| Clone Name | rbags20i04 |
|---|---|
| Clone Library Name | barley_pub |
>RR1_SPIOL (P29344) 30S ribosomal protein S1, chloroplast precursor (CS1)| Length = 411 Score = 62.0 bits (149), Expect(2) = 3e-10 Identities = 31/33 (93%), Positives = 32/33 (96%) Frame = -3 Query: 599 KLVFEKADEMAQIFRQRIAQAEAMARADMLRFQ 501 KLVFEKA+EMAQ FRQRIAQAEAMARADMLRFQ Sbjct: 343 KLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQ 375 Score = 22.3 bits (46), Expect(2) = 3e-10 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -2 Query: 621 GDMIRNPKAGF 589 GDMIRNPK F Sbjct: 336 GDMIRNPKLVF 346
>GLGC_LACLA (Q9CHN1) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)| (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) Length = 380 Score = 32.0 bits (71), Expect = 1.6 Identities = 27/107 (25%), Positives = 47/107 (43%) Frame = +3 Query: 66 QQQRSFMDTHIGRGRQCAVNGVVANVRLSQPF*GD*LYMHTLFCTKWIDGFTKGIQLEYL 245 Q Q ++ HIG G +NG+ + V + QP+ + +KW +G + + Sbjct: 59 QYQPLTLNAHIGNGAPWGLNGINSGVTILQPY-------SSQEGSKWFEGTSHAV----- 106 Query: 246 FGRFSAPYASYTMIQAQVDDGELSEYDMVMSSSCIHKQMNYRESLES 386 Y + + I D + EY +++S I+K M+Y LES Sbjct: 107 -------YQNISYI-----DQQNPEYVLILSGDHIYK-MDYEAMLES 140
>GPR37_RAT (Q9QYC6) Probable G-protein coupled receptor 37 precursor| (G-protein coupled receptor CNS1) Length = 603 Score = 30.8 bits (68), Expect = 3.5 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -1 Query: 130 TPLTAHCLPLPICVSIKERCCCCC 59 TP+ CL P + E CCCCC Sbjct: 535 TPVLLFCLCRPFSRAFMECCCCCC 558
>GPR37_MOUSE (Q9QY42) Probable G-protein coupled receptor 37 precursor| Length = 600 Score = 30.8 bits (68), Expect = 3.5 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -1 Query: 130 TPLTAHCLPLPICVSIKERCCCCC 59 TP+ CL P + E CCCCC Sbjct: 532 TPVLLFCLCRPFSRAFMECCCCCC 555
>GPR37_HUMAN (O15354) Probable G-protein coupled receptor 37 precursor| (Endothelin B receptor-like protein 1) (ETBR-LP-1) (Parkin-associated endothelin receptor-like receptor) (PAELR) Length = 613 Score = 30.8 bits (68), Expect = 3.5 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -1 Query: 130 TPLTAHCLPLPICVSIKERCCCCC 59 TP+ CL P + E CCCCC Sbjct: 545 TPVLLFCLCKPFSRAFMECCCCCC 568
>CHS1_RHIRA (Q12632) Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 1) (Class-II chitin synthase 1) Length = 852 Score = 30.4 bits (67), Expect = 4.6 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 8/67 (11%) Frame = +3 Query: 183 HTLFCTKWIDGFTKGIQLEYLFGRFSAPYASYTMIQAQVDDGEL--------SEYDMVMS 338 + LFC+ W+ KGIQL ++ Y + T Q + D L S Y + + Sbjct: 616 YMLFCSSWL--IYKGIQLAA--EKYDWTYDTTTNFQIAMSDPGLRNMVISLSSTYGIYLV 671 Query: 339 SSCIHKQ 359 SSC+H+Q Sbjct: 672 SSCLHRQ 678
>RS1A_SYNY3 (P73530) 30S ribosomal protein S1 homolog A| Length = 328 Score = 30.4 bits (67), Expect = 4.6 Identities = 16/26 (61%), Positives = 21/26 (80%), Gaps = 1/26 (3%) Frame = -3 Query: 602 RKLVFEKADEMAQIFRQ-RIAQAEAM 528 R LV E ADEMA+IFRQ R+A+A+ + Sbjct: 277 RDLVNEMADEMAEIFRQKRLAEAQGI 302
>RPOC1_LACSA (Q56P12) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) Length = 689 Score = 29.6 bits (65), Expect = 7.9 Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 8/88 (9%) Frame = +2 Query: 380 GIRCILPIAPIRPWIALHPLVCL--------MTMALRCPLS*ETIHSLAGILTCRHEPLP 535 GI+ LP+ I LHPLVC MA+ PLS E + A +L H Sbjct: 462 GIQAFLPVLVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEA-QAEARLLMFSH---- 516 Query: 536 LLELFSA*ISAPSHQPSQKPAFGLRIMS 619 + L S I P P+Q GL +++ Sbjct: 517 -MNLLSPTIGDPISAPTQDMLSGLYVLT 543
>TXK_HUMAN (P42681) Tyrosine-protein kinase TXK (EC 2.7.10.2)| Length = 527 Score = 29.6 bits (65), Expect = 7.9 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -1 Query: 73 CCCCCLAKRQERREGSIST 17 CCCC + KRQ R + S+ST Sbjct: 16 CCCCSVQKRQMRTQISLST 34 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,054,763 Number of Sequences: 219361 Number of extensions: 1990861 Number of successful extensions: 5114 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4735 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5087 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)