| Clone Name | rbags20g12 |
|---|---|
| Clone Library Name | barley_pub |
>MTMR1_MOUSE (Q9Z2C4) Myotubularin-related protein 1 (EC 3.1.3.-)| Length = 669 Score = 28.5 bits (62), Expect(2) = 2.4 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -3 Query: 423 ATGTDMSNHYCWP-VEVVLDKLYNVVVDAVTCKKIKEIVYPLV 298 A G N +P E++ +++N+ V + +K+KEIVYP + Sbjct: 357 AKGGGYENESAYPNAELIFLEIHNIHVMRESLRKLKEIVYPSI 399 Score = 21.6 bits (44), Expect(2) = 2.4 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = -1 Query: 221 IIISIA*YWSVMSQISIGSRGALVFFYFLL-GCTSCVPFTWFSFHHRF 81 ++I + W SQ++ + L +Y + G + + W SF HRF Sbjct: 438 VVIHCSDGWDRTSQLTSLAMLMLDSYYRTIKGFEALIEKEWISFGHRF 485
>HYPA_CLOPE (Q46205) Protein hypA| Length = 973 Score = 31.2 bits (69), Expect = 3.1 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 5/68 (7%) Frame = -3 Query: 648 DMPNSLFQGMVEIGRMFY-PEKPPPFLVSQHASHTLQQRMIINDTYALDYIYRKY----K 484 ++PN ++ VE + +Y P FL T ++ IN+ Y ++ Y++ K Sbjct: 203 EIPNLTYEEFVEFHKKYYHPSNSYIFLYGN--GDTEKELEFINEEYLKNFEYKEIDSEIK 260 Query: 483 EEKSFESM 460 E+KSFESM Sbjct: 261 EQKSFESM 268
>ZP4_FELCA (P48834) Zona pellucida sperm-binding protein 4 precursor (Zona| pellucida sperm-binding protein B) Length = 570 Score = 30.4 bits (67), Expect = 5.2 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Frame = -3 Query: 585 PPPFLVSQHASHTLQQRMIINDTYALDYIYRKYKEEKSFESMVQVNISCK-APPPATGTD 409 PPP L +QH TL+ ++ + Y Y Y K + V +S + P+ G Sbjct: 339 PPPHLKTQHGPLTLELKIAKDKHYGSYYTIGDYPVVKLLRDPIYVEVSIRHRTDPSLG-- 396 Query: 408 MSNHYCW 388 + H CW Sbjct: 397 LLLHNCW 403
>SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor| Length = 263 Score = 30.0 bits (66), Expect = 6.9 Identities = 10/33 (30%), Positives = 17/33 (51%) Frame = +3 Query: 399 GCSCQCPSLEAVPCRRCLPAPSIRNSSPLCTSC 497 GC C CP+ PC+ +P + ++ T+C Sbjct: 23 GCDCGCPTTSPKPCQTTVPTCAPTTTTTTTTTC 55
>T2R49_PANTR (Q646C2) Taste receptor type 2 member 49 (T2R49)| Length = 309 Score = 29.6 bits (65), Expect = 9.0 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = -1 Query: 263 WVLLVNNL*ARHLYIIISIA*YWSVMSQISIGSRGALVFFYFLLGCTSCVPFTWFSFHH 87 W V N + +L +II I+ W+V + SI +L FY L V F+ FHH Sbjct: 66 WYSTVLNPTSSNLKVIIFISNAWAVTNHFSIWLATSLSIFYLL----KIVNFSRLIFHH 120
>T2R49_PANPA (Q646E3) Taste receptor type 2 member 49 (T2R49)| Length = 309 Score = 29.6 bits (65), Expect = 9.0 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = -1 Query: 263 WVLLVNNL*ARHLYIIISIA*YWSVMSQISIGSRGALVFFYFLLGCTSCVPFTWFSFHH 87 W V N + +L +II I+ W+V + SI +L FY L V F+ FHH Sbjct: 66 WYSTVLNPTSSNLKVIIFISNAWAVTNHFSIWLATSLSIFYLL----KIVNFSRLIFHH 120
>T2R49_HUMAN (P59543) Taste receptor type 2 member 49 (T2R49) (T2R56)| Length = 309 Score = 29.6 bits (65), Expect = 9.0 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = -1 Query: 263 WVLLVNNL*ARHLYIIISIA*YWSVMSQISIGSRGALVFFYFLLGCTSCVPFTWFSFHH 87 W V N + +L +II I+ W+V + SI +L FY L V F+ FHH Sbjct: 66 WYSTVLNPTSSNLKVIIFISNAWAVTNHFSIWLATSLSIFYLL----KIVNFSRLIFHH 120 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,487,771 Number of Sequences: 219361 Number of extensions: 1737926 Number of successful extensions: 5011 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4776 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4999 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)