| Clone Name | rbags20i23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | TPM_PERVI (Q9GZ70) Tropomyosin | 32 | 1.9 | 2 | TPM_MYTGA (P91958) Tropomyosin | 32 | 1.9 | 3 | FRIZ2_DROME (Q9VVX3) Protein frizzled-2 precursor (dFz2) | 31 | 3.3 | 4 | TPM_MYTED (Q25457) Tropomyosin | 30 | 5.6 | 5 | TPM_HALRU (Q25145) Tropomyosin | 30 | 7.3 | 6 | TPM_HALDV (Q9GZ71) Tropomyosin | 30 | 7.3 |
|---|
>TPM_PERVI (Q9GZ70) Tropomyosin| Length = 284 Score = 31.6 bits (70), Expect = 1.9 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -2 Query: 563 ETSNTEKERSLLVKISELQSRMITLTDELISAKQKHVQLQQELNALY 423 E TE ER+ +S+LQ + L DEL++ K+K+ + EL+A + Sbjct: 236 ENRATEAERT----VSKLQKEVDRLEDELLTEKEKYKAISDELDATF 278
>TPM_MYTGA (P91958) Tropomyosin| Length = 284 Score = 31.6 bits (70), Expect = 1.9 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -2 Query: 563 ETSNTEKERSLLVKISELQSRMITLTDELISAKQKHVQLQQELNALY 423 E TE ER+ +S+LQ + L DEL++ K+K+ + EL+A + Sbjct: 236 ENRATEAERT----VSKLQKEVDRLEDELLTEKEKYKAISDELDATF 278
>FRIZ2_DROME (Q9VVX3) Protein frizzled-2 precursor (dFz2)| Length = 694 Score = 30.8 bits (68), Expect = 3.3 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -2 Query: 200 HQCVY*FLFSFFFGLIYSIGFWWVI 126 H C FL ++FFG+ SI WWVI Sbjct: 393 HSCTLVFLLTYFFGMASSI--WWVI 415
>TPM_MYTED (Q25457) Tropomyosin| Length = 284 Score = 30.0 bits (66), Expect = 5.6 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -2 Query: 563 ETSNTEKERSLLVKISELQSRMITLTDELISAKQKHVQLQQELNALY 423 E TE ER+ +S+L+ + L DEL++ K+K+ + EL+A + Sbjct: 236 ENRATEAERT----VSKLRKEVDRLEDELLTEKEKYKAISDELDATF 278
>TPM_HALRU (Q25145) Tropomyosin| Length = 284 Score = 29.6 bits (65), Expect = 7.3 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = -2 Query: 563 ETSNTEKERSLLVKISELQSRMITLTDELISAKQKHVQLQQELNALY 423 E TE ER+ +S+LQ + L DEL++ K+K+ + EL+ + Sbjct: 236 ENRATEAERT----VSKLQKEVDRLEDELLAEKEKYKAISDELDQTF 278
>TPM_HALDV (Q9GZ71) Tropomyosin| Length = 284 Score = 29.6 bits (65), Expect = 7.3 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = -2 Query: 563 ETSNTEKERSLLVKISELQSRMITLTDELISAKQKHVQLQQELNALY 423 E TE ER+ +S+LQ + L DEL++ K+K+ + EL+ + Sbjct: 236 ENRATEAERT----VSKLQKEVDRLEDELLAEKEKYKAISDELDQTF 278 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,756,119 Number of Sequences: 219361 Number of extensions: 1233186 Number of successful extensions: 3183 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3076 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3179 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)