ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags20h18 |
|---|---|
| Clone Library Name | barley_pub |
>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) Length = 364 Score = 212 bits (540), Expect(2) = 4e-59 Identities = 93/113 (82%), Positives = 105/113 (92%) Frame = -3 Query: 587 NMWAGWCVKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQAAKL 408 +MWAGWC+KVICDHLG GVKTGLPYIWHSKASNPFVNLKKEYKGIFWQE+IIPFFQAA L Sbjct: 239 DMWAGWCIKVICDHLGYGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQAATL 298 Query: 407 TKECDTVQKCYISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLNSKDSKE 249 +K+C +VQKCYI LS+QVKEKLG IDPYF+KLADAMVTW+EAWD +N+ S+E Sbjct: 299 SKDCTSVQKCYIELSKQVKEKLGTIDPYFIKLADAMVTWVEAWDEINNNKSEE 351 Score = 36.2 bits (82), Expect(2) = 4e-59 Identities = 19/34 (55%), Positives = 20/34 (58%) Frame = -2 Query: 687 MCGMNLRPSTASSSARPCTSGLMGDGQPIGRYDE 586 MCGMNL GLMGDGQPIGRYD+ Sbjct: 207 MCGMNLA-FNRELIGPAMYFGLMGDGQPIGRYDD 239
>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Amylogenin) (Golgi-associated protein se-wap41) Length = 364 Score = 209 bits (532), Expect(2) = 4e-58 Identities = 99/118 (83%), Positives = 102/118 (86%) Frame = -3 Query: 587 NMWAGWCVKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQAAKL 408 +MWAGWCVKVICDHL LGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQ + Sbjct: 246 DMWAGWCVKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNVTI 305 Query: 407 TKECDTVQKCYISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLNSKDSKEADANG 234 K+CDTVQKCYI LS QVKEKLG IDPYFVKL DAMVTWIEAWD LN S A ANG Sbjct: 306 PKDCDTVQKCYIYLSGQVKEKLGTIDPYFVKLGDAMVTWIEAWDELN--PSTPAAANG 361 Score = 35.8 bits (81), Expect(2) = 4e-58 Identities = 19/34 (55%), Positives = 20/34 (58%) Frame = -2 Query: 687 MCGMNLRPSTASSSARPCTSGLMGDGQPIGRYDE 586 MCGMNL GLMGDGQPIGRYD+ Sbjct: 214 MCGMNLA-FDRDLIGPAMYFGLMGDGQPIGRYDD 246
>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) Length = 365 Score = 200 bits (508), Expect(2) = 2e-55 Identities = 88/107 (82%), Positives = 96/107 (89%) Frame = -3 Query: 587 NMWAGWCVKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQAAKL 408 +MWAGWC KVICDHLGLG+KTGLPYIWHSKASNPFVNLKKEY GIFWQE+IIPFFQAA L Sbjct: 236 DMWAGWCTKVICDHLGLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEEIIPFFQAATL 295 Query: 407 TKECDTVQKCYISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLN 267 KEC TVQ+CY+ LS+QVK+KL IDPYF KL +AMVTWIEAWD LN Sbjct: 296 PKECTTVQQCYLELSKQVKKKLSSIDPYFTKLGEAMVTWIEAWDELN 342 Score = 35.8 bits (81), Expect(2) = 2e-55 Identities = 19/34 (55%), Positives = 20/34 (58%) Frame = -2 Query: 687 MCGMNLRPSTASSSARPCTSGLMGDGQPIGRYDE 586 MCGMNL GLMGDGQPIGRYD+ Sbjct: 204 MCGMNLA-FDRDLIGPAMYFGLMGDGQPIGRYDD 236
>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) Length = 366 Score = 199 bits (507), Expect(2) = 3e-55 Identities = 88/107 (82%), Positives = 98/107 (91%) Frame = -3 Query: 587 NMWAGWCVKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQAAKL 408 +MWAGWC+KVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGI+WQE+IIPF Q+A L Sbjct: 240 DMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEEIIPFSQSATL 299 Query: 407 TKECDTVQKCYISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLN 267 K+C +VQ+CY+ LS+QVKEKL IDPYF KLADAMVTWIEAWD LN Sbjct: 300 PKDCTSVQQCYLELSKQVKEKLSTIDPYFTKLADAMVTWIEAWDELN 346 Score = 35.8 bits (81), Expect(2) = 3e-55 Identities = 19/34 (55%), Positives = 20/34 (58%) Frame = -2 Query: 687 MCGMNLRPSTASSSARPCTSGLMGDGQPIGRYDE 586 MCGMNL GLMGDGQPIGRYD+ Sbjct: 208 MCGMNLA-FDRELIGPAMYFGLMGDGQPIGRYDD 240
>RIMB2_RAT (Q9JIR1) RIM-binding protein 2 (RIM-BP2)| Length = 1049 Score = 35.0 bits (79), Expect = 0.21 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Frame = +3 Query: 498 LAVPDVGQPRLDSEPKVVADHLNTP-AGPHVRRSVRWAGRRP*GPK--YMAGPMSSRSKG 668 L VP PR PK + ++T GPHV+ W RP GP +M P S G Sbjct: 582 LLVPPAPHPRTAPPPKPLTSDMDTKDLGPHVKVDESWEQSRPPGPAHGHMLEPPDMHSTG 641 Query: 669 EG 674 G Sbjct: 642 PG 643
>RIMB2_MOUSE (Q80U40) RIM-binding protein 2 (RIM-BP2)| Length = 1072 Score = 32.7 bits (73), Expect = 1.1 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 5/64 (7%) Frame = +3 Query: 498 LAVPDVGQPRLDSEPKVVADHLNTP---AGPHVRRSVRWAGRRP*GPK--YMAGPMSSRS 662 L VP PR PK +A ++T GPHV+ W R GP +M P S Sbjct: 599 LLVPPAPHPRTAPPPKPLASDMDTKDQHLGPHVKVDESWEQSRSPGPAHGHMLEPPDMHS 658 Query: 663 KGEG 674 G G Sbjct: 659 AGPG 662
>DDBX_BOVIN (P52898) Dihydrodiol dehydrogenase 3 (EC 1.-.-.-) (Prostaglandin F| synthase) Length = 323 Score = 31.2 bits (69), Expect = 3.1 Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 4/119 (3%) Frame = -3 Query: 659 PRAHRPGHVLRASWATASPSDATTNMWAGWCVKVICDHLGLGVKTGLPYIWHSKASNPFV 480 P A +PG L + P + ++ W C GL G+ H + Sbjct: 119 PVALKPGETLFPTDENGKPIFDSVDLCRTWEALEKCKDAGLTKSIGVSNFNHKQLEKILN 178 Query: 479 NLKKEYKGIFWQEDIIPFFQAAKLTKEC---DTVQKCYISL-SQQVKEKLGKIDPYFVK 315 +YK + Q + P+F +KL C D V Y +L SQ++KE + P+ ++ Sbjct: 179 KPGLKYKPVCNQVECHPYFNQSKLLDFCKSHDIVLVAYGALGSQRLKEWVNPNLPFLLE 237
>TECT3_HUMAN (Q6NUS6) Tectonic 3 precursor| Length = 607 Score = 30.0 bits (66), Expect = 6.9 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 517 GSPVLTPSPRWSQITLTHQPA 579 G P+LT P+WS I+L QPA Sbjct: 211 GDPILTYFPKWSVISLLRQPA 231
>TECT3_MACFA (Q4R9E0) Tectonic-3 precursor| Length = 608 Score = 30.0 bits (66), Expect = 6.9 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 517 GSPVLTPSPRWSQITLTHQPA 579 G P+LT P+WS I+L QPA Sbjct: 211 GDPILTYFPKWSVISLLRQPA 231 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,816,440 Number of Sequences: 219361 Number of extensions: 1507897 Number of successful extensions: 4289 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4284 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6825954960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
