410C20, complete sequence Length = 115479 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 525 agcagcagaaatgcagatctcttctgatatttt 557 |||| ||||||||||||||||| ||||| |||| Sbjct: 111024 agcaacagaaatgcagatctctgctgatgtttt 110992
>emb|CR391967.7| Zebrafish DNA sequence from clone CH211-107E6 in linkage group 25, complete sequence Length = 97560 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 634 tccttaagctaacattactga 654 ||||||||||||||||||||| Sbjct: 69343 tccttaagctaacattactga 69363
>emb|AL772398.7| Mouse DNA sequence from clone RP23-173J23 on chromosome 2, complete sequence Length = 200773 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 gccttgagcagggagaaggtg 318 ||||||||||||||||||||| Sbjct: 27336 gccttgagcagggagaaggtg 27316
>ref|NM_102503.2| Arabidopsis thaliana structural constituent of ribosome AT1G27400 mRNA, complete cds Length = 826 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 attttgtcagagaaagaaga 572 |||||||||||||||||||| Sbjct: 543 attttgtcagagaaagaaga 562
>ref|XM_464948.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4147 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cctagataatacatgagttt 66 |||||||||||||||||||| Sbjct: 2685 cctagataatacatgagttt 2666
>gb|AC150530.4| Bos taurus BAC CH240-86O22 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 190177 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 atggactgcagcatgtcaga 257 |||||||||||||||||||| Sbjct: 93558 atggactgcagcatgtcaga 93539
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 ttttgtcagagaaagaagac 573 |||||||||||||||||||| Sbjct: 5053096 ttttgtcagagaaagaagac 5053077
>ref|XR_003417.1| PREDICTED: Mus musculus similar to translocated promoter region protein (LOC629960), mRNA Length = 4863 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 tcttctgatattttgtcagagaaa 567 ||||| |||||||||||||||||| Sbjct: 4730 tcttcagatattttgtcagagaaa 4707
>ref|XM_907012.2| PREDICTED: Mus musculus similar to Stretchin-Mlck CG18255-PA, isoform A (LOC632784), mRNA Length = 12501 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 tcttctgatattttgtcagagaaa 567 ||||| |||||||||||||||||| Sbjct: 4718 tcttcagatattttgtcagagaaa 4695
>ref|XM_985773.1| PREDICTED: Mus musculus hypothetical protein LOC666749 (LOC666749), mRNA Length = 1104 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 tcttctgatattttgtcagagaaa 567 ||||| |||||||||||||||||| Sbjct: 470 tcttcagatattttgtcagagaaa 447
>gb|AC117251.3| Mus musculus BAC clone RP24-372C12 from chromosome 8, complete sequence Length = 191927 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 attttagcagcagaaatgca 539 |||||||||||||||||||| Sbjct: 77884 attttagcagcagaaatgca 77865
>emb|AL050338.12|HSJ899B16 Human DNA sequence from clone RP5-899B16 on chromosome 6q23.2-24.3 Contains two novel genes, complete sequence Length = 122564 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 ctcccttcaccatctttcaa 633 |||||||||||||||||||| Sbjct: 76198 ctcccttcaccatctttcaa 76217
>gb|AY077651.1| Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 531 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 attttgtcagagaaagaaga 572 |||||||||||||||||||| Sbjct: 448 attttgtcagagaaagaaga 467
>gb|AF428449.1|AF428449 Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 712 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 attttgtcagagaaagaaga 572 |||||||||||||||||||| Sbjct: 483 attttgtcagagaaagaaga 502
>gb|AF428271.1|AF428271 Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 762 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 attttgtcagagaaagaaga 572 |||||||||||||||||||| Sbjct: 483 attttgtcagagaaagaaga 502
>gb|AC021082.4|AC021082 Homo sapiens chromosome 5 clone CTC-431D1, complete sequence Length = 118645 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aactgcagcacattattatt 100 |||||||||||||||||||| Sbjct: 45138 aactgcagcacattattatt 45119
>gb|AY037249.1| Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 767 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 attttgtcagagaaagaaga 572 |||||||||||||||||||| Sbjct: 483 attttgtcagagaaagaaga 502
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cctagataatacatgagttt 66 |||||||||||||||||||| Sbjct: 10447743 cctagataatacatgagttt 10447724
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 cagggcggcaccgtgaaagc 456 |||||||||||||||||||| Sbjct: 2411601 cagggcggcaccgtgaaagc 2411620
>gb|AY088522.1| Arabidopsis thaliana clone 749 mRNA, complete sequence Length = 747 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 attttgtcagagaaagaaga 572 |||||||||||||||||||| Sbjct: 543 attttgtcagagaaagaaga 562
>gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana BAC F17L21 from chromosome I, complete sequence Length = 99690 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 attttgtcagagaaagaaga 572 |||||||||||||||||||| Sbjct: 60429 attttgtcagagaaagaaga 60448
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 ttttgtcagagaaagaagac 573 |||||||||||||||||||| Sbjct: 1615292 ttttgtcagagaaagaagac 1615311
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cctagataatacatgagttt 66 |||||||||||||||||||| Sbjct: 90165 cctagataatacatgagttt 90146
>dbj|AP005694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0063E14 Length = 174415 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cctagataatacatgagttt 66 |||||||||||||||||||| Sbjct: 28911 cctagataatacatgagttt 28892
>dbj|AK121583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037F21, full insert sequence Length = 4147 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cctagataatacatgagttt 66 |||||||||||||||||||| Sbjct: 2685 cctagataatacatgagttt 2666
>emb|BX005049.6| Zebrafish DNA sequence from clone DKEY-89O18 in linkage group 24, complete sequence Length = 251421 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 agcagcagaaatgcagatct 544 |||||||||||||||||||| Sbjct: 70882 agcagcagaaatgcagatct 70863
>emb|BX296533.9| Zebrafish DNA sequence from clone DKEY-54O1 in linkage group 5, complete sequence Length = 200047 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 agcagcagaaatgcagatct 544 |||||||||||||||||||| Sbjct: 9949 agcagcagaaatgcagatct 9930
>emb|AL645600.11| Mouse DNA sequence from clone RP23-396N4 on chromosome 11, complete sequence Length = 180286 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 tcttctgatattttgtcagagaaa 567 ||||| |||||||||||||||||| Sbjct: 115287 tcttcagatattttgtcagagaaa 115264 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,941,087 Number of Sequences: 3902068 Number of extensions: 5941087 Number of successful extensions: 101834 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101610 Number of HSP's gapped (non-prelim): 212 length of query: 672 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 649 effective length of database: 17,143,297,704 effective search space: 11126000209896 effective search space used: 11126000209896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)