ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags20g13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061F14, full insert sequence Length = 1367 Score = 640 bits (323), Expect = e-180 Identities = 426/459 (92%), Gaps = 1/459 (0%) Strand = Plus / Minus Query: 249 aagaaacaatggtcact-agttgacgacgtccaggaccagcttgcgggacttgaggacag 307 |||||||| ||||| || ||||||| || || |||||||||||||| ||||| ||||| | Sbjct: 1135 aagaaacagtggtccctcagttgacaacatcaaggaccagcttgcgtgacttcaggacgg 1076 Query: 308 accacctcatgcgacggtagtatgcggcttggagaagagcaagtgacagtaggaagatcc 367 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1075 accacctcatgcgacggtagtatgcggcttggagaagtgcaagtgacagtaggaagatcc 1016 Query: 368 atttgacacccatcagtttcctctcttccatttcaggctcagctgcccacgacaagaacg 427 |||| || ||||||||||||||||||||||| ||||| ||||||||||| |||||||||| Sbjct: 1015 atttcactcccatcagtttcctctcttccatctcaggttcagctgcccatgacaagaacg 956 Query: 428 acacgacatccttgcccatctgggcttcagttgcaggagtaccatcttcatactcaatag 487 | ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || Sbjct: 955 aaacgacatccttgcccatctgggcttcagtggcaggagtaccatcttcatattcaacag 896 Query: 488 ctccatccataagcatcttaggcatggctatggcaccaccagggaagtagggattgtaat 547 ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 895 ctccatctataagcatcttgggcatagctatggcaccaccagggaagtagggattgtaat 836 Query: 548 gcagaccctcacgaatctgaacaccagcaggtgggtcatggtaaccagtaagaagagcaa 607 ||| ||||||||| ||||||||||| |||||||| ||| ||||||||||||||||||||| Sbjct: 835 gcaaaccctcacggatctgaacaccggcaggtggatcacggtaaccagtaagaagagcaa 776 Query: 608 acacgtagttctggccatcgtgccttgccttcgtgataaggctgagatctgggggatatg 667 |||| ||||||||||||| ||||||||||||||||||||| ||||||||||| || |||| Sbjct: 775 acacatagttctggccattgtgccttgccttcgtgataagactgagatctggtgggtatg 716 Query: 668 ccccaccatttgcaaatcgggctgcttgctcatttggat 706 |||||||||||||||| |||||||||||||||||||||| Sbjct: 715 ccccaccatttgcaaaacgggctgcttgctcatttggat 677 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 109 aaatgcttttgcagcagaggaagaaaaca 137 ||||||||||||||||||||||||||||| Sbjct: 1262 aaatgcttttgcagcagaggaagaaaaca 1234
>gb|AY090551.1| Deschampsia antarctica clone Dacor 1.1 cytochrome c1 precursor mRNA, 3' UTR and partial cds Length = 418 Score = 515 bits (260), Expect = e-143 Identities = 369/404 (91%), Gaps = 1/404 (0%) Strand = Plus / Minus Query: 88 aaataactgctcccttaagagaaatgcttttgcagcagaggaagaaaacaaaagagattg 147 |||||||||||||||| ||||||||||||||||||||| || ||||||| |||| ||| Sbjct: 403 aaataactgctcccttg-gagaaatgcttttgcagcagaagaggaaaacagaagaaattc 345 Query: 148 tacccaaggtatgatgggagacaaccagagtagcaaaatatacaacggaaagtccttatt 207 || || || |||||||||||||||| ||| ||||||| |||||| ||||||| ||||| Sbjct: 344 taggcaggggatgatgggagacaaccccagtggcaaaatgtacaacagaaagtcattatt 285 Query: 208 tcgatcgcttctgcttaaagactcgatgttgcaatagaaagaagaaacaatggtcactag 267 ||||| |||||||||||||||||| | |||| | || ||||||||||||||||||| || Sbjct: 284 tcgatagcttctgcttaaagactcaacgttgtagtaaaaagaagaaacaatggtcatcag 225 Query: 268 ttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggtag 327 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 224 ttgacgacatccaggaccagcttgcgggacttgaggaccgaccacctcatgcgacggtag 165 Query: 328 tatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagtttc 387 ||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tatgcagcttggataagtgcaagtgacagtaggaagatccatttgacacccatcagtttc 105 Query: 388 ctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgcccatc 447 ||||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||| Sbjct: 104 ctctcttccatttcaggctcagccgcccatgacaagaatgacacaacatccttgcccatc 45 Query: 448 tgggcttcagttgcaggagtaccatcttcatactcaatagctcc 491 ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 44 tgggcttcagttgcaggagtaccatcttcatactcaacagctcc 1
>gb|BT016510.1| Zea mays clone Contig343 mRNA sequence Length = 1417 Score = 488 bits (246), Expect = e-134 Identities = 390/438 (89%) Strand = Plus / Minus Query: 266 agttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggt 325 |||||||||| |||||||||||||| |||||||| ||||| |||||||||||||| |||| Sbjct: 1034 agttgacgacatccaggaccagctttcgggacttcaggactgaccacctcatgcggcggt 975 Query: 326 agtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagtt 385 |||| || ||||||||||| || ||||| ||||| ||||||||||| || |||||||| | Sbjct: 974 agtaggcagcttggagaagcgctagtgatagtagaaagatccatttcactcccatcagct 915 Query: 386 tcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccca 445 | ||||||||||| |||||||||||||||||||| | ||| || ||||||||||| |||| Sbjct: 914 ttctctcttccatctcaggctcagctgcccacgaaaggaatgatacgacatccttaccca 855 Query: 446 tctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatct 505 ||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||||||| Sbjct: 854 tctgggcttcagttgcaggtgtaccatcctcatactcaacagctccatcattaagcatct 795 Query: 506 taggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatct 565 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 794 tcggcatggctatggcaccaccagggaagtagggattgtagtgcagaccctcacgaatct 735 Query: 566 gaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggccat 625 |||||||||||||||| ||||| || |||||||||||||| || || |||||||| |||| Sbjct: 734 gaacaccagcaggtggatcatgatatccagtaagaagagcgaaaacatagttctgaccat 675 Query: 626 cgtgccttgccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaatc 685 |||||||||||| ||||| || || || || || || ||||| |||||||| ||||| | Sbjct: 674 tgtgccttgcctttgtgatgagactaaggtccggagggtatgcaccaccattagcaaacc 615 Query: 686 gggctgcttgctcatttg 703 ||||||||||||| |||| Sbjct: 614 gggctgcttgctcgtttg 597
>gb|AY103572.1| Zea mays PCO092029 mRNA sequence Length = 1394 Score = 464 bits (234), Expect = e-127 Identities = 387/438 (88%) Strand = Plus / Minus Query: 266 agttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggt 325 ||||||| || |||||||||||||| |||||||| | ||| |||||||||||||| |||| Sbjct: 1078 agttgacaacatccaggaccagcttacgggacttcaagactgaccacctcatgcggcggt 1019 Query: 326 agtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagtt 385 ||||||| ||||| ||||| || ||||| ||||| ||||||||||| || |||||||| | Sbjct: 1018 agtatgcagcttgaagaagcgctagtgatagtagaaagatccatttcactcccatcagct 959 Query: 386 tcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccca 445 | ||||||||||| ||||||||||||||||| || | ||| || || |||||||| |||| Sbjct: 958 ttctctcttccatctcaggctcagctgcccatgaaaggaatgatacaacatccttaccca 899 Query: 446 tctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatct 505 |||||||||||||||||||||||||||| |||||||||| ||||||||| | ||||||| Sbjct: 898 tctgggcttcagttgcaggagtaccatcctcatactcaacagctccatcattgagcatct 839 Query: 506 taggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatct 565 | |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 838 tgggcatggctatggcaccaccagggaagtaggggttgtagtgcagaccctcacgaatct 779 Query: 566 gaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggccat 625 |||||||||||||||| ||| |||| |||||||||||||| || || |||||||| |||| Sbjct: 778 gaacaccagcaggtggatcacggtatccagtaagaagagcgaaaacatagttctgaccat 719 Query: 626 cgtgccttgccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaatc 685 |||||||||||| |||||||| || || || || || || || |||||||| ||||||| Sbjct: 718 tgtgccttgcctttgtgataagactaaggtccggcgggtaggcgccaccattagcaaatc 659 Query: 686 gggctgcttgctcatttg 703 |||||||||||||||||| Sbjct: 658 gggctgcttgctcatttg 641
>ref|NM_190059.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 Score = 396 bits (200), Expect = e-107 Identities = 368/424 (86%) Strand = Plus / Minus Query: 280 aggaccagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttgg 339 |||||||||||||| |||||| ||| |||||| ||||||| ||||| ||||| ||||| Sbjct: 899 aggaccagcttgcgcgacttgtagacggaccacttcatgcgccggtaatatgcagcttgc 840 Query: 340 agaagagcaagtgacagtaggaagatccatttgacacccatcagtttcctctcttccatt 399 ||||| || || || ||||| || |||||||| || ||||||||||| ||||||||||| Sbjct: 839 agaagtgcgagggagagtagaaaaatccatttcactcccatcagttttctctcttccatc 780 Query: 400 tcaggctcagctgcccacgacaagaacgacacgacatccttgcccatctgggcttcagtt 459 |||||||| || ||||| ||||||||||| || ||||| || |||||||||||||| || Sbjct: 779 tcaggctccgccgcccatgacaagaacgagacaacatcttttcccatctgggcttctgta 720 Query: 460 gcaggagtaccatcttcatactcaatagctccatccataagcatcttaggcatggctatg 519 || ||||| |||||||||||||| | |||||||| ||||||||||| |||||||||||| Sbjct: 719 gctggagtgccatcttcatactcgactgctccatcaataagcatcttgggcatggctatg 660 Query: 520 gcaccaccagggaagtagggattgtaatgcagaccctcacgaatctgaacaccagcaggt 579 ||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| Sbjct: 659 gcaccaccagggaagtagggattgtaatgcaagccttcacgaatcgaaacaccagcaggt 600 Query: 580 gggtcatggtaaccagtaagaagagcaaacacgtagttctggccatcgtgccttgccttc 639 || ||| | |||||||| ||||||||||| || ||||||||||||| |||||| ||||| Sbjct: 599 ggatcacgataaccagtgagaagagcaaaaacatagttctggccattgtgcctggccttt 540 Query: 640 gtgataaggctgagatctgggggatatgccccaccatttgcaaatcgggctgcttgctca 699 ||||| || |||||||| ||||| |||||||| ||||||| |||||| |||||||||||| Sbjct: 539 gtgattagactgagatccggggggtatgccccgccatttgaaaatcgagctgcttgctca 480 Query: 700 tttg 703 |||| Sbjct: 479 tttg 476
>dbj|AK069403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013M20, full insert sequence Length = 1379 Score = 396 bits (200), Expect = e-107 Identities = 368/424 (86%) Strand = Plus / Minus Query: 280 aggaccagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttgg 339 |||||||||||||| |||||| ||| |||||| ||||||| ||||| ||||| ||||| Sbjct: 1047 aggaccagcttgcgcgacttgtagacggaccacttcatgcgccggtaatatgcagcttgc 988 Query: 340 agaagagcaagtgacagtaggaagatccatttgacacccatcagtttcctctcttccatt 399 ||||| || || || ||||| || |||||||| || ||||||||||| ||||||||||| Sbjct: 987 agaagtgcgagggagagtagaaaaatccatttcactcccatcagttttctctcttccatc 928 Query: 400 tcaggctcagctgcccacgacaagaacgacacgacatccttgcccatctgggcttcagtt 459 |||||||| || ||||| ||||||||||| || ||||| || |||||||||||||| || Sbjct: 927 tcaggctccgccgcccatgacaagaacgagacaacatcttttcccatctgggcttctgta 868 Query: 460 gcaggagtaccatcttcatactcaatagctccatccataagcatcttaggcatggctatg 519 || ||||| |||||||||||||| | |||||||| ||||||||||| |||||||||||| Sbjct: 867 gctggagtgccatcttcatactcgactgctccatcaataagcatcttgggcatggctatg 808 Query: 520 gcaccaccagggaagtagggattgtaatgcagaccctcacgaatctgaacaccagcaggt 579 ||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| Sbjct: 807 gcaccaccagggaagtagggattgtaatgcaagccttcacgaatcgaaacaccagcaggt 748 Query: 580 gggtcatggtaaccagtaagaagagcaaacacgtagttctggccatcgtgccttgccttc 639 || ||| | |||||||| ||||||||||| || ||||||||||||| |||||| ||||| Sbjct: 747 ggatcacgataaccagtgagaagagcaaaaacatagttctggccattgtgcctggccttt 688 Query: 640 gtgataaggctgagatctgggggatatgccccaccatttgcaaatcgggctgcttgctca 699 ||||| || |||||||| ||||| |||||||| ||||||| |||||| |||||||||||| Sbjct: 687 gtgattagactgagatccggggggtatgccccgccatttgaaaatcgagctgcttgctca 628 Query: 700 tttg 703 |||| Sbjct: 627 tttg 624
>gb|AY805120.1| Ornithogalum virens clone 3OvF39 putative cytochrome c1 precursor protein mRNA, partial cds Length = 923 Score = 287 bits (145), Expect = 2e-74 Identities = 337/401 (84%) Strand = Plus / Minus Query: 283 accagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttggaga 342 ||||||||||| ||||||| ||||||||||| || |||||||| ||| | ||||| || Sbjct: 539 accagcttgcgtgacttgaagacagaccaccgcaaacgacggtaatatccagcttgaagg 480 Query: 343 agagcaagtgacagtaggaagatccatttgacacccatcagtttcctctcttccatttca 402 || || ||||| || | ||| |||||||||| ||||||||||| | ||||||||| || Sbjct: 479 agcgccagtgatagcacgaaaatccatttgaatcccatcagtttgcgctcttccatctcg 420 Query: 403 ggctcagctgcccacgacaagaacgacacgacatccttgcccatctgggcttcagttgca 462 ||||| ||||||||||| || || || ||||| ||||| |||||||| |||||||||||| Sbjct: 419 ggctccgctgcccacgataaaaatgaaacgacgtccttccccatctgagcttcagttgca 360 Query: 463 ggagtaccatcttcatactcaatagctccatccataagcatcttaggcatggctatggca 522 || ||||||||||||||||| | ||||||||| |||||||| || ||||| ||||| ||| Sbjct: 359 ggggtaccatcttcatactctaaagctccatctataagcattttgggcatagctatagca 300 Query: 523 ccaccagggaagtagggattgtaatgcagaccctcacgaatctgaacaccagcaggtggg 582 |||||||| ||||| |||||||| ||||| || || |||||| |||||||||||| || Sbjct: 299 ccaccaggaaagtatggattgtagtgcagtccttctcgaatcgaaacaccagcaggagga 240 Query: 583 tcatggtaaccagtaagaagagcaaacacgtagttctggccatcgtgccttgccttcgtg 642 ||| |||| ||||||||||||||||| || |||||||| |||| ||| | ||||| || Sbjct: 239 tcacggtagccagtaagaagagcaaatacatagttctgtccattgtgtcgagccttagtt 180 Query: 643 ataaggctgagatctgggggatatgccccaccatttgcaaa 683 || ||||| || ||||| |||||||| |||||||||||||| Sbjct: 179 attaggcttaggtctggaggatatgctccaccatttgcaaa 139
>gb|BT012926.1| Lycopersicon esculentum clone 114089R, mRNA sequence Length = 1382 Score = 266 bits (134), Expect = 9e-68 Identities = 347/418 (83%) Strand = Plus / Minus Query: 266 agttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggt 325 ||||||| || || ||||||| ||||| || || ||||||||||| |||| |||||||| Sbjct: 1130 agttgacaacatcgaggaccaatttgcgagatttcaggacagaccatctcaggcgacggt 1071 Query: 326 agtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagtt 385 |||| || ||||||||||| |||||||| | | ||| |||||||||| ||||||||| | Sbjct: 1070 agtaagctgcttggagaagtgcaagtgataagacgaatatccatttgaaacccatcagct 1011 Query: 386 tcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccca 445 | |||||||||||||| |||||||| ||||| |||||||||||||| ||||| || |||| Sbjct: 1010 ttctctcttccatttctggctcagcagcccatgacaagaacgacacaacatcttttccca 951 Query: 446 tctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatct 505 | || || ||||||||||| |||||||||||||||||| ||| ||||| ||||||| | Sbjct: 950 tttgtgcctcagttgcaggtataccatcttcatactcaacagcaccatcattaagcattt 891 Query: 506 taggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatct 565 ||||||| ||||| || |||||||||||||| || || || || ||||| || |||||| Sbjct: 890 taggcattgctatagctccaccagggaagtaagggttatagtgaagaccttcccgaatcg 831 Query: 566 gaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggccat 625 |||| |||||| ||||| |||| ||||| ||||||||||| || ||||| || || | Sbjct: 830 agacacaagcaggagggtcccggtagccagttagaagagcaaaaacatagttttgaccgt 771 Query: 626 cgtgccttgccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaa 683 |||| ||||| |||||||| || ||||| || ||||| ||||||||||||||||| Sbjct: 770 tatgccgggccttagtgataagacttagatcaggaggataagccccaccatttgcaaa 713
>gb|BT014041.1| Lycopersicon esculentum clone 133106F, mRNA sequence Length = 1437 Score = 210 bits (106), Expect = 5e-51 Identities = 280/338 (82%) Strand = Plus / Minus Query: 280 aggaccagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttgg 339 ||||||||||| || |||||||| ||||||||||||| || | |||||| || ||||| Sbjct: 1066 aggaccagcttacgtgacttgagaacagaccacctcaaacgcctgtagtaagcagcttga 1007 Query: 340 agaagagcaagtgacagtaggaagatccatttgacacccatcagtttcctctcttccatt 399 || || ||||| ||||||| || ||||| |||| ||||||||||| |||||||||||| Sbjct: 1006 agcagtgcaagggacagtacaaatatccacttgaagcccatcagttttctctcttccatt 947 Query: 400 tcaggctcagctgcccacgacaagaacgacacgacatccttgcccatctgggcttcagtt 459 || || ||||| ||||| | || || ||||| ||||| || |||||||| ||||| ||| Sbjct: 946 tctggttcagcagcccaagttaaaaatgacaccacatctttccccatctgagcttctgtt 887 Query: 460 gcaggagtaccatcttcatactcaatagctccatccataagcatcttaggcatggctatg 519 ||||| ||||||||||||||||| ||| ||||| ||||||| || ||||| || || Sbjct: 886 gcagggacaccatcttcatactcaacagcaccatcattaagcatttttggcattgcaata 827 Query: 520 gcaccaccagggaagtagggattgtaatgcagaccctcacgaatctgaacaccagcaggt 579 || |||||||||||||| |||||||| ||||| || ||||||||| |||||||||||| Sbjct: 826 gctccaccagggaagtaaggattgtagtgcagtccttcacgaatcgaaacaccagcagga 767 Query: 580 gggtcatggtaaccagtaagaagagcaaacacgtagtt 617 || ||| | || |||||||||||||||||||| ||||| Sbjct: 766 ggatcacgatagccagtaagaagagcaaacacatagtt 729
>emb|X79597.1|STCYC1 S.tuberosum (Desiree) cyc1 II mRNA. for cytochrome c1 Length = 1014 Score = 202 bits (102), Expect = 1e-48 Identities = 279/338 (82%) Strand = Plus / Minus Query: 280 aggaccagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttgg 339 ||||||||||| || |||||||| ||||||||||||| || | |||||| || ||||| Sbjct: 769 aggaccagcttccgtgacttgagaacagaccacctcaaacgcctgtagtaagcagcttga 710 Query: 340 agaagagcaagtgacagtaggaagatccatttgacacccatcagtttcctctcttccatt 399 || || ||||| ||||||| || ||||| |||| ||||||||||| ||||||||||| Sbjct: 709 agtagtgcaagggacagtacaaatatccacttgaagcccatcagttttctctcttccatc 650 Query: 400 tcaggctcagctgcccacgacaagaacgacacgacatccttgcccatctgggcttcagtt 459 || || ||||| ||||| | || || ||||| ||||| || |||||||| ||||| ||| Sbjct: 649 tctggttcagcagcccaagttaaaaatgacaccacatctttccccatctgagcttctgtt 590 Query: 460 gcaggagtaccatcttcatactcaatagctccatccataagcatcttaggcatggctatg 519 ||||| ||||||||||||||||| ||| ||||| ||||||| || ||||| || || Sbjct: 589 gcagggacaccatcttcatactcaacagcaccatcattaagcatttttggcattgcaata 530 Query: 520 gcaccaccagggaagtagggattgtaatgcagaccctcacgaatctgaacaccagcaggt 579 || |||||||||||||| |||||||| ||||| || ||||||||| |||||||||||| Sbjct: 529 gctccaccagggaagtaaggattgtagtgcagtccttcacgaatcgaaacaccagcagga 470 Query: 580 gggtcatggtaaccagtaagaagagcaaacacgtagtt 617 || ||| | || |||||||||||||||||||| ||||| Sbjct: 469 ggatcacgatagccagtaagaagagcaaacacatagtt 432
>gb|DQ294620.1| Arachis hypogaea cytochrome c1-like mRNA, partial sequence Length = 615 Score = 174 bits (88), Expect = 3e-40 Identities = 253/308 (82%) Strand = Plus / Minus Query: 376 cccatcagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgaca 435 ||||||||||| ||||||||||| || || || || ||||| || ||||| ||||| ||| Sbjct: 506 cccatcagttttctctcttccatctccggttcggcagcccaagataagaatgacacaaca 447 Query: 436 tccttgcccatctgggcttcagttgcaggagtaccatcttcatactcaatagctccatcc 495 || || |||||||| | |||||| || ||||||||||| ||||| |||| ||| ||||| Sbjct: 446 tctttccccatctgagattcagtggcgggagtaccatcctcatattcaacagcaccatcg 387 Query: 496 ataagcatcttaggcatggctatggcaccaccagggaagtagggattgtaatgcagaccc 555 ||||||| ||||||||||| ||||||||||||||||| || || || || ||||||||| Sbjct: 386 ttaagcattttaggcatggcaatggcaccaccagggaaataagggttatagtgcagaccc 327 Query: 556 tcacgaatctgaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtag 615 || | |||| |||||||||||| || ||| | |||||||| ||||| |||||||| || Sbjct: 326 tctctaatcgaaacaccagcagggggatcacgataaccagttagaagggcaaacacataa 267 Query: 616 ttctggccatcgtgccttgccttcgtgataaggctgagatctgggggatatgccccacca 675 ||||| |||| ||| | ||||| || ||||| || |||||||| ||||| || || ||| Sbjct: 266 ttctgaccattgtgacgggccttggtaataagacttagatctggaggataggctcctcca 207 Query: 676 tttgcaaa 683 || ||||| Sbjct: 206 ttagcaaa 199 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 268 ttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggtag 327 |||||||| || || ||||||||||| ||||| || ||||||||||| | |||||||||| Sbjct: 614 ttgacgacatcaagaaccagcttgcgagactttagaacagaccacctaaggcgacggtag 555 Query: 328 ta 329 || Sbjct: 554 ta 553
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 172 bits (87), Expect = 1e-39 Identities = 111/119 (93%) Strand = Plus / Plus Query: 447 ctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatctt 506 |||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||||| Sbjct: 93672 ctgggcttcagtggcaggagtaccatcttcatattcaacagctccatctataagcatctt 93731 Query: 507 aggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatct 565 ||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 93732 gggcatagctatggcaccaccagggaagtagggattgtaatgcaaaccctcacggatct 93790 Score = 163 bits (82), Expect = 1e-36 Identities = 122/134 (91%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 249 aagaaacaatggtcact-agttgacgacgtccaggaccagcttgcgggacttgaggacag 307 |||||||| ||||| || ||||||| || || |||||||||||||| ||||| ||||| | Sbjct: 93295 aagaaacagtggtccctcagttgacaacatcaaggaccagcttgcgtgacttcaggacgg 93354 Query: 308 accacctcatgcgacggtagtatgcggcttggagaagagcaagtgacagtaggaagatcc 367 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 93355 accacctcatgcgacggtagtatgcggcttggagaagtgcaagtgacagtaggaagatcc 93414 Query: 368 atttgacacccatc 381 |||| || |||||| Sbjct: 93415 atttcactcccatc 93428 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 635 ccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaatcgggctgctt 694 ||||||||||||| ||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 94441 ccttcgtgataagactgagatctggtgggtatgccccaccatttgcaaaacgggctgctt 94500 Query: 695 gctcatttggat 706 |||||||||||| Sbjct: 94501 gctcatttggat 94512 Score = 107 bits (54), Expect = 5e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 564 ctgaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggcc 623 ||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 94285 ctgaacaccggcaggtggatcacggtaaccagtaagaagagcaaacacatagttctggcc 94344 Query: 624 atcgtgccttgcct 637 || ||||||||||| Sbjct: 94345 attgtgccttgcct 94358 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 381 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 440 |||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 93512 cagtttcctctcttccatctcaggttcagctgcccatgacaagaacgaaacgacatcctt 93571 Query: 441 gcccatctg 449 ||||||||| Sbjct: 93572 gcccatctg 93580 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 109 aaatgcttttgcagcagaggaagaaaaca 137 ||||||||||||||||||||||||||||| Sbjct: 93168 aaatgcttttgcagcagaggaagaaaaca 93196 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 32 ttctgttagaagtatgttggtaccattcaggta 64 |||||||||||| || |||||||||||||||| Sbjct: 93101 ttctgttagaagcttgctggtaccattcaggta 93133
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 172 bits (87), Expect = 1e-39 Identities = 111/119 (93%) Strand = Plus / Plus Query: 447 ctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatctt 506 |||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||||| Sbjct: 13410209 ctgggcttcagtggcaggagtaccatcttcatattcaacagctccatctataagcatctt 13410268 Query: 507 aggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatct 565 ||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 13410269 gggcatagctatggcaccaccagggaagtagggattgtaatgcaaaccctcacggatct 13410327 Score = 163 bits (82), Expect = 1e-36 Identities = 122/134 (91%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 249 aagaaacaatggtcact-agttgacgacgtccaggaccagcttgcgggacttgaggacag 307 |||||||| ||||| || ||||||| || || |||||||||||||| ||||| ||||| | Sbjct: 13409832 aagaaacagtggtccctcagttgacaacatcaaggaccagcttgcgtgacttcaggacgg 13409891 Query: 308 accacctcatgcgacggtagtatgcggcttggagaagagcaagtgacagtaggaagatcc 367 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 13409892 accacctcatgcgacggtagtatgcggcttggagaagtgcaagtgacagtaggaagatcc 13409951 Query: 368 atttgacacccatc 381 |||| || |||||| Sbjct: 13409952 atttcactcccatc 13409965 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 635 ccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaatcgggctgctt 694 ||||||||||||| ||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 13410978 ccttcgtgataagactgagatctggtgggtatgccccaccatttgcaaaacgggctgctt 13411037 Query: 695 gctcatttggat 706 |||||||||||| Sbjct: 13411038 gctcatttggat 13411049 Score = 107 bits (54), Expect = 5e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 564 ctgaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggcc 623 ||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 13410822 ctgaacaccggcaggtggatcacggtaaccagtaagaagagcaaacacatagttctggcc 13410881 Query: 624 atcgtgccttgcct 637 || ||||||||||| Sbjct: 13410882 attgtgccttgcct 13410895 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 381 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 440 |||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 13410049 cagtttcctctcttccatctcaggttcagctgcccatgacaagaacgaaacgacatcctt 13410108 Query: 441 gcccatctg 449 ||||||||| Sbjct: 13410109 gcccatctg 13410117 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 109 aaatgcttttgcagcagaggaagaaaaca 137 ||||||||||||||||||||||||||||| Sbjct: 13409705 aaatgcttttgcagcagaggaagaaaaca 13409733 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 32 ttctgttagaagtatgttggtaccattcaggta 64 |||||||||||| || |||||||||||||||| Sbjct: 13409638 ttctgttagaagcttgctggtaccattcaggta 13409670
>gb|AY088099.1| Arabidopsis thaliana clone 41320 mRNA, complete sequence Length = 1361 Score = 172 bits (87), Expect = 1e-39 Identities = 336/419 (80%) Strand = Plus / Minus Query: 265 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 324 ||||| || ||||| || |||||||||||||||||||| || ||||| ||| || | | Sbjct: 1036 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccatttcagtcgcctg 977 Query: 325 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 384 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 976 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatcagt 917 Query: 385 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 444 ||||||||||||||||| || ||||||||||| | |||||| || || | ||| || ||| Sbjct: 916 ttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttaccc 857 Query: 445 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 504 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 856 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 797 Query: 505 ttaggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatc 564 || ||||| || || || || |||||||| || |||||||| || | ||||| | |||| Sbjct: 796 ttcggcatagcaattgctcccccagggaaataaggattgtagtgtaacccctctctaatc 737 Query: 565 tgaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggcca 624 | |||||||| || ||| |||||||||| ||||| ||||| || ||||| | ||| Sbjct: 736 gatatgccagcagggggatcacggtaaccagtcagaagcgcaaagacatagtttggacca 677 Query: 625 tcgtgccttgccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaa 683 | ||| | |||||| |||||||| || ||||| || ||||| || |||||||| ||||| Sbjct: 676 ttgtgacgtgccttagtgataagacttagatcaggaggatacgctccaccattagcaaa 618
>ref|NM_113638.2| Arabidopsis thaliana electron transporter/ electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex AT3G27240 mRNA, complete cds Length = 1414 Score = 157 bits (79), Expect = 6e-35 Identities = 334/419 (79%) Strand = Plus / Minus Query: 265 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 324 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 1058 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 999 Query: 325 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 384 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 998 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatcagt 939 Query: 385 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 444 ||||||||||||||||| || ||||||||||| | |||||| || || | ||| || ||| Sbjct: 938 ttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttaccc 879 Query: 445 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 504 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 878 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 819 Query: 505 ttaggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatc 564 || ||||| || || || || |||||||| || |||||||| || | ||||| | |||| Sbjct: 818 ttcggcatagcaattgctcccccagggaaataaggattgtagtgtaacccctctctaatc 759 Query: 565 tgaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggcca 624 | |||||||| || ||| |||||||||| ||||| ||||| || ||||| | ||| Sbjct: 758 gatatgccagcagggggatcacggtaaccagtcagaagcgcaaagacatagtttggacca 699 Query: 625 tcgtgccttgccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaa 683 | ||| | |||||| || ||||| || ||||| || ||||| || |||||||| ||||| Sbjct: 698 ttgtgacgtgccttagttataagacttagatcaggaggatacgctccaccattagcaaa 640
>gb|AF458338.1|AF458338 Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds Length = 924 Score = 157 bits (79), Expect = 6e-35 Identities = 334/419 (79%) Strand = Plus / Minus Query: 265 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 324 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 923 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 864 Query: 325 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 384 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 863 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatcagt 804 Query: 385 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 444 ||||||||||||||||| || ||||||||||| | |||||| || || | ||| || ||| Sbjct: 803 ttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttaccc 744 Query: 445 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 504 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 743 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 684 Query: 505 ttaggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatc 564 || ||||| || || || || |||||||| || |||||||| || | ||||| | |||| Sbjct: 683 ttcggcatagcaattgctcccccagggaaataaggattgtagtgtaacccctctctaatc 624 Query: 565 tgaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggcca 624 | |||||||| || ||| |||||||||| ||||| ||||| || ||||| | ||| Sbjct: 623 gatatgccagcagggggatcacggtaaccagtcagaagcgcaaagacatagtttggacca 564 Query: 625 tcgtgccttgccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaa 683 | ||| | |||||| || ||||| || ||||| || ||||| || |||||||| ||||| Sbjct: 563 ttgtgacgtgccttagttataagacttagatcaggaggatacgctccaccattagcaaa 505
>gb|AY054246.1| Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds Length = 1414 Score = 157 bits (79), Expect = 6e-35 Identities = 334/419 (79%) Strand = Plus / Minus Query: 265 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 324 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 1058 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 999 Query: 325 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 384 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 998 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatcagt 939 Query: 385 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 444 ||||||||||||||||| || ||||||||||| | |||||| || || | ||| || ||| Sbjct: 938 ttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttaccc 879 Query: 445 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 504 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 878 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 819 Query: 505 ttaggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatc 564 || ||||| || || || || |||||||| || |||||||| || | ||||| | |||| Sbjct: 818 ttcggcatagcaattgctcccccagggaaataaggattgtagtgtaacccctctctaatc 759 Query: 565 tgaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggcca 624 | |||||||| || ||| |||||||||| ||||| ||||| || ||||| | ||| Sbjct: 758 gatatgccagcagggggatcacggtaaccagtcagaagcgcaaagacatagtttggacca 699 Query: 625 tcgtgccttgccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaa 683 | ||| | |||||| || ||||| || ||||| || ||||| || |||||||| ||||| Sbjct: 698 ttgtgacgtgccttagttataagacttagatcaggaggatacgctccaccattagcaaa 640
>emb|BX824887.1|CNS0A6WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1297 Score = 157 bits (79), Expect = 6e-35 Identities = 334/419 (79%) Strand = Plus / Minus Query: 265 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 324 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 1007 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 948 Query: 325 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 384 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 947 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatcagt 888 Query: 385 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 444 ||||||||||||||||| || ||||||||||| | |||||| || || | ||| || ||| Sbjct: 887 ttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttaccc 828 Query: 445 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 504 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 827 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 768 Query: 505 ttaggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatc 564 || ||||| || || || || |||||||| || |||||||| || | ||||| | |||| Sbjct: 767 ttcggcatagcaattgctcccccagggaaataaggattgtagtgtaacccctctctaatc 708 Query: 565 tgaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggcca 624 | |||||||| || ||| |||||||||| ||||| ||||| || ||||| | ||| Sbjct: 707 gatatgccagcagggggatcacggtaaccagtcagaagcgcaaagacatagtttggacca 648 Query: 625 tcgtgccttgccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaa 683 | ||| | |||||| || ||||| || ||||| || ||||| || |||||||| ||||| Sbjct: 647 ttgtgacgtgccttagttataagacttagatcaggaggatacgctccaccattagcaaa 589
>emb|BX824618.1|CNS0A4TF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1238 Score = 157 bits (79), Expect = 6e-35 Identities = 334/419 (79%) Strand = Plus / Minus Query: 265 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 324 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 1006 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 947 Query: 325 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 384 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 946 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatcagt 887 Query: 385 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 444 ||||||||||||||||| || ||||||||||| | |||||| || || | ||| || ||| Sbjct: 886 ttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttaccc 827 Query: 445 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 504 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 826 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 767 Query: 505 ttaggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatc 564 || ||||| || || || || |||||||| || |||||||| || | ||||| | |||| Sbjct: 766 ttcggcatagcaattgctcccccagggaaataaggattgtagtgtaacccctctctaatc 707 Query: 565 tgaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggcca 624 | |||||||| || ||| |||||||||| ||||| ||||| || ||||| | ||| Sbjct: 706 gatatgccagcagggggatcacggtaaccagtcagaagcgcaaagacatagtttggacca 647 Query: 625 tcgtgccttgccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaa 683 | ||| | |||||| || ||||| || ||||| || ||||| || |||||||| ||||| Sbjct: 646 ttgtgacgtgccttagttataagacttagatcaggaggatacgctccaccattagcaaa 588
>emb|X62124.1|STCYC1G S.tuberosum cycl gene encoding cytochrome c1 Length = 1264 Score = 151 bits (76), Expect = 4e-33 Identities = 283/352 (80%) Strand = Plus / Minus Query: 266 agttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggt 325 ||||||| || || || |||| |||||| || |||||||||||||| |||| || |||| Sbjct: 1073 agttgacaacatcaagaaccaacttgcgagatttgaggacagaccatctcaaacggcggt 1014 Query: 326 agtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagtt 385 |||| || ||||||||||| || || || | | || |||||||||| ||||||||| | Sbjct: 1013 agtaagctgcttggagaagtgcgagagataaaacaaatatccatttgaaacccatcagct 954 Query: 386 tcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccca 445 | ||||||||||| || ||||| || ||||| |||||||| || || ||||| || |||| Sbjct: 953 ttctctcttccatctctggctccgcagcccaggacaagaatgagacaacatcttttccca 894 Query: 446 tctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatct 505 |||| || || |||||||| | ||||| |||||||||| || ||||| ||||||| | Sbjct: 893 tctgtgcctcggttgcagggatgccatcctcatactcaacggcaccatcattaagcattt 834 Query: 506 taggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatct 565 ||||||| ||||| || |||||||||||||| ||||| || || || || || |||||| Sbjct: 833 taggcattgctatagctccaccagggaagtaaggattatagtgaagtccttctcgaatcg 774 Query: 566 gaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagtt 617 ||||||||||| ||||| |||| |||| ||||||||||| || ||||| Sbjct: 773 agacaccagcaggagggtcgcggtacgcagttagaagagcaaaaacatagtt 722
>emb|BX823783.1|CNS0A6LU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1366 Score = 149 bits (75), Expect = 1e-32 Identities = 333/419 (79%) Strand = Plus / Minus Query: 265 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 324 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 1024 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 965 Query: 325 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 384 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 964 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgagacccatcagt 905 Query: 385 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 444 ||||||||||||||||| || ||||||||||| | ||||| || || | ||| || ||| Sbjct: 904 ttcctctcttccatttctggttcagctgcccaggcgaagaatgatacaatatctttaccc 845 Query: 445 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 504 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 844 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 785 Query: 505 ttaggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatc 564 || ||||| || || || || |||||||| || |||||||| || | ||||| | |||| Sbjct: 784 ttcggcatagcaattgctcccccagggaaataaggattgtagtgtaacccctctctaatc 725 Query: 565 tgaacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggcca 624 | |||||||| || ||| |||||||||| ||||| ||||| || ||||| | ||| Sbjct: 724 gatatgccagcagggggatcacggtaaccagtcagaagcgcaaagacatagtttggacca 665 Query: 625 tcgtgccttgccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaa 683 | ||| | |||||| || ||||| || ||||| || ||||| || |||||||| ||||| Sbjct: 664 ttgtgacgtgccttagttataagacttagatcaggaggatacgctccaccattagcaaa 606
>dbj|AK073125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033010L17, full insert sequence Length = 2109 Score = 145 bits (73), Expect = 2e-31 Identities = 121/137 (88%) Strand = Plus / Minus Query: 567 aacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggccatc 626 ||||||||||||||| ||| | |||||||| ||||||||||| || ||||||||||||| Sbjct: 836 aacaccagcaggtggatcacgataaccagtgagaagagcaaaaacatagttctggccatt 777 Query: 627 gtgccttgccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaatcg 686 |||||| ||||| ||||| || |||||||| ||||| |||||||| ||||||| |||||| Sbjct: 776 gtgcctggcctttgtgattagactgagatccggggggtatgccccgccatttgaaaatcg 717 Query: 687 ggctgcttgctcatttg 703 |||||||||||||||| Sbjct: 716 agctgcttgctcatttg 700 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 487 gctccatccataagcatcttaggcatggctatggcaccaccagggaagtagggattgtaa 546 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2104 gctccatcaataagcatcttgggcatggctatggcaccaccagggaagtagggattgtaa 2045 Query: 547 tgcagaccctcacgaatct 565 |||| || |||||||||| Sbjct: 2044 tgcaagccttcacgaatct 2026
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 141 bits (71), Expect = 4e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 447 ctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatctt 506 ||||||||| || || ||||| |||||||||||||| | |||||||| ||||||||||| Sbjct: 41070942 ctgggcttctgtagctggagtgccatcttcatactcgactgctccatcaataagcatctt 41070883 Query: 507 aggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatct 565 ||||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 41070882 gggcatggctatggcaccaccagggaagtagggattgtaatgcaagccttcacgaatct 41070824 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 567 aacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggccatc 626 ||||||||||||||| ||| | |||||||| ||||||||||| || ||||||||||||| Sbjct: 41069634 aacaccagcaggtggatcacgataaccagtgagaagagcaaaaacatagttctggccatt 41069575 Query: 627 gtgccttgcct 637 |||||| |||| Sbjct: 41069574 gtgcctggcct 41069564 Score = 73.8 bits (37), Expect = 7e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 635 ccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaatcgggctgctt 694 |||| ||||| || |||||||| ||||| |||||||| ||||||| |||||| ||||||| Sbjct: 41069477 cctttgtgattagactgagatccggggggtatgccccgccatttgaaaatcgagctgctt 41069418 Query: 695 gctcatttg 703 ||||||||| Sbjct: 41069417 gctcatttg 41069409 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 280 aggaccagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttgg 339 |||||||||||||| |||||| ||| |||||| ||||||| ||||| ||||| ||||| Sbjct: 41071289 aggaccagcttgcgcgacttgtagacggaccacttcatgcgccggtaatatgcagcttgc 41071230 Query: 340 agaagagcaagtgacagtaggaagatccatttgacacccatc 381 ||||| || || || ||||| || |||||||| || |||||| Sbjct: 41071229 agaagtgcgagggagagtagaaaaatccatttcactcccatc 41071188 Score = 63.9 bits (32), Expect = 7e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 381 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 440 |||||| ||||||||||| |||||||| || ||||| ||||||||||| || ||||| || Sbjct: 41071104 cagttttctctcttccatctcaggctccgccgcccatgacaagaacgagacaacatcttt 41071045 Query: 441 gcccatct 448 ||||||| Sbjct: 41071044 tcccatct 41071037 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 agattgtacccaaggtatgat 162 ||||||||||||||||||||| Sbjct: 13388369 agattgtacccaaggtatgat 13388389
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 141 bits (71), Expect = 4e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 447 ctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatctt 506 ||||||||| || || ||||| |||||||||||||| | |||||||| ||||||||||| Sbjct: 107872 ctgggcttctgtagctggagtgccatcttcatactcgactgctccatcaataagcatctt 107813 Query: 507 aggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctcacgaatct 565 ||||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 107812 gggcatggctatggcaccaccagggaagtagggattgtaatgcaagccttcacgaatct 107754 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 567 aacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggccatc 626 ||||||||||||||| ||| | |||||||| ||||||||||| || ||||||||||||| Sbjct: 106564 aacaccagcaggtggatcacgataaccagtgagaagagcaaaaacatagttctggccatt 106505 Query: 627 gtgccttgcct 637 |||||| |||| Sbjct: 106504 gtgcctggcct 106494 Score = 73.8 bits (37), Expect = 7e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 635 ccttcgtgataaggctgagatctgggggatatgccccaccatttgcaaatcgggctgctt 694 |||| ||||| || |||||||| ||||| |||||||| ||||||| |||||| ||||||| Sbjct: 106407 cctttgtgattagactgagatccggggggtatgccccgccatttgaaaatcgagctgctt 106348 Query: 695 gctcatttg 703 ||||||||| Sbjct: 106347 gctcatttg 106339 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 280 aggaccagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttgg 339 |||||||||||||| |||||| ||| |||||| ||||||| ||||| ||||| ||||| Sbjct: 108219 aggaccagcttgcgcgacttgtagacggaccacttcatgcgccggtaatatgcagcttgc 108160 Query: 340 agaagagcaagtgacagtaggaagatccatttgacacccatc 381 ||||| || || || ||||| || |||||||| || |||||| Sbjct: 108159 agaagtgcgagggagagtagaaaaatccatttcactcccatc 108118 Score = 63.9 bits (32), Expect = 7e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 381 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 440 |||||| ||||||||||| |||||||| || ||||| ||||||||||| || ||||| || Sbjct: 108034 cagttttctctcttccatctcaggctccgccgcccatgacaagaacgagacaacatcttt 107975 Query: 441 gcccatct 448 ||||||| Sbjct: 107974 tcccatct 107967
>ref|NM_123446.3| Arabidopsis thaliana electron transporter/ electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex AT5G40810 mRNA, complete cds Length = 1366 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 352 gacagtaggaagatccatttgacacccatcagtttcctctcttccatttcaggctcagct 411 ||||||| ||| |||||||||| ||||||| ||||||||||||||| || || |||||| Sbjct: 961 gacagtaagaatatccatttgaaccccatcaatttcctctcttccatctctggttcagct 902 Query: 412 gcccacgacaagaacgacacgacatccttgcccatctgggcttcagttgcaggagtacca 471 ||||| |||||||| || || ||||| || |||||||| ||||| ||||||||||| ||| Sbjct: 901 gcccaggacaagaaggatacaacatctttacccatctgtgcttctgttgcaggagttcca 842 Query: 472 tcttcatactcaatagctccatccataagcatcttaggcatggctatggcaccaccaggg 531 |||||||| || | |||| |||| | ||||| || ||||| || || || ||||||||| Sbjct: 841 tcttcatattccacagcttcatcgttgagcatttttggcatagcgattgctccaccaggg 782 Query: 532 aagtagggattgta 545 || || |||||||| Sbjct: 781 aaataaggattgta 768
>gb|AY116937.1| Arabidopsis thaliana AT5g40810/MHK7_4 mRNA, complete cds Length = 924 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 352 gacagtaggaagatccatttgacacccatcagtttcctctcttccatttcaggctcagct 411 ||||||| ||| |||||||||| ||||||| ||||||||||||||| || || |||||| Sbjct: 836 gacagtaagaatatccatttgaaccccatcaatttcctctcttccatctctggttcagct 777 Query: 412 gcccacgacaagaacgacacgacatccttgcccatctgggcttcagttgcaggagtacca 471 ||||| |||||||| || || ||||| || |||||||| ||||| ||||||||||| ||| Sbjct: 776 gcccaggacaagaaggatacaacatctttacccatctgtgcttctgttgcaggagttcca 717 Query: 472 tcttcatactcaatagctccatccataagcatcttaggcatggctatggcaccaccaggg 531 |||||||| || | |||| |||| | ||||| || ||||| || || || ||||||||| Sbjct: 716 tcttcatattccacagcttcatcgttgagcatttttggcatagcgattgctccaccaggg 657 Query: 532 aagtagggattgta 545 || || |||||||| Sbjct: 656 aaataaggattgta 643
>gb|AY050340.1| Arabidopsis thaliana AT5g40810/MHK7_4 mRNA, complete cds Length = 1238 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 352 gacagtaggaagatccatttgacacccatcagtttcctctcttccatttcaggctcagct 411 ||||||| ||| |||||||||| ||||||| ||||||||||||||| || || |||||| Sbjct: 908 gacagtaagaatatccatttgaaccccatcaatttcctctcttccatctctggttcagct 849 Query: 412 gcccacgacaagaacgacacgacatccttgcccatctgggcttcagttgcaggagtacca 471 ||||| |||||||| || || ||||| || |||||||| ||||| ||||||||||| ||| Sbjct: 848 gcccaggacaagaaggatacaacatctttacccatctgtgcttctgttgcaggagttcca 789 Query: 472 tcttcatactcaatagctccatccataagcatcttaggcatggctatggcaccaccaggg 531 |||||||| || | |||| |||| | ||||| || ||||| || || || ||||||||| Sbjct: 788 tcttcatattccacagcttcatcgttgagcatttttggcatagcgattgctccaccaggg 729 Query: 532 aagtagggattgta 545 || || |||||||| Sbjct: 728 aaataaggattgta 715
>emb|BX829693.1|CNS0A056 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1241 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 352 gacagtaggaagatccatttgacacccatcagtttcctctcttccatttcaggctcagct 411 ||||||| ||| |||||||||| ||||||| ||||||||||||||| || || |||||| Sbjct: 961 gacagtaagaatatccatttgaaccccatcaatttcctctcttccatctctggttcagct 902 Query: 412 gcccacgacaagaacgacacgacatccttgcccatctgggcttcagttgcaggagtacca 471 ||||| |||||||| || || ||||| || |||||||| ||||| ||||||||||| ||| Sbjct: 901 gcccaggacaagaaggatacaacatctttacccatctgtgcttctgttgcaggagttcca 842 Query: 472 tcttcatactcaatagctccatccataagcatcttaggcatggctatggcaccaccaggg 531 |||||||| || | |||| |||| | ||||| || ||||| || || || ||||||||| Sbjct: 841 tcttcatattccacagcttcatcgttgagcatttttggcatagcgattgctccaccaggg 782 Query: 532 aagtagggattgta 545 || || |||||||| Sbjct: 781 aaataaggattgta 768
>emb|BX824810.1|CNS0A6Y4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZE04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1267 Score = 113 bits (57), Expect = 8e-22 Identities = 181/221 (81%), Gaps = 1/221 (0%) Strand = Plus / Minus Query: 265 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 324 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 982 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 923 Query: 325 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacaccca-tcag 383 ||||| || |||||||||||||| || | |||||||| |||||||||| ||||| |||| Sbjct: 922 tagtaagcagcttggagaagagcgagatatagtaggaatatccatttgaaacccaatcag 863 Query: 384 tttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgcc 443 |||||||||||||||||| || ||||||||||| | |||||| || || | ||| || || Sbjct: 862 tttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttacc 803 Query: 444 catctgggcttcagttgcaggagtaccatcttcatactcaa 484 |||||| || || || || || ||||||||||||||||| Sbjct: 802 catctgtgcctctgtggcggggacaccatcttcatactcaa 762
>gb|AC185524.1| Medicago truncatula clone mth2-62g23, complete sequence Length = 40651 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 451 gcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatcttaggc 510 ||||| || ||||| |||||||||||||| |||| ||| ||||| |||||||||||||| Sbjct: 10339 gcttcggtagcaggggtaccatcttcatattcaacagcgccatcattaagcatcttaggc 10280 Query: 511 atggctatggcaccaccagggaagtagggattgtaatgca 550 ||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 10279 atggcaatggctccaccagggaagtaaggattgtaatgca 10240 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 381 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 440 |||||| ||||||||||| ||||| || |||||||| ||||| || ||||| ||||| || Sbjct: 10522 cagttttctctcttccatctcaggttccgctgcccaagacaaaaatgacacaacatcttt 10463 Query: 441 gcccatctg 449 |||||||| Sbjct: 10462 ccccatctg 10454 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 567 aacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggccat 625 |||||||||||| |||||| | ||||| || || ||||||||||| |||||||| |||| Sbjct: 9619 aacaccagcaggggggtcacgataaccggttaggagagcaaacacatagttctgaccat 9561 Score = 46.1 bits (23), Expect = 0.16 Identities = 62/75 (82%) Strand = Plus / Minus Query: 264 ctagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacg 323 ||||||||| || || || |||| |||||| ||||| || |||||||||| | ||||| Sbjct: 10720 ctagttgacaacatcaagaaccaacttgcgagacttaagaacagaccaccgaagacgacg 10661 Query: 324 gtagtatgcggcttg 338 |||||||||||||| Sbjct: 10660 atagtatgcggcttg 10646
>gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete sequence Length = 134105 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 451 gcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatcttaggc 510 ||||| || ||||| |||||||||||||| |||| ||| ||||| |||||||||||||| Sbjct: 106731 gcttcggtagcaggggtaccatcttcatattcaacagcgccatcattaagcatcttaggc 106672 Query: 511 atggctatggcaccaccagggaagtagggattgtaatgca 550 ||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 106671 atggcaatggctccaccagggaagtaaggattgtaatgca 106632 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 567 aacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggccat 625 |||||||||||| |||||| | ||||| |||||||||||||||||||||||||| |||| Sbjct: 77459 aacaccagcaggggggtcacgataaccggtaagaagagcaaacacgtagttctgaccat 77401 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 451 gcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatcttaggc 510 ||||| || ||||| |||||||||||||| |||| ||| || || ||||||| |||||| Sbjct: 77944 gcttcggtagcaggggtaccatcttcatattcaacagcaccgtcattaagcattttaggc 77885 Query: 511 atggctatggcaccaccagggaagtagggattgtaatgcag 551 ||||| ||||| |||||||| || || ||||| || ||||| Sbjct: 77884 atggcaatggctccaccaggaaaataaggattatagtgcag 77844 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 381 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 440 |||||| ||||||||||| ||||| || |||||||| ||||| || ||||| ||||| || Sbjct: 106914 cagttttctctcttccatctcaggttccgctgcccaagacaaaaatgacacaacatcttt 106855 Query: 441 gcccatctg 449 |||||||| Sbjct: 106854 ccccatctg 106846 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 381 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 440 |||||| ||||||||||| ||||| || |||||||| ||||| || ||||| ||||| || Sbjct: 78105 cagttttctctcttccatctcaggttctgctgcccaagacaaaaatgacacaacatcttt 78046 Query: 441 gcccatctg 449 |||||||| Sbjct: 78045 ccccatctg 78037 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 567 aacaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttctggccat 625 |||||||||||| |||||| | ||||| || || ||||||||||| |||||||| |||| Sbjct: 106011 aacaccagcaggggggtcacgataaccggttaggagagcaaacacatagttctgaccat 105953 Score = 46.1 bits (23), Expect = 0.16 Identities = 62/75 (82%) Strand = Plus / Minus Query: 264 ctagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacg 323 ||||||||| || || || |||| |||||| ||||| || |||||||||| | ||||| Sbjct: 107112 ctagttgacaacatcaagaaccaacttgcgagacttaagaacagaccaccgaagacgacg 107053 Query: 324 gtagtatgcggcttg 338 |||||||||||||| Sbjct: 107052 atagtatgcggcttg 107038
>gb|L41695.1|PS300038E Eucalyptus globulus bicostata symbiont (F00060) mRNA, ESTun038 Length = 330 Score = 93.7 bits (47), Expect = 7e-16 Identities = 152/187 (81%) Strand = Plus / Minus Query: 364 atccatttgacacccatcagtttcctctcttccatttcaggctcagctgcccacgacaag 423 |||||||||| |||||||| || || |||||||||||||| || || ||||| || ||| Sbjct: 233 atccatttgaatcccatcagctttctttcttccatttcaggttctgcagcccatgataag 174 Query: 424 aacgacacgacatccttgcccatctgggcttcagttgcaggagtaccatcttcatactca 483 || | |||||||| || |||||||| ||||| ||||| || || |||||||||||||| Sbjct: 173 aatgttacgacatctttccccatctgagcttctgttgctggggtcccatcttcatactcg 114 Query: 484 atagctccatccataagcatcttaggcatggctatggcaccaccagggaagtagggattg 543 | ||| ||||| |||||||| | ||||| || || || |||||||| || || |||||| Sbjct: 113 acagcaccatcaataagcatttgcggcattgcaattgctccaccaggaaaatatggattg 54 Query: 544 taatgca 550 || |||| Sbjct: 53 tagtgca 47
>dbj|AP000381.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K17E12 Length = 63604 Score = 73.8 bits (37), Expect = 7e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 265 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 324 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 20014 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 20073 Query: 325 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatc 381 ||||| || |||||||||||||| || || |||||||| |||||||||| ||||||| Sbjct: 20074 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatc 20130 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 381 cagtttcctctcttccatttcaggctcagctgcccacgacaagaa 425 ||||||||||||||||||||| || ||||||||||| | |||||| Sbjct: 20428 cagtttcctctcttccatttctggttcagctgcccaggccaagaa 20472 Score = 44.1 bits (22), Expect = 0.62 Identities = 64/78 (82%) Strand = Plus / Plus Query: 468 accatcttcatactcaatagctccatccataagcatcttaggcatggctatggcaccacc 527 ||||||||||||||||| |||| |||| | ||||| || ||||| || || || || || Sbjct: 20615 accatcttcatactcaacagcttcatcattgagcattttcggcatagcaattgctccccc 20674 Query: 528 agggaagtagggattgta 545 |||||| || |||||||| Sbjct: 20675 agggaaataaggattgta 20692
>gb|S66866.1|S66866 Solanum tuberosum cytochrome c1 precursor, gene, complete cds; mitochondrial gene for mitochondrial product Length = 6007 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 266 agttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggt 325 ||||||| || || ||||||| |||||| || |||||||||||||| |||| || |||| Sbjct: 5541 agttgacaacatcaaggaccaacttgcgagatttgaggacagaccatctcaaacggcggt 5482 Query: 326 agtatgcggcttggagaag 344 |||| || ||||||||||| Sbjct: 5481 agtaagctgcttggagaag 5463 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 469 ccatcttcatactcaatagctccatccataagcatcttaggcatggctatggcaccacca 528 ||||| |||||||||| || ||||| ||||||| |||||||| ||||| || |||||| Sbjct: 4951 ccatcctcatactcaacggcaccatcattaagcattttaggcattgctatagctccacca 4892 Query: 529 gggaagtagggatt 542 |||||||| ||||| Sbjct: 4891 gggaagtaaggatt 4878 Score = 46.1 bits (23), Expect = 0.16 Identities = 50/59 (84%) Strand = Plus / Minus Query: 388 ctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgcccat 446 ||||||||||| || |||||||| ||||| |||||||| || || ||||| || ||||| Sbjct: 5116 ctctcttccatctctggctcagcagcccatgacaagaatgagacaacatcttttcccat 5058 Score = 44.1 bits (22), Expect = 0.62 Identities = 43/50 (86%) Strand = Plus / Minus Query: 568 acaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagtt 617 ||||||||||| ||||| |||| ||||| ||||||||||| || ||||| Sbjct: 4545 acaccagcaggagggtcgcggtagccagttagaagagcaaaaacatagtt 4496
>dbj|AB011477.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHK7 Length = 78181 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 384 tttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgcc 443 ||||||||||||||| || || ||||||||||| |||||||| || || ||||| || || Sbjct: 16178 tttcctctcttccatctctggttcagctgcccaggacaagaaggatacaacatctttacc 16119 Query: 444 catctg 449 |||||| Sbjct: 16118 catctg 16113 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 451 gcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatcttaggc 510 ||||| ||||||||||| ||||||||||| || | |||| |||| | ||||| || ||| Sbjct: 15991 gcttctgttgcaggagttccatcttcatattccacagcttcatcgttgagcatttttggc 15932 Query: 511 atggctatggcaccaccagggaagtagggattgta 545 || || || || ||||||||||| || |||||||| Sbjct: 15931 atagcgattgctccaccagggaaataaggattgta 15897
>emb|AJ417788.2|CRE417788 Chlamydomonas reinhardtii mitochondrion cyc1 gene for cytochrome c1 Length = 6404 Score = 48.1 bits (24), Expect = 0.040 Identities = 57/68 (83%) Strand = Plus / Minus Query: 499 agcatcttaggcatggctatggcaccaccagggaagtagggattgtaatgcagaccctca 558 |||||||| |||||||| ||||| || || ||||||||||| ||||| | ||| ||||| Sbjct: 4162 agcatcttgggcatggcgatggcgccgcccgggaagtaggggttgtagtacaggccctcg 4103 Query: 559 cgaatctg 566 || ||||| Sbjct: 4102 cggatctg 4095
>gb|AY433126.1| Aedes aegypti ASAP ID: 36451 cytochrome c1 mRNA sequence Length = 528 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 517 atggcaccaccagggaagtagggattgtaat 547 |||||||| || ||||||||||||||||||| Sbjct: 137 atggcacctcccgggaagtagggattgtaat 107
>gb|DQ440286.1| Aedes aegypti clone AET-364 mitochondrial cytochrome c1 mRNA, complete cds; nuclear gene for mitochondrial product Length = 756 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 517 atggcaccaccagggaagtagggattgtaat 547 |||||||| || ||||||||||||||||||| Sbjct: 500 atggcacctcccgggaagtagggattgtaat 470
>gb|AF245393.1|AF245393 Chlamydomonas reinhardtii cytochrome c1 mRNA, complete cds; nuclear gene for mitochondrial product Length = 1809 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 499 agcatcttaggcatggctatggcaccaccagggaagtagggattgta 545 |||||||| |||||||| ||||| || || ||||||||||| ||||| Sbjct: 754 agcatcttgggcatggcgatggcgccgcccgggaagtaggggttgta 708
>emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chromosome 9q22.1-22.33 Contains the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 176422 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 cagaggaagaaaacaaaagaga 144 |||||||||||||||||||||| Sbjct: 83078 cagaggaagaaaacaaaagaga 83099
>emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chromosome 4, complete sequence Length = 205589 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 377 ccatcagtttcctctcttccatttcaggctcagc 410 |||||||||||||| ||||||||||| |||||| Sbjct: 36911 ccatcagtttcctcatttccatttcagtctcagc 36878
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 agattgtacccaaggtatgat 162 ||||||||||||||||||||| Sbjct: 84517 agattgtacccaaggtatgat 84537
>gb|AC123047.3| Mus musculus BAC clone RP24-378B22 from chromosome 7, complete sequence Length = 157795 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 372 gacacccatcagtttcctctc 392 ||||||||||||||||||||| Sbjct: 66539 gacacccatcagtttcctctc 66559
>emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in linkage group 5, complete sequence Length = 144909 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 cccaaggtatgatgggagacaacca 174 |||||||||||||||||||| |||| Sbjct: 34579 cccaaggtatgatgggagaccacca 34603
>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete sequence Length = 249943 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gaggaagaaaacaaaagagat 145 ||||||||||||||||||||| Sbjct: 186971 gaggaagaaaacaaaagagat 186991
>emb|BX067366.1|CNS09O56 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC51AB05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 810 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 790 atggcaccaccggggaagtacgggttgtaatactgaccctc 750
>emb|BX065413.1|CNS09MMX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC49BC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 930 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 780 atggcaccaccggggaagtacgggttgtaatactgaccctc 740
>emb|BX059655.1|CNS09I6Z Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC4CE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 934 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 575 atggcaccaccggggaagtacgggttgtaatactgaccctc 615
>emb|BX058738.1|CNS09HHI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC39BB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 977 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 604 atggcaccaccggggaagtacgggttgtaatactgaccctc 644
>emb|BX058737.1|CNS09HHH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC39BB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 975 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 773 atggcaccaccggggaagtacgggttgtaatactgaccctc 733
>emb|BX033568.1|CNS08Y2C Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA5AD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 991 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 948 atggcaccaccggggaagtacgggttgtaatactgaccctc 988
>emb|BX028780.1|CNS08UDC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA42DH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 520 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 193 atggcaccaccggggaagtacgggttgtaatactgaccctc 233
>emb|BX028779.1|CNS08UDB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42DH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1046 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 683 atggcaccaccggggaagtacgggttgtaatactgaccctc 643
>emb|BX027537.1|CNS08TET Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41AH05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 830 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 698 atggcaccaccggggaagtacgggttgtaatactgaccctc 738
>emb|BX027536.1|CNS08TES Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41AH05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 592 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 362 atggcaccaccggggaagtacgggttgtaatactgaccctc 322
>emb|BX014168.1|CNS08J3G Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA21BA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 778 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 685 atggcaccaccggggaagtacgggttgtaatactgaccctc 725
>emb|BX014167.1|CNS08J3F Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA21BA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 906 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 340 atggcaccaccggggaagtacgggttgtaatactgaccctc 300
>emb|BX011244.1|CNS08GU8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA17DH03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 928 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 412 atggcaccaccggggaagtacgggttgtaatactgaccctc 372
>emb|AL590503.11| Mouse DNA sequence from clone RP23-128M23 on chromosome 13, complete sequence Length = 169547 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 acagtaggaagatccatttga 373 ||||||||||||||||||||| Sbjct: 112378 acagtaggaagatccatttga 112358
>gb|AC021549.9| Homo sapiens chromosome 18, clone RP11-650P15, complete sequence Length = 183066 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 gtttcctctcttccatttcag 403 ||||||||||||||||||||| Sbjct: 103612 gtttcctctcttccatttcag 103592
>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome Length = 1176248 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 ttccatttcaggctcagctgcccac 417 |||||| |||||||||||||||||| Sbjct: 522284 ttccatctcaggctcagctgcccac 522260
>gb|AC151841.5| Mus musculus BAC clone RP23-128P10 from chromosome 7, complete sequence Length = 212484 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 gacacccatcagtttcctctc 392 ||||||||||||||||||||| Sbjct: 15284 gacacccatcagtttcctctc 15264
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 agattgtacccaaggtatgat 162 ||||||||||||||||||||| Sbjct: 7913431 agattgtacccaaggtatgat 7913411
>gb|AY177663.1| Homo sapiens desmoglein 4 preproprotein (DSG4) gene, complete cds Length = 37140 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 gtttcctctcttccatttcag 403 ||||||||||||||||||||| Sbjct: 29280 gtttcctctcttccatttcag 29300
>dbj|AP003337.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1111_G12 Length = 112664 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 agattgtacccaaggtatgat 162 ||||||||||||||||||||| Sbjct: 32922 agattgtacccaaggtatgat 32942
>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01 Length = 146144 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 agattgtacccaaggtatgat 162 ||||||||||||||||||||| Sbjct: 128727 agattgtacccaaggtatgat 128747
>ref|XM_308821.2| Anopheles gambiae str. PEST ENSANGP00000021712 (ENSANGG00000019223), partial mRNA Length = 795 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 517 atggcaccaccagggaagtagggattgtaatgcagaccctc 557 ||||||||||| |||||||| || ||||||| | ||||||| Sbjct: 539 atggcaccaccggggaagtacgggttgtaatactgaccctc 499
>dbj|AP003499.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-178H8, complete sequence Length = 193227 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 aatagaaagaagaaacaatgg 260 ||||||||||||||||||||| Sbjct: 31107 aatagaaagaagaaacaatgg 31087
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 agattgtacccaaggtatgat 162 ||||||||||||||||||||| Sbjct: 7983518 agattgtacccaaggtatgat 7983498
>emb|AL773525.5| Mouse DNA sequence from clone RP23-169L4 on chromosome 2, complete sequence Length = 188772 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 385 ttcctctcttccatttcaggctcag 409 ||||||||| ||||||||||||||| Sbjct: 154671 ttcctctctcccatttcaggctcag 154647
>gb|AY439902.1| Armigeres subalbatus ASAP ID: 38945 cytochrome C1 mRNA sequence Length = 1114 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 520 gcaccaccagggaagtagggattgtaat 547 ||||| || ||||||||||||||||||| Sbjct: 727 gcacctcctgggaagtagggattgtaat 700
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 ttccatttcaggctcagctgccca 416 ||||||||| |||||||||||||| Sbjct: 332080 ttccatttccggctcagctgccca 332057
>gb|AC137511.3| Mus musculus BAC clone RP24-313I8 from chromosome 5, complete sequence Length = 168197 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 cacccatcagtttcctctcttcca 397 |||| ||||||||||||||||||| Sbjct: 123541 caccgatcagtttcctctcttcca 123518
>gb|AC119158.10| Mus musculus chromosome 19, clone RP23-434C14, complete sequence Length = 209459 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 agcagaggaagaaaacaaaagaga 144 |||||||||||||||| ||||||| Sbjct: 187590 agcagaggaagaaaactaaagaga 187567
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 ttccatttcaggctcagctgccca 416 ||||||||| |||||||||||||| Sbjct: 1068514 ttccatttctggctcagctgccca 1068537
>emb|AL365444.11| Human DNA sequence from clone RP11-115P16 on chromosome 1 Contains the 3' UTR of a novel gene (DKFZp761P211), the ITPKB gene for inositol 1,4,5-trisphosphate 3-kinase B, two novel genes, a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene and a CpG island, complete sequence Length = 181144 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gggacttgaggacagaccac 312 |||||||||||||||||||| Sbjct: 144667 gggacttgaggacagaccac 144686
>ref|XM_786458.1| PREDICTED: Strongylocentrotus purpuratus similar to cytochrome c-1 (LOC586686), mRNA Length = 1373 Score = 40.1 bits (20), Expect = 9.7 Identities = 44/52 (84%) Strand = Plus / Minus Query: 568 acaccagcaggtgggtcatggtaaccagtaagaagagcaaacacgtagttct 619 ||||||||||| || ||| ||| ||||| ||||||||||| | |||||||| Sbjct: 152 acaccagcaggaggttcacagtatccagtcagaagagcaaagatgtagttct 101
>emb|AL133475.14| Human DNA sequence from clone RP3-357D13 on chromosome 6 Contains the 5' end of the ELOVL4 gene for elongation of very long chain fatty acids (FEN1/ELo2, SUR4/ELo3, yeast)-like 4, a GAPD (glyceraldehyde-3-phosphate dehydrogenase) pseudogene, an RPL35A (60S ribosomal protein L35A) pseudogene, the TTK gene for TTK protein kinase and a putative CpG island, complete sequence Length = 119318 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 cagagtagcaaaatatacaa 192 |||||||||||||||||||| Sbjct: 52499 cagagtagcaaaatatacaa 52518
>ref|XM_961529.1| PREDICTED: Tribolium castaneum similar to CG9924-PC, isoform C (LOC655033), mRNA Length = 1563 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gtttcctctcttccatttca 402 |||||||||||||||||||| Sbjct: 937 gtttcctctcttccatttca 918
>gb|AC145218.29| Medicago truncatula clone mth2-34l18, complete sequence Length = 134519 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tgttgcaatagaaagaagaa 253 |||||||||||||||||||| Sbjct: 18079 tgttgcaatagaaagaagaa 18098
>gb|AC109821.5| Homo sapiens BAC clone RP11-509D19 from 4, complete sequence Length = 106123 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 atgatgggagacaaccagag 177 |||||||||||||||||||| Sbjct: 20728 atgatgggagacaaccagag 20747
>gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complete sequence Length = 112123 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 catctgggcttcagttgcag 463 |||||||||||||||||||| Sbjct: 20710 catctgggcttcagttgcag 20691
>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome Length = 1471282 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 tccatttcaggctcagctgcccac 417 ||||||||||||||||| |||||| Sbjct: 416165 tccatttcaggctcagcagcccac 416142
>gb|AC008147.31| Homo sapiens 12 BAC RP3-405J10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 115345 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 aaagaagaaacaatggtcac 264 |||||||||||||||||||| Sbjct: 43432 aaagaagaaacaatggtcac 43413
>dbj|AK024933.1| Homo sapiens cDNA: FLJ21280 fis, clone COL01884 Length = 2604 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 aaagaagaaacaatggtcac 264 |||||||||||||||||||| Sbjct: 2178 aaagaagaaacaatggtcac 2197
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 aagaagaaacaatggtcact 265 |||||||||||||||||||| Sbjct: 3750940 aagaagaaacaatggtcact 3750921
>emb|AL133168.6|CNS01DU7 Human chromosome 14 DNA sequence BAC R-187K17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 195115 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 cagaggaagaaaacaaaaga 142 |||||||||||||||||||| Sbjct: 52201 cagaggaagaaaacaaaaga 52220
>emb|AL669851.8| Mouse DNA sequence from clone RP23-18K13 on chromosome X, complete sequence Length = 204557 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 agaggaagaaaacaaaagag 143 |||||||||||||||||||| Sbjct: 22475 agaggaagaaaacaaaagag 22494 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,694,495 Number of Sequences: 3902068 Number of extensions: 6694495 Number of successful extensions: 137156 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 136727 Number of HSP's gapped (non-prelim): 418 length of query: 706 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 683 effective length of database: 17,143,297,704 effective search space: 11708872331832 effective search space used: 11708872331832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
