ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20j06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome... 80 8e-12
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 80 8e-12
3dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic D... 80 8e-12
4dbj|AK059516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 8e-12
5gb|AE000512.1| Thermotoga maritima MSB8, complete genome 46 0.12
6gb|AC140245.3| Mus musculus BAC clone RP23-293J3 from chromosome... 42 1.8
7gb|AC121603.4| Mus musculus BAC clone RP23-310D9 from 18, comple... 42 1.8
8emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, co... 42 1.8
9emb|CT573044.1| Pig DNA sequence from clone XX-BE156J14 on chrom... 42 1.8
10ref|NM_104943.2| Arabidopsis thaliana hydrolase, hydrolyzing O-g... 40 7.1
11ref|XM_511711.1| PREDICTED: Pan troglodytes similar to Beta heav... 40 7.1
12gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 7.1
13ref|XM_420088.1| PREDICTED: Gallus gallus similar to dynein beta... 40 7.1
14ref|NM_029746.2| Mus musculus component of oligomeric golgi comp... 40 7.1
15gb|AC122399.4| Mus musculus BAC clone RP24-92B2 from chromosome ... 40 7.1
16ref|XM_798546.1| Trypanosoma brucei TREU927 pseudouridylate synt... 40 7.1
17ref|XM_387954.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 7.1
18ref|XM_781928.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 7.1
19gb|AC111086.18| Mus musculus chromosome 7, clone RP23-152P5, com... 40 7.1
20emb|CR457462.13| Zebrafish DNA sequence from clone CH211-1O7 in ... 40 7.1
21gb|AC091614.3| Homo sapiens chromosome 1 clone RP4-665J23, compl... 40 7.1
22gb|AY062481.1| Arabidopsis thaliana putative beta-fructosidase (... 40 7.1
23dbj|AK157348.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 7.1
24gb|AC164657.4| Pan troglodytes BAC clone CH251-389C15 from chrom... 40 7.1
25dbj|AK169298.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 7.1
26dbj|AK171726.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 7.1
27gb|AY039610.1| Arabidopsis thaliana At1g62660/F23N19_3 mRNA, com... 40 7.1
28dbj|AK012236.1| Mus musculus 11 days embryo whole body cDNA, RIK... 40 7.1
29dbj|AK089920.1| Mus musculus RCB-1283 B16 melanoma cDNA, RIKEN f... 40 7.1
30gb|AC007190.4|AC007190 Genomic sequence for Arabidopsis thaliana... 40 7.1
31gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis thaliana... 40 7.1
32gb|AC016182.24| Homo sapiens chromosome 17, clone RP11-559N14, c... 40 7.1
33gb|AC172304.2| Gallus gallus BAC clone CH261-75C12 from chromoso... 40 7.1
34gb|AC110921.9| Homo sapiens chromosome 17, clone CTD-2653B5, com... 40 7.1
35gb|AC116491.8| Homo sapiens chromosome 17, clone CTD-3089B9, com... 40 7.1
36gb|AC007448.14| Homo sapiens chromosome 17, clone RP11-401F2, co... 40 7.1
37gb|AC175058.1| Mus musculus BAC clone RP23-210C4 from chromosome... 40 7.1
38emb|BX649229.2| Chicken DNA sequence from clone WAG-41C10, compl... 40 7.1
39emb|X99111.1|ATBETAFRU A.thaliana gene coding for beta-fructosidase 40 7.1
40emb|X89454.1|ATBFRUCT Arabidopsis thaliana mRNA for Beta-fructos... 40 7.1
41emb|X95537.1|ATBFRUC A.thaliana mRNa for beta-fructosidase 40 7.1
42gb|BC011435.1| Mus musculus component of oligomeric golgi comple... 40 7.1
43dbj|AP003025.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.1
44gb|AC160024.2| Pan troglodytes BAC clone CH251-374N3 from chromo... 40 7.1
45emb|AL954319.10| Human DNA sequence from clone RP11-5D4 on chrom... 40 7.1
46gb|AC003682.1|AC003682 Homo sapiens chromosome 19, overlapping c... 40 7.1
47gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, comple... 40 7.1
48gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complet... 40 7.1 
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0065A15, complete sequence
          Length = 168806

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 82/96 (85%)
 Strand = Plus / Minus

                                                                          
Query: 386    acttctctccggagggcgtcaacctccccggcatactccttctggtcctctgaaggcagc 445
              ||||||||||||||| | || |||||||| |||||||| || || || ||||| |||| |
Sbjct: 136222 acttctctccggaggtcatccacctccccagcatactctttttgctcttctgatggcaac 136163

                                                  
Query: 446    tcctccagctgcacccccagtctgtacagaacactg 481
              ||||||| |||||| |||| ||||||||| ||||||
Sbjct: 136162 tcctccaactgcacgcccaatctgtacagtacactg 136127
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 82/96 (85%)
 Strand = Plus / Minus

                                                                            
Query: 386      acttctctccggagggcgtcaacctccccggcatactccttctggtcctctgaaggcagc 445
                ||||||||||||||| | || |||||||| |||||||| || || || ||||| |||| |
Sbjct: 19653147 acttctctccggaggtcatccacctccccagcatactctttttgctcttctgatggcaac 19653088

                                                    
Query: 446      tcctccagctgcacccccagtctgtacagaacactg 481
                ||||||| |||||| |||| ||||||||| ||||||
Sbjct: 19653087 tcctccaactgcacgcccaatctgtacagtacactg 19653052
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>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1399_D07, complete sequence
          Length = 65000

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 82/96 (85%)
 Strand = Plus / Minus

                                                                         
Query: 386   acttctctccggagggcgtcaacctccccggcatactccttctggtcctctgaaggcagc 445
             ||||||||||||||| | || |||||||| |||||||| || || || ||||| |||| |
Sbjct: 62629 acttctctccggaggtcatccacctccccagcatactctttttgctcttctgatggcaac 62570

                                                 
Query: 446   tcctccagctgcacccccagtctgtacagaacactg 481
             ||||||| |||||| |||| ||||||||| ||||||
Sbjct: 62569 tcctccaactgcacgcccaatctgtacagtacactg 62534
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>dbj|AK059516.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-B12, full
            insert sequence
          Length = 1586

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 82/96 (85%)
 Strand = Plus / Minus

                                                                        
Query: 386  acttctctccggagggcgtcaacctccccggcatactccttctggtcctctgaaggcagc 445
            ||||||||||||||| | || |||||||| |||||||| || || || ||||| |||| |
Sbjct: 1234 acttctctccggaggtcatccacctccccagcatactctttttgctcttctgatggcaac 1175

                                                
Query: 446  tcctccagctgcacccccagtctgtacagaacactg 481
            ||||||| |||||| |||| ||||||||| ||||||
Sbjct: 1174 tcctccaactgcacgcccaatctgtacagtacactg 1139
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>gb|AE000512.1| Thermotoga maritima MSB8, complete genome
          Length = 1860725

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 231    aaataatctactctttcaaaaac 253
              |||||||||||||||||||||||
Sbjct: 456627 aaataatctactctttcaaaaac 456605
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>gb|AC140245.3| Mus musculus BAC clone RP23-293J3 from chromosome 18, complete sequence
          Length = 195082

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 290   ggcaggctgcttcccttccct 310
             |||||||||||||||||||||
Sbjct: 37309 ggcaggctgcttcccttccct 37329
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>gb|AC121603.4| Mus musculus BAC clone RP23-310D9 from 18, complete sequence
          Length = 195555

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 290  ggcaggctgcttcccttccct 310
            |||||||||||||||||||||
Sbjct: 5934 ggcaggctgcttcccttccct 5914
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>emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, complete sequence
          Length = 207067

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 284    aaactcggcaggctgcttccc 304
              |||||||||||||||||||||
Sbjct: 116034 aaactcggcaggctgcttccc 116054
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>emb|CT573044.1| Pig DNA sequence from clone XX-BE156J14 on chromosome 14, complete
              sequence
          Length = 184551

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 441    gcagctcctccagctgcaccc 461
              |||||||||||||||||||||
Sbjct: 159404 gcagctcctccagctgcaccc 159384
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>ref|NM_104943.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
            AT1G62660 mRNA, complete cds
          Length = 2428

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 229  gaaaataatctactctttcaaaaa 252
            ||||||||| ||||||||||||||
Sbjct: 2322 gaaaataatttactctttcaaaaa 2299
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>ref|XM_511711.1| PREDICTED: Pan troglodytes similar to Beta heavy chain of outer-arm
            axonemal dynein ATPase (LOC454924), mRNA
          Length = 14556

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  gcagctcctccagctgcacc 460
            ||||||||||||||||||||
Sbjct: 6553 gcagctcctccagctgcacc 6534
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 442    cagctcctccagctgcacccccag 465
              |||||||| |||||||||||||||
Sbjct: 445781 cagctcctgcagctgcacccccag 445758
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>ref|XM_420088.1| PREDICTED: Gallus gallus similar to dynein beta heavy chain, ciliary
            - sea urchin (Anthocidaris crassispina) (LOC422086), mRNA
          Length = 8208

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  gcagctcctccagctgcacc 460
            ||||||||||||||||||||
Sbjct: 2116 gcagctcctccagctgcacc 2097
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>ref|NM_029746.2| Mus musculus component of oligomeric golgi complex 2 (Cog2), mRNA
          Length = 2780

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 cagctcctccagctgcaccc 461
           ||||||||||||||||||||
Sbjct: 188 cagctcctccagctgcaccc 169
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>gb|AC122399.4| Mus musculus BAC clone RP24-92B2 from chromosome 17, complete sequence
          Length = 184002

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   gaaaataatctactctttca 248
             ||||||||||||||||||||
Sbjct: 66924 gaaaataatctactctttca 66905
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>ref|XM_798546.1| Trypanosoma brucei TREU927 pseudouridylate synthase (Tb09.160.2000)
           partial mRNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 214 agacagactctttcggaaaa 233
           ||||||||||||||||||||
Sbjct: 136 agacagactctttcggaaaa 155
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>ref|XM_387954.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07778.1)
           partial mRNA
          Length = 1428

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 65  tccaagtaacacagcagatg 84
           ||||||||||||||||||||
Sbjct: 654 tccaagtaacacagcagatg 673
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>ref|XM_781928.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC581951 (LOC581951), mRNA
          Length = 693

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 14  gagctcacaacagggaagat 33
           ||||||||||||||||||||
Sbjct: 294 gagctcacaacagggaagat 313
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>gb|AC111086.18| Mus musculus chromosome 7, clone RP23-152P5, complete sequence
          Length = 186200

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   cagctcctccagctgcaccc 461
             ||||||||||||||||||||
Sbjct: 84327 cagctcctccagctgcaccc 84308
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>emb|CR457462.13| Zebrafish DNA sequence from clone CH211-1O7 in linkage group 13,
             complete sequence
          Length = 166823

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   ctaacctatctatccatcca 153
             ||||||||||||||||||||
Sbjct: 91002 ctaacctatctatccatcca 90983
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>gb|AC091614.3| Homo sapiens chromosome 1 clone RP4-665J23, complete sequence
          Length = 107764

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 237   tctactctttcaaaaacttggcaa 260
             |||||||||||||||| |||||||
Sbjct: 59217 tctactctttcaaaaaattggcaa 59240
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>gb|AY062481.1| Arabidopsis thaliana putative beta-fructosidase (At1g62660; T3P18.21)
            mRNA, complete cds
          Length = 2329

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 229  gaaaataatctactctttcaaaaa 252
            ||||||||| ||||||||||||||
Sbjct: 2322 gaaaataatttactctttcaaaaa 2299
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>dbj|AK157348.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830212C01 product:component of
           oligomeric golgi complex 2, full insert sequence
          Length = 2101

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 cagctcctccagctgcaccc 461
           ||||||||||||||||||||
Sbjct: 210 cagctcctccagctgcaccc 191
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>gb|AC164657.4| Pan troglodytes BAC clone CH251-389C15 from chromosome unknown,
             complete sequence
          Length = 182992

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 449   tccagctgcacccccagtct 468
             ||||||||||||||||||||
Sbjct: 67946 tccagctgcacccccagtct 67927
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>dbj|AK169298.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:I920178A01 product:component of oligomeric golgi
           complex 2, full insert sequence
          Length = 2792

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 cagctcctccagctgcaccc 461
           ||||||||||||||||||||
Sbjct: 218 cagctcctccagctgcaccc 199
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>dbj|AK171726.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830007D23 product:component of
           oligomeric golgi complex 2, full insert sequence
          Length = 2741

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 cagctcctccagctgcaccc 461
           ||||||||||||||||||||
Sbjct: 167 cagctcctccagctgcaccc 148
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>gb|AY039610.1| Arabidopsis thaliana At1g62660/F23N19_3 mRNA, complete cds
          Length = 2233

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 229  gaaaataatctactctttcaaaaa 252
            ||||||||| ||||||||||||||
Sbjct: 2131 gaaaataatttactctttcaaaaa 2108
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>dbj|AK012236.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2700012E02 product:low density
           lipoprotein receptor defect C complementing, full insert
           sequence
          Length = 419

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 cagctcctccagctgcaccc 461
           ||||||||||||||||||||
Sbjct: 182 cagctcctccagctgcaccc 163
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>dbj|AK089920.1| Mus musculus RCB-1283 B16 melanoma cDNA, RIKEN full-length enriched
           library, clone:G430003G24 product:low density
           lipoprotein receptor defect C complementing, full insert
           sequence
          Length = 2807

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 cagctcctccagctgcaccc 461
           ||||||||||||||||||||
Sbjct: 232 cagctcctccagctgcaccc 213
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>gb|AC007190.4|AC007190 Genomic sequence for Arabidopsis thaliana BAC F23N19 from chromosome I,
             complete sequence
          Length = 86801

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   gaaaataatctactctttcaaaaa 252
             ||||||||| ||||||||||||||
Sbjct: 16627 gaaaataatttactctttcaaaaa 16604
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>gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis thaliana BAC T3P18 from Chromosome 1,
             complete sequence
          Length = 97054

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   gaaaataatctactctttcaaaaa 252
             ||||||||| ||||||||||||||
Sbjct: 94649 gaaaataatttactctttcaaaaa 94626
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>gb|AC016182.24| Homo sapiens chromosome 17, clone RP11-559N14, complete sequence
          Length = 181971

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   gcagctcctccagctgcacc 460
             ||||||||||||||||||||
Sbjct: 66467 gcagctcctccagctgcacc 66486
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>gb|AC172304.2| Gallus gallus BAC clone CH261-75C12 from chromosome ul, complete sequence
          Length = 227366

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     taaaaggaaaaccttccaag 70
              ||||||||||||||||||||
Sbjct: 182102 taaaaggaaaaccttccaag 182083
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>gb|AC110921.9| Homo sapiens chromosome 17, clone CTD-2653B5, complete sequence
          Length = 240058

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    taaaaggaaaaccttccaag 70
             ||||||||||||||||||||
Sbjct: 24716 taaaaggaaaaccttccaag 24697
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>gb|AC116491.8| Homo sapiens chromosome 17, clone CTD-3089B9, complete sequence
          Length = 108879

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     taaaaggaaaaccttccaag 70
              ||||||||||||||||||||
Sbjct: 104917 taaaaggaaaaccttccaag 104936
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>gb|AC007448.14| Homo sapiens chromosome 17, clone RP11-401F2, complete sequence
          Length = 195558

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    taaaaggaaaaccttccaag 70
             ||||||||||||||||||||
Sbjct: 11463 taaaaggaaaaccttccaag 11482
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>gb|AC175058.1| Mus musculus BAC clone RP23-210C4 from chromosome 17, complete sequence
          Length = 218488

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    gaaaataatctactctttca 248
              ||||||||||||||||||||
Sbjct: 210744 gaaaataatctactctttca 210763
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>emb|BX649229.2| Chicken DNA sequence from clone WAG-41C10, complete sequence
          Length = 147869

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   aggcagctcctccagctgca 458
             ||||||||||||||||||||
Sbjct: 34178 aggcagctcctccagctgca 34197
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>emb|X99111.1|ATBETAFRU A.thaliana gene coding for beta-fructosidase
          Length = 11937

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 229  gaaaataatctactctttcaaaaa 252
            ||||||||| ||||||||||||||
Sbjct: 9310 gaaaataatttactctttcaaaaa 9287
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>emb|X89454.1|ATBFRUCT Arabidopsis thaliana mRNA for Beta-fructosidase
          Length = 1890

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 229  gaaaataatctactctttcaaaaa 252
            ||||||||| ||||||||||||||
Sbjct: 1834 gaaaataatttactctttcaaaaa 1811
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>emb|X95537.1|ATBFRUC A.thaliana mRNa for beta-fructosidase
          Length = 2092

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 229  gaaaataatctactctttcaaaaa 252
            ||||||||| ||||||||||||||
Sbjct: 2066 gaaaataatttactctttcaaaaa 2043
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>gb|BC011435.1| Mus musculus component of oligomeric golgi complex 2, mRNA (cDNA
           clone MGC:18753 IMAGE:4010102), complete cds
          Length = 2780

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 cagctcctccagctgcaccc 461
           ||||||||||||||||||||
Sbjct: 188 cagctcctccagctgcaccc 169
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>dbj|AP003025.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-217L21, complete
             sequence
          Length = 193828

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 449   tccagctgcacccccagtct 468
             ||||||||||||||||||||
Sbjct: 70279 tccagctgcacccccagtct 70260
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>gb|AC160024.2| Pan troglodytes BAC clone CH251-374N3 from chromosome unknown, complete
             sequence
          Length = 163279

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 449   tccagctgcacccccagtct 468
             ||||||||||||||||||||
Sbjct: 14242 tccagctgcacccccagtct 14261
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>emb|AL954319.10| Human DNA sequence from clone RP11-5D4 on chromosome 1, complete sequence
          Length = 186291

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    taacctatctatccatccaa 154
              ||||||||||||||||||||
Sbjct: 122245 taacctatctatccatccaa 122226
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>gb|AC003682.1|AC003682 Homo sapiens chromosome 19, overlapping cosmids F18547, F11133, R27945,
              R28830 and R32804, complete sequence
          Length = 153875

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    taacctatctatccatccaa 154
              ||||||||||||||||||||
Sbjct: 143688 taacctatctatccatccaa 143707
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>gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, complete sequence
          Length = 169193

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    cagctcctccagctgcaccc 461
              ||||||||||||||||||||
Sbjct: 167821 cagctcctccagctgcaccc 167840
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>gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complete sequence
          Length = 191241

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   cagctcctccagctgcaccc 461
             ||||||||||||||||||||
Sbjct: 57980 cagctcctccagctgcaccc 57999


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,457,499
Number of Sequences: 3902068
Number of extensions: 4457499
Number of successful extensions: 145940
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145785
Number of HSP's gapped (non-prelim): 155
length of query: 527
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 504
effective length of database: 17,143,297,704
effective search space: 8640222042816
effective search space used: 8640222042816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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