ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags20j04 |
|---|---|
| Clone Library Name | barley_pub |
>IDHP_MEDSA (Q40345) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC| 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) Length = 433 Score = 195 bits (495), Expect(2) = 8e-64 Identities = 96/111 (86%), Positives = 104/111 (93%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+CPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNA LL Sbjct: 317 VLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNATLL 376 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVAAE 224 +F +KLE AC+G VESGKMTKDLAL++HG SK++R YLNTEEFIDAVAAE Sbjct: 377 DFTEKLEAACIGVVESGKMTKDLALILHG-SKLSREHYLNTEEFIDAVAAE 426 Score = 68.9 bits (167), Expect(2) = 8e-64 Identities = 31/35 (88%), Positives = 32/35 (91%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 GYVWACKNYDGDVQSDFLAQGFGSLGLMTS + P Sbjct: 287 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 321
>IDHC_SOYBN (Q06197) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 413 Score = 195 bits (495), Expect(2) = 8e-64 Identities = 95/111 (85%), Positives = 105/111 (94%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+CPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNA+LL Sbjct: 297 VLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLL 356 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVAAE 224 +F +KLE AC+G VE+GKMTKDLAL++HG SK++R YLNTEEFIDAVAAE Sbjct: 357 DFTEKLEAACIGVVEAGKMTKDLALILHG-SKLSREHYLNTEEFIDAVAAE 406 Score = 68.9 bits (167), Expect(2) = 8e-64 Identities = 31/35 (88%), Positives = 32/35 (91%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 GYVWACKNYDGDVQSDFLAQGFGSLGLMTS + P Sbjct: 267 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 301
>IDHC_TOBAC (P50218) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 415 Score = 188 bits (478), Expect(2) = 7e-62 Identities = 92/111 (82%), Positives = 102/111 (91%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+CPDGKTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFAWTRGLAHRA LD+N RLL Sbjct: 296 VLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRATLDNNERLL 355 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVAAE 224 +F +KLE AC+G VESGKMTKDLAL++HG SK++R YLNTEEFIDAVA E Sbjct: 356 DFTEKLEAACIGAVESGKMTKDLALIIHG-SKLSRDHYLNTEEFIDAVADE 405 Score = 68.9 bits (167), Expect(2) = 7e-62 Identities = 31/35 (88%), Positives = 32/35 (91%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 GYVWACKNYDGDVQSDFLAQGFGSLGLMTS + P Sbjct: 266 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 300
>IDHC_SOLTU (P50217) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 416 Score = 186 bits (471), Expect(2) = 5e-61 Identities = 90/111 (81%), Positives = 100/111 (90%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+CPDGKTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFAWTRGLAHRA LD+N RLL Sbjct: 296 VLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRATLDNNERLL 355 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVAAE 224 +F +KLE AC+G VESGKMTKDLAL++ SK++R YLNTEEFIDAVA E Sbjct: 356 DFTEKLEAACIGAVESGKMTKDLALIIIHGSKLSREHYLNTEEFIDAVADE 406 Score = 68.9 bits (167), Expect(2) = 5e-61 Identities = 31/35 (88%), Positives = 32/35 (91%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 GYVWACKNYDGDVQSDFLAQGFGSLGLMTS + P Sbjct: 266 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 300
>IDHC_MICOH (Q9Z2K8) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 157 bits (398), Expect(2) = 3e-50 Identities = 75/106 (70%), Positives = 88/106 (83%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+CPDGKT+EAEAAHGTVTRH+R+HQKG ETSTN IASIFAW+RGLAHRA+LD+N L Sbjct: 294 VLICPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFAWSRGLAHRARLDNNTELS 353 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFID 239 FA+ LEE C+ T+E+G MTKDLA + G V RSDYLNT EF+D Sbjct: 354 FFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMD 399 Score = 60.8 bits (146), Expect(2) = 3e-50 Identities = 25/35 (71%), Positives = 31/35 (88%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 G++WACKNYDGDVQSD +AQG+GSLG+MTS + P Sbjct: 264 GFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICP 298
>IDHC_MICME (Q9Z2K9) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 157 bits (398), Expect(2) = 3e-50 Identities = 75/106 (70%), Positives = 88/106 (83%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+CPDGKT+EAEAAHGTVTRH+R+HQKG ETSTN IASIFAW+RGLAHRA+LD+N L Sbjct: 294 VLICPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFAWSRGLAHRARLDNNTELS 353 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFID 239 FA+ LEE C+ T+E+G MTKDLA + G V RSDYLNT EF+D Sbjct: 354 FFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMD 399 Score = 60.8 bits (146), Expect(2) = 3e-50 Identities = 25/35 (71%), Positives = 31/35 (88%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 G++WACKNYDGDVQSD +AQG+GSLG+MTS + P Sbjct: 264 GFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICP 298
>IDHC_RAT (P41562) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 156 bits (394), Expect(2) = 9e-50 Identities = 75/106 (70%), Positives = 87/106 (82%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+CPDGKT+EAEAAHGTVTRH+R++QKG ETSTN IASIFAW+RGLAHRAKLD+N L Sbjct: 294 VLICPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELS 353 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFID 239 FA LEE C+ T+E+G MTKDLA + G V RSDYLNT EF+D Sbjct: 354 FFANALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMD 399 Score = 60.8 bits (146), Expect(2) = 9e-50 Identities = 25/35 (71%), Positives = 31/35 (88%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 G++WACKNYDGDVQSD +AQG+GSLG+MTS + P Sbjct: 264 GFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICP 298
>IDHP_BOVIN (Q04467) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 151 bits (382), Expect(2) = 1e-49 Identities = 75/109 (68%), Positives = 86/109 (78%), Gaps = 1/109 (0%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+CPDGKTIEAEAAHGTVTRH+R HQKG TSTN IASIFAWTRGL HR KLD N L+ Sbjct: 333 VLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLI 392 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSD-YLNTEEFIDAV 233 FAQ LE+ CV TVESG MTKDLA +HG S V ++ +LNT +F+D + Sbjct: 393 RFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDTI 441 Score = 65.1 bits (157), Expect(2) = 1e-49 Identities = 29/35 (82%), Positives = 31/35 (88%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 G+VWACKNYDGDVQSD LAQGFGSLGLMTS + P Sbjct: 303 GFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCP 337
>IDHP_PIG (P33198) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) (Fragment) Length = 421 Score = 151 bits (382), Expect(2) = 1e-49 Identities = 75/109 (68%), Positives = 86/109 (78%), Gaps = 1/109 (0%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+CPDGKTIEAEAAHGTVTRH+R HQKG TSTN IASIFAWTRGL HR KLD N L+ Sbjct: 302 VLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLI 361 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSD-YLNTEEFIDAV 233 FAQ LE+ CV TVESG MTKDLA +HG S V ++ +LNT +F+D + Sbjct: 362 RFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDTI 410 Score = 65.1 bits (157), Expect(2) = 1e-49 Identities = 29/35 (82%), Positives = 31/35 (88%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 G+VWACKNYDGDVQSD LAQGFGSLGLMTS + P Sbjct: 272 GFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCP 306
>IDHP_HUMAN (P48735) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 151 bits (381), Expect(2) = 2e-49 Identities = 75/109 (68%), Positives = 86/109 (78%), Gaps = 1/109 (0%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+CPDGKTIEAEAAHGTVTRH+R HQKG TSTN IASIFAWTRGL HR KLD N L+ Sbjct: 333 VLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLI 392 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSD-YLNTEEFIDAV 233 FAQ LE+ CV TVESG MTKDLA +HG S V ++ +LNT +F+D + Sbjct: 393 RFAQMLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTTDFLDTI 441 Score = 65.1 bits (157), Expect(2) = 2e-49 Identities = 29/35 (82%), Positives = 31/35 (88%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 G+VWACKNYDGDVQSD LAQGFGSLGLMTS + P Sbjct: 303 GFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCP 337
>IDHC_MOUSE (O88844) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 155 bits (392), Expect(2) = 2e-49 Identities = 74/106 (69%), Positives = 88/106 (83%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+CPDGKT+EAEAAHGTVTRH+R++QKG ETSTN IASIFAW+RGLAHRAKLD+N L Sbjct: 294 VLICPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELS 353 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFID 239 FA+ LE+ C+ T+E+G MTKDLA + G V RSDYLNT EF+D Sbjct: 354 FFAKALEDVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMD 399 Score = 60.8 bits (146), Expect(2) = 2e-49 Identities = 25/35 (71%), Positives = 31/35 (88%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 G++WACKNYDGDVQSD +AQG+GSLG+MTS + P Sbjct: 264 GFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICP 298
>IDHC_HUMAN (O75874) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 154 bits (388), Expect(2) = 4e-49 Identities = 75/106 (70%), Positives = 86/106 (81%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+CPDGKT+EAEAAHGTVTRH+R++QKG ETSTN IASIFAWTRGLAHRAKLD+N L Sbjct: 294 VLVCPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWTRGLAHRAKLDNNKELA 353 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFID 239 FA LEE + T+E+G MTKDLA + G V RSDYLNT EF+D Sbjct: 354 FFANALEEVSIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMD 399 Score = 60.8 bits (146), Expect(2) = 4e-49 Identities = 25/35 (71%), Positives = 31/35 (88%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 G++WACKNYDGDVQSD +AQG+GSLG+MTS + P Sbjct: 264 GFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCP 298
>IDH_MYCTU (P65097) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 138 bits (348), Expect(2) = 5e-45 Identities = 69/109 (63%), Positives = 82/109 (75%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VLM DGKT+EAEAAHGTVTRH+R +Q G TSTN IASIFAWTRGL HR KLD ++ Sbjct: 297 VLMTADGKTVEAEAAHGTVTRHYRQYQAGKPTSTNPIASIFAWTRGLQHRGKLDGTPEVI 356 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVA 230 +FA KLE + TVESGKMTKDLA+L+ D+LN+EEF+DA+A Sbjct: 357 DFAHKLESVVIATVESGKMTKDLAILIG-----PEQDWLNSEEFLDAIA 400 Score = 62.8 bits (151), Expect(2) = 5e-45 Identities = 27/30 (90%), Positives = 29/30 (96%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTS 558 GYVWACKNYDGDVQSD +AQG+GSLGLMTS Sbjct: 267 GYVWACKNYDGDVQSDTVAQGYGSLGLMTS 296
>IDH_MYCBO (P65098) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 138 bits (348), Expect(2) = 5e-45 Identities = 69/109 (63%), Positives = 82/109 (75%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VLM DGKT+EAEAAHGTVTRH+R +Q G TSTN IASIFAWTRGL HR KLD ++ Sbjct: 297 VLMTADGKTVEAEAAHGTVTRHYRQYQAGKPTSTNPIASIFAWTRGLQHRGKLDGTPEVI 356 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVA 230 +FA KLE + TVESGKMTKDLA+L+ D+LN+EEF+DA+A Sbjct: 357 DFAHKLESVVIATVESGKMTKDLAILIG-----PEQDWLNSEEFLDAIA 400 Score = 62.8 bits (151), Expect(2) = 5e-45 Identities = 27/30 (90%), Positives = 29/30 (96%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTS 558 GYVWACKNYDGDVQSD +AQG+GSLGLMTS Sbjct: 267 GYVWACKNYDGDVQSDTVAQGYGSLGLMTS 296
>IDHP_MOUSE (P54071) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 523 Score = 140 bits (354), Expect(2) = 6e-45 Identities = 72/109 (66%), Positives = 83/109 (76%), Gaps = 1/109 (0%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+CPDGKTIEAEAAHGTVTRH+R HQKG TST IASIFAWTRGL HR KLD N L+ Sbjct: 405 VLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTKGIASIFAWTRGLEHRGKLDGNQDLI 464 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSD-YLNTEEFIDAV 233 FAQ E+ CV TVE G MTKDLA +HG S V ++ +LNT +F+D + Sbjct: 465 RFAQTREKVCVQTVE-GAMTKDLAGCIHGLSNVKLNEHFLNTTDFLDTI 512 Score = 60.1 bits (144), Expect(2) = 6e-45 Identities = 27/35 (77%), Positives = 29/35 (82%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 G+VWACKNYDGDVQSD LA FGSLGLMTS + P Sbjct: 375 GFVWACKNYDGDVQSDILASRFGSLGLMTSVLVCP 409
>IDH1_CANTR (O13285) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (CtIDP1) Length = 430 Score = 134 bits (336), Expect(2) = 6e-42 Identities = 71/109 (65%), Positives = 83/109 (76%), Gaps = 1/109 (0%) Frame = -2 Query: 553 LMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLE 374 LM PDGK EAEAAHGTVTRH+R HQ+G ETSTNSIASIFAWTRGLA R KLD+ +++ Sbjct: 320 LMTPDGKAYEAEAAHGTVTRHYRQHQQGKETSTNSIASIFAWTRGLAQRGKLDETPDVVD 379 Query: 373 FAQKLEEACVGTVESGK-MTKDLALLVHGSSKVTRSDYLNTEEFIDAVA 230 FA KLE+A + TVE + MTKDLAL + K RS Y+ T EF+DAVA Sbjct: 380 FASKLEQATIDTVEVDRIMTKDLALAM---GKTDRSAYVTTTEFLDAVA 425 Score = 57.0 bits (136), Expect(2) = 6e-42 Identities = 26/35 (74%), Positives = 29/35 (82%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 G+V A KNYDGDVQSD +AQGFGSLGLMTS + P Sbjct: 289 GFVMALKNYDGDVQSDIVAQGFGSLGLMTSALMTP 323
>IDHC_YEAST (P41939) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 412 Score = 133 bits (335), Expect(2) = 3e-41 Identities = 72/109 (66%), Positives = 83/109 (76%), Gaps = 1/109 (0%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+ PDGKT E+EAAHGTVTRHFR HQ+G ETSTNSIASIFAWTRG+ R KLD+ ++ Sbjct: 294 VLITPDGKTFESEAAHGTVTRHFRQHQQGKETSTNSIASIFAWTRGIIQRGKLDNTPDVV 353 Query: 376 EFAQKLEEACVGTV-ESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAV 233 +F Q LE A V TV E G MTKDLAL++ K RS Y+ TEEFIDAV Sbjct: 354 KFGQILESATVNTVQEDGIMTKDLALIL---GKSERSAYVTTEEFIDAV 399 Score = 55.1 bits (131), Expect(2) = 3e-41 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 GY+ A KNYDGDV+SD +AQGFGSLGLMTS + P Sbjct: 264 GYIIAMKNYDGDVESDIVAQGFGSLGLMTSVLITP 298
>IDH_SPHYA (P50215) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 406 Score = 128 bits (322), Expect(2) = 3e-41 Identities = 62/108 (57%), Positives = 80/108 (74%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+ PDGKT+EAEAAHGTVTRH+R HQ+G TSTN IASIFAWT+GL+ R K DD ++ Sbjct: 292 VLLSPDGKTVEAEAAHGTVTRHYRQHQQGKATSTNPIASIFAWTQGLSFRGKFDDTPDVV 351 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAV 233 +FA+ LE+ C+ TVE G MTKDLALL+ ++ TE+F +A+ Sbjct: 352 KFAETLEQVCIKTVEGGAMTKDLALLIGPDQA-----WMTTEQFFEAI 394 Score = 60.1 bits (144), Expect(2) = 3e-41 Identities = 26/29 (89%), Positives = 28/29 (96%) Frame = -1 Query: 644 YVWACKNYDGDVQSDFLAQGFGSLGLMTS 558 +VWACKNYDGDVQSD +AQGFGSLGLMTS Sbjct: 263 FVWACKNYDGDVQSDTVAQGFGSLGLMTS 291
>IDH2_CANTR (O13294) Isocitrate dehydrogenase [NADP] peroxisomal (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (PS-NADP-IDH) (CtIDP2) Length = 410 Score = 130 bits (327), Expect(2) = 1e-40 Identities = 68/110 (61%), Positives = 81/110 (73%), Gaps = 1/110 (0%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+ PDGK E+EAAHGTVTRH+R HQ+G ETSTNSIASI+AWTRGL R KLDD ++ Sbjct: 295 VLVTPDGKAFESEAAHGTVTRHYRQHQQGKETSTNSIASIYAWTRGLIQRGKLDDTPEVV 354 Query: 376 EFAQKLEEACVGTVESGK-MTKDLALLVHGSSKVTRSDYLNTEEFIDAVA 230 +FA++LE+A + TV MTKDLAL K RS Y+ TEEFID VA Sbjct: 355 KFAEELEKAVIETVSKDNIMTKDLALT---QGKTDRSSYVTTEEFIDGVA 401 Score = 56.2 bits (134), Expect(2) = 1e-40 Identities = 26/35 (74%), Positives = 29/35 (82%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 GY+ A KNYDGDVQSD +AQGFGSLGLMTS + P Sbjct: 265 GYIIAMKNYDGDVQSDIVAQGFGSLGLMTSVLVTP 299
>IDHH_YEAST (P53982) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 420 Score = 132 bits (331), Expect(2) = 1e-40 Identities = 68/110 (61%), Positives = 83/110 (75%), Gaps = 1/110 (0%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 +L+ PDGKT E+EAAHGTVTRHFR HQ+G ETSTNSIASIFAWTR + R KLD+ ++ Sbjct: 294 ILITPDGKTFESEAAHGTVTRHFRKHQRGEETSTNSIASIFAWTRAIIQRGKLDNTDDVI 353 Query: 376 EFAQKLEEACVGTVE-SGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVA 230 +F LE+A + TV+ GKMTKDLAL++ K RS Y+ TEEFID VA Sbjct: 354 KFGNLLEKATLDTVQVGGKMTKDLALML---GKTNRSSYVTTEEFIDEVA 400 Score = 54.3 bits (129), Expect(2) = 1e-40 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 G++ A KNYDGDVQSD +AQGFGSLGLMTS + P Sbjct: 264 GFIIAMKNYDGDVQSDIVAQGFGSLGLMTSILITP 298
>IDHP_SCHPO (O14254) Probable isocitrate dehydrogenase [NADP], mitochondrial| precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 418 Score = 125 bits (315), Expect(2) = 1e-39 Identities = 66/111 (59%), Positives = 82/111 (73%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 VL+ P+G+T E+EAAHGTV RH+ + KG +TSTNSIASIFAWTRGLAHR +LD N RL+ Sbjct: 304 VLIHPNGRTFESEAAHGTVQRHYMQYLKGKKTSTNSIASIFAWTRGLAHRGRLDGNERLV 363 Query: 376 EFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAVAAE 224 +FA LE ACV VE G MTKDL LL + + Y++T EF+DAV +E Sbjct: 364 KFANALEHACVRCVEKGIMTKDLYLL-----SKSPNGYVDTFEFLDAVKSE 409 Score = 57.4 bits (137), Expect(2) = 1e-39 Identities = 24/30 (80%), Positives = 27/30 (90%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTS 558 G+VWACKNYDGDV SD +AQ +GSLGLMTS Sbjct: 274 GFVWACKNYDGDVMSDVVAQAYGSLGLMTS 303
>IDHP_YEAST (P21954) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 428 Score = 122 bits (307), Expect(2) = 5e-38 Identities = 66/109 (60%), Positives = 80/109 (73%), Gaps = 1/109 (0%) Frame = -2 Query: 556 VLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLL 377 +L+ PDGKT E+EAAHGTVTRH+R +QKG ETSTNSIASIFAW+RGL R +LD+ L Sbjct: 311 ILVTPDGKTFESEAAHGTVTRHYRKYQKGEETSTNSIASIFAWSRGLLKRGELDNTPALC 370 Query: 376 EFAQKLEEACVGTV-ESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAV 233 +FA LE A + TV + G MTKDLAL + RS Y+ TEEF+DAV Sbjct: 371 KFANILESATLNTVQQDGIMTKDLALACGNNE---RSAYVTTEEFLDAV 416 Score = 55.1 bits (131), Expect(2) = 5e-38 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 G++ A KNYDGDVQSD +AQGFGSLGLMTS + P Sbjct: 281 GFIMALKNYDGDVQSDIVAQGFGSLGLMTSILVTP 315
>IDHP_ASPNG (P79089) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 498 Score = 112 bits (281), Expect(2) = 2e-35 Identities = 59/108 (54%), Positives = 75/108 (69%), Gaps = 1/108 (0%) Frame = -2 Query: 553 LMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLE 374 L+ P G+ E+EAAHGTVTRH+R HQKG ETSTN IASIFAWTRGL R KLD+ ++ Sbjct: 382 LVTPTGEAFESEAAHGTVTRHYREHQKGRETSTNPIASIFAWTRGLIQRGKLDETPDVVT 441 Query: 373 FAQKLEEACVGTV-ESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDAV 233 FA++LE AC+ V + G MTKDLAL + R ++ T E++ AV Sbjct: 442 FAEELERACIEVVNDEGIMTKDLAL---ACGRKEREAWVTTREYMAAV 486 Score = 56.2 bits (134), Expect(2) = 2e-35 Identities = 26/35 (74%), Positives = 29/35 (82%) Frame = -1 Query: 647 GYVWACKNYDGDVQSDFLAQGFGSLGLMTSGIDVP 543 G+V A KNYDGDVQSD +AQGFGSLGLMTS + P Sbjct: 351 GFVMALKNYDGDVQSDIVAQGFGSLGLMTSTLVTP 385
>LEU3_PHOPR (Q6LV25) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 362 Score = 26.2 bits (56), Expect(2) = 0.85 Identities = 23/81 (28%), Positives = 38/81 (46%) Frame = -2 Query: 469 GETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHG 290 G+ N +A I + L R LD+ + A+ +E+A +E+G++T DLA Sbjct: 292 GKNIANPVAQILS--AALMLRYSLDEE----KAARAIEQAVSQALEAGELTADLA----- 340 Query: 289 SSKVTRSDYLNTEEFIDAVAA 227 + L+T E D +AA Sbjct: 341 ----GKGAALSTSEMGDKIAA 357 Score = 25.4 bits (54), Expect(2) = 0.85 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -1 Query: 641 VWACKNYDGDVQSDFLAQGFGSLGLMTS 558 V C N GD+ SD A GS+G++ S Sbjct: 242 VMLCSNIFGDIISDECAMITGSMGMLPS 269
>LEU3_LEPIN (P24015) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 358 Score = 26.2 bits (56), Expect(2) = 3.8 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = -2 Query: 469 GETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLA 305 G+ N IA + + L + +++ A K+E A T+ SGK T+D+A Sbjct: 290 GKGVANPIAQVLSAALMLRYSFSMEEEAN------KIETAVRKTIASGKRTRDIA 338 Score = 23.1 bits (48), Expect(2) = 3.8 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -1 Query: 632 CKNYDGDVQSDFLAQGFGSLGLMTS 558 C+N GD+ SD + GS+G++ S Sbjct: 243 CENMFGDILSDEASIITGSIGMLPS 267
>LEU3_LEPIC (Q72RH7) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 358 Score = 26.2 bits (56), Expect(2) = 3.8 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = -2 Query: 469 GETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLA 305 G+ N IA + + L + +++ A K+E A T+ SGK T+D+A Sbjct: 290 GKGVANPIAQVLSAALMLRYSFSMEEEAN------KIETAVRKTIASGKRTRDIA 338 Score = 23.1 bits (48), Expect(2) = 3.8 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -1 Query: 632 CKNYDGDVQSDFLAQGFGSLGLMTS 558 C+N GD+ SD + GS+G++ S Sbjct: 243 CENMFGDILSDEASIITGSIGMLPS 267
>INHBA_SHEEP (P43032) Inhibin beta A chain precursor (Activin beta-A chain)| Length = 425 Score = 30.4 bits (67), Expect = 4.7 Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Frame = -2 Query: 523 AEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTR-GLAHRAKLDDNARLLEFAQKLEEAC 347 AE+ T HF + Q+G + S A I+ + + A+R + RL + + L+ Sbjct: 127 AESGTARKTLHFEISQEGSDLSVVERAEIWLFLKVPKANRTRSKVTIRLFQQQKHLQ--- 183 Query: 346 VGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDA 236 G++++G+ +++ L K +S+ L +E+ +DA Sbjct: 184 -GSLDAGEEAEEVGL------KGEKSEMLISEKVVDA 213
>IDH3A_RAT (Q99NA5) Isocitrate dehydrogenase [NAD] subunit alpha,| mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH) Length = 366 Score = 30.0 bits (66), Expect = 6.2 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Frame = -2 Query: 520 EAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVG 341 E+ HGT G+ N A + + L H L + A K+E AC Sbjct: 287 ESVHGTAP------DIAGKDMANPTALLLSAVMMLRHMG-------LFDHAAKIEAACFA 333 Query: 340 TVESGK-MTKDLALLVHGSSKVTRSDYLNTEE 248 T++ GK +TKDL G+SK SD+ TEE Sbjct: 334 TIKDGKSLTKDLG----GNSKC--SDF--TEE 357
>IDH3A_BOVIN (P41563) Isocitrate dehydrogenase [NAD] subunit alpha,| mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH) (Isocitrate dehydrogenase subunits 3/4) Length = 366 Score = 30.0 bits (66), Expect = 6.2 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Frame = -2 Query: 520 EAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVG 341 E+ HGT G+ N A + + L H L + A K+E AC Sbjct: 287 ESVHGTAP------DIAGKDMANPTALLLSAVMMLRHMG-------LFDHAAKIETACFA 333 Query: 340 TVESGK-MTKDLALLVHGSSKVTRSDYLNTEE 248 T++ GK +TKDL G+SK SD+ TEE Sbjct: 334 TIKDGKSLTKDLG----GNSKC--SDF--TEE 357
>Y1185_METJA (Q58585) Hypothetical protein MJ1185| Length = 622 Score = 30.0 bits (66), Expect = 6.2 Identities = 22/62 (35%), Positives = 34/62 (54%) Frame = -3 Query: 543 LMVKQSKPKLPMAQSLVISVFTRKVVKPAQTALLPSLLGQEDLHTGQS*TTTLDFLNLHR 364 L+V+ K +LP+ ++L I F RK +KP L+ LLG ED+ D +NL+R Sbjct: 504 LVVESIKLELPI-ENLGICRFHRKWLKPVLKELVKELLGIEDI--------VEDSINLYR 554 Query: 363 NL 358 + Sbjct: 555 EI 556
>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150) (Fragment) Length = 1324 Score = 29.6 bits (65), Expect = 8.0 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%) Frame = -2 Query: 502 VTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLE-------FAQKLEEA-- 350 VTR V + + +SI+ I+A T L +AKL D AR + F +EA Sbjct: 418 VTRFQEVFRSMWSVNGDSISKIYAGTGALEGKAKLKDGARSVSRTIQNNFFDSSKQEAID 477 Query: 349 ---CVGTVESGKMTKDLALLVHGSSKVT 275 T+ S K ALL GS +V+ Sbjct: 478 VLLLGNTLNSDLADKARALLTTGSLRVS 505
>LEU3_THEMA (Q9WZ26) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 354 Score = 26.6 bits (57), Expect(2) = 8.1 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = -2 Query: 469 GETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLA 305 G+ N IA I + L H + ++E A+K+E A +E G T+D+A Sbjct: 282 GKNIANPIAQILSLAMMLEH------SFGMVEEARKIERAVELVIEEGYRTRDIA 330 Score = 21.6 bits (44), Expect(2) = 8.1 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -1 Query: 626 NYDGDVQSDFLAQGFGSLGLMTS 558 N GD+ SD A GSLGL+ S Sbjct: 239 NMFGDILSDESAALPGSLGLLPS 261 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,333,748 Number of Sequences: 219361 Number of extensions: 1615630 Number of successful extensions: 4294 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4280 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
