ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20h20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480371.1| Oryza sativa (japonica cultivar-group), mRNA 297 3e-77
2ref|XM_507148.1| PREDICTED Oryza sativa (japonica cultivar-group... 297 3e-77
3dbj|AK103587.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 3e-77
4dbj|AK063927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 3e-77
5gb|BT017322.1| Zea mays clone EL01N0319E06.c mRNA sequence 264 4e-67
6gb|AF028248.1|AF028248 Hordeum chilense RAPD marker IAS-pHc1-1 200 4e-48
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 103 8e-19
8dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic D... 103 8e-19
9ref|NM_202617.1| Arabidopsis thaliana S-adenosylmethionine-depen... 60 1e-05
10ref|NM_112956.3| Arabidopsis thaliana S-adenosylmethionine-depen... 60 1e-05
11gb|BT006067.1| Arabidopsis thaliana clone U20104 unknown protein... 60 1e-05
12emb|BX822732.1|CNS0A74C Arabidopsis thaliana Full-length cDNA Co... 60 1e-05
13emb|BX823608.1|CNS0A6NR Arabidopsis thaliana Full-length cDNA Co... 60 1e-05
14gb|BT005804.1| Arabidopsis thaliana clone RAFL14-85-K11 (R20104)... 60 1e-05
15dbj|AP002034.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 52 0.003
16emb|BX825779.1|CNS0A6CL Arabidopsis thaliana Full-length cDNA Co... 48 0.039
17emb|AL513307.10| Human DNA sequence from clone RP11-239E12 on ch... 42 2.4
18emb|AL358234.14| Human DNA sequence from clone RP11-164A7 on chr... 42 2.4
19gb|AC162385.4| Mus musculus 10 BAC RP24-397D18 (Roswell Park Can... 42 2.4
20gb|AC022021.10| Homo sapiens chromosome 10 clone RP11-351M16, co... 42 2.4
21gb|AF447035.1| Morina longifolia NADH dehydrogenase subunit F (n... 42 2.4
22gb|AF130201.1|AF130201 Pittosporum tobira NADH dehydrogenase sub... 42 2.4
23dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
24dbj|AP005818.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
25dbj|AP005562.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
26emb|AL928685.7| Zebrafish DNA sequence from clone CH211-139G14, ... 42 2.4
27emb|AL669834.10| Mouse DNA sequence from clone RP23-114O4 on chr... 42 2.4
28gb|AY675321.1| Homo sapiens CDC14 cell division cycle 14 homolog... 40 9.6
29ref|XM_593831.2| PREDICTED: Bos taurus similar to solute carrier... 40 9.6
30gb|AC131756.3| Mus musculus BAC clone RP24-199J23 from chromosom... 40 9.6
31emb|AJ271361.2|FRU271361 Takifugu rubripes wnt2 (partial), frank... 40 9.6
32gb|AE014182.1| Mus musculus piebald deletion region section 10 o... 40 9.6
33gb|AC010512.7| Homo sapiens chromosome 19 clone LLNLR-226F1, com... 40 9.6
34gb|AC093013.14| Homo sapiens 12 BAC RP11-158O15 (Roswell Park Ca... 40 9.6
35gb|AC087333.2|AC087333 Takifugu rubripes clone 244C11, complete ... 40 9.6
36gb|AC158597.7| Mus musculus 10 BAC RP24-216E13 (Roswell Park Can... 40 9.6
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
38gb|AC104596.4| Homo sapiens BAC clone RP11-54P19 from 4, complet... 40 9.6
39gb|AC104689.4| Homo sapiens BAC clone RP11-158O16 from 4, comple... 40 9.6
40gb|AC155714.6| Mus musculus 10 BAC RP24-165I13 (Roswell Park Can... 40 9.6
41gb|AY640386.1| Calopsis viminea tRNA-Lys (trnK) gene, partial se... 40 9.6
42gb|AF319457.1|AF319457 Petroselinum crispum myosin subfamily VII... 40 9.6
43gb|AC142260.6| Mus musculus BAC clone RP24-508M8 from chromosome... 40 9.6
44gb|AC084357.23| Homo sapiens 12q BAC RP11-415I12 (Roswell Park C... 40 9.6
45dbj|AP000735.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 9.6
46dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
47gb|AC007514.5|AC007514 Homo sapiens chromosome 14 clone BACs 209... 40 9.6
48emb|AM233362.1| Francisella tularensis subsp. holarctica strain ... 40 9.6
49emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4... 40 9.6
50emb|AL133477.16| Human DNA sequence from clone RP11-172F4 on chr... 40 9.6 
>ref|XM_480371.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1416

 Score =  297 bits (150), Expect = 3e-77
 Identities = 295/338 (87%), Gaps = 4/338 (1%)
 Strand = Plus / Minus

                                                                        
Query: 364  tcttccctctgttagcattgttggctctccgctgggagggtggagggcctcgcttccgca 423
            |||| |||||||| ||||||||||| |||||||||||||| ||  |||||| ||| ||||
Sbjct: 1164 tctttcctctgtttgcattgttggccctccgctgggaggggggttggcctctcttgcgca 1105

                                                                        
Query: 424  aaacaaatgcgaggtagagataggatacctcccactcatcttgtgatagtgagctttgga 483
            |||||||||||||||||||||||| ||||||||| ||||| ||||| ||||  |||||| 
Sbjct: 1104 aaacaaatgcgaggtagagataggctacctcccattcatcctgtgacagtgtactttggt 1045

                                                                        
Query: 484  ccgatcgtccatcaccaagagcacccagccttcgcatgagatcagcaaactctggctttt 543
            ||   | ||||||||| || ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 1044 cctgccttccatcacctagggcacccagcctccgcatgagctcagcaaactctggctttt 985

                                                                        
Query: 544  gcaagtacctcatgtacaaattcatgggaagttcttcattagaaccagctctaaatcata 603
            ||||||| ||| ||||||||||||| ||||||| ||| | ||||||| ||| |  |||||
Sbjct: 984  gcaagta-ctcgtgtacaaattcat-ggaagtttttcgtcagaaccaactccaggtcata 927

                                                                        
Query: 604  ctcctcttgccagtagtttgaagagatggaatggaacaacccactccgggcaatcaaact 663
            |||||| |||||| | ||||||||||||||||||||||||||| ||||||||||| ||| 
Sbjct: 926  ctcctc-tgccagcaatttgaagagatggaatggaacaacccattccgggcaatc-aaca 869

                                                  
Query: 664  gcgtcctctaaatgaaacttgtacttgataccaaaagg 701
            || |||||||| ||||||||||| |||||||| |||||
Sbjct: 868  gcatcctctaagtgaaacttgtatttgataccgaaagg 831
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>ref|XM_507148.1| PREDICTED Oryza sativa (japonica cultivar-group), P0455A11.11 mRNA
          Length = 1454

 Score =  297 bits (150), Expect = 3e-77
 Identities = 295/338 (87%), Gaps = 4/338 (1%)
 Strand = Plus / Minus

                                                                        
Query: 364  tcttccctctgttagcattgttggctctccgctgggagggtggagggcctcgcttccgca 423
            |||| |||||||| ||||||||||| |||||||||||||| ||  |||||| ||| ||||
Sbjct: 1202 tctttcctctgtttgcattgttggccctccgctgggaggggggttggcctctcttgcgca 1143

                                                                        
Query: 424  aaacaaatgcgaggtagagataggatacctcccactcatcttgtgatagtgagctttgga 483
            |||||||||||||||||||||||| ||||||||| ||||| ||||| ||||  |||||| 
Sbjct: 1142 aaacaaatgcgaggtagagataggctacctcccattcatcctgtgacagtgtactttggt 1083

                                                                        
Query: 484  ccgatcgtccatcaccaagagcacccagccttcgcatgagatcagcaaactctggctttt 543
            ||   | ||||||||| || ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 1082 cctgccttccatcacctagggcacccagcctccgcatgagctcagcaaactctggctttt 1023

                                                                        
Query: 544  gcaagtacctcatgtacaaattcatgggaagttcttcattagaaccagctctaaatcata 603
            ||||||| ||| ||||||||||||| ||||||| ||| | ||||||| ||| |  |||||
Sbjct: 1022 gcaagta-ctcgtgtacaaattcat-ggaagtttttcgtcagaaccaactccaggtcata 965

                                                                        
Query: 604  ctcctcttgccagtagtttgaagagatggaatggaacaacccactccgggcaatcaaact 663
            |||||| |||||| | ||||||||||||||||||||||||||| ||||||||||| ||| 
Sbjct: 964  ctcctc-tgccagcaatttgaagagatggaatggaacaacccattccgggcaatc-aaca 907

                                                  
Query: 664  gcgtcctctaaatgaaacttgtacttgataccaaaagg 701
            || |||||||| ||||||||||| |||||||| |||||
Sbjct: 906  gcatcctctaagtgaaacttgtatttgataccgaaagg 869
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>dbj|AK103587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133C03, full
            insert sequence
          Length = 1454

 Score =  297 bits (150), Expect = 3e-77
 Identities = 295/338 (87%), Gaps = 4/338 (1%)
 Strand = Plus / Minus

                                                                        
Query: 364  tcttccctctgttagcattgttggctctccgctgggagggtggagggcctcgcttccgca 423
            |||| |||||||| ||||||||||| |||||||||||||| ||  |||||| ||| ||||
Sbjct: 1202 tctttcctctgtttgcattgttggccctccgctgggaggggggttggcctctcttgcgca 1143

                                                                        
Query: 424  aaacaaatgcgaggtagagataggatacctcccactcatcttgtgatagtgagctttgga 483
            |||||||||||||||||||||||| ||||||||| ||||| ||||| ||||  |||||| 
Sbjct: 1142 aaacaaatgcgaggtagagataggctacctcccattcatcctgtgacagtgtactttggt 1083

                                                                        
Query: 484  ccgatcgtccatcaccaagagcacccagccttcgcatgagatcagcaaactctggctttt 543
            ||   | ||||||||| || ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 1082 cctgccttccatcacctagggcacccagcctccgcatgagctcagcaaactctggctttt 1023

                                                                        
Query: 544  gcaagtacctcatgtacaaattcatgggaagttcttcattagaaccagctctaaatcata 603
            ||||||| ||| ||||||||||||| ||||||| ||| | ||||||| ||| |  |||||
Sbjct: 1022 gcaagta-ctcgtgtacaaattcat-ggaagtttttcgtcagaaccaactccaggtcata 965

                                                                        
Query: 604  ctcctcttgccagtagtttgaagagatggaatggaacaacccactccgggcaatcaaact 663
            |||||| |||||| | ||||||||||||||||||||||||||| ||||||||||| ||| 
Sbjct: 964  ctcctc-tgccagcaatttgaagagatggaatggaacaacccattccgggcaatc-aaca 907

                                                  
Query: 664  gcgtcctctaaatgaaacttgtacttgataccaaaagg 701
            || |||||||| ||||||||||| |||||||| |||||
Sbjct: 906  gcatcctctaagtgaaacttgtatttgataccgaaagg 869
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>dbj|AK063927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-C08, full
            insert sequence
          Length = 1416

 Score =  297 bits (150), Expect = 3e-77
 Identities = 295/338 (87%), Gaps = 4/338 (1%)
 Strand = Plus / Minus

                                                                        
Query: 364  tcttccctctgttagcattgttggctctccgctgggagggtggagggcctcgcttccgca 423
            |||| |||||||| ||||||||||| |||||||||||||| ||  |||||| ||| ||||
Sbjct: 1164 tctttcctctgtttgcattgttggccctccgctgggaggggggttggcctctcttgcgca 1105

                                                                        
Query: 424  aaacaaatgcgaggtagagataggatacctcccactcatcttgtgatagtgagctttgga 483
            |||||||||||||||||||||||| ||||||||| ||||| ||||| ||||  |||||| 
Sbjct: 1104 aaacaaatgcgaggtagagataggctacctcccattcatcctgtgacagtgtactttggt 1045

                                                                        
Query: 484  ccgatcgtccatcaccaagagcacccagccttcgcatgagatcagcaaactctggctttt 543
            ||   | ||||||||| || ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 1044 cctgccttccatcacctagggcacccagcctccgcatgagctcagcaaactctggctttt 985

                                                                        
Query: 544  gcaagtacctcatgtacaaattcatgggaagttcttcattagaaccagctctaaatcata 603
            ||||||| ||| ||||||||||||| ||||||| ||| | ||||||| ||| |  |||||
Sbjct: 984  gcaagta-ctcgtgtacaaattcat-ggaagtttttcgtcagaaccaactccaggtcata 927

                                                                        
Query: 604  ctcctcttgccagtagtttgaagagatggaatggaacaacccactccgggcaatcaaact 663
            |||||| |||||| | ||||||||||||||||||||||||||| ||||||||||| ||| 
Sbjct: 926  ctcctc-tgccagcaatttgaagagatggaatggaacaacccattccgggcaatc-aaca 869

                                                  
Query: 664  gcgtcctctaaatgaaacttgtacttgataccaaaagg 701
            || |||||||| ||||||||||| |||||||| |||||
Sbjct: 868  gcatcctctaagtgaaacttgtatttgataccgaaagg 831
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>gb|BT017322.1| Zea mays clone EL01N0319E06.c mRNA sequence
          Length = 1014

 Score =  264 bits (133), Expect = 4e-67
 Identities = 287/333 (86%), Gaps = 4/333 (1%)
 Strand = Plus / Minus

                                                                       
Query: 366 ttccctctgttagcattgttggctctccgctgggagggtggagggcctcgcttccgcaaa 425
           ||||||||||| || ||| ||||||| || ||||  || ||  |||||||||||||||  
Sbjct: 454 ttccctctgtttgcgttgctggctcttcgttgggtaggcggttggcctcgcttccgcagg 395

                                                                       
Query: 426 acaaatgcgaggtagagataggatacctcccactcatcttgtgatagtgagctttggacc 485
           ||||| ||||| ||||||||||| |||||||||||||||||||| ||||  |||||| ||
Sbjct: 394 acaaacgcgagatagagataggaaacctcccactcatcttgtgacagtgtactttggtcc 335

                                                                       
Query: 486 gatcgtccatcaccaagagcacccagccttcgcatgagatcagcaaactctggcttttgc 545
              | ||||||||| || ||||||||||| ||||| || || || |||||||| ||||||
Sbjct: 334 tgccttccatcaccgagggcacccagcctccgcatcagctcggcgaactctggtttttgc 275

                                                                       
Query: 546 aagtacctcatgtacaaattcatgggaagttcttcattagaaccagctctaaatcatact 605
           ||||| ||| ||||||||||||| ||||||||||||| ||||||||||| | ||||||||
Sbjct: 274 aagta-ctcgtgtacaaattcat-ggaagttcttcatcagaaccagctcgagatcatact 217

                                                                       
Query: 606 cctcttgccagtagtttgaagagatggaatggaacaacccactccgggcaatcaaactgc 665
           |||| ||||| || ||||||||||||||||||||||||||| || |||||||| ||| ||
Sbjct: 216 cctc-tgccaataatttgaagagatggaatggaacaacccattctgggcaatc-aacagc 159

                                            
Query: 666 gtcctctaaatgaaacttgtacttgataccaaa 698
            |||||||| |||||||||||||||||||||||
Sbjct: 158 atcctctaagtgaaacttgtacttgataccaaa 126
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>gb|AF028248.1|AF028248 Hordeum chilense RAPD marker IAS-pHc1-1
          Length = 502

 Score =  200 bits (101), Expect = 4e-48
 Identities = 124/129 (96%), Gaps = 2/129 (1%)
 Strand = Plus / Plus

                                                                       
Query: 477 ctttggaccgatcgtccatcaccaagagcacccagccttcgcatgagatcagcaaactct 536
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 200 ctttggaccgatcgtccatcaccaagagcacccagccttcgcatgagatcggcaaactct 259

                                                                       
Query: 537 ggcttttgcaagtacctcatgtacaaattcatgggaagttcttcattagaaccagctcta 596
           |||||||||||||| ||||||||||||||| | ||||||||||||| |||||||||||||
Sbjct: 260 ggcttttgcaagta-ctcatgtacaaattcgt-ggaagttcttcatcagaaccagctcta 317

                    
Query: 597 aatcatact 605
           |||||||||
Sbjct: 318 aatcatact 326



 Score =  101 bits (51), Expect = 3e-18
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                      
Query: 416 cttccgcaaaacaaatgcgaggtagagataggatacctcccactcatcttgtgatagtg 474
           ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 63  cttccgcaaaacaaatgcgaggtagggataggacacctcccactcatcttgtgatagtg 121



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                         
Query: 611 tgccagtagtttgaagagatggaatggaacaacccactccgggcaa 656
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tgccagtagtttgaagagatggaatggaacaacccactccgggcaa 501
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  103 bits (52), Expect = 8e-19
 Identities = 74/80 (92%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                           
Query: 491     tccatcaccaagagcacccagccttcgcatgagatcagcaaactctggcttttgcaagta 550
               ||||||||| || ||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 4670489 tccatcacctagggcacccagcctccgcatgagctcagcaaactctggcttttgcaagta 4670548

                                   
Query: 551     cctcatgtacaaattcatgg 570
                ||| |||||||||||||||
Sbjct: 4670549 -ctcgtgtacaaattcatgg 4670567



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                      
Query: 420     cgcaaaacaaatgcgaggtagagataggatacctcccactcatcttgtgatagtg 474
               |||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||
Sbjct: 4670336 cgcaaaacaaatgcgaggtagagataggctacctcccattcatcctgtgacagtg 4670390



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                                 
Query: 611     tgccagtagtttgaagagatggaatggaacaacccactccgggcaatcaa 660
               |||||| | ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4670803 tgccagcaatttgaagagatggaatggaacaacccattccgggcaatcaa 4670852



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                       
Query: 364     tcttccctctgttagcattgttggctctccgctgggaggg 403
               |||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 4670200 tctttcctctgtttgcattgttggccctccgctgggaggg 4670239



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 668     cctctaaatgaaacttgtacttgataccaaaagg 701
               ||||||| ||||||||||| |||||||| |||||
Sbjct: 4671482 cctctaagtgaaacttgtatttgataccgaaagg 4671515
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>dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0455A11
          Length = 158629

 Score =  103 bits (52), Expect = 8e-19
 Identities = 74/80 (92%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                         
Query: 491   tccatcaccaagagcacccagccttcgcatgagatcagcaaactctggcttttgcaagta 550
             ||||||||| || ||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 28505 tccatcacctagggcacccagcctccgcatgagctcagcaaactctggcttttgcaagta 28564

                                 
Query: 551   cctcatgtacaaattcatgg 570
              ||| |||||||||||||||
Sbjct: 28565 -ctcgtgtacaaattcatgg 28583



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                    
Query: 420   cgcaaaacaaatgcgaggtagagataggatacctcccactcatcttgtgatagtg 474
             |||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||
Sbjct: 28352 cgcaaaacaaatgcgaggtagagataggctacctcccattcatcctgtgacagtg 28406



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                               
Query: 611   tgccagtagtttgaagagatggaatggaacaacccactccgggcaatcaa 660
             |||||| | ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 28819 tgccagcaatttgaagagatggaatggaacaacccattccgggcaatcaa 28868



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 364   tcttccctctgttagcattgttggctctccgctgggaggg 403
             |||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 28216 tctttcctctgtttgcattgttggccctccgctgggaggg 28255



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 668   cctctaaatgaaacttgtacttgataccaaaagg 701
             ||||||| ||||||||||| |||||||| |||||
Sbjct: 29498 cctctaagtgaaacttgtatttgataccgaaagg 29531
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>ref|NM_202617.1| Arabidopsis thaliana S-adenosylmethionine-dependent
            methyltransferase/ catalytic AT3G20650 transcript variant
            AT3G20650.2 mRNA, complete cds
          Length = 1486

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 98/118 (83%), Gaps = 2/118 (1%)
 Strand = Plus / Minus

                                                                        
Query: 492  ccatcaccaagagcacccagccttcgcatgagatcagcaaactctggcttttgcaagtac 551
            |||||||| | |||||| ||||||| |||||| ||  ||||||||||||||| ||  || 
Sbjct: 1030 ccatcacccaaagcaccaagccttctcatgagttcgacaaactctggctttttcatata- 972

                                                                      
Query: 552  ctcatgtacaaattcatgggaagttcttcattagaaccagctctaaatcatactcctc 609
            |||||| ||||| || |||| |||||||||  |  |||| ||||||||||||||||||
Sbjct: 971  ctcatggacaaactcgtggg-agttcttcacaaataccaactctaaatcatactcctc 915
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>ref|NM_112956.3| Arabidopsis thaliana S-adenosylmethionine-dependent
            methyltransferase/ catalytic AT3G20650 transcript variant
            AT3G20650.1 mRNA, complete cds
          Length = 1543

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 98/118 (83%), Gaps = 2/118 (1%)
 Strand = Plus / Minus

                                                                        
Query: 492  ccatcaccaagagcacccagccttcgcatgagatcagcaaactctggcttttgcaagtac 551
            |||||||| | |||||| ||||||| |||||| ||  ||||||||||||||| ||  || 
Sbjct: 1033 ccatcacccaaagcaccaagccttctcatgagttcgacaaactctggctttttcatata- 975

                                                                      
Query: 552  ctcatgtacaaattcatgggaagttcttcattagaaccagctctaaatcatactcctc 609
            |||||| ||||| || |||| |||||||||  |  |||| ||||||||||||||||||
Sbjct: 974  ctcatggacaaactcgtggg-agttcttcacaaataccaactctaaatcatactcctc 918
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>gb|BT006067.1| Arabidopsis thaliana clone U20104 unknown protein (At3g20650) mRNA,
           complete cds
          Length = 1144

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 98/118 (83%), Gaps = 2/118 (1%)
 Strand = Plus / Minus

                                                                       
Query: 492 ccatcaccaagagcacccagccttcgcatgagatcagcaaactctggcttttgcaagtac 551
           |||||||| | |||||| ||||||| |||||| ||  ||||||||||||||| ||  || 
Sbjct: 944 ccatcacccaaagcaccaagccttctcatgagttcgacaaactctggctttttcatata- 886

                                                                     
Query: 552 ctcatgtacaaattcatgggaagttcttcattagaaccagctctaaatcatactcctc 609
           |||||| ||||| || |||| |||||||||  |  |||| ||||||||||||||||||
Sbjct: 885 ctcatggacaaactcgtggg-agttcttcacaaataccaactctaaatcatactcctc 829
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>emb|BX822732.1|CNS0A74C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB60ZA08 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1256

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 98/118 (83%), Gaps = 2/118 (1%)
 Strand = Plus / Minus

                                                                        
Query: 492  ccatcaccaagagcacccagccttcgcatgagatcagcaaactctggcttttgcaagtac 551
            |||||||| | |||||| ||||||| |||||| ||  ||||||||||||||| ||  || 
Sbjct: 1022 ccatcacccaaagcaccaagccttctcatgagttcgacaaactctggctttttcatata- 964

                                                                      
Query: 552  ctcatgtacaaattcatgggaagttcttcattagaaccagctctaaatcatactcctc 609
            |||||| ||||| || |||| |||||||||  |  |||| ||||||||||||||||||
Sbjct: 963  ctcatggacaaactcgtggg-agttcttcacaaataccaactctaaatcatactcctc 907
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>emb|BX823608.1|CNS0A6NR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS56ZC04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1416

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 98/118 (83%), Gaps = 2/118 (1%)
 Strand = Plus / Minus

                                                                       
Query: 492 ccatcaccaagagcacccagccttcgcatgagatcagcaaactctggcttttgcaagtac 551
           |||||||| | |||||| ||||||| |||||| ||  ||||||||||||||| ||  || 
Sbjct: 960 ccatcacccaaagcaccaagccttctcatgagttcgacaaactctggctttttcatata- 902

                                                                     
Query: 552 ctcatgtacaaattcatgggaagttcttcattagaaccagctctaaatcatactcctc 609
           |||||| ||||| || |||| |||||||||  |  |||| ||||||||||||||||||
Sbjct: 901 ctcatggacaaactcgtggg-agttcttcacaaataccaactctaaatcatactcctc 845
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>gb|BT005804.1| Arabidopsis thaliana clone RAFL14-85-K11 (R20104) unknown protein
            (At3g20650) mRNA, complete cds
          Length = 1326

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 98/118 (83%), Gaps = 2/118 (1%)
 Strand = Plus / Minus

                                                                        
Query: 492  ccatcaccaagagcacccagccttcgcatgagatcagcaaactctggcttttgcaagtac 551
            |||||||| | |||||| ||||||| |||||| ||  ||||||||||||||| ||  || 
Sbjct: 1039 ccatcacccaaagcaccaagccttctcatgagttcgacaaactctggctttttcatata- 981

                                                                      
Query: 552  ctcatgtacaaattcatgggaagttcttcattagaaccagctctaaatcatactcctc 609
            |||||| ||||| || |||| |||||||||  |  |||| ||||||||||||||||||
Sbjct: 980  ctcatggacaaactcgtggg-agttcttcacaaataccaactctaaatcatactcctc 924
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>dbj|AP002034.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: F3H11
          Length = 33442

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 94/114 (82%), Gaps = 2/114 (1%)
 Strand = Plus / Plus

                                                                         
Query: 492   ccatcaccaagagcacccagccttcgcatgagatcagcaaactctggcttttgcaagtac 551
             |||||||| | |||||| ||||||| |||||| ||  ||||||||||||||| ||  || 
Sbjct: 15514 ccatcacccaaagcaccaagccttctcatgagttcgacaaactctggctttttcatata- 15572

                                                                   
Query: 552   ctcatgtacaaattcatgggaagttcttcattagaaccagctctaaatcatact 605
             |||||| ||||| || |||| |||||||||  |  |||| ||||||||||||||
Sbjct: 15573 ctcatggacaaactcgtggg-agttcttcacaaataccaactctaaatcatact 15625
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>emb|BX825779.1|CNS0A6CL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL62ZB02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1141

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 492 ccatcaccaagagcacccagccttcgcatgagatcagcaaactctggctttt 543
           |||||||| | |||||| ||||||| |||||| ||  |||||||||||||||
Sbjct: 631 ccatcacccaaagcaccaagccttctcatgagttcgacaaactctggctttt 580
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>emb|AL513307.10| Human DNA sequence from clone RP11-239E12 on chromosome 1, complete
             sequence
          Length = 168544

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 563   attcatgggaagttcttcatt 583
             |||||||||||||||||||||
Sbjct: 41653 attcatgggaagttcttcatt 41673
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>emb|AL358234.14| Human DNA sequence from clone RP11-164A7 on chromosome 10 Contains the
             5' end of the WAC gene for WW domain-containing adapter
             with a coiled-coil region (PRO1741, FLJ31290, KIAA1844,
             MGC10753), the 5' end of a novel gene and a CpG island,
             complete sequence
          Length = 103930

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 614   cagtagtttgaagagatggaa 634
             |||||||||||||||||||||
Sbjct: 34893 cagtagtttgaagagatggaa 34873
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>gb|AC162385.4| Mus musculus 10 BAC RP24-397D18 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 202541

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   cattacacttggtaagttaca 201
             |||||||||||||||||||||
Sbjct: 65546 cattacacttggtaagttaca 65566
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>gb|AC022021.10| Homo sapiens chromosome 10 clone RP11-351M16, complete sequence
          Length = 190202

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 614 cagtagtttgaagagatggaa 634
           |||||||||||||||||||||
Sbjct: 123 cagtagtttgaagagatggaa 143
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>gb|AF447035.1| Morina longifolia NADH dehydrogenase subunit F (ndhF) gene, partial
            cds; chloroplast
          Length = 2017

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 128  tttattcatctctgcaaaatt 148
            |||||||||||||||||||||
Sbjct: 1858 tttattcatctctgcaaaatt 1878
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>gb|AF130201.1|AF130201 Pittosporum tobira NADH dehydrogenase subunit F (ndhF) gene, complete
            cds; chloroplast gene for chloroplast product
          Length = 2241

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 128  tttattcatctctgcaaaatt 148
            |||||||||||||||||||||
Sbjct: 1883 tttattcatctctgcaaaatt 1903
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 49      caagaaaaatgagtgaacaaa 69
               |||||||||||||||||||||
Sbjct: 6156998 caagaaaaatgagtgaacaaa 6156978
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>dbj|AP005818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0009H03
          Length = 151685

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    caagaaaaatgagtgaacaaa 69
             |||||||||||||||||||||
Sbjct: 44898 caagaaaaatgagtgaacaaa 44878
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>dbj|AP005562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1190_B07
          Length = 140200

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 49   caagaaaaatgagtgaacaaa 69
            |||||||||||||||||||||
Sbjct: 2281 caagaaaaatgagtgaacaaa 2261
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>emb|AL928685.7| Zebrafish DNA sequence from clone CH211-139G14, complete sequence
          Length = 176893

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 31    aaaatgtgaagtacaacacaa 51
             |||||||||||||||||||||
Sbjct: 80711 aaaatgtgaagtacaacacaa 80691
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>emb|AL669834.10| Mouse DNA sequence from clone RP23-114O4 on chromosome 4, complete
             sequence
          Length = 147248

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 239   taaagatactgttttctttta 259
             |||||||||||||||||||||
Sbjct: 15967 taaagatactgttttctttta 15947
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>gb|AY675321.1| Homo sapiens CDC14 cell division cycle 14 homolog B (S. cerevisiae)
              (CDC14B) gene, complete cds
          Length = 133607

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    aaatatttattcatctctgc 142
              ||||||||||||||||||||
Sbjct: 109195 aaatatttattcatctctgc 109176
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>ref|XM_593831.2| PREDICTED: Bos taurus similar to solute carrier family 6 member 9
           isoform 2 (LOC515755), mRNA
          Length = 1650

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 493 catcaccaagagcacccagccttc 516
           ||||||||||||||| ||||||||
Sbjct: 648 catcaccaagagcacgcagccttc 671
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>gb|AC131756.3| Mus musculus BAC clone RP24-199J23 from chromosome 19, complete
             sequence
          Length = 175604

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 534   tctggcttttgcaagtacct 553
             ||||||||||||||||||||
Sbjct: 45160 tctggcttttgcaagtacct 45179
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>emb|AJ271361.2|FRU271361 Takifugu rubripes wnt2 (partial), frank1, cftr and frank2 (partial)
             genes
          Length = 60726

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    atgagtgaacaaatgtttcc 76
             ||||||||||||||||||||
Sbjct: 59874 atgagtgaacaaatgtttcc 59855
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>gb|AE014182.1| Mus musculus piebald deletion region section 10 of 11 of the complete
             sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 675   atgaaacttgtacttgataccaaa 698
             |||||||||||||||||| |||||
Sbjct: 96913 atgaaacttgtacttgattccaaa 96890
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>gb|AC010512.7| Homo sapiens chromosome 19 clone LLNLR-226F1, complete sequence
          Length = 39915

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  ggagggtggagggcctcgct 417
            ||||||||||||||||||||
Sbjct: 3052 ggagggtggagggcctcgct 3071
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>gb|AC093013.14| Homo sapiens 12 BAC RP11-158O15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 161114

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   actcatcttgtgatagtgag 476
             ||||||||||||||||||||
Sbjct: 30903 actcatcttgtgatagtgag 30884
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>gb|AC087333.2|AC087333 Takifugu rubripes clone 244C11, complete sequence
          Length = 78437

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    atgagtgaacaaatgtttcc 76
             ||||||||||||||||||||
Sbjct: 53713 atgagtgaacaaatgtttcc 53694
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>gb|AC158597.7| Mus musculus 10 BAC RP24-216E13 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 167526

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     aaatgagtgaacaaatgttt 74
              ||||||||||||||||||||
Sbjct: 128512 aaatgagtgaacaaatgttt 128531
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 626      gagatggaatggaacaaccc 645
                ||||||||||||||||||||
Sbjct: 28188964 gagatggaatggaacaaccc 28188945
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>gb|AC104596.4| Homo sapiens BAC clone RP11-54P19 from 4, complete sequence
          Length = 168591

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 589   cagctctaaatcatactcct 608
             ||||||||||||||||||||
Sbjct: 95191 cagctctaaatcatactcct 95210
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>gb|AC104689.4| Homo sapiens BAC clone RP11-158O16 from 4, complete sequence
          Length = 161428

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 457    actcatcttgtgatagtgag 476
              ||||||||||||||||||||
Sbjct: 130345 actcatcttgtgatagtgag 130364
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>gb|AC155714.6| Mus musculus 10 BAC RP24-165I13 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 167195

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    aaatgagtgaacaaatgttt 74
             ||||||||||||||||||||
Sbjct: 29269 aaatgagtgaacaaatgttt 29288
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>gb|AY640386.1| Calopsis viminea tRNA-Lys (trnK) gene, partial sequence; and
           maturase (matK) gene, complete cds; chloroplast
          Length = 2394

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 578 ttcattagaaccagctctaaatca 601
           ||||||||| ||||||||||||||
Sbjct: 187 ttcattagacccagctctaaatca 164
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>gb|AF319457.1|AF319457 Petroselinum crispum myosin subfamily VIII heavy chain mRNA, complete
            cds
          Length = 3986

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 593  tctaaatcatactcctcttg 612
            ||||||||||||||||||||
Sbjct: 1910 tctaaatcatactcctcttg 1891
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>gb|AC142260.6| Mus musculus BAC clone RP24-508M8 from chromosome 14, complete sequence
          Length = 148626

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 675   atgaaacttgtacttgataccaaa 698
             |||||||||||||||||| |||||
Sbjct: 52911 atgaaacttgtacttgattccaaa 52888
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>gb|AC084357.23| Homo sapiens 12q BAC RP11-415I12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188527

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     gaacaaatgtttccatgttt 82
              ||||||||||||||||||||
Sbjct: 103593 gaacaaatgtttccatgttt 103574
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>dbj|AP000735.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K13E13
          Length = 79186

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 531   aactctggcttttgcaagta 550
             ||||||||||||||||||||
Sbjct: 43080 aactctggcttttgcaagta 43061
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>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1717_A09
          Length = 203132

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 626    gagatggaatggaacaaccc 645
              ||||||||||||||||||||
Sbjct: 178611 gagatggaatggaacaaccc 178592
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>gb|AC007514.5|AC007514 Homo sapiens chromosome 14 clone BACs 209A20 and 396N8 map 14q31,
              complete sequence
          Length = 177720

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     atgagtgaacaaatgtttcc 76
              ||||||||||||||||||||
Sbjct: 161052 atgagtgaacaaatgtttcc 161033
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>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    acacctaaatatttattcat 136
              ||||||||||||||||||||
Sbjct: 139073 acacctaaatatttattcat 139092
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>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    acacctaaatatttattcat 136
              ||||||||||||||||||||
Sbjct: 261818 acacctaaatatttattcat 261799
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>emb|AL133477.16| Human DNA sequence from clone RP11-172F4 on chromosome 9q22.2-31.1
             Contains the 3' end of the CDC14B gene for the CDC14 cell
             division cycle 14 homolog B (S. cerevisiae) the HABP4 gene
             for hyaluronan binding protein 4, the gene for a novel
             protein similar to a zinc finger protein, TINP1
             pseudogene, a novel gene and three CpG islands, complete
             sequence
          Length = 139118

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   aaatatttattcatctctgc 142
             ||||||||||||||||||||
Sbjct: 14414 aaatatttattcatctctgc 14395


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,337,413
Number of Sequences: 3902068
Number of extensions: 7337413
Number of successful extensions: 137017
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136753
Number of HSP's gapped (non-prelim): 232
length of query: 701
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 678
effective length of database: 17,143,297,704
effective search space: 11623155843312
effective search space used: 11623155843312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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