ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20g21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predic... 408 e-110
2gb|AY103740.1| Zea mays PCO120652 mRNA sequence 404 e-109
3dbj|AK120719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 337 3e-89
4dbj|AK120713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 337 3e-89
5dbj|AK069716.1| Oryza sativa (japonica cultivar-group) cDNA clon... 337 3e-89
6dbj|AK061958.1| Oryza sativa (japonica cultivar-group) cDNA clon... 337 3e-89
7gb|BT017052.1| Zea mays clone EL01N0353H03.c mRNA sequence 329 7e-87
8gb|AY109245.1| Zea mays PCO147899 mRNA sequence 287 2e-74
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 232 1e-57
10dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic D... 232 1e-57
11dbj|AP002804.1| Oryza sativa (japonica cultivar-group) genomic D... 232 1e-57
12dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic D... 232 1e-57
13gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome... 167 6e-38
14gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome... 167 6e-38
15dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 167 6e-38
16gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 167 6e-38
17ref|NM_119298.2| Arabidopsis thaliana clathrin binding AT4G31490... 56 2e-04
18ref|XM_788019.1| PREDICTED: Strongylocentrotus purpuratus simila... 56 2e-04
19emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BA... 56 2e-04
20emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, ... 56 2e-04
21emb|AJ720879.1| Gallus gallus mRNA for hypothetical protein, clo... 50 0.010
22ref|NM_001006467.1| Gallus gallus coatomer protein complex, subu... 50 0.010
23ref|XM_370363.1| Magnaporthe grisea 70-15 chromosome II hypothet... 48 0.039
24gb|AC026791.4|AC026791 Homo sapiens chromosome 5 clone CTD-2265D... 48 0.039
25dbj|AB080596.1| Botryococcus braunii bCOP mRNA for coatomer subu... 48 0.039
26ref|NM_119297.2| Arabidopsis thaliana clathrin binding AT4G31480... 46 0.15
27gb|BC081657.1| Danio rerio coatomer protein complex, subunit bet... 46 0.15
28gb|AC145952.3| Pan troglodytes BAC clone RP43-18D16 from 7, comp... 46 0.15
29gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, com... 46 0.15
30gb|AC113010.10| Mus musculus chromosome 18, clone RP23-172F6, co... 46 0.15
31ref|XM_793895.1| PREDICTED: Strongylocentrotus purpuratus simila... 46 0.15
32gb|BC100179.1| Xenopus laevis cDNA clone MGC:114704 IMAGE:663406... 46 0.15
33ref|XM_691860.1| PREDICTED: Danio rerio similar to Coatomer prot... 46 0.15
34dbj|AK221668.1| Arabidopsis thaliana mRNA for putative protein, ... 46 0.15
35ref|NM_001002013.1| Danio rerio coatomer protein complex, subuni... 46 0.15
36emb|BX005056.7| Zebrafish DNA sequence from clone CH211-77A11 in... 46 0.15
37gb|AY294010.1| Danio rerio coatomer protein complex subunit beta... 46 0.15
38emb|AL953895.8| Zebrafish DNA sequence from clone CH211-231M14 i... 46 0.15
39gb|AY244453.1| Halichondria panicea microsatellite Hapa28 sequence 44 0.61
40emb|AJ632317.1| Cotesia congregata virus complete genome, segmen... 44 0.61
41emb|AJ640104.1| Cotesia congregata virus proviral CcBV PTPU gene... 44 0.61
42gb|AC121353.2| Rattus norvegicus chromosome 1 clone RP32-274I11 ... 42 2.4
43ref|XM_723907.1| Plasmodium yoelii yoelii str. 17XNL coatomer su... 42 2.4
44gb|AF212132.1| Bombyx mandarina mariner transposon Bmamar2 trans... 42 2.4
45emb|AL732560.11| Mouse DNA sequence from clone RP24-209P15 on ch... 42 2.4
46ref|NM_001016394.2| Xenopus tropicalis hypothetical protein LOC5... 40 9.5
47gb|AY746406.1| Poncirus trifoliata resistance protein-like prote... 40 9.5
48gb|AC131577.16| Mus musculus chromosome 1, clone RP23-23I4, comp... 40 9.5
49gb|AC122221.4| Mus musculus BAC clone RP23-128B1 from chromosome... 40 9.5
50ref|XM_615637.2| PREDICTED: Bos taurus similar to coatomer prote... 40 9.5
51ref|XM_865359.1| PREDICTED: Bos taurus similar to coatomer prote... 40 9.5
52ref|XM_875628.1| PREDICTED: Bos taurus similar to coatomer prote... 40 9.5
53ref|XM_323756.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.5
54ref|XM_952388.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.5
55gb|AC147885.2| Xenopus tropicalis clone CH216-12C9, complete seq... 40 9.5
56gb|AF025465.1| Caenorhabditis elegans cosmid K02E7, complete seq... 40 9.5
57gb|AC091465.7| Mus musculus chromosome 1, clone RP23-221K1, comp... 40 9.5
58ref|XM_754415.1| Ustilago maydis 521 hypothetical protein (UM033... 40 9.5
59emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 9.5
60ref|XM_382956.1| Gibberella zeae PH-1 chromosome 1 conserved hyp... 40 9.5
61ref|XM_854550.1| PREDICTED: Canis familiaris similar to senataxi... 40 9.5
62ref|XM_537811.2| PREDICTED: Canis familiaris similar to senataxi... 40 9.5
63gb|AC146207.3| Pan troglodytes BAC clone RP43-25M19 from 7, comp... 40 9.5
64gb|AC146051.2| Pan troglodytes BAC clone RP43-73B15 from 7, comp... 40 9.5
65ref|XM_721098.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 9.5
66gb|AC073112.6| Homo sapiens BAC clone RP11-555P19 from 7, comple... 40 9.5
67emb|BX908809.1| Neurospora crassa DNA linkage group IV Cosmid co... 40 9.5
68gb|AC098848.7| Homo sapiens chromosome 18, clone RP11-839G9, com... 40 9.5
69gb|AC089996.12| Homo sapiens 12 BAC RP11-76M15 (Roswell Park Can... 40 9.5
70gb|AC105204.5| Homo sapiens chromosome 15, clone RP11-1087J2, co... 40 9.5
71gb|AC112724.3| Homo sapiens BAC clone RP11-811L19 from 4, comple... 40 9.5
72gb|AC090259.5| Homo sapiens chromosome 15, clone RP11-424E9, com... 40 9.5
73gb|AC100825.2| Homo sapiens chromosome 15, clone RP11-1152M12, c... 40 9.5
74gb|AC090643.22| Homo sapiens 12q BAC RP11-489P6 (Roswell Park Ca... 40 9.5
75gb|AC079208.4| Homo sapiens chromosome 15, clone RP11-1149K15, c... 40 9.5
76ref|XM_694569.1| PREDICTED: Danio rerio similar to egf-like modu... 40 9.5
77gb|AC068207.6| Homo sapiens chromosome 8, clone RP11-26K8, compl... 40 9.5
78gb|AC020783.8| Homo sapiens chromosome 8, clone RP11-16M2, compl... 40 9.5
79gb|AC013551.10| Homo sapiens chromosome 15, clone RP11-133P13, c... 40 9.5
80dbj|AB168330.1| Macaca fascicularis testis cDNA clone: QtsA-1128... 40 9.5
81gb|AC016370.17|AC016370 Homo sapiens chromosome 15 clone RP11-42... 40 9.5
82gb|U80843.2| Caenorhabditis elegans cosmid C32B5, complete sequence 40 9.5
83gb|AC150280.2| Pan troglodytes BAC clone CH251-20M5 from chromos... 40 9.5
84gb|AC006030.2| Homo sapiens BAC clone RP11-1P9 from 2, complete ... 40 9.5
85gb|AC119189.8| Mus musculus chromosome 1, clone RP24-178E16, com... 40 9.5
86gb|AC147873.3| Monodelphis domestica clone VMRC6-582D4, complete... 40 9.5
87emb|CR761165.2| Xenopus tropicalis finished cDNA, clone TEgg054k06 40 9.5
88dbj|AP006305.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 9.5
89gb|AC115876.18| Mus musculus chromosome 1, clone RP24-356G6, com... 40 9.5
90gb|AC125525.3| Mus musculus BAC clone RP24-395H10 from 1, comple... 40 9.5
91gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold 40 9.5
92emb|AL670035.15| Mouse DNA sequence from clone RP23-295C20 on ch... 40 9.5
93dbj|AP000072.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 40 9.5
94dbj|AP001577.3| Homo sapiens genomic DNA, chromosome 6q25.2, clo... 40 9.5 
>ref|XM_462832.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3111

 Score =  408 bits (206), Expect = e-110
 Identities = 343/386 (88%), Gaps = 2/386 (0%)
 Strand = Plus / Minus

                                                                        
Query: 309  ttaactgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttg 368
            ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||
Sbjct: 3111 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 3052

                                                                        
Query: 369  tgtcttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgct 428
             ||||||||||||||||||||||||||||| ||||||||||| |  |||||||| |||||
Sbjct: 3051 ggtcttgctccttattctgatgtaaccactgagcttgccatcaaactgcttctcgatgct 2992

                                                                        
Query: 429  gatgttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgta 488
            ||| || |||||||||||||| ||||| |||||||| |||||||| ||||| || |   |
Sbjct: 2991 gatatttaccaaagcatcttcaccgaaaacactctttgcataaaggttagcggcgagaaa 2932

                                                                        
Query: 489  accgcattccccgtcaagcgcagactgtggtgttagacacttcatatttgttgacttgat 548
            ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 2931 accgcattctccgtcaagcgcagacggtggtgttagacacttcatgtttgttgacttgat 2872

                                                                        
Query: 549  aacatgactcaaaaatttcttctcatcttgaattacagtattcactgcaacccttgtttt 608
             | ||||  |||||| | ||||||||  ||||| |||||||||||||| | |||||||||
Sbjct: 2871 gatatgatccaaaaactccttctcattctgaatgacagtattcactgcca-ccttgtttt 2813

                                                                        
Query: 609  cccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtggag 668
            |||||||||| |||||||||||||| |||||||||||||| ||||| || || ||| |||
Sbjct: 2812 cccactcaaattctgcccacatgttacggaaagtaacatcagcgcaagttgctggt-gag 2754

                                      
Query: 669  atgtaatccatgatgtcaatgtgaat 694
            || |||||||||||||||||||||||
Sbjct: 2753 atataatccatgatgtcaatgtgaat 2728
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>gb|AY103740.1| Zea mays PCO120652 mRNA sequence
          Length = 1013

 Score =  404 bits (204), Expect = e-109
 Identities = 347/392 (88%), Gaps = 2/392 (0%)
 Strand = Plus / Minus

                                                                       
Query: 303 tcaaaattaactgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgat 362
           ||||| ||||||||| |||||||||||||| |||||||| || || |||||||| || ||
Sbjct: 637 tcaaagttaactgccacccttctgcttgagagtaatcttgtcacctaagctgagtgcaat 578

                                                                       
Query: 363 tccttgtgtcttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctc 422
           ||| || |||||||||||||||| |||||||||||| |||||||||||   |||||||||
Sbjct: 577 tccctgggtcttgctccttattcggatgtaaccactgagcttgccatcatgttgcttctc 518

                                                                       
Query: 423 aatgctgatgttcaccaaagcatcttctccgaacacactcttggcataaagattagcagc 482
           |||||||||||||||||||||||| || || ||||||||||| |||||||||||||||||
Sbjct: 517 aatgctgatgttcaccaaagcatcctcaccaaacacactctttgcataaagattagcagc 458

                                                                       
Query: 483 aatgtaaccgcattccccgtcaagcgcagactgtggtgttagacacttcatatttgttga 542
           || | |||| ||||| ||||| || |||||| ||||||| ||||||||||| ||||||||
Sbjct: 457 aaggaaaccacattctccgtctagtgcagacggtggtgtcagacacttcatgtttgttga 398

                                                                       
Query: 543 cttgataacatgactcaaaaatttcttctcatcttgaattacagtattcactgcaaccct 602
           ||||||||  ||| |||| |||| |||||| |||||||| |||||||||||||| | |||
Sbjct: 397 cttgataatgtgattcaagaattccttctcgtcttgaatcacagtattcactgcca-cct 339

                                                                       
Query: 603 tgttttcccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtagcag 662
           | |||||||| ||||| ||||||||||||||||||||||||||||| || || |||||||
Sbjct: 338 tattttcccattcaaattctgcccacatgttccggaaagtaacatcagcacaggtagcag 279

                                           
Query: 663 gtggagatgtaatccatgatgtcaatgtgaat 694
           || |||||||||||||||||||| ||||||||
Sbjct: 278 gt-gagatgtaatccatgatgtcgatgtgaat 248
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>dbj|AK120719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G07, full
            insert sequence
          Length = 3332

 Score =  337 bits (170), Expect = 3e-89
 Identities = 331/382 (86%), Gaps = 2/382 (0%)
 Strand = Plus / Minus

                                                                        
Query: 313  ctgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttgtgtc 372
            |||||||||||||| |||||||| ||||| || || |||||||| ||||||||||| |||
Sbjct: 2968 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 2909

                                                                        
Query: 373  ttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgctgatg 432
            || |||| ||||||||| || ||||| ||||||||||||  |||||| |||| |||||||
Sbjct: 2908 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 2849

                                                                        
Query: 433  ttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgtaaccg 492
            |||||||| ||||| || || || |||||||||||||| ||||||||||| ||  | || 
Sbjct: 2848 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 2789

                                                                        
Query: 493  cattccccgtcaagcgcagactgtggtgttagacacttcatatttgttgacttgataaca 552
            ||||| || |||||||||||  ||||||||||||||||||||||||| || ||||| | |
Sbjct: 2788 cattctccatcaagcgcagatggtggtgttagacacttcatatttgtcgatttgatgata 2729

                                                                        
Query: 553  tgactcaaaaatttcttctcatcttgaattacagtattcactgcaacccttgttttccca 612
            |||  |||||||| ||||||||| ||||| ||||| ||||| || | |||||||||||||
Sbjct: 2728 tgatccaaaaattccttctcatcctgaatgacagtgttcacagcca-ccttgttttccca 2670

                                                                        
Query: 613  ctcaaactctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtggagatgt 672
            |||||| |||||||||||||||||||||| |||||| || || ||||||||| ||||| |
Sbjct: 2669 ctcaaattctgcccacatgttccggaaagcaacatcggcacaagtagcaggt-gagatat 2611

                                  
Query: 673  aatccatgatgtcaatgtgaat 694
            ||||||||||||||||||||||
Sbjct: 2610 aatccatgatgtcaatgtgaat 2589
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>dbj|AK120713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002A09, full
            insert sequence
          Length = 3332

 Score =  337 bits (170), Expect = 3e-89
 Identities = 331/382 (86%), Gaps = 2/382 (0%)
 Strand = Plus / Minus

                                                                        
Query: 313  ctgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttgtgtc 372
            |||||||||||||| |||||||| ||||| || || |||||||| ||||||||||| |||
Sbjct: 2968 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 2909

                                                                        
Query: 373  ttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgctgatg 432
            || |||| ||||||||| || ||||| ||||||||||||  |||||| |||| |||||||
Sbjct: 2908 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 2849

                                                                        
Query: 433  ttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgtaaccg 492
            |||||||| ||||| || || || |||||||||||||| ||||||||||| ||  | || 
Sbjct: 2848 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 2789

                                                                        
Query: 493  cattccccgtcaagcgcagactgtggtgttagacacttcatatttgttgacttgataaca 552
            ||||| || |||||||||||  ||||||||||||||||||||||||| || ||||| | |
Sbjct: 2788 cattctccatcaagcgcagatggtggtgttagacacttcatatttgtcgatttgatgata 2729

                                                                        
Query: 553  tgactcaaaaatttcttctcatcttgaattacagtattcactgcaacccttgttttccca 612
            |||  |||||||| ||||||||| ||||| ||||| ||||| || | |||||||||||||
Sbjct: 2728 tgatccaaaaattccttctcatcctgaatgacagtgttcacagcca-ccttgttttccca 2670

                                                                        
Query: 613  ctcaaactctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtggagatgt 672
            |||||| |||||||||||||||||||||| |||||| || || ||||||||| ||||| |
Sbjct: 2669 ctcaaattctgcccacatgttccggaaagcaacatcggcacaagtagcaggt-gagatat 2611

                                  
Query: 673  aatccatgatgtcaatgtgaat 694
            ||||||||||||||||||||||
Sbjct: 2610 aatccatgatgtcaatgtgaat 2589
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>dbj|AK069716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F21, full
            insert sequence
          Length = 3363

 Score =  337 bits (170), Expect = 3e-89
 Identities = 331/382 (86%), Gaps = 2/382 (0%)
 Strand = Plus / Minus

                                                                        
Query: 313  ctgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttgtgtc 372
            |||||||||||||| |||||||| ||||| || || |||||||| ||||||||||| |||
Sbjct: 2999 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 2940

                                                                        
Query: 373  ttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgctgatg 432
            || |||| ||||||||| || ||||| ||||||||||||  |||||| |||| |||||||
Sbjct: 2939 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 2880

                                                                        
Query: 433  ttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgtaaccg 492
            |||||||| ||||| || || || |||||||||||||| ||||||||||| ||  | || 
Sbjct: 2879 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 2820

                                                                        
Query: 493  cattccccgtcaagcgcagactgtggtgttagacacttcatatttgttgacttgataaca 552
            ||||| || |||||||||||  ||||||||||||||||||||||||| || ||||| | |
Sbjct: 2819 cattctccatcaagcgcagatggtggtgttagacacttcatatttgtcgatttgatgata 2760

                                                                        
Query: 553  tgactcaaaaatttcttctcatcttgaattacagtattcactgcaacccttgttttccca 612
            |||  |||||||| ||||||||| ||||| ||||| ||||| || | |||||||||||||
Sbjct: 2759 tgatccaaaaattccttctcatcctgaatgacagtgttcacagcca-ccttgttttccca 2701

                                                                        
Query: 613  ctcaaactctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtggagatgt 672
            |||||| |||||||||||||||||||||| |||||| || || ||||||||| ||||| |
Sbjct: 2700 ctcaaattctgcccacatgttccggaaagcaacatcggcacaagtagcaggt-gagatat 2642

                                  
Query: 673  aatccatgatgtcaatgtgaat 694
            ||||||||||||||||||||||
Sbjct: 2641 aatccatgatgtcaatgtgaat 2620
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>dbj|AK061958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F11, full
            insert sequence
          Length = 1741

 Score =  337 bits (170), Expect = 3e-89
 Identities = 331/382 (86%), Gaps = 2/382 (0%)
 Strand = Plus / Minus

                                                                        
Query: 313  ctgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttgtgtc 372
            |||||||||||||| |||||||| ||||| || || |||||||| ||||||||||| |||
Sbjct: 1377 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 1318

                                                                        
Query: 373  ttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgctgatg 432
            || |||| ||||||||| || ||||| ||||||||||||  |||||| |||| |||||||
Sbjct: 1317 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 1258

                                                                        
Query: 433  ttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgtaaccg 492
            |||||||| ||||| || || || |||||||||||||| ||||||||||| ||  | || 
Sbjct: 1257 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 1198

                                                                        
Query: 493  cattccccgtcaagcgcagactgtggtgttagacacttcatatttgttgacttgataaca 552
            ||||| || |||||||||||  ||||||||||||||||||||||||| || ||||| | |
Sbjct: 1197 cattctccatcaagcgcagatggtggtgttagacacttcatatttgtcgatttgatgata 1138

                                                                        
Query: 553  tgactcaaaaatttcttctcatcttgaattacagtattcactgcaacccttgttttccca 612
            |||  |||||||| ||||||||| ||||| ||||| ||||| || | |||||||||||||
Sbjct: 1137 tgatccaaaaattccttctcatcctgaatgacagtgttcacagcca-ccttgttttccca 1079

                                                                        
Query: 613  ctcaaactctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtggagatgt 672
            |||||| |||||||||||||||||||||| |||||| || || ||||||||| ||||| |
Sbjct: 1078 ctcaaattctgcccacatgttccggaaagcaacatcggcacaagtagcaggt-gagatat 1020

                                  
Query: 673  aatccatgatgtcaatgtgaat 694
            ||||||||||||||||||||||
Sbjct: 1019 aatccatgatgtcaatgtgaat 998
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>gb|BT017052.1| Zea mays clone EL01N0353H03.c mRNA sequence
          Length = 1032

 Score =  329 bits (166), Expect = 7e-87
 Identities = 333/386 (86%), Gaps = 2/386 (0%)
 Strand = Plus / Minus

                                                                       
Query: 309 ttaactgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttg 368
           ||||||||| || ||||||||||| || ||||| || || |||||||| || ||||| ||
Sbjct: 638 ttaactgccacctttctgcttgagagtgatcttgtcccctaagctgagtgcaattccctg 579

                                                                       
Query: 369 tgtcttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgct 428
            ||||||||||||||||  ||||| ||||| |||||||| ||   |||||||||||||||
Sbjct: 578 ggtcttgctccttattcgaatgtagccactgagcttgccgtcatgttgcttctcaatgct 519

                                                                       
Query: 429 gatgttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgta 488
           ||||||||||||||| || || || ||||||||||| |||||||| |||||||||| | |
Sbjct: 518 gatgttcaccaaagcgtcctcgccaaacacactctttgcataaaggttagcagcaaggaa 459

                                                                       
Query: 489 accgcattccccgtcaagcgcagactgtggtgttagacacttcatatttgttgacttgat 548
           ||| |||||||| || || |||||| ||||||| ||||| ||||| || |||||||||||
Sbjct: 458 accacattccccatccagtgcagacggtggtgtcagacatttcatgttcgttgacttgat 399

                                                                       
Query: 549 aacatgactcaaaaatttcttctcatcttgaattacagtattcactgcaacccttgtttt 608
           ||  ||| |||| |||| ||||||||| ||||| ||||||||||| || | |||| ||||
Sbjct: 398 aatgtgattcaagaattccttctcatcctgaatcacagtattcacagcca-ccttatttt 340

                                                                       
Query: 609 cccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtggag 668
           |||| ||||| |||||||||||||||||||||||||||||||| || ||||||||| |||
Sbjct: 339 cccattcaaattctgcccacatgttccggaaagtaacatctgcacacgtagcaggt-gag 281

                                     
Query: 669 atgtaatccatgatgtcaatgtgaat 694
           ||||||||||||||||| ||||||||
Sbjct: 280 atgtaatccatgatgtcgatgtgaat 255
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>gb|AY109245.1| Zea mays PCO147899 mRNA sequence
          Length = 751

 Score =  287 bits (145), Expect = 2e-74
 Identities = 324/381 (85%), Gaps = 2/381 (0%)
 Strand = Plus / Minus

                                                                       
Query: 314 tgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttgtgtct 373
           ||||||||||||| || ||||| ||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 711 tgcctcccttctgttttagggtgatcttgtctcctaagctgagcgcaattccttgggtct 652

                                                                       
Query: 374 tgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgctgatgt 433
           |||| ||||| |||||||| ||| | | ||||||||||   ||||||||||  ||||| |
Sbjct: 651 tgcttcttatcctgatgtagccagtcaacttgccatcggcctgcttctcaacactgatat 592

                                                                       
Query: 434 tcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgtaaccgc 493
           |||||| ||| || || || ||||||||||||||||| ||||| ||||||| | | || |
Sbjct: 591 tcaccagagcgtcctcgccaaacacactcttggcatagagatttgcagcaaggaacccac 532

                                                                       
Query: 494 attccccgtcaagcgcagactgtggtgttagacacttcatatttgttgacttgataacat 553
           |||| || || ||||||||  ||||||||||||||||||| ||||| ||||| |||| ||
Sbjct: 531 attctccatcgagcgcagatggtggtgttagacacttcatgtttgtggacttaataatat 472

                                                                       
Query: 554 gactcaaaaatttcttctcatcttgaattacagtattcactgcaacccttgttttcccac 613
           || |||| |||| ||||||||| || || ||||||||||| || | |||| |||||||||
Sbjct: 471 gattcaagaattccttctcatcctggatcacagtattcaccgcca-ccttattttcccac 413

                                                                       
Query: 614 tcaaactctgcccacatgttccggaaagtaacatctgcgcatgtagcaggtggagatgta 673
           ||||| |||||||||||||||||||| | |||||| || |||||||||||| ||||||||
Sbjct: 412 tcaaattctgcccacatgttccggaatgcaacatcagcacatgtagcaggt-gagatgta 354

                                
Query: 674 atccatgatgtcaatgtgaat 694
           |||||| || |||||||||||
Sbjct: 353 atccataatatcaatgtgaat 333
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  232 bits (117), Expect = 1e-57
 Identities = 183/205 (89%)
 Strand = Plus / Plus

                                                                            
Query: 309      ttaactgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttg 368
                ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||
Sbjct: 10020837 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 10020896

                                                                            
Query: 369      tgtcttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgct 428
                 ||||||||||||||||||||||||||||| ||||||||||| |  |||||||| |||||
Sbjct: 10020897 ggtcttgctccttattctgatgtaaccactgagcttgccatcaaactgcttctcgatgct 10020956

                                                                            
Query: 429      gatgttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgta 488
                ||| || |||||||||||||| ||||| |||||||| |||||||| ||||| || |   |
Sbjct: 10020957 gatatttaccaaagcatcttcaccgaaaacactctttgcataaaggttagcggcgagaaa 10021016

                                         
Query: 489      accgcattccccgtcaagcgcagac 513
                ||||||||| |||||||||||||||
Sbjct: 10021017 accgcattctccgtcaagcgcagac 10021041



 Score =  117 bits (59), Expect = 5e-23
 Identities = 87/95 (91%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                            
Query: 600      ccttgttttcccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtag 659
                ||||||||||||||||||| |||||||||||||| |||||||||||||| ||||| || |
Sbjct: 10022551 ccttgttttcccactcaaattctgcccacatgttacggaaagtaacatcagcgcaagttg 10022610

                                                   
Query: 660      caggtggagatgtaatccatgatgtcaatgtgaat 694
                | ||| ||||| |||||||||||||||||||||||
Sbjct: 10022611 ctggt-gagatataatccatgatgtcaatgtgaat 10022644



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                            
Query: 515      gtggtgttagacacttcatatttgttgacttgataacatgactcaaaaatttcttctcat 574
                ||||||||||||||||||| |||||||||||||| | ||||  |||||| | ||||||||
Sbjct: 10021747 gtggtgttagacacttcatgtttgttgacttgatgatatgatccaaaaactccttctcat 10021806

                                      
Query: 575      cttgaattacagtattcactgc 596
                  ||||| ||||||||||||||
Sbjct: 10021807 tctgaatgacagtattcactgc 10021828
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>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F09
          Length = 132713

 Score =  232 bits (117), Expect = 1e-57
 Identities = 183/205 (89%)
 Strand = Plus / Plus

                                                                          
Query: 309    ttaactgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttg 368
              ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||
Sbjct: 101119 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 101178

                                                                          
Query: 369    tgtcttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgct 428
               ||||||||||||||||||||||||||||| ||||||||||| |  |||||||| |||||
Sbjct: 101179 ggtcttgctccttattctgatgtaaccactgagcttgccatcaaactgcttctcgatgct 101238

                                                                          
Query: 429    gatgttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgta 488
              ||| || |||||||||||||| ||||| |||||||| |||||||| ||||| || |   |
Sbjct: 101239 gatatttaccaaagcatcttcaccgaaaacactctttgcataaaggttagcggcgagaaa 101298

                                       
Query: 489    accgcattccccgtcaagcgcagac 513
              ||||||||| |||||||||||||||
Sbjct: 101299 accgcattctccgtcaagcgcagac 101323



 Score =  117 bits (59), Expect = 5e-23
 Identities = 87/95 (91%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                          
Query: 600    ccttgttttcccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtag 659
              ||||||||||||||||||| |||||||||||||| |||||||||||||| ||||| || |
Sbjct: 102833 ccttgttttcccactcaaattctgcccacatgttacggaaagtaacatcagcgcaagttg 102892

                                                 
Query: 660    caggtggagatgtaatccatgatgtcaatgtgaat 694
              | ||| ||||| |||||||||||||||||||||||
Sbjct: 102893 ctggt-gagatataatccatgatgtcaatgtgaat 102926



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                          
Query: 515    gtggtgttagacacttcatatttgttgacttgataacatgactcaaaaatttcttctcat 574
              ||||||||||||||||||| |||||||||||||| | ||||  |||||| | ||||||||
Sbjct: 102029 gtggtgttagacacttcatgtttgttgacttgatgatatgatccaaaaactccttctcat 102088

                                    
Query: 575    cttgaattacagtattcactgc 596
                ||||| ||||||||||||||
Sbjct: 102089 tctgaatgacagtattcactgc 102110
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>dbj|AP002804.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0021A04
          Length = 50487

 Score =  232 bits (117), Expect = 1e-57
 Identities = 183/205 (89%)
 Strand = Plus / Plus

                                                                         
Query: 309   ttaactgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttg 368
             ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||
Sbjct: 48394 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 48453

                                                                         
Query: 369   tgtcttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgct 428
              ||||||||||||||||||||||||||||| ||||||||||| |  |||||||| |||||
Sbjct: 48454 ggtcttgctccttattctgatgtaaccactgagcttgccatcaaactgcttctcgatgct 48513

                                                                         
Query: 429   gatgttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgta 488
             ||| || |||||||||||||| ||||| |||||||| |||||||| ||||| || |   |
Sbjct: 48514 gatatttaccaaagcatcttcaccgaaaacactctttgcataaaggttagcggcgagaaa 48573

                                      
Query: 489   accgcattccccgtcaagcgcagac 513
             ||||||||| |||||||||||||||
Sbjct: 48574 accgcattctccgtcaagcgcagac 48598



 Score =  117 bits (59), Expect = 5e-23
 Identities = 87/95 (91%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                         
Query: 600   ccttgttttcccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtag 659
             ||||||||||||||||||| |||||||||||||| |||||||||||||| ||||| || |
Sbjct: 50108 ccttgttttcccactcaaattctgcccacatgttacggaaagtaacatcagcgcaagttg 50167

                                                
Query: 660   caggtggagatgtaatccatgatgtcaatgtgaat 694
             | ||| ||||| |||||||||||||||||||||||
Sbjct: 50168 ctggt-gagatataatccatgatgtcaatgtgaat 50201



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                         
Query: 515   gtggtgttagacacttcatatttgttgacttgataacatgactcaaaaatttcttctcat 574
             ||||||||||||||||||| |||||||||||||| | ||||  |||||| | ||||||||
Sbjct: 49304 gtggtgttagacacttcatgtttgttgacttgatgatatgatccaaaaactccttctcat 49363

                                   
Query: 575   cttgaattacagtattcactgc 596
               ||||| ||||||||||||||
Sbjct: 49364 tctgaatgacagtattcactgc 49385
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>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0036E02
          Length = 145931

 Score =  232 bits (117), Expect = 1e-57
 Identities = 183/205 (89%)
 Strand = Plus / Plus

                                                                          
Query: 309    ttaactgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttg 368
              ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||
Sbjct: 115330 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 115389

                                                                          
Query: 369    tgtcttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgct 428
               ||||||||||||||||||||||||||||| ||||||||||| |  |||||||| |||||
Sbjct: 115390 ggtcttgctccttattctgatgtaaccactgagcttgccatcaaactgcttctcgatgct 115449

                                                                          
Query: 429    gatgttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgta 488
              ||| || |||||||||||||| ||||| |||||||| |||||||| ||||| || |   |
Sbjct: 115450 gatatttaccaaagcatcttcaccgaaaacactctttgcataaaggttagcggcgagaaa 115509

                                       
Query: 489    accgcattccccgtcaagcgcagac 513
              ||||||||| |||||||||||||||
Sbjct: 115510 accgcattctccgtcaagcgcagac 115534



 Score =  117 bits (59), Expect = 5e-23
 Identities = 87/95 (91%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                          
Query: 600    ccttgttttcccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtag 659
              ||||||||||||||||||| |||||||||||||| |||||||||||||| ||||| || |
Sbjct: 117044 ccttgttttcccactcaaattctgcccacatgttacggaaagtaacatcagcgcaagttg 117103

                                                 
Query: 660    caggtggagatgtaatccatgatgtcaatgtgaat 694
              | ||| ||||| |||||||||||||||||||||||
Sbjct: 117104 ctggt-gagatataatccatgatgtcaatgtgaat 117137



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                          
Query: 515    gtggtgttagacacttcatatttgttgacttgataacatgactcaaaaatttcttctcat 574
              ||||||||||||||||||| |||||||||||||| | ||||  |||||| | ||||||||
Sbjct: 116240 gtggtgttagacacttcatgtttgttgacttgatgatatgatccaaaaactccttctcat 116299

                                    
Query: 575    cttgaattacagtattcactgc 596
                ||||| ||||||||||||||
Sbjct: 116300 tctgaatgacagtattcactgc 116321
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>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0063D09 map S1559, complete sequence
          Length = 190721

 Score =  167 bits (84), Expect = 6e-38
 Identities = 171/200 (85%)
 Strand = Plus / Plus

                                                                         
Query: 313   ctgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttgtgtc 372
             |||||||||||||| |||||||| ||||| || || |||||||| ||||||||||| |||
Sbjct: 16550 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 16609

                                                                         
Query: 373   ttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgctgatg 432
             || |||| ||||||||| || ||||| ||||||||||||  |||||| |||| |||||||
Sbjct: 16610 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 16669

                                                                         
Query: 433   ttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgtaaccg 492
             |||||||| ||||| || || || |||||||||||||| ||||||||||| ||  | || 
Sbjct: 16670 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 16729

                                 
Query: 493   cattccccgtcaagcgcaga 512
             ||||| || |||||||||||
Sbjct: 16730 cattctccatcaagcgcaga 16749



 Score =  125 bits (63), Expect = 2e-25
 Identities = 88/95 (92%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                         
Query: 600   ccttgttttcccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtag 659
             ||||||||||||||||||| |||||||||||||||||||||| |||||| || || ||||
Sbjct: 17977 ccttgttttcccactcaaattctgcccacatgttccggaaagcaacatcggcacaagtag 18036

                                                
Query: 660   caggtggagatgtaatccatgatgtcaatgtgaat 694
             ||||| ||||| |||||||||||||||||||||||
Sbjct: 18037 caggt-gagatataatccatgatgtcaatgtgaat 18070



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                         
Query: 515   gtggtgttagacacttcatatttgttgacttgataacatgactcaaaaatttcttctcat 574
             ||||||||||||||||||||||||| || ||||| | ||||  |||||||| ||||||||
Sbjct: 17514 gtggtgttagacacttcatatttgtcgatttgatgatatgatccaaaaattccttctcat 17573

                                
Query: 575   cttgaattacagtattcac 593
             | ||||| ||||| |||||
Sbjct: 17574 cctgaatgacagtgttcac 17592
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>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055G24
              map S20116S, complete sequence
          Length = 174210

 Score =  167 bits (84), Expect = 6e-38
 Identities = 171/200 (85%)
 Strand = Plus / Plus

                                                                          
Query: 313    ctgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttgtgtc 372
              |||||||||||||| |||||||| ||||| || || |||||||| ||||||||||| |||
Sbjct: 166015 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 166074

                                                                          
Query: 373    ttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgctgatg 432
              || |||| ||||||||| || ||||| ||||||||||||  |||||| |||| |||||||
Sbjct: 166075 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 166134

                                                                          
Query: 433    ttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgtaaccg 492
              |||||||| ||||| || || || |||||||||||||| ||||||||||| ||  | || 
Sbjct: 166135 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 166194

                                  
Query: 493    cattccccgtcaagcgcaga 512
              ||||| || |||||||||||
Sbjct: 166195 cattctccatcaagcgcaga 166214



 Score =  125 bits (63), Expect = 2e-25
 Identities = 88/95 (92%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                          
Query: 600    ccttgttttcccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtag 659
              ||||||||||||||||||| |||||||||||||||||||||| |||||| || || ||||
Sbjct: 167442 ccttgttttcccactcaaattctgcccacatgttccggaaagcaacatcggcacaagtag 167501

                                                 
Query: 660    caggtggagatgtaatccatgatgtcaatgtgaat 694
              ||||| ||||| |||||||||||||||||||||||
Sbjct: 167502 caggt-gagatataatccatgatgtcaatgtgaat 167535



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                          
Query: 515    gtggtgttagacacttcatatttgttgacttgataacatgactcaaaaatttcttctcat 574
              ||||||||||||||||||||||||| || ||||| | ||||  |||||||| ||||||||
Sbjct: 166979 gtggtgttagacacttcatatttgtcgatttgatgatatgatccaaaaattccttctcat 167038

                                 
Query: 575    cttgaattacagtattcac 593
              | ||||| ||||| |||||
Sbjct: 167039 cctgaatgacagtgttcac 167057
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  167 bits (84), Expect = 6e-38
 Identities = 171/200 (85%)
 Strand = Plus / Plus

                                                                           
Query: 313     ctgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttgtgtc 372
               |||||||||||||| |||||||| ||||| || || |||||||| ||||||||||| |||
Sbjct: 3648878 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 3648937

                                                                           
Query: 373     ttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgctgatg 432
               || |||| ||||||||| || ||||| ||||||||||||  |||||| |||| |||||||
Sbjct: 3648938 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 3648997

                                                                           
Query: 433     ttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgtaaccg 492
               |||||||| ||||| || || || |||||||||||||| ||||||||||| ||  | || 
Sbjct: 3648998 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 3649057

                                   
Query: 493     cattccccgtcaagcgcaga 512
               ||||| || |||||||||||
Sbjct: 3649058 cattctccatcaagcgcaga 3649077



 Score =  125 bits (63), Expect = 2e-25
 Identities = 88/95 (92%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                           
Query: 600     ccttgttttcccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtag 659
               ||||||||||||||||||| |||||||||||||||||||||| |||||| || || ||||
Sbjct: 3650305 ccttgttttcccactcaaattctgcccacatgttccggaaagcaacatcggcacaagtag 3650364

                                                  
Query: 660     caggtggagatgtaatccatgatgtcaatgtgaat 694
               ||||| ||||| |||||||||||||||||||||||
Sbjct: 3650365 caggt-gagatataatccatgatgtcaatgtgaat 3650398



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                           
Query: 515     gtggtgttagacacttcatatttgttgacttgataacatgactcaaaaatttcttctcat 574
               ||||||||||||||||||||||||| || ||||| | ||||  |||||||| ||||||||
Sbjct: 3649842 gtggtgttagacacttcatatttgtcgatttgatgatatgatccaaaaattccttctcat 3649901

                                  
Query: 575     cttgaattacagtattcac 593
               | ||||| ||||| |||||
Sbjct: 3649902 cctgaatgacagtgttcac 3649920
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  167 bits (84), Expect = 6e-38
 Identities = 171/200 (85%)
 Strand = Plus / Plus

                                                                           
Query: 313     ctgcctcccttctgcttgagggtaatcttatctcccaagctgagcgcgattccttgtgtc 372
               |||||||||||||| |||||||| ||||| || || |||||||| ||||||||||| |||
Sbjct: 3657572 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 3657631

                                                                           
Query: 373     ttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctcaatgctgatg 432
               || |||| ||||||||| || ||||| ||||||||||||  |||||| |||| |||||||
Sbjct: 3657632 ttactccgtattctgatatagccactcagcttgccatcggcttgcttttcaacgctgatg 3657691

                                                                           
Query: 433     ttcaccaaagcatcttctccgaacacactcttggcataaagattagcagcaatgtaaccg 492
               |||||||| ||||| || || || |||||||||||||| ||||||||||| ||  | || 
Sbjct: 3657692 ttcaccaatgcatcctcaccaaaaacactcttggcatagagattagcagcgataaaccca 3657751

                                   
Query: 493     cattccccgtcaagcgcaga 512
               ||||| || |||||||||||
Sbjct: 3657752 cattctccatcaagcgcaga 3657771



 Score =  125 bits (63), Expect = 2e-25
 Identities = 88/95 (92%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                           
Query: 600     ccttgttttcccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtag 659
               ||||||||||||||||||| |||||||||||||||||||||| |||||| || || ||||
Sbjct: 3658999 ccttgttttcccactcaaattctgcccacatgttccggaaagcaacatcggcacaagtag 3659058

                                                  
Query: 660     caggtggagatgtaatccatgatgtcaatgtgaat 694
               ||||| ||||| |||||||||||||||||||||||
Sbjct: 3659059 caggt-gagatataatccatgatgtcaatgtgaat 3659092



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                           
Query: 515     gtggtgttagacacttcatatttgttgacttgataacatgactcaaaaatttcttctcat 574
               ||||||||||||||||||||||||| || ||||| | ||||  |||||||| ||||||||
Sbjct: 3658536 gtggtgttagacacttcatatttgtcgatttgatgatatgatccaaaaattccttctcat 3658595

                                  
Query: 575     cttgaattacagtattcac 593
               | ||||| ||||| |||||
Sbjct: 3658596 cctgaatgacagtgttcac 3658614
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>ref|NM_119298.2| Arabidopsis thaliana clathrin binding AT4G31490 mRNA, complete cds
          Length = 3306

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 77/92 (83%), Gaps = 1/92 (1%)
 Strand = Plus / Minus

                                                                        
Query: 600  ccttgttttcccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtag 659
            ||||||||||||| |||||||||||||||||  | | ||||| ||| |||| |||   ||
Sbjct: 2675 ccttgttttcccattcaaactctgcccacatagttctgaaagcaacctctgagcacacag 2616

                                            
Query: 660  caggtggagatgtaatccatgatgtcaatgtg 691
            |||| |||||| || |||||||| ||||||||
Sbjct: 2615 cagg-ggagatatagtccatgatatcaatgtg 2585



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 364  ccttgtgtcttgctccttattctgatgtaaccact 398
            ||||| |||||||||||||| || |||||||||||
Sbjct: 2910 ccttgcgtcttgctccttatccttatgtaaccact 2876
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>ref|XM_788019.1| PREDICTED: Strongylocentrotus purpuratus similar to Coatomer beta
           subunit (Beta-coat protein) (Beta-COP) (LOC588329), mRNA
          Length = 1149

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 600 ccttgttttcccactcaaactctgcccacatg 631
           |||||||||||||||||||||| |||||||||
Sbjct: 781 ccttgttttcccactcaaactcagcccacatg 750
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>emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BAC clone F3L17 (ESSA project)
          Length = 94319

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 77/92 (83%), Gaps = 1/92 (1%)
 Strand = Plus / Minus

                                                                         
Query: 600   ccttgttttcccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtag 659
             ||||||||||||| |||||||||||||||||  | | ||||| ||| |||| |||   ||
Sbjct: 50113 ccttgttttcccattcaaactctgcccacatagttctgaaagcaacctctgagcacacag 50054

                                             
Query: 660   caggtggagatgtaatccatgatgtcaatgtg 691
             |||| |||||| || |||||||| ||||||||
Sbjct: 50053 cagg-ggagatatagtccatgatatcaatgtg 50023



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                         
Query: 364   ccttgtgtcttgctccttattctgatgtaaccactaagcttgccatcgatttgcttctca 423
             ||||| |||||||||||||| || ||||||||||| |   | |||||  |||||||||||
Sbjct: 50517 ccttgcgtcttgctccttatccttatgtaaccactcaatgttccatccgtttgcttctca 50458

                                                            
Query: 424   atgctgatgttcaccaaagcatcttctccgaacacactcttggcata 470
             || || |  ||||| | |||||| || || |||||||| || |||||
Sbjct: 50457 atactcaaattcacaagagcatcctcaccaaacacactttttgcata 50411



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 364   ccttgtgtcttgctccttattctgatgtaaccact 398
             ||||| |||||||||||||| || |||||||||||
Sbjct: 45208 ccttgcgtcttgctccttatccttatgtaaccact 45174



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 600   ccttgttttcccactcaaactctgcccacat 630
             ||||||||||||| || ||||||||||||||
Sbjct: 44807 ccttgttttcccattcgaactctgcccacat 44777
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>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75
          Length = 196242

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 77/92 (83%), Gaps = 1/92 (1%)
 Strand = Plus / Minus

                                                                         
Query: 600   ccttgttttcccactcaaactctgcccacatgttccggaaagtaacatctgcgcatgtag 659
             ||||||||||||| |||||||||||||||||  | | ||||| ||| |||| |||   ||
Sbjct: 38178 ccttgttttcccattcaaactctgcccacatagttctgaaagcaacctctgagcacacag 38119

                                             
Query: 660   caggtggagatgtaatccatgatgtcaatgtg 691
             |||| |||||| || |||||||| ||||||||
Sbjct: 38118 cagg-ggagatatagtccatgatatcaatgtg 38088



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 364   ccttgtgtcttgctccttattctgatgtaaccact 398
             ||||| |||||||||||||| || |||||||||||
Sbjct: 38582 ccttgcgtcttgctccttatccttatgtaaccact 38548



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 364   ccttgtgtcttgctccttattctgatgtaaccact 398
             ||||| |||||||||||||| || |||||||||||
Sbjct: 33273 ccttgcgtcttgctccttatccttatgtaaccact 33239



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 600   ccttgttttcccactcaaactctgcccacat 630
             ||||||||||||| || ||||||||||||||
Sbjct: 32872 ccttgttttcccattcgaactctgcccacat 32842
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>emb|AJ720879.1| Gallus gallus mRNA for hypothetical protein, clone 28l17
          Length = 3348

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 602  ttgttttcccactcaaactctgcccacat 630
            ||||||||||||||||| |||||||||||
Sbjct: 2755 ttgttttcccactcaaattctgcccacat 2727
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>ref|NM_001006467.1| Gallus gallus coatomer protein complex, subunit beta (COPB), mRNA
          Length = 3348

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 602  ttgttttcccactcaaactctgcccacat 630
            ||||||||||||||||| |||||||||||
Sbjct: 2755 ttgttttcccactcaaattctgcccacat 2727
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>ref|XM_370363.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
            (MG06860.4) partial mRNA
          Length = 2877

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 600  ccttgttttcccactcaaactctgcccacatg 631
            ||||||| |||||||||||||||| |||||||
Sbjct: 2581 ccttgttctcccactcaaactctgtccacatg 2550
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>gb|AC026791.4|AC026791 Homo sapiens chromosome 5 clone CTD-2265D9, complete sequence
          Length = 154318

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 158   tcctcttcttttctcatcattttctttg 185
             |||| |||||||||||||||||||||||
Sbjct: 21122 tccttttcttttctcatcattttctttg 21095
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>dbj|AB080596.1| Botryococcus braunii bCOP mRNA for coatomer subunit beta, complete
            cds
          Length = 3313

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 600  ccttgttttcccactcaaactctgcccacatg 631
            ||||||| |||||||||||||| |||||||||
Sbjct: 2761 ccttgttctcccactcaaactcagcccacatg 2730
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>ref|NM_119297.2| Arabidopsis thaliana clathrin binding AT4G31480 mRNA, complete cds
          Length = 3296

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 364  ccttgtgtcttgctccttattctgatgtaaccact 398
            ||||| |||||||||||||| || |||||||||||
Sbjct: 2861 ccttgcgtcttgctccttatccttatgtaaccact 2827



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 600  ccttgttttcccactcaaactctgcccacat 630
            ||||||||||||| || ||||||||||||||
Sbjct: 2626 ccttgttttcccattcgaactctgcccacat 2596
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>gb|BC081657.1| Danio rerio coatomer protein complex, subunit beta 1, mRNA (cDNA
            clone MGC:92482 IMAGE:7045742), complete cds
          Length = 3302

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 600  ccttgttttcccactcaaactctgcccacat 630
            |||| ||||||||||||||||| ||||||||
Sbjct: 2681 ccttattttcccactcaaactcagcccacat 2651
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>gb|AC145952.3| Pan troglodytes BAC clone RP43-18D16 from 7, complete sequence
          Length = 160354

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 165   cttttctcatcattttctttgat 187
             |||||||||||||||||||||||
Sbjct: 64635 cttttctcatcattttctttgat 64613
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>gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, complete sequence
          Length = 217989

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 160    ctcttcttttctcatcattttct 182
              |||||||||||||||||||||||
Sbjct: 163429 ctcttcttttctcatcattttct 163451
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>gb|AC113010.10| Mus musculus chromosome 18, clone RP23-172F6, complete sequence
          Length = 246921

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 160   ctcttcttttctcatcattttct 182
             |||||||||||||||||||||||
Sbjct: 66466 ctcttcttttctcatcattttct 66488
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>ref|XM_793895.1| PREDICTED: Strongylocentrotus purpuratus similar to Coatomer beta
           subunit (Beta-coat protein) (Beta-COP) (LOC594455),
           partial mRNA
          Length = 404

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 668 gatgtaatccatgatgtcaatgtgaat 694
           ||||||||||||||| |||||||||||
Sbjct: 80  gatgtaatccatgatatcaatgtgaat 54
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>gb|BC100179.1| Xenopus laevis cDNA clone MGC:114704 IMAGE:6634061, complete cds
          Length = 3459

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 600  ccttgttttcccactcaaactctgcccacat 630
            |||| ||||||||||||||||| ||||||||
Sbjct: 2733 ccttattttcccactcaaactccgcccacat 2703
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>ref|XM_691860.1| PREDICTED: Danio rerio similar to Coatomer protein complex, subunit
            beta 1 (LOC568528), mRNA
          Length = 3555

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 600  ccttgttttcccactcaaactctgcccacat 630
            |||| ||||||||||||||||| ||||||||
Sbjct: 2827 ccttattttcccactcaaactcagcccacat 2797
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>dbj|AK221668.1| Arabidopsis thaliana mRNA for putative protein, complete cds,
           clone: RAFL09-97-P16
          Length = 1212

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 364 ccttgtgtcttgctccttattctgatgtaaccact 398
           ||||| |||||||||||||| || |||||||||||
Sbjct: 816 ccttgcgtcttgctccttatccttatgtaaccact 782



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 600 ccttgttttcccactcaaactctgcccacat 630
           ||||||||||||| || ||||||||||||||
Sbjct: 581 ccttgttttcccattcgaactctgcccacat 551
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>ref|NM_001002013.1| Danio rerio coatomer protein complex, subunit beta 1 (copb1), mRNA
          Length = 3239

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 600  ccttgttttcccactcaaactctgcccacat 630
            |||| ||||||||||||||||| ||||||||
Sbjct: 2663 ccttattttcccactcaaactcagcccacat 2633
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>emb|BX005056.7| Zebrafish DNA sequence from clone CH211-77A11 in linkage group 7,
             complete sequence
          Length = 173708

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 600   ccttgttttcccactcaaactctgcccacat 630
             |||| ||||||||||||||||| ||||||||
Sbjct: 38699 ccttattttcccactcaaactcagcccacat 38669
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>gb|AY294010.1| Danio rerio coatomer protein complex subunit beta 1 (copb1) mRNA,
            complete cds
          Length = 3239

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 600  ccttgttttcccactcaaactctgcccacat 630
            |||| ||||||||||||||||| ||||||||
Sbjct: 2663 ccttattttcccactcaaactcagcccacat 2633
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>emb|AL953895.8| Zebrafish DNA sequence from clone CH211-231M14 in linkage group 7,
             complete sequence
          Length = 167156

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 600   ccttgttttcccactcaaactctgcccacat 630
             |||| ||||||||||||||||| ||||||||
Sbjct: 26481 ccttattttcccactcaaactcagcccacat 26451
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>gb|AY244453.1| Halichondria panicea microsatellite Hapa28 sequence
          Length = 370

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 601 cttgttttcccactcaaactctgcccacat 630
           |||||| |||||||||||||| ||||||||
Sbjct: 128 cttgttctcccactcaaactccgcccacat 99
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>emb|AJ632317.1| Cotesia congregata virus complete genome, segment Circle14
          Length = 31972

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 559 aaaaatttcttctcatcttgaa 580
           ||||||||||||||||||||||
Sbjct: 53  aaaaatttcttctcatcttgaa 32
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>emb|AJ640104.1| Cotesia congregata virus proviral CcBV PTPU gene for protein
           tyrosine phosphatase
          Length = 831

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 559 aaaaatttcttctcatcttgaa 580
           ||||||||||||||||||||||
Sbjct: 188 aaaaatttcttctcatcttgaa 167
to top
>gb|AC121353.2| Rattus norvegicus chromosome 1 clone RP32-274I11 map q34, complete
             sequence
          Length = 142440

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 423   aatgctgatgttcaccaaagc 443
             |||||||||||||||||||||
Sbjct: 96357 aatgctgatgttcaccaaagc 96377
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>ref|XM_723907.1| Plasmodium yoelii yoelii str. 17XNL coatomer subunit beta (PY01272)
            partial mRNA
          Length = 3861

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 602  ttgttttcccactcaaactctgcccacat 630
            ||||||||||| |||||||||| ||||||
Sbjct: 3452 ttgttttcccattcaaactctgaccacat 3424
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>gb|AF212132.1| Bombyx mandarina mariner transposon Bmamar2 transposase
          pseudogene, partial sequence
          Length = 458

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 22 gtcggtaataaagcatcacaattga 46
          ||||||||||||| |||||||||||
Sbjct: 54 gtcggtaataaagaatcacaattga 30
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>emb|AL732560.11| Mouse DNA sequence from clone RP24-209P15 on chromosome 2, complete
             sequence
          Length = 104663

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 534   atttgttgacttgataacatg 554
             |||||||||||||||||||||
Sbjct: 74560 atttgttgacttgataacatg 74580
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>ref|NM_001016394.2| Xenopus tropicalis hypothetical protein LOC549148 (LOC549148), mRNA
          Length = 1594

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 165 cttttctcatcattttcttt 184
           ||||||||||||||||||||
Sbjct: 119 cttttctcatcattttcttt 100
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>gb|AY746406.1| Poncirus trifoliata resistance protein-like protein (RGA 10) gene,
           partial cds
          Length = 513

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 559 aaaaatttcttctcatcttg 578
           ||||||||||||||||||||
Sbjct: 212 aaaaatttcttctcatcttg 231
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>gb|AC131577.16| Mus musculus chromosome 1, clone RP23-23I4, complete sequence
          Length = 234224

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 547    ataacatgactcaaaaatttcttc 570
              ||||||||||||||| ||||||||
Sbjct: 143423 ataacatgactcaaatatttcttc 143446
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>gb|AC122221.4| Mus musculus BAC clone RP23-128B1 from chromosome 5, complete sequence
          Length = 216207

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 613   ctcaaactctgcccacatgt 632
             ||||||||||||||||||||
Sbjct: 76548 ctcaaactctgcccacatgt 76567
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>ref|XM_615637.2| PREDICTED: Bos taurus similar to coatomer protein complex, subunit
            beta, transcript variant 2 (LOC535533), mRNA
          Length = 3201

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 675  tccatgatgtcaatgtgaat 694
            ||||||||||||||||||||
Sbjct: 2525 tccatgatgtcaatgtgaat 2506
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>ref|XM_865359.1| PREDICTED: Bos taurus similar to coatomer protein complex, subunit
            beta, transcript variant 3 (LOC535533), mRNA
          Length = 3260

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 675  tccatgatgtcaatgtgaat 694
            ||||||||||||||||||||
Sbjct: 2540 tccatgatgtcaatgtgaat 2521
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>ref|XM_875628.1| PREDICTED: Bos taurus similar to coatomer protein complex, subunit
            beta, transcript variant 4 (LOC535533), mRNA
          Length = 3245

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 675  tccatgatgtcaatgtgaat 694
            ||||||||||||||||||||
Sbjct: 2525 tccatgatgtcaatgtgaat 2506
to top
>ref|XM_323756.1| Neurospora crassa OR74A hypothetical protein (NCU04404.1) partial
            mRNA
          Length = 2874

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 600  ccttgttttcccactcaaactctgcccacatg 631
            ||||||| |||||||||||||| | |||||||
Sbjct: 2578 ccttgttctcccactcaaactcggtccacatg 2547
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>ref|XM_952388.1| Neurospora crassa OR74A hypothetical protein (NCU04404.1) partial
            mRNA
          Length = 2874

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 600  ccttgttttcccactcaaactctgcccacatg 631
            ||||||| |||||||||||||| | |||||||
Sbjct: 2578 ccttgttctcccactcaaactcggtccacatg 2547
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>gb|AC147885.2| Xenopus tropicalis clone CH216-12C9, complete sequence
          Length = 222162

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    cttttctcatcattttcttt 184
              ||||||||||||||||||||
Sbjct: 115684 cttttctcatcattttcttt 115703
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>gb|AF025465.1| Caenorhabditis elegans cosmid K02E7, complete sequence
          Length = 36535

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 caaaaatttcttctcatctt 577
           ||||||||||||||||||||
Sbjct: 540 caaaaatttcttctcatctt 559
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>gb|AC091465.7| Mus musculus chromosome 1, clone RP23-221K1, complete sequence
          Length = 199109

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 547   ataacatgactcaaaaatttcttc 570
             ||||||||||||||| ||||||||
Sbjct: 18444 ataacatgactcaaatatttcttc 18467
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>ref|XM_754415.1| Ustilago maydis 521 hypothetical protein (UM03361.1) partial mRNA
          Length = 2949

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 600  ccttgttttcccactcaaactctgcccacatg 631
            |||||||||||||||| ||||| | |||||||
Sbjct: 2650 ccttgttttcccactcgaactcggtccacatg 2619
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 392     aaccactaagcttgccatcg 411
               ||||||||||||||||||||
Sbjct: 3889983 aaccactaagcttgccatcg 3890002
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>ref|XM_382956.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein
            (FG02780.1) partial mRNA
          Length = 2874

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 600  ccttgttttcccactcaaactctgcccacatg 631
            ||||||| |||||||||||||| | |||||||
Sbjct: 2578 ccttgttctcccactcaaactcagtccacatg 2547
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>ref|XM_854550.1| PREDICTED: Canis familiaris similar to senataxin, transcript variant
            2 (LOC480691), mRNA
          Length = 8571

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 629  atgttccggaaagtaacatc 648
            ||||||||||||||||||||
Sbjct: 7073 atgttccggaaagtaacatc 7054
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>ref|XM_537811.2| PREDICTED: Canis familiaris similar to senataxin, transcript variant
            1 (LOC480691), mRNA
          Length = 8670

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 629  atgttccggaaagtaacatc 648
            ||||||||||||||||||||
Sbjct: 7073 atgttccggaaagtaacatc 7054
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>gb|AC146207.3| Pan troglodytes BAC clone RP43-25M19 from 7, complete sequence
          Length = 179594

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 530    tcatatttgttgacttgata 549
              ||||||||||||||||||||
Sbjct: 117651 tcatatttgttgacttgata 117670
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>gb|AC146051.2| Pan troglodytes BAC clone RP43-73B15 from 7, complete sequence
          Length = 157886

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 530   tcatatttgttgacttgata 549
             ||||||||||||||||||||
Sbjct: 28843 tcatatttgttgacttgata 28862
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>ref|XM_721098.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05695)
           partial mRNA
          Length = 2505

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 369 tgtcttgctccttattctga 388
           ||||||||||||||||||||
Sbjct: 649 tgtcttgctccttattctga 630
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>gb|AC073112.6| Homo sapiens BAC clone RP11-555P19 from 7, complete sequence
          Length = 102932

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 530   tcatatttgttgacttgata 549
             ||||||||||||||||||||
Sbjct: 66806 tcatatttgttgacttgata 66787
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>emb|BX908809.1| Neurospora crassa DNA linkage group IV Cosmid contig 29E8
          Length = 197698

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 600   ccttgttttcccactcaaactctgcccacatg 631
             ||||||| |||||||||||||| | |||||||
Sbjct: 20902 ccttgttctcccactcaaactcggtccacatg 20871
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>gb|AC098848.7| Homo sapiens chromosome 18, clone RP11-839G9, complete sequence
          Length = 189315

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 527    acttcatatttgttgacttgataa 550
              |||||||||||||||| |||||||
Sbjct: 137821 acttcatatttgttgaattgataa 137844
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>gb|AC089996.12| Homo sapiens 12 BAC RP11-76M15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 107793

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   agggtaatcttatctcccaa 350
             ||||||||||||||||||||
Sbjct: 30187 agggtaatcttatctcccaa 30168
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>gb|AC105204.5| Homo sapiens chromosome 15, clone RP11-1087J2, complete sequence
          Length = 210658

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   ttcttttctcatcattttct 182
             ||||||||||||||||||||
Sbjct: 65993 ttcttttctcatcattttct 66012
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>gb|AC112724.3| Homo sapiens BAC clone RP11-811L19 from 4, complete sequence
          Length = 42210

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   tcttcttttctcatcatttt 180
             ||||||||||||||||||||
Sbjct: 23110 tcttcttttctcatcatttt 23091
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>gb|AC090259.5| Homo sapiens chromosome 15, clone RP11-424E9, complete sequence
          Length = 143479

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     aaagcatcacaattgatgta 50
              ||||||||||||||||||||
Sbjct: 126939 aaagcatcacaattgatgta 126958
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>gb|AC100825.2| Homo sapiens chromosome 15, clone RP11-1152M12, complete sequence
          Length = 127680

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aaagcatcacaattgatgta 50
             ||||||||||||||||||||
Sbjct: 45044 aaagcatcacaattgatgta 45025
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>gb|AC090643.22| Homo sapiens 12q BAC RP11-489P6 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 52154

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 510   agactgtggtgttagacact 529
             ||||||||||||||||||||
Sbjct: 42594 agactgtggtgttagacact 42575
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>gb|AC079208.4| Homo sapiens chromosome 15, clone RP11-1149K15, complete sequence
          Length = 168252

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   ttcttttctcatcattttct 182
             ||||||||||||||||||||
Sbjct: 34307 ttcttttctcatcattttct 34288
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>ref|XM_694569.1| PREDICTED: Danio rerio similar to egf-like module-containing
           mucin-like receptor 3 isoform a (LOC571015), mRNA
          Length = 2205

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 attaactgcctcccttctgc 327
           ||||||||||||||||||||
Sbjct: 183 attaactgcctcccttctgc 164
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>gb|AC068207.6| Homo sapiens chromosome 8, clone RP11-26K8, complete sequence
          Length = 168843

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   cccttctgcttgagggtaat 338
             ||||||||||||||||||||
Sbjct: 29210 cccttctgcttgagggtaat 29229
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>gb|AC020783.8| Homo sapiens chromosome 8, clone RP11-16M2, complete sequence
          Length = 153740

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    aatgctgatgttcaccaaag 442
              ||||||||||||||||||||
Sbjct: 144127 aatgctgatgttcaccaaag 144146
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>gb|AC013551.10| Homo sapiens chromosome 15, clone RP11-133P13, complete sequence
          Length = 153823

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   ttcttttctcatcattttct 182
             ||||||||||||||||||||
Sbjct: 30254 ttcttttctcatcattttct 30273
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>dbj|AB168330.1| Macaca fascicularis testis cDNA clone: QtsA-11283, similar to human
            coatomer protein complex, subunit beta (COPB), mRNA,
            RefSeq: NM_016451.3
          Length = 2224

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 675  tccatgatgtcaatgtgaat 694
            ||||||||||||||||||||
Sbjct: 1478 tccatgatgtcaatgtgaat 1459
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>gb|AC016370.17|AC016370 Homo sapiens chromosome 15 clone RP11-424E9, complete sequence
          Length = 162773

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     aaagcatcacaattgatgta 50
              ||||||||||||||||||||
Sbjct: 146233 aaagcatcacaattgatgta 146252
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>gb|U80843.2| Caenorhabditis elegans cosmid C32B5, complete sequence
          Length = 42645

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 558   caaaaatttcttctcatctt 577
             ||||||||||||||||||||
Sbjct: 38673 caaaaatttcttctcatctt 38654
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>gb|AC150280.2| Pan troglodytes BAC clone CH251-20M5 from chromosome 7, complete
             sequence
          Length = 191966

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   ttttctcatcattttctttg 185
             ||||||||||||||||||||
Sbjct: 80407 ttttctcatcattttctttg 80388
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>gb|AC006030.2| Homo sapiens BAC clone RP11-1P9 from 2, complete sequence
          Length = 89352

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   ctcccttctgcttgagggta 336
             ||||||||||||||||||||
Sbjct: 72452 ctcccttctgcttgagggta 72433
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>gb|AC119189.8| Mus musculus chromosome 1, clone RP24-178E16, complete sequence
          Length = 182530

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     agacctatcgtgaaaaggaa 113
              ||||||||||||||||||||
Sbjct: 123743 agacctatcgtgaaaaggaa 123724
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>gb|AC147873.3| Monodelphis domestica clone VMRC6-582D4, complete sequence
          Length = 165359

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   cttcttttctcatcattttctttg 185
             ||||| ||||||||||||||||||
Sbjct: 54653 cttctattctcatcattttctttg 54676
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>emb|CR761165.2| Xenopus tropicalis finished cDNA, clone TEgg054k06
          Length = 1594

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 165 cttttctcatcattttcttt 184
           ||||||||||||||||||||
Sbjct: 119 cttttctcatcattttcttt 100
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>dbj|AP006305.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-53M8, complete sequence
          Length = 185588

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    cccttctgcttgagggtaat 338
              ||||||||||||||||||||
Sbjct: 134566 cccttctgcttgagggtaat 134585
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>gb|AC115876.18| Mus musculus chromosome 1, clone RP24-356G6, complete sequence
          Length = 163698

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  ttctcatcattttctttgat 187
            ||||||||||||||||||||
Sbjct: 6082 ttctcatcattttctttgat 6101
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>gb|AC125525.3| Mus musculus BAC clone RP24-395H10 from 1, complete sequence
          Length = 195904

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   ttctcatcattttctttgat 187
             ||||||||||||||||||||
Sbjct: 12907 ttctcatcattttctttgat 12888
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>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    cttcttttctcatcattttctttg 185
              ||||| ||||||||||||||||||
Sbjct: 883826 cttctattctcatcattttctttg 883849
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>emb|AL670035.15| Mouse DNA sequence from clone RP23-295C20 on chromosome 4, complete
             sequence
          Length = 201142

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 161   tcttcttttctcatcattttcttt 184
             ||||||||||| ||||||||||||
Sbjct: 47129 tcttcttttcttatcattttcttt 47106
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>dbj|AP000072.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene
           region, section 8/19, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 cccttctgcttgagggtaat 338
           ||||||||||||||||||||
Sbjct: 911 cccttctgcttgagggtaat 892
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>dbj|AP001577.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB611H5
          Length = 144828

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ttcacccatttatcaagaaa 94
             ||||||||||||||||||||
Sbjct: 43968 ttcacccatttatcaagaaa 43949


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,485,631
Number of Sequences: 3902068
Number of extensions: 7485631
Number of successful extensions: 189278
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 188839
Number of HSP's gapped (non-prelim): 410
length of query: 694
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 671
effective length of database: 17,143,297,704
effective search space: 11503152759384
effective search space used: 11503152759384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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