ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20i17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018444.1| Zea mays clone EL01N0403C06.d mRNA sequence 182 9e-43
2ref|XM_469393.1| Oryza sativa (japonica cultivar-group), mRNA 163 9e-37
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 163 9e-37
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 163 9e-37
5gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 163 9e-37
6dbj|AK103953.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 9e-37
7dbj|AK073303.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 9e-37
8ref|NM_118359.2| Arabidopsis thaliana ATCES1 (Acyl-CoA independe... 90 1e-14
9emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, ... 90 1e-14
10emb|AL021712.2|ATT10I14 Arabidopsis thaliana DNA chromosome 4, B... 90 1e-14
11gb|BT008652.1| Arabidopsis thaliana clone RAFL09-74-E03 (R19654)... 90 1e-14
12gb|BT008549.1| Arabidopsis thaliana clone U19654 unknown protein... 90 1e-14
13gb|AY090947.1| Arabidopsis thaliana At4g22330 mRNA sequence 90 1e-14
14dbj|AB063253.1| Arabidopsis thaliana AtCES1 mRNA for Acyl-CoA in... 90 1e-14
15dbj|AP008240.1| Lotus japonicus genomic DNA, chromosome 4, clone... 74 6e-10
16gb|BT014130.1| Lycopersicon esculentum clone 133246F, mRNA sequence 66 2e-07
17emb|BX827086.1|CNS0A3AB Arabidopsis thaliana Full-length cDNA Co... 64 6e-07
18gb|AC150798.3| Medicago truncatula chromosome 2 BAC clone mth2-3... 56 1e-04
19gb|AC148915.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 56 1e-04
20gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 44 0.55
21ref|XM_630550.1| Dictyostelium discoideum hypothetical protein (... 42 2.2
22emb|BX571721.8| Zebrafish DNA sequence from clone DKEY-250L23 in... 42 2.2
23gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chrom... 42 2.2
24gb|AC009541.16|AC009541 Human Chromosome 7 clone RP11-233L24, co... 42 2.2
25emb|BX005018.8| Zebrafish DNA sequence from clone DKEY-209K18, c... 42 2.2
26emb|AL049777.5|CNS00002 Human chromosome 14 DNA sequence BAC R-9... 42 2.2
27emb|AL121766.5|CNS01DSA Human chromosome 14 DNA sequence BAC R-4... 42 2.2
28gb|AC102270.8| Mus musculus chromosome 3, clone RP24-266A23, com... 40 8.6
29ref|XM_864919.1| PREDICTED: Bos taurus similar to Ubiquitin carb... 40 8.6
30emb|CT005231.3| Pan troglodytes chromosome X clone PTB-024D11 ma... 40 8.6
31emb|CT005234.2| Pan troglodytes chromosome X clone PTB-147L24 ma... 40 8.6
32emb|CR589944.10| Zebrafish DNA sequence from clone CH211-14I3 in... 40 8.6
33emb|AL157700.13| Human DNA sequence from clone RP6-201G10 on chr... 40 8.6
34gb|AC079944.17| Homo sapiens 3 BAC RP11-435F17 (Roswell Park Can... 40 8.6
35emb|CR626905.5| Zebrafish DNA sequence from clone DKEY-85H21 in ... 40 8.6
36emb|CR382340.7| Zebrafish DNA sequence from clone DKEY-151G10 in... 40 8.6
37emb|BX293556.14| Zebrafish DNA sequence from clone DKEY-21N20 in... 40 8.6
38emb|BX572081.6| Zebrafish DNA sequence from clone DKEYP-86G5 in ... 40 8.6
39gb|AC110027.5| Homo sapiens chromosome 15, clone RP11-452K20, co... 40 8.6
40gb|AC107055.3| Homo sapiens BAC clone RP11-436G13 from 4, comple... 40 8.6
41gb|AY112989.1| Clostridium butyricum two-component sensor histid... 40 8.6
42gb|AC010842.5|AC010842 Drosophila melanogaster, chromosome 2R, r... 40 8.6
43gb|AC011308.8| Homo sapiens BAC clone RP11-522N18 from 2, comple... 40 8.6
44gb|AC011535.7|AC011535 Homo sapiens chromosome 19 clone LLNLR-24... 40 8.6
45gb|AC080032.12| Homo sapiens chromosome 15, clone RP11-349O9, co... 40 8.6
46gb|AY135690.1| Mus musculus argonaute 4 protein (Ago4) gene, com... 40 8.6
47emb|AL731764.11| Mouse DNA sequence from clone RP23-75F12 on chr... 40 8.6
48emb|BX322631.8| Zebrafish DNA sequence from clone DKEY-173L11, c... 40 8.6
49gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 40 8.6
50gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complet... 40 8.6
51gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, co... 40 8.6
52emb|AL671117.6| Mouse DNA sequence from clone RP23-278L4 on chro... 40 8.6
53emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chr... 40 8.6
54emb|AL772147.5| Mouse DNA sequence from clone RP23-368P4 on chro... 40 8.6 
>gb|BT018444.1| Zea mays clone EL01N0403C06.d mRNA sequence
          Length = 1361

 Score =  182 bits (92), Expect = 9e-43
 Identities = 176/204 (86%)
 Strand = Plus / Minus

                                                                       
Query: 418 tttctgaatcttgacgtagggcaacaatccaaataggtggatgatgcgcggctcccaccc 477
           |||||| | |||||| || ||||| |||||||  |||| | |||| | || |||||||||
Sbjct: 902 tttctggaccttgacataaggcaaaaatccaagaaggtaggtgattctcgcctcccaccc 843

                                                                       
Query: 478 acgctgctgagctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagcccat 537
            ||||||||||| || |||||||| | ||||||||||||| |||| ||||||| ||||||
Sbjct: 842 gcgctgctgagcccgacagaacattaggaatgtgtttgcatagtatgagttgaggcccat 783

                                                                       
Query: 538 gagcatatgccaccatgcatgtccctgcgggttgatgtaccagagcgaaagcttcttgca 597
            |||| |||||||||||| || ||||||||||||| ||||||  ||||||||||||||||
Sbjct: 782 aagcacatgccaccatgcgtgcccctgcgggttgacgtaccaatgcgaaagcttcttgca 723

                                   
Query: 598 gaagacgcgatcaactagccagca 621
           ||||| ||||||||||||||||||
Sbjct: 722 gaagatgcgatcaactagccagca 699



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 277  catttgtagtccgtaatcacttggaagcccatttacaaaaa 317
            ||||| ||||||||||||| ||||| |||||| ||||||||
Sbjct: 1062 catttatagtccgtaatcatttggatgcccatatacaaaaa 1022
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>ref|XM_469393.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1344

 Score =  163 bits (82), Expect = 9e-37
 Identities = 220/266 (82%)
 Strand = Plus / Minus

                                                                        
Query: 367  ggtcctggagaacaccgctgatcgacagacaacttactccctctttctggatttctgaat 426
            |||||||||||||| | ||||   | ||| |||| | |||||||||  || |||||||||
Sbjct: 1007 ggtcctggagaacagcactgacaaatagagaactcattccctcttttggggtttctgaat 948

                                                                        
Query: 427  cttgacgtagggcaacaatccaaataggtggatgatgcgcggctcccacccacgctgctg 486
            |||||| || ||||| || || || |||||| | ||    ||||||||||||||||| ||
Sbjct: 947  cttgacataaggcaagaacccgaaaaggtgggtaattttgggctcccacccacgctgttg 888

                                                                        
Query: 487  agctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagcccatgagcatatg 546
            ||||||||| ||||| |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct: 887  agctcggcaaaacattaagaatgtgtttgcaaagtatgagttaaatcccatgagaatatg 828

                                                                        
Query: 547  ccaccatgcatgtccctgcgggttgatgtaccagagcgaaagcttcttgcagaagacgcg 606
            ||||||||| || || || ||||||| ||||||  | ||||||||||| ||||| |  ||
Sbjct: 827  ccaccatgcgtgcccttgtgggttgacgtaccaatgtgaaagcttcttacagaacattcg 768

                                      
Query: 607  atcaactagccagcaaactgtcgcca 632
            ||||| |||||||||||  |||||||
Sbjct: 767  atcaaatagccagcaaagagtcgcca 742



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                  
Query: 281  tgtagtccgtaatcacttggaagcccatttacaaaaaa 318
            |||||||||||||||||||||||||||| |||||||||
Sbjct: 1090 tgtagtccgtaatcacttggaagcccatatacaaaaaa 1053



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 52/58 (89%), Gaps = 2/58 (3%)
 Strand = Plus / Minus

                                                                      
Query: 205  aagtatggtacaaaacagggcgttagttaaaaagttaccaaaatcaattgagacatca 262
            ||||||||||||||||| |||||||||| |||||||| ||||||| | |||| |||||
Sbjct: 1152 aagtatggtacaaaaca-ggcgttagtt-aaaagttaacaaaatctagtgaggcatca 1097
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  163 bits (82), Expect = 9e-37
 Identities = 220/266 (82%)
 Strand = Plus / Plus

                                                                            
Query: 367      ggtcctggagaacaccgctgatcgacagacaacttactccctctttctggatttctgaat 426
                |||||||||||||| | ||||   | ||| |||| | |||||||||  || |||||||||
Sbjct: 27723966 ggtcctggagaacagcactgacaaatagagaactcattccctcttttggggtttctgaat 27724025

                                                                            
Query: 427      cttgacgtagggcaacaatccaaataggtggatgatgcgcggctcccacccacgctgctg 486
                |||||| || ||||| || || || |||||| | ||    ||||||||||||||||| ||
Sbjct: 27724026 cttgacataaggcaagaacccgaaaaggtgggtaattttgggctcccacccacgctgttg 27724085

                                                                            
Query: 487      agctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagcccatgagcatatg 546
                ||||||||| ||||| |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct: 27724086 agctcggcaaaacattaagaatgtgtttgcaaagtatgagttaaatcccatgagaatatg 27724145

                                                                            
Query: 547      ccaccatgcatgtccctgcgggttgatgtaccagagcgaaagcttcttgcagaagacgcg 606
                ||||||||| || || || ||||||| ||||||  | ||||||||||| ||||| |  ||
Sbjct: 27724146 ccaccatgcgtgcccttgtgggttgacgtaccaatgtgaaagcttcttacagaacattcg 27724205

                                          
Query: 607      atcaactagccagcaaactgtcgcca 632
                ||||| |||||||||||  |||||||
Sbjct: 27724206 atcaaatagccagcaaagagtcgcca 27724231



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                      
Query: 281      tgtagtccgtaatcacttggaagcccatttacaaaaaa 318
                |||||||||||||||||||||||||||| |||||||||
Sbjct: 27723883 tgtagtccgtaatcacttggaagcccatatacaaaaaa 27723920



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 52/58 (89%), Gaps = 2/58 (3%)
 Strand = Plus / Plus

                                                                          
Query: 205      aagtatggtacaaaacagggcgttagttaaaaagttaccaaaatcaattgagacatca 262
                ||||||||||||||||| |||||||||| |||||||| ||||||| | |||| |||||
Sbjct: 27723821 aagtatggtacaaaaca-ggcgttagtt-aaaagttaacaaaatctagtgaggcatca 27723876
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  163 bits (82), Expect = 9e-37
 Identities = 220/266 (82%)
 Strand = Plus / Plus

                                                                            
Query: 367      ggtcctggagaacaccgctgatcgacagacaacttactccctctttctggatttctgaat 426
                |||||||||||||| | ||||   | ||| |||| | |||||||||  || |||||||||
Sbjct: 27815289 ggtcctggagaacagcactgacaaatagagaactcattccctcttttggggtttctgaat 27815348

                                                                            
Query: 427      cttgacgtagggcaacaatccaaataggtggatgatgcgcggctcccacccacgctgctg 486
                |||||| || ||||| || || || |||||| | ||    ||||||||||||||||| ||
Sbjct: 27815349 cttgacataaggcaagaacccgaaaaggtgggtaattttgggctcccacccacgctgttg 27815408

                                                                            
Query: 487      agctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagcccatgagcatatg 546
                ||||||||| ||||| |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct: 27815409 agctcggcaaaacattaagaatgtgtttgcaaagtatgagttaaatcccatgagaatatg 27815468

                                                                            
Query: 547      ccaccatgcatgtccctgcgggttgatgtaccagagcgaaagcttcttgcagaagacgcg 606
                ||||||||| || || || ||||||| ||||||  | ||||||||||| ||||| |  ||
Sbjct: 27815469 ccaccatgcgtgcccttgtgggttgacgtaccaatgtgaaagcttcttacagaacattcg 27815528

                                          
Query: 607      atcaactagccagcaaactgtcgcca 632
                ||||| |||||||||||  |||||||
Sbjct: 27815529 atcaaatagccagcaaagagtcgcca 27815554



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                      
Query: 281      tgtagtccgtaatcacttggaagcccatttacaaaaaa 318
                |||||||||||||||||||||||||||| |||||||||
Sbjct: 27815206 tgtagtccgtaatcacttggaagcccatatacaaaaaa 27815243



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 52/58 (89%), Gaps = 2/58 (3%)
 Strand = Plus / Plus

                                                                          
Query: 205      aagtatggtacaaaacagggcgttagttaaaaagttaccaaaatcaattgagacatca 262
                ||||||||||||||||| |||||||||| |||||||| ||||||| | |||| |||||
Sbjct: 27815144 aagtatggtacaaaaca-ggcgttagtt-aaaagttaacaaaatctagtgaggcatca 27815199
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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score =  163 bits (82), Expect = 9e-37
 Identities = 220/266 (82%)
 Strand = Plus / Minus

                                                                         
Query: 367   ggtcctggagaacaccgctgatcgacagacaacttactccctctttctggatttctgaat 426
             |||||||||||||| | ||||   | ||| |||| | |||||||||  || |||||||||
Sbjct: 89928 ggtcctggagaacagcactgacaaatagagaactcattccctcttttggggtttctgaat 89869

                                                                         
Query: 427   cttgacgtagggcaacaatccaaataggtggatgatgcgcggctcccacccacgctgctg 486
             |||||| || ||||| || || || |||||| | ||    ||||||||||||||||| ||
Sbjct: 89868 cttgacataaggcaagaacccgaaaaggtgggtaattttgggctcccacccacgctgttg 89809

                                                                         
Query: 487   agctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagcccatgagcatatg 546
             ||||||||| ||||| |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct: 89808 agctcggcaaaacattaagaatgtgtttgcaaagtatgagttaaatcccatgagaatatg 89749

                                                                         
Query: 547   ccaccatgcatgtccctgcgggttgatgtaccagagcgaaagcttcttgcagaagacgcg 606
             ||||||||| || || || ||||||| ||||||  | ||||||||||| ||||| |  ||
Sbjct: 89748 ccaccatgcgtgcccttgtgggttgacgtaccaatgtgaaagcttcttacagaacattcg 89689

                                       
Query: 607   atcaactagccagcaaactgtcgcca 632
             ||||| |||||||||||  |||||||
Sbjct: 89688 atcaaatagccagcaaagagtcgcca 89663



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                   
Query: 281   tgtagtccgtaatcacttggaagcccatttacaaaaaa 318
             |||||||||||||||||||||||||||| |||||||||
Sbjct: 90011 tgtagtccgtaatcacttggaagcccatatacaaaaaa 89974



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 52/58 (89%), Gaps = 2/58 (3%)
 Strand = Plus / Minus

                                                                       
Query: 205   aagtatggtacaaaacagggcgttagttaaaaagttaccaaaatcaattgagacatca 262
             ||||||||||||||||| |||||||||| |||||||| ||||||| | |||| |||||
Sbjct: 90073 aagtatggtacaaaaca-ggcgttagtt-aaaagttaacaaaatctagtgaggcatca 90018
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>dbj|AK103953.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-G02, full
            insert sequence
          Length = 1313

 Score =  163 bits (82), Expect = 9e-37
 Identities = 220/266 (82%)
 Strand = Plus / Minus

                                                                        
Query: 367  ggtcctggagaacaccgctgatcgacagacaacttactccctctttctggatttctgaat 426
            |||||||||||||| | ||||   | ||| |||| | |||||||||  || |||||||||
Sbjct: 1003 ggtcctggagaacagcactgacaaatagagaactcattccctcttttggggtttctgaat 944

                                                                        
Query: 427  cttgacgtagggcaacaatccaaataggtggatgatgcgcggctcccacccacgctgctg 486
            |||||| || ||||| || || || |||||| | ||    ||||||||||||||||| ||
Sbjct: 943  cttgacataaggcaagaacccgaaaaggtgggtaattttgggctcccacccacgctgttg 884

                                                                        
Query: 487  agctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagcccatgagcatatg 546
            ||||||||| ||||| |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct: 883  agctcggcaaaacattaagaatgtgtttgcaaagtatgagttaaatcccatgagaatatg 824

                                                                        
Query: 547  ccaccatgcatgtccctgcgggttgatgtaccagagcgaaagcttcttgcagaagacgcg 606
            ||||||||| || || || ||||||| ||||||  | ||||||||||| ||||| |  ||
Sbjct: 823  ccaccatgcgtgcccttgtgggttgacgtaccaatgtgaaagcttcttacagaacattcg 764

                                      
Query: 607  atcaactagccagcaaactgtcgcca 632
            ||||| |||||||||||  |||||||
Sbjct: 763  atcaaatagccagcaaagagtcgcca 738



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                  
Query: 281  tgtagtccgtaatcacttggaagcccatttacaaaaaa 318
            |||||||||||||||||||||||||||| |||||||||
Sbjct: 1086 tgtagtccgtaatcacttggaagcccatatacaaaaaa 1049



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 52/58 (89%), Gaps = 2/58 (3%)
 Strand = Plus / Minus

                                                                      
Query: 205  aagtatggtacaaaacagggcgttagttaaaaagttaccaaaatcaattgagacatca 262
            ||||||||||||||||| |||||||||| |||||||| ||||||| | |||| |||||
Sbjct: 1148 aagtatggtacaaaaca-ggcgttagtt-aaaagttaacaaaatctagtgaggcatca 1093
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>dbj|AK073303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P22, full
            insert sequence
          Length = 1335

 Score =  163 bits (82), Expect = 9e-37
 Identities = 220/266 (82%)
 Strand = Plus / Minus

                                                                        
Query: 367  ggtcctggagaacaccgctgatcgacagacaacttactccctctttctggatttctgaat 426
            |||||||||||||| | ||||   | ||| |||| | |||||||||  || |||||||||
Sbjct: 1025 ggtcctggagaacagcactgacaaatagagaactcattccctcttttggggtttctgaat 966

                                                                        
Query: 427  cttgacgtagggcaacaatccaaataggtggatgatgcgcggctcccacccacgctgctg 486
            |||||| || ||||| || || || |||||| | ||    ||||||||||||||||| ||
Sbjct: 965  cttgacataaggcaagaacccgaaaaggtgggtaattttgggctcccacccacgctgttg 906

                                                                        
Query: 487  agctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagcccatgagcatatg 546
            ||||||||| ||||| |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct: 905  agctcggcaaaacattaagaatgtgtttgcaaagtatgagttaaatcccatgagaatatg 846

                                                                        
Query: 547  ccaccatgcatgtccctgcgggttgatgtaccagagcgaaagcttcttgcagaagacgcg 606
            ||||||||| || || || ||||||| ||||||  | ||||||||||| ||||| |  ||
Sbjct: 845  ccaccatgcgtgcccttgtgggttgacgtaccaatgtgaaagcttcttacagaacattcg 786

                                      
Query: 607  atcaactagccagcaaactgtcgcca 632
            ||||| |||||||||||  |||||||
Sbjct: 785  atcaaatagccagcaaagagtcgcca 760



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                  
Query: 281  tgtagtccgtaatcacttggaagcccatttacaaaaaa 318
            |||||||||||||||||||||||||||| |||||||||
Sbjct: 1108 tgtagtccgtaatcacttggaagcccatatacaaaaaa 1071



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 52/58 (89%), Gaps = 2/58 (3%)
 Strand = Plus / Minus

                                                                      
Query: 205  aagtatggtacaaaacagggcgttagttaaaaagttaccaaaatcaattgagacatca 262
            ||||||||||||||||| |||||||||| |||||||| ||||||| | |||| |||||
Sbjct: 1170 aagtatggtacaaaaca-ggcgttagtt-aaaagttaacaaaatctagtgaggcatca 1115
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>ref|NM_118359.2| Arabidopsis thaliana ATCES1 (Acyl-CoA independent ceramide
           synthase); catalytic/ hydrolase, acting on
           carbon-nitrogen (but not peptide) bonds, in li>
           AT4G22330 (ATCES1) mRNA, complete cds
          Length = 1309

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                       
Query: 476 ccacgctgctgagctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagccc 535
           ||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||| | |
Sbjct: 929 ccacgttgctgagctctgcagaacatcaagaatgtgtttgcgcagtaagagttgaaactc 870

                                        
Query: 536 atgagcatatgccaccatgcatgtccctg 564
           |||| || |||||||   |||||||||||
Sbjct: 869 atgaacacatgccacagagcatgtccctg 841
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>emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 57
          Length = 199577

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                         
Query: 476   ccacgctgctgagctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagccc 535
             ||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||| | |
Sbjct: 36183 ccacgttgctgagctctgcagaacatcaagaatgtgtttgcgcagtaagagttgaaactc 36124

                                          
Query: 536   atgagcatatgccaccatgcatgtccctg 564
             |||| || |||||||   |||||||||||
Sbjct: 36123 atgaacacatgccacagagcatgtccctg 36095
to top
>emb|AL021712.2|ATT10I14 Arabidopsis thaliana DNA chromosome 4, BAC clone T10I14 (ESSA project)
          Length = 82891

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                         
Query: 476   ccacgctgctgagctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagccc 535
             ||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||| | |
Sbjct: 70088 ccacgttgctgagctctgcagaacatcaagaatgtgtttgcgcagtaagagttgaaactc 70029

                                          
Query: 536   atgagcatatgccaccatgcatgtccctg 564
             |||| || |||||||   |||||||||||
Sbjct: 70028 atgaacacatgccacagagcatgtccctg 70000
to top
>gb|BT008652.1| Arabidopsis thaliana clone RAFL09-74-E03 (R19654) unknown protein
           (At4g22330) mRNA, complete cds
          Length = 1204

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                       
Query: 476 ccacgctgctgagctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagccc 535
           ||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||| | |
Sbjct: 888 ccacgttgctgagctctgcagaacatcaagaatgtgtttgcgcagtaagagttgaaactc 829

                                        
Query: 536 atgagcatatgccaccatgcatgtccctg 564
           |||| || |||||||   |||||||||||
Sbjct: 828 atgaacacatgccacagagcatgtccctg 800
to top
>gb|BT008549.1| Arabidopsis thaliana clone U19654 unknown protein (At4g22330) mRNA,
           complete cds
          Length = 799

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                       
Query: 476 ccacgctgctgagctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagccc 535
           ||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||| | |
Sbjct: 695 ccacgttgctgagctctgcagaacatcaagaatgtgtttgcgcagtaagagttgaaactc 636

                                        
Query: 536 atgagcatatgccaccatgcatgtccctg 564
           |||| || |||||||   |||||||||||
Sbjct: 635 atgaacacatgccacagagcatgtccctg 607
to top
>gb|AY090947.1| Arabidopsis thaliana At4g22330 mRNA sequence
          Length = 1193

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                       
Query: 476 ccacgctgctgagctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagccc 535
           ||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||| | |
Sbjct: 888 ccacgttgctgagctctgcagaacatcaagaatgtgtttgcgcagtaagagttgaaactc 829

                                        
Query: 536 atgagcatatgccaccatgcatgtccctg 564
           |||| || |||||||   |||||||||||
Sbjct: 828 atgaacacatgccacagagcatgtccctg 800
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>dbj|AB063253.1| Arabidopsis thaliana AtCES1 mRNA for Acyl-CoA independent ceramide
           synthase, complete cds
          Length = 1235

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                       
Query: 476 ccacgctgctgagctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagccc 535
           ||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||| | |
Sbjct: 929 ccacgttgctgagctctgcagaacatcaagaatgtgtttgcgcagtaagagttgaaactc 870

                                        
Query: 536 atgagcatatgccaccatgcatgtccctg 564
           |||| || |||||||   |||||||||||
Sbjct: 869 atgaacacatgccacagagcatgtccctg 841
to top
>dbj|AP008240.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39G20, TM0353a,
             complete sequence
          Length = 78736

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                         
Query: 476   ccacgctgctgagctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagccc 535
             |||||||| ||||| ||||| ||||| | |||||||||||||||||| || ||||| |||
Sbjct: 69197 ccacgctgttgagcacggcaaaacattaggaatgtgtttgcaaagtaggaattgaaaccc 69138

                                                  
Query: 536   atgagcatatgccaccatgcatgtccctgcgggttga 572
             ||||  | ||||||| | ||||| ||||| |||||||
Sbjct: 69137 atgaaaacatgccacaaagcatgaccctgagggttga 69101
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>gb|BT014130.1| Lycopersicon esculentum clone 133246F, mRNA sequence
          Length = 1225

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 477 cacgctgctgagctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagccca 536
           |||| |||||||| |||||  ||||||||||||  ||||||||||| |||||||||||||
Sbjct: 865 cacgttgctgagcacggcaatacatcaagaatgcatttgcaaagtacgagttgaagccca 806

            
Query: 537 t 537
           |
Sbjct: 805 t 805
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>emb|BX827086.1|CNS0A3AB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB93ZD03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1137

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                       
Query: 476 ccacgctgctgagctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagccc 535
           ||||| |||||| ||| |||||||||||||||| | |||||  ||||||||||||| | |
Sbjct: 901 ccacgttgctgaactctgcagaacatcaagaatttttttgcgcagtaagagttgaaactc 842

                                       
Query: 536 atgagcatatgccaccatgcatgtccct 563
           |||| || ||||||  | ||||||||||
Sbjct: 841 atgaacacatgccaaaaagcatgtccct 814
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>gb|AC150798.3| Medicago truncatula chromosome 2 BAC clone mth2-33b11, complete sequence
          Length = 120992

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                          
Query: 476    ccacgctgctgagctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagccc 535
              ||||| || ||||| ||||| ||||||| |||||||||||||||||| || ||||  |||
Sbjct: 120466 ccacgttgttgagcacggcaaaacatcaggaatgtgtttgcaaagtaggaattgagtccc 120525

                  
Query: 536    atga 539
              ||||
Sbjct: 120526 atga 120529
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>gb|AC148915.2| Medicago truncatula chromosome 2 BAC clone mth2-12i20, complete
            sequence
          Length = 96388

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                        
Query: 476  ccacgctgctgagctcggcagaacatcaagaatgtgtttgcaaagtaagagttgaagccc 535
            ||||| || ||||| ||||| ||||||| |||||||||||||||||| || ||||  |||
Sbjct: 2260 ccacgttgttgagcacggcaaaacatcaggaatgtgtttgcaaagtaggaattgagtccc 2319

                
Query: 536  atga 539
            ||||
Sbjct: 2320 atga 2323
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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 164     aagtacgggacgaacactccag 185
               ||||||||||||||||||||||
Sbjct: 2560838 aagtacgggacgaacactccag 2560859
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>ref|XM_630550.1| Dictyostelium discoideum hypothetical protein (DDB0188946), partial
            mRNA
          Length = 2238

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 233  aaaaagttaccaaaatcaatt 253
            |||||||||||||||||||||
Sbjct: 1640 aaaaagttaccaaaatcaatt 1620
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>emb|BX571721.8| Zebrafish DNA sequence from clone DKEY-250L23 in linkage group 8,
             complete sequence
          Length = 168402

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 495   agaacatcaagaatgtgtttg 515
             |||||||||||||||||||||
Sbjct: 61909 agaacatcaagaatgtgtttg 61889
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>gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chromosome unknown,
             complete sequence
          Length = 182200

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 104   atccaaagaataaaatatcaa 124
             |||||||||||||||||||||
Sbjct: 90140 atccaaagaataaaatatcaa 90120
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>gb|AC009541.16|AC009541 Human Chromosome 7 clone RP11-233L24, complete sequence
          Length = 150467

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 64     taagttaaaactaatacaatt 84
              |||||||||||||||||||||
Sbjct: 142330 taagttaaaactaatacaatt 142350
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>emb|BX005018.8| Zebrafish DNA sequence from clone DKEY-209K18, complete sequence
          Length = 183614

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 495   agaacatcaagaatgtgtttg 515
             |||||||||||||||||||||
Sbjct: 41258 agaacatcaagaatgtgtttg 41238
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>emb|AL049777.5|CNS00002 Human chromosome 14 DNA sequence BAC R-966I7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170307

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   caaatccaaagaataaaatat 121
             |||||||||||||||||||||
Sbjct: 18685 caaatccaaagaataaaatat 18705
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>emb|AL121766.5|CNS01DSA Human chromosome 14 DNA sequence BAC R-412H8 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158064

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 101  caaatccaaagaataaaatat 121
            |||||||||||||||||||||
Sbjct: 1558 caaatccaaagaataaaatat 1538
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>gb|AC102270.8| Mus musculus chromosome 3, clone RP24-266A23, complete sequence
          Length = 185321

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    caaagaataaaatatcaagt 126
              ||||||||||||||||||||
Sbjct: 175293 caaagaataaaatatcaagt 175312
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>ref|XM_864919.1| PREDICTED: Bos taurus similar to Ubiquitin carboxyl-terminal
           hydrolase 1 (Ubiquitin thiolesterase 1)
           (Ubiquitin-specific processing protease 1)
           (Deubiquitinating enzyme 1) (hUBP), transcript variant 2
           (LOC516328), mRNA
          Length = 3821

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 346 ttggtgggcattagattttc 365
           ||||||||||||||||||||
Sbjct: 574 ttggtgggcattagattttc 593
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>emb|CT005231.3| Pan troglodytes chromosome X clone PTB-024D11 map Xq28, complete
             sequence
          Length = 179396

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   ttttctggtcctggagaaca 380
             ||||||||||||||||||||
Sbjct: 55529 ttttctggtcctggagaaca 55548
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>emb|CT005234.2| Pan troglodytes chromosome X clone PTB-147L24 map Xq28, complete sequence
          Length = 197120

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    ttttctggtcctggagaaca 380
              ||||||||||||||||||||
Sbjct: 179789 ttttctggtcctggagaaca 179808
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>emb|CR589944.10| Zebrafish DNA sequence from clone CH211-14I3 in linkage group 11,
              complete sequence
          Length = 157142

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 501    tcaagaatgtgtttgcaaag 520
              ||||||||||||||||||||
Sbjct: 132503 tcaagaatgtgtttgcaaag 132484
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>emb|AL157700.13| Human DNA sequence from clone RP6-201G10 on chromosome Xq12-13.1 Contains
              the 3' end of the OPHN1 gene for oligophrenin 1, complete
              sequence
          Length = 190611

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    ttttctggtcctggagaaca 380
              ||||||||||||||||||||
Sbjct: 158108 ttttctggtcctggagaaca 158089
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>gb|AC079944.17| Homo sapiens 3 BAC RP11-435F17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 126295

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 539   agcatatgccaccatgcatg 558
             ||||||||||||||||||||
Sbjct: 96998 agcatatgccaccatgcatg 97017
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>emb|CR626905.5| Zebrafish DNA sequence from clone DKEY-85H21 in linkage group 15,
             complete sequence
          Length = 201465

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gttaaaaagttaccaaaatc 249
             ||||||||||||||||||||
Sbjct: 15608 gttaaaaagttaccaaaatc 15627
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>emb|CR382340.7| Zebrafish DNA sequence from clone DKEY-151G10 in linkage group 23,
             complete sequence
          Length = 158509

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gttaaaaagttaccaaaatc 249
             ||||||||||||||||||||
Sbjct: 87809 gttaaaaagttaccaaaatc 87828
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>emb|BX293556.14| Zebrafish DNA sequence from clone DKEY-21N20 in linkage group 11,
              complete sequence
          Length = 212880

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     tcaagtcaaatccaaagaat 114
              ||||||||||||||||||||
Sbjct: 121721 tcaagtcaaatccaaagaat 121702
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>emb|BX572081.6| Zebrafish DNA sequence from clone DKEYP-86G5 in linkage group 11,
             complete sequence
          Length = 152148

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 501   tcaagaatgtgtttgcaaag 520
             ||||||||||||||||||||
Sbjct: 13911 tcaagaatgtgtttgcaaag 13930
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>gb|AC110027.5| Homo sapiens chromosome 15, clone RP11-452K20, complete sequence
          Length = 177770

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     ttcaaccccatttcaagtca 102
              ||||||||||||||||||||
Sbjct: 166702 ttcaaccccatttcaagtca 166721
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>gb|AC107055.3| Homo sapiens BAC clone RP11-436G13 from 4, complete sequence
          Length = 144794

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   caaatccaaagaataaaata 120
             ||||||||||||||||||||
Sbjct: 40707 caaatccaaagaataaaata 40726
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>gb|AY112989.1| Clostridium butyricum two-component sensor histidine kinase (dhaS)
            and two-component response regulator (dhaA) genes,
            complete cds; and 1,3-propanediol operon, complete
            sequence
          Length = 9071

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   aagttaaaactaatacaatt 84
            ||||||||||||||||||||
Sbjct: 2518 aagttaaaactaatacaatt 2499
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>gb|AC010842.5|AC010842 Drosophila melanogaster, chromosome 2R, region 59F5-59F8, BAC clone
             BACR02E09, complete sequence
          Length = 175118

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 486   gagctcggcagaacatcaag 505
             ||||||||||||||||||||
Sbjct: 71971 gagctcggcagaacatcaag 71990
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>gb|AC011308.8| Homo sapiens BAC clone RP11-522N18 from 2, complete sequence
          Length = 124740

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   ataaaatatcaagtcctata 132
             ||||||||||||||||||||
Sbjct: 64452 ataaaatatcaagtcctata 64433
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>gb|AC011535.7|AC011535 Homo sapiens chromosome 19 clone LLNLR-243C6, complete sequence
          Length = 37096

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 539   agcatatgccaccatgcatg 558
             ||||||||||||||||||||
Sbjct: 20927 agcatatgccaccatgcatg 20946
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>gb|AC080032.12| Homo sapiens chromosome 15, clone RP11-349O9, complete sequence
          Length = 181413

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    ttcaaccccatttcaagtca 102
             ||||||||||||||||||||
Sbjct: 84862 ttcaaccccatttcaagtca 84843
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>gb|AY135690.1| Mus musculus argonaute 4 protein (Ago4) gene, complete cds
          Length = 92047

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 536   atgagcatatgccaccatgc 555
             ||||||||||||||||||||
Sbjct: 36631 atgagcatatgccaccatgc 36612
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>emb|AL731764.11| Mouse DNA sequence from clone RP23-75F12 on chromosome X, complete
             sequence
          Length = 190219

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   ttgaaatcaagtatggtaca 216
             ||||||||||||||||||||
Sbjct: 91178 ttgaaatcaagtatggtaca 91197
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>emb|BX322631.8| Zebrafish DNA sequence from clone DKEY-173L11, complete sequence
          Length = 161710

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gttaaaaagttaccaaaatc 249
             ||||||||||||||||||||
Sbjct: 11678 gttaaaaagttaccaaaatc 11697
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>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 486    gagctcggcagaacatcaag 505
              ||||||||||||||||||||
Sbjct: 249569 gagctcggcagaacatcaag 249588
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>gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complete sequence
          Length = 232568

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 523    agagttgaagcccatgagca 542
              ||||||||||||||||||||
Sbjct: 140045 agagttgaagcccatgagca 140026
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>gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, complete sequence
          Length = 194167

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 523    agagttgaagcccatgagca 542
              ||||||||||||||||||||
Sbjct: 175782 agagttgaagcccatgagca 175763
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>emb|AL671117.6| Mouse DNA sequence from clone RP23-278L4 on chromosome X, complete
              sequence
          Length = 209799

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 345    cttggtgggcattagattttctgg 368
              ||||| ||||||||||||||||||
Sbjct: 197559 cttggagggcattagattttctgg 197536
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>emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chromosome 4, complete
             sequence
          Length = 213391

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 536   atgagcatatgccaccatgc 555
             ||||||||||||||||||||
Sbjct: 81543 atgagcatatgccaccatgc 81562
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>emb|AL772147.5| Mouse DNA sequence from clone RP23-368P4 on chromosome 4, complete
             sequence
          Length = 48596

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 484   ctgagctcggcagaacatca 503
             ||||||||||||||||||||
Sbjct: 31001 ctgagctcggcagaacatca 30982


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,844,882
Number of Sequences: 3902068
Number of extensions: 5844882
Number of successful extensions: 104529
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104345
Number of HSP's gapped (non-prelim): 166
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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