ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20i08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC137679.11| Mus musculus chromosome 12, clone RP23-302N13, c... 48 0.036
2emb|CT030189.8| Mouse DNA sequence from clone RP24-402B23 on chr... 48 0.036
3gb|AC123810.4| Mus musculus BAC clone RP24-178B17 from chromosom... 46 0.14
4gb|AC149051.4| Mus musculus BAC clone RP24-325F10 from 8, comple... 46 0.14
5gb|AC133163.2| Mus musculus chromosome 9 clone RP24-338G17, comp... 44 0.56
6gb|AC118473.20| Mus musculus chromosome 9, clone RP23-271C5, com... 44 0.56
7gb|AC166351.1| Mus musculus BAC clone RP24-224C7 from chromosome... 44 0.56
8emb|AL645667.14| Mouse DNA sequence from clone RP23-316N16 on ch... 44 0.56
9gb|AC099052.2| Homo sapiens chromosome 3 clone RP11-437M11, comp... 44 0.56
10gb|AC154544.2| Mus musculus BAC clone RP23-228G19 from chromosom... 44 0.56
11gb|AC092047.3| Homo sapiens chromosome 3 clone RP11-219I21, comp... 44 0.56
12gb|AF369907.1| Haemophilus influenzae biogroup aegyptius Iga1 pr... 42 2.2
13gb|AC137831.27| Medicago truncatula clone mth2-34o21, complete s... 42 2.2
14gb|AC020945.6| Homo sapiens chromosome 19 clone LLNLF-72H9, comp... 42 2.2
15emb|BX004888.9| Zebrafish DNA sequence from clone DKEY-8F21 in l... 42 2.2
16emb|BX294395.15| Zebrafish DNA sequence from clone CH211-220B11 ... 42 2.2
17gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome 42 2.2
18emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 42 2.2
19gb|AC153795.1| Mus musculus BAC RP23-276L17 (Roswell Park Cance... 40 8.8
20gb|AF073261.1| Sciaenops ocellatus microsatellite Soc 034 sequence 40 8.8
21gb|BC031585.1| Homo sapiens hypothetical protein MGC35338, mRNA ... 40 8.8
22emb|CR318659.26| Zebrafish DNA sequence from clone CH211-215M5 i... 40 8.8
23gb|AC109992.6| Homo sapiens 3 BAC RP11-383G6 (Roswell Park Cance... 40 8.8
24gb|AC125225.4| Mus musculus BAC clone RP23-36I17 from 6, complet... 40 8.8
25gb|AC122012.3| Mus musculus BAC clone RP24-353N4 from 5, complet... 40 8.8
26gb|AC124314.7| Mus musculus chromosome 10, clone RP23-193B6, com... 40 8.8
27emb|CR392328.18| Zebrafish DNA sequence from clone DKEYP-108C1 i... 40 8.8
28emb|CR387922.7| Zebrafish DNA sequence from clone CH211-254C11 i... 40 8.8
29emb|AL121949.13|HSDJ407E4 Human DNA sequence from clone RP3-407E... 40 8.8
30emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4,... 40 8.8
31emb|CR855397.9| Zebrafish DNA sequence from clone CH73-77E20 in ... 40 8.8
32gb|AC023508.16| Homo sapiens 3 BAC RP11-18O13 (Roswell Park Canc... 40 8.8
33gb|AC097526.3| Homo sapiens BAC clone RP11-627H22 from 4, comple... 40 8.8
34gb|AC026786.5| Homo sapiens chromosome 12 clone CTD-2140B24, com... 40 8.8
35emb|CR523956.1| Gallus gallus finished cDNA, clone ChEST690o5 40 8.8
36gb|AC104195.10| Mus musculus chromosome 5, clone RP24-95O4, comp... 40 8.8
37emb|BX510649.12| Zebrafish DNA sequence from clone CH211-158M24 ... 40 8.8
38emb|BX548256.7| Zebrafish DNA sequence from clone DKEYP-75B4 in ... 40 8.8
39gb|DQ295238.1| Uncultured marine bacterium Ant4E12, partial geno... 40 8.8
40dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
41gb|AC107208.6| Homo sapiens BAC clone RP13-487K5 from 4, complet... 40 8.8
42gb|AC133106.3| Homo sapiens BAC clone RP11-634B17 from 2, comple... 40 8.8
43gb|AC068195.6| Homo sapiens BAC clone RP11-114B24 from 2, comple... 40 8.8
44gb|AC097468.3| Homo sapiens BAC clone RP11-33O4 from 2, complete... 40 8.8
45gb|AC073911.38| Homo sapiens 12 BAC RP11-386I8 (Roswell Park Can... 40 8.8
46emb|AL603926.6| Human DNA sequence from clone RP11-356L9 on chro... 40 8.8
47gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 8.8
48emb|BX005474.6| Zebrafish DNA sequence from clone CH211-141E22 i... 40 8.8
49emb|AL121767.6|CNS01DSC Human chromosome 14 DNA sequence BAC C-2... 40 8.8
50gb|AC127244.3| Mus musculus BAC clone RP24-416M6 from 6, complet... 40 8.8
51ref|NM_152389.2| Homo sapiens hypothetical protein DKFZp434O0527... 40 8.8
52dbj|AB035929.1| Sarcophaga peregrina mRNA for sarcophaga-derived... 40 8.8 
>gb|AC137679.11| Mus musculus chromosome 12, clone RP23-302N13, complete sequence
          Length = 186273

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 202    tgaaagacagaaaaagggtgagtt 225
              ||||||||||||||||||||||||
Sbjct: 160820 tgaaagacagaaaaagggtgagtt 160843
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>emb|CT030189.8| Mouse DNA sequence from clone RP24-402B23 on chromosome 12, complete
              sequence
          Length = 223910

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 202    tgaaagacagaaaaagggtgagtt 225
              ||||||||||||||||||||||||
Sbjct: 199888 tgaaagacagaaaaagggtgagtt 199865
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>gb|AC123810.4| Mus musculus BAC clone RP24-178B17 from chromosome 8, complete sequence
          Length = 161521

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 217    gggtgagttttcttctttttgta 239
              |||||||||||||||||||||||
Sbjct: 144955 gggtgagttttcttctttttgta 144933
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>gb|AC149051.4| Mus musculus BAC clone RP24-325F10 from 8, complete sequence
          Length = 184939

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 217    gggtgagttttcttctttttgta 239
              |||||||||||||||||||||||
Sbjct: 108329 gggtgagttttcttctttttgta 108307
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>gb|AC133163.2| Mus musculus chromosome 9 clone RP24-338G17, complete sequence
          Length = 131860

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 217   gggtgagttttcttctttttgt 238
             ||||||||||||||||||||||
Sbjct: 83948 gggtgagttttcttctttttgt 83969
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>gb|AC118473.20| Mus musculus chromosome 9, clone RP23-271C5, complete sequence
          Length = 234183

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 217    gggtgagttttcttctttttgt 238
              ||||||||||||||||||||||
Sbjct: 136900 gggtgagttttcttctttttgt 136879
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>gb|AC166351.1| Mus musculus BAC clone RP24-224C7 from chromosome 17, complete sequence
          Length = 162550

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 217    gggtgagttttcttctttttgt 238
              ||||||||||||||||||||||
Sbjct: 125419 gggtgagttttcttctttttgt 125398
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>emb|AL645667.14| Mouse DNA sequence from clone RP23-316N16 on chromosome 13 contains the
             vomeronasal receptor 1 H1 pseudogene V1rh1, the V1rh3,
             V1ri4, V1ri7 and V1rh11 genes for vomeronasal receptors 1
             H3, I4, I7 and H11, three vomeronasal receptors 1 H
             pseudogenes, a vomeronasal receptor 1 I pseudogene,  an
             ABC transporter pseudogene, the gene for a novel
             vomeronasal receptor 1, I family member, a novel gene and
             two CpG islands, complete sequence
          Length = 179902

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 217   gggtgagttttcttctttttgt 238
             ||||||||||||||||||||||
Sbjct: 42646 gggtgagttttcttctttttgt 42625
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>gb|AC099052.2| Homo sapiens chromosome 3 clone RP11-437M11, complete sequence
          Length = 139280

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 112   gcagcttcagaatgttcataca 133
             ||||||||||||||||||||||
Sbjct: 97790 gcagcttcagaatgttcataca 97811
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>gb|AC154544.2| Mus musculus BAC clone RP23-228G19 from chromosome 17, complete
             sequence
          Length = 183626

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 217   gggtgagttttcttctttttgt 238
             ||||||||||||||||||||||
Sbjct: 43768 gggtgagttttcttctttttgt 43747
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>gb|AC092047.3| Homo sapiens chromosome 3 clone RP11-219I21, complete sequence
          Length = 194742

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 112   gcagcttcagaatgttcataca 133
             ||||||||||||||||||||||
Sbjct: 33031 gcagcttcagaatgttcataca 33010
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>gb|AF369907.1| Haemophilus influenzae biogroup aegyptius Iga1 protease type 2 (iga1)
            gene, complete cds
          Length = 5719

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 385  ttaaaaaatggacatattcat 405
            |||||||||||||||||||||
Sbjct: 2930 ttaaaaaatggacatattcat 2950
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>gb|AC137831.27| Medicago truncatula clone mth2-34o21, complete sequence
          Length = 117693

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 110    cagcagcttcagaatgttcat 130
              |||||||||||||||||||||
Sbjct: 107190 cagcagcttcagaatgttcat 107210
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>gb|AC020945.6| Homo sapiens chromosome 19 clone LLNLF-72H9, complete sequence
          Length = 39351

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 224  ttttcttctttttgtaggtac 244
            |||||||||||||||||||||
Sbjct: 3995 ttttcttctttttgtaggtac 3975
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>emb|BX004888.9| Zebrafish DNA sequence from clone DKEY-8F21 in linkage group 1,
             complete sequence
          Length = 219280

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 293   agactagaggcaaatttgcag 313
             |||||||||||||||||||||
Sbjct: 72612 agactagaggcaaatttgcag 72592
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>emb|BX294395.15| Zebrafish DNA sequence from clone CH211-220B11 in linkage group 5,
              complete sequence
          Length = 213232

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 424    tcgccttagtctttatattta 444
              |||||||||||||||||||||
Sbjct: 137249 tcgccttagtctttatattta 137229
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>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome
          Length = 1698955

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 249     caatccaaattggcaagcaca 269
               |||||||||||||||||||||
Sbjct: 1088787 caatccaaattggcaagcaca 1088807
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 218     ggtgagttttcttctttttgt 238
               |||||||||||||||||||||
Sbjct: 2812414 ggtgagttttcttctttttgt 2812394
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>gb|AC153795.1| Mus musculus  BAC RP23-276L17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 182285

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 195    gcttacttgaaagacagaaaaagg 218
              |||||||||| |||||||||||||
Sbjct: 152150 gcttacttgacagacagaaaaagg 152173
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>gb|AF073261.1| Sciaenops ocellatus microsatellite Soc 034 sequence
          Length = 176

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 194 cgcttacttgaaagacagaaaaag 217
           ||||||| ||||||||||||||||
Sbjct: 25  cgcttacctgaaagacagaaaaag 2
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>gb|BC031585.1| Homo sapiens hypothetical protein MGC35338, mRNA (cDNA clone
            MGC:35338 IMAGE:5180383), complete cds
          Length = 2292

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 397  catattcatctataggtcca 416
            ||||||||||||||||||||
Sbjct: 1771 catattcatctataggtcca 1752
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>emb|CR318659.26| Zebrafish DNA sequence from clone CH211-215M5 in linkage group 17,
              complete sequence
          Length = 167230

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    atgagattgtgttaaaaaat 393
              ||||||||||||||||||||
Sbjct: 135224 atgagattgtgttaaaaaat 135205
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>gb|AC109992.6| Homo sapiens 3 BAC RP11-383G6 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 112544

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  tggctatatttgtgaataaa 56
           ||||||||||||||||||||
Sbjct: 408 tggctatatttgtgaataaa 389
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>gb|AC125225.4| Mus musculus BAC clone RP23-36I17 from 6, complete sequence
          Length = 215406

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    taataacaagactagaggca 304
              ||||||||||||||||||||
Sbjct: 145052 taataacaagactagaggca 145033
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>gb|AC122012.3| Mus musculus BAC clone RP24-353N4 from 5, complete sequence
          Length = 188867

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   ctttttgtaggtacttttca 250
             ||||||||||||||||||||
Sbjct: 86425 ctttttgtaggtacttttca 86444
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>gb|AC124314.7| Mus musculus chromosome 10, clone RP23-193B6, complete sequence
          Length = 232720

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    gaataaagaaatactagata 69
             ||||||||||||||||||||
Sbjct: 88765 gaataaagaaatactagata 88746
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>emb|CR392328.18| Zebrafish DNA sequence from clone DKEYP-108C1 in linkage group 5,
             complete sequence
          Length = 182066

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   atgttcatacagttgatcct 142
             ||||||||||||||||||||
Sbjct: 15117 atgttcatacagttgatcct 15136
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>emb|CR387922.7| Zebrafish DNA sequence from clone CH211-254C11 in linkage group 17,
             complete sequence
          Length = 36100

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   atgagattgtgttaaaaaat 393
             ||||||||||||||||||||
Sbjct: 10650 atgagattgtgttaaaaaat 10669
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>emb|AL121949.13|HSDJ407E4 Human DNA sequence from clone RP3-407E4 on chromosome 6q12-13, complete
             sequence
          Length = 140287

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   agggtgagttttcttctttt 235
             ||||||||||||||||||||
Sbjct: 28416 agggtgagttttcttctttt 28397
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>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06,
             complete sequence
          Length = 143730

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 454   atgcagctgcagcacatgaa 473
             ||||||||||||||||||||
Sbjct: 39676 atgcagctgcagcacatgaa 39695
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>emb|CR855397.9| Zebrafish DNA sequence from clone CH73-77E20 in linkage group 18,
             complete sequence
          Length = 104077

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   gaaagacagaaaaagggtga 222
             ||||||||||||||||||||
Sbjct: 74031 gaaagacagaaaaagggtga 74050
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>gb|AC023508.16| Homo sapiens 3 BAC RP11-18O13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 136105

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     tggctatatttgtgaataaa 56
              ||||||||||||||||||||
Sbjct: 134508 tggctatatttgtgaataaa 134489
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>gb|AC097526.3| Homo sapiens BAC clone RP11-627H22 from 4, complete sequence
          Length = 144324

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tatttgtgaataaagaaata 62
             ||||||||||||||||||||
Sbjct: 93298 tatttgtgaataaagaaata 93279
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>gb|AC026786.5| Homo sapiens chromosome 12 clone CTD-2140B24, complete sequence
          Length = 160615

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 204    aaagacagaaaaagggtgagtttt 227
              ||||||||||||||||| ||||||
Sbjct: 118291 aaagacagaaaaagggtcagtttt 118268
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>emb|CR523956.1| Gallus gallus finished cDNA, clone ChEST690o5
          Length = 964

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 383 tgttaaaaaatggacatatt 402
           ||||||||||||||||||||
Sbjct: 814 tgttaaaaaatggacatatt 833
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>gb|AC104195.10| Mus musculus chromosome 5, clone RP24-95O4, complete sequence
          Length = 214251

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    gggtgagttttcttcttttt 236
              ||||||||||||||||||||
Sbjct: 118797 gggtgagttttcttcttttt 118816
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>emb|BX510649.12| Zebrafish DNA sequence from clone CH211-158M24 in linkage group 5,
             complete sequence
          Length = 189844

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   atgttcatacagttgatcct 142
             ||||||||||||||||||||
Sbjct: 11309 atgttcatacagttgatcct 11328
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>emb|BX548256.7| Zebrafish DNA sequence from clone DKEYP-75B4 in linkage group 1, complete
              sequence
          Length = 181272

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 429    ttagtctttatatttagtatttac 452
              ||||| ||||||||||||||||||
Sbjct: 140787 ttagtatttatatttagtatttac 140810
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>gb|DQ295238.1| Uncultured marine bacterium Ant4E12, partial genomic sequence
          Length = 43087

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   cagctgcagcacatgaacgc 476
             ||||||||||||||||||||
Sbjct: 25868 cagctgcagcacatgaacgc 25849
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    atgcagctgcagcacatgaa 473
              ||||||||||||||||||||
Sbjct: 508708 atgcagctgcagcacatgaa 508727
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>gb|AC107208.6| Homo sapiens BAC clone RP13-487K5 from 4, complete sequence
          Length = 81763

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tatttgtgaataaagaaata 62
             ||||||||||||||||||||
Sbjct: 26796 tatttgtgaataaagaaata 26777
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>gb|AC133106.3| Homo sapiens BAC clone RP11-634B17 from 2, complete sequence
          Length = 109568

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    ataaagaaatactagatata 71
             ||||||||||||||||||||
Sbjct: 92167 ataaagaaatactagatata 92148
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>gb|AC068195.6| Homo sapiens BAC clone RP11-114B24 from 2, complete sequence
          Length = 178147

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 611   caggaatgggccaggcccta 630
             ||||||||||||||||||||
Sbjct: 48606 caggaatgggccaggcccta 48625
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>gb|AC097468.3| Homo sapiens BAC clone RP11-33O4 from 2, complete sequence
          Length = 169741

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 397    catattcatctataggtcca 416
              ||||||||||||||||||||
Sbjct: 113820 catattcatctataggtcca 113839
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>gb|AC073911.38| Homo sapiens 12 BAC RP11-386I8 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 144266

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 204  aaagacagaaaaagggtgagtttt 227
            ||||||||||||||||| ||||||
Sbjct: 7495 aaagacagaaaaagggtcagtttt 7472
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>emb|AL603926.6| Human DNA sequence from clone RP11-356L9 on chromosome 22, complete
             sequence
          Length = 180455

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 204   aaagacagaaaaagggtgagtttt 227
             ||||||||||||||||| ||||||
Sbjct: 21494 aaagacagaaaaagggtcagtttt 21471
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 433     tctttatatttagtatttac 452
               ||||||||||||||||||||
Sbjct: 1724654 tctttatatttagtatttac 1724635
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>emb|BX005474.6| Zebrafish DNA sequence from clone CH211-141E22 in linkage group 18,
             complete sequence
          Length = 106095

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   gaaagacagaaaaagggtga 222
             ||||||||||||||||||||
Sbjct: 76004 gaaagacagaaaaagggtga 76023
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>emb|AL121767.6|CNS01DSC Human chromosome 14 DNA sequence BAC C-2593I21 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 208309

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 53     taaagaaatactagatatatgtac 76
              ||||||||||| ||||||||||||
Sbjct: 120820 taaagaaatacaagatatatgtac 120843
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>gb|AC127244.3| Mus musculus BAC clone RP24-416M6 from 6, complete sequence
          Length = 165720

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 195   gcttacttgaaagacagaaaaagg 218
             |||||||||| |||||||||||||
Sbjct: 36385 gcttacttgacagacagaaaaagg 36408
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>ref|NM_152389.2| Homo sapiens hypothetical protein DKFZp434O0527 (DKFZp434O0527),
            transcript variant 2, mRNA
          Length = 2290

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 397  catattcatctataggtcca 416
            ||||||||||||||||||||
Sbjct: 1769 catattcatctataggtcca 1750
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>dbj|AB035929.1| Sarcophaga peregrina mRNA for sarcophaga-derived Rel/Ankyrin
            molecule, complete cds
          Length = 2214

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  ttttgtaggtacttttcaat 252
            ||||||||||||||||||||
Sbjct: 1480 ttttgtaggtacttttcaat 1461


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,890,099
Number of Sequences: 3902068
Number of extensions: 6890099
Number of successful extensions: 135748
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135493
Number of HSP's gapped (non-prelim): 255
length of query: 643
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 620
effective length of database: 17,143,297,704
effective search space: 10628844576480
effective search space used: 10628844576480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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