ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107345.1| Zea mays PCO104090 mRNA sequence 281 2e-72
2ref|XM_480466.1| Oryza sativa (japonica cultivar-group), mRNA 280 6e-72
3dbj|AK072804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 6e-72
4ref|XM_473964.1| Oryza sativa (japonica cultivar-group), predic... 202 1e-48
5dbj|AK120834.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 1e-48
6gb|BT009299.1| Triticum aestivum clone wlm1.pk0008.c11:fis, full... 180 4e-42
7gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, gen... 151 4e-33
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 141 4e-30
9dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic D... 141 4e-30
10dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic D... 141 4e-30
11emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 135 2e-28
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
13gb|BT018319.1| Zea mays clone EL01T0208A09.c mRNA sequence 123 8e-25
14gb|AY109460.1| Zea mays CL862_1 mRNA sequence 107 5e-20
15gb|AY306178.1| Papaver somniferum FRUITFULL-like MADS-box (PapsF... 46 0.15
16gb|AY306175.1| Papaver nudicaule FRUITFULL-like MADS-box (PapnFL... 46 0.15
17emb|AJ292768.1|NPL292768 Nicotiana plumbaginifolia partial mRNA ... 46 0.15
18gb|AC158191.2| Selaginella moellendorffii clone JGIASXY-5N22, co... 44 0.61
19ref|XM_466313.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.4
20ref|NM_195906.1| Oryza sativa (japonica cultivar-group) putative... 42 2.4
21gb|DP000017.1| Sus scrofa target 1 genomic scaffold 42 2.4
22gb|AC129700.8| Rattus norvegicus 4 BAC CH230-10L17 (Children's H... 42 2.4
23gb|AC127546.4| Mus musculus BAC clone RP24-485N8 from chromosome... 42 2.4
24ref|XM_659079.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 2.4
25gb|DQ172837.1| Xenopus laevis tumorhead-B mRNA, complete cds 42 2.4
26gb|AC146876.3| Rattus norvegicus strain Brown Norway clone CH230... 42 2.4
27gb|AC116458.9| Mus musculus chromosome 16, clone RP23-11L14, com... 42 2.4
28emb|AJ971476.1| Xenopus laevis mRNA for forkhead box transcripti... 42 2.4
29emb|AJ971475.1| Xenopus laevis mRNA for forkhead box transcripti... 42 2.4
30emb|BX571739.9| Zebrafish DNA sequence from clone DKEYP-75C7 in ... 42 2.4
31gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, co... 42 2.4
32gb|AC068867.9| Homo sapiens chromosome 15, clone RP11-702M1, com... 42 2.4
33gb|AC090815.3| Homo sapiens chromosome 15, clone RP11-1078O1, co... 42 2.4
34gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nippon... 42 2.4
35gb|AF288221.1|AF288221 Mus musculus LALP1 mRNA, complete cds 42 2.4
36dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
38gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 42 2.4
39dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
40dbj|AK110474.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
41gb|AC153102.3| Sus scrofa clone RP44-33N10, complete sequence 42 2.4
42gb|AC154591.2| Mus musculus BAC clone RP23-370M19 from 16, compl... 42 2.4
43dbj|AK060161.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
44gb|AY107267.1| Zea mays PCO073795 mRNA sequence 42 2.4
45gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
46ref|NM_118834.2| Arabidopsis thaliana RNA binding AT4G27000 mRNA... 40 9.6
47ref|XM_641913.1| Dictyostelium discoideum putative protein tyros... 40 9.6
48ref|XM_508013.1| PREDICTED: Pan troglodytes similar to KIAA0185 ... 40 9.6
49ref|NM_184951.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.6
50gb|BC052268.1| Homo sapiens TAF5 RNA polymerase II, TATA box bin... 40 9.6
51gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.6
52gb|AC166164.2| Mus musculus BAC clone RP23-394K2 from chromosome... 40 9.6
53gb|AC154581.2| Mus musculus BAC clone RP23-381G5 from chromosome... 40 9.6
54gb|AC093476.6| Mus musculus chromosome 6, clone RP23-55C15, comp... 40 9.6
55ref|XM_715244.1| Candida albicans SC5314 protein kinase (RIM15) ... 40 9.6
56ref|XM_448710.1| Candida glabrata CBS138, CAGL0K11374g partial mRNA 40 9.6
57emb|Z82279.2|CER03C1 Caenorhabditis elegans Cosmid R03C1, comple... 40 9.6
58gb|AC131711.3| Mus musculus BAC clone RP23-192M18 from 6, comple... 40 9.6
59ref|XM_883612.1| Candida albicans SC5314 hypothetical protein (C... 40 9.6
60gb|AY232273.1| Dictyostelium discoideum putative protein Roco11 ... 40 9.6
61ref|NM_006951.3| Homo sapiens TAF5 RNA polymerase II, TATA box b... 40 9.6
62emb|AL591408.19| Human DNA sequence from clone RP11-792D24 on ch... 40 9.6
63emb|X95525.1|HSTAFII10 H.sapiens mRNA for TAFII100 protein 40 9.6
64gb|AY062999.1| Arabidopsis thaliana putative DNA binding protein... 40 9.6
65gb|AF370339.1| Arabidopsis thaliana putative DNA binding protein... 40 9.6
66emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 40 9.6
67gb|AC132058.5| Rattus norvegicus 18 BAC CH230-229M9 (Children's ... 40 9.6
68emb|AL596129.27| Mouse DNA sequence from clone RP23-294E23 on ch... 40 9.6
69emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, ... 40 9.6
70emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, B... 40 9.6
71gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 9.6
72gb|AY093292.1| Arabidopsis thaliana putative DNA binding protein... 40 9.6
73dbj|AK013294.1| Mus musculus 10, 11 days embryo whole body cDNA,... 40 9.6
74dbj|AK132018.1| Mus musculus 10, 11 days embryo whole body cDNA,... 40 9.6
75dbj|AK153696.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 9.6
76dbj|AK221951.1| Arabidopsis thaliana mRNA for putative DNA bindi... 40 9.6
77dbj|AB179107.1| Macaca fascicularis testis cDNA clone: QtsA-1297... 40 9.6
78gb|AY054487.1| Arabidopsis thaliana putative DNA binding protein... 40 9.6
79gb|U97549.1| Caenorhabditis elegans cosmid F15A8, complete sequence 40 9.6
80gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome... 40 9.6
81gb|AC156447.2| Volvox carteri clone JGIAOBO-33C7, complete sequence 40 9.6
82dbj|AK037593.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 9.6
83emb|BX470087.8| Zebrafish DNA sequence from clone CH211-202A10 i... 40 9.6
84dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
85gb|AC074136.4| Homo sapiens chromosome 16 clone CTD-2318B16, com... 40 9.6
86gb|AC125490.5| Homo sapiens BAC clone RP11-710I20 from 2, comple... 40 9.6
87dbj|AK223615.1| Homo sapiens mRNA for Transcription initiation f... 40 9.6
88gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B... 40 9.6
89gb|AC007595.9| Homo sapiens chromosome 16 clone RP11-109M19, com... 40 9.6
90gb|AC127894.6| Homo sapiens 12 BAC RP11-324P9 (Roswell Park Canc... 40 9.6
91ref|XM_219965.3| PREDICTED: Rattus norvegicus TAF5 RNA polymeras... 40 9.6
92ref|NM_001033405.1| Mus musculus triggering receptor expressed o... 40 9.6
93dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
94emb|X69977.1|XLXPGAA X.laevis mRNA for XP-G related factor 40 9.6
95dbj|AK101593.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.6
96gb|AF191743.1|AF191743 Crypthecodinium cohnii strain ATTC50050 D... 40 9.6
97dbj|AK063783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.6
98gb|DQ341272.1| Mus musculus trem-like transcript 2 (Tlt2) mRNA, ... 40 9.6
99gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 9.6
100gb|AC079682.29| Mus musculus strain C57BL/6J chromosome 3 clone ... 40 9.6
101gb|U80191.1|HSU80191 Human TFIID subunit TAFII100 mRNA, complete... 40 9.6
102gb|U75309.1|HSU75309 Human TBP-associated factor (hTAFII100) mRN... 40 9.6
103emb|CT009754.11| Mouse DNA sequence from clone RP23-5P19 on chro... 40 9.6
104dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, comp... 40 9.6
105dbj|AP006127.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 9.6
106dbj|AP004625.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 9.6
107emb|AL670260.10| Mouse DNA sequence from clone RP23-1I17 on chro... 40 9.6 
>gb|AY107345.1| Zea mays PCO104090 mRNA sequence
          Length = 999

 Score =  281 bits (142), Expect = 2e-72
 Identities = 250/286 (87%)
 Strand = Plus / Minus

                                                                       
Query: 370 ctgaacttgtttgtttgaagggctccgaccccatgaaagcctcacattctgcccttcaat 429
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| 
Sbjct: 526 ctgaacttgtttgtttgaagggctgcgaccccatgaaagcctcacattctgccctccaac 467

                                                                       
Query: 430 catggtaccttgcagcattagcagggcttcctctgcggaggatctgctagcatattgaac 489
           || ||| |||||||| |||| ||  || |||||||| || |||||| |||||||||||||
Sbjct: 466 caaggtgccttgcagaattaccaatgcctcctctgccgaagatctgttagcatattgaac 407

                                                                       
Query: 490 aaaaccacatcttttgccaacaggtatcttaacatggaccacttctccgtacggagtgaa 549
           |||||||||||||||||||||||| |||||||||||||| || || || || || |||||
Sbjct: 406 aaaaccacatcttttgccaacaggaatcttaacatggactacgtccccataaggggtgaa 347

                                                                       
Query: 550 aacttgttttaacacatcctcagtggcgctcgggtcaaggccaccaacaaatatggtgga 609
           ||||||||| |||| ||| |||||| |  | |||||||| ||||||||||| ||||| | 
Sbjct: 346 aacttgtttcaacatatcttcagtgacattggggtcaagaccaccaacaaaaatggttgt 287

                                                         
Query: 610 attgctaggatcattgtcagtctgaatcccctgagcagttggtact 655
           |||| ||||||||||||||| |||||  ||||||||| ||||||||
Sbjct: 286 attgttaggatcattgtcagactgaactccctgagcacttggtact 241
to top
>ref|XM_480466.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1284

 Score =  280 bits (141), Expect = 6e-72
 Identities = 281/327 (85%), Gaps = 3/327 (0%)
 Strand = Plus / Minus

                                                                        
Query: 370  ctgaacttgtttgtttgaagggctccgaccccatgaaagcctcacattctgcccttcaat 429
            |||| ||||| | ||||||||||| || ||||||||||||||||||||||| ||| ||||
Sbjct: 1104 ctgagcttgtctatttgaagggctgcggccccatgaaagcctcacattctgtcctccaat 1045

                                                                        
Query: 430  catggtaccttgcagcattagcagggcttcctctgcggaggatctgctagcatattgaac 489
            || ||||||||| || | || ||  ||||| ||||| || | |||| ||||| |||||||
Sbjct: 1044 caaggtaccttgtagaagtaccaaagcttcatctgcagaagctctgttagcaaattgaac 985

                                                                        
Query: 490  aaaaccacatcttttgccaacaggtatcttaacatggaccacttctccgtacggagtgaa 549
            ||||||||||||||| ||||| || ||||||||||||||||| ||||| || ||||||||
Sbjct: 984  aaaaccacatctttttccaactgggatcttaacatggaccacatctccatagggagtgaa 925

                                                                        
Query: 550  aacttgttttaacacatcctcagtggcgctcgggtcaaggccaccaacaaatatggtgga 609
            ||||||||| |||| ||| |||||| | || || |||||||||||||||||||| |||| 
Sbjct: 924  aacttgtttcaacatatcgtcagtgacactgggatcaaggccaccaacaaatatagtggt 865

                                                                        
Query: 610  attgctaggatcattgtcagtctgaatcccctgagcagttggtactttctcttgaactcc 669
            ||||||||||||| |||||| |||||  || |||||| | ||||||||||||||||||||
Sbjct: 864  attgctaggatcactgtcagactgaactccttgagcactcggtactttctcttgaactcc 805

                                       
Query: 670  atttgctttttgcttatttgcagctgg 696
            | |||||||   |||||||||||||||
Sbjct: 804  agttgcttt---cttatttgcagctgg 781



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 254  ccatacccatacatgtttgggtcctgaggttaagca 289
            |||||||| ||||| || ||||||||||||| ||||
Sbjct: 1220 ccatacccgtacatattagggtcctgaggttgagca 1185
to top
>dbj|AK072804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135B10, full
            insert sequence
          Length = 1693

 Score =  280 bits (141), Expect = 6e-72
 Identities = 281/327 (85%), Gaps = 3/327 (0%)
 Strand = Plus / Minus

                                                                        
Query: 370  ctgaacttgtttgtttgaagggctccgaccccatgaaagcctcacattctgcccttcaat 429
            |||| ||||| | ||||||||||| || ||||||||||||||||||||||| ||| ||||
Sbjct: 1256 ctgagcttgtctatttgaagggctgcggccccatgaaagcctcacattctgtcctccaat 1197

                                                                        
Query: 430  catggtaccttgcagcattagcagggcttcctctgcggaggatctgctagcatattgaac 489
            || ||||||||| || | || ||  ||||| ||||| || | |||| ||||| |||||||
Sbjct: 1196 caaggtaccttgtagaagtaccaaagcttcatctgcagaagctctgttagcaaattgaac 1137

                                                                        
Query: 490  aaaaccacatcttttgccaacaggtatcttaacatggaccacttctccgtacggagtgaa 549
            ||||||||||||||| ||||| || ||||||||||||||||| ||||| || ||||||||
Sbjct: 1136 aaaaccacatctttttccaactgggatcttaacatggaccacatctccatagggagtgaa 1077

                                                                        
Query: 550  aacttgttttaacacatcctcagtggcgctcgggtcaaggccaccaacaaatatggtgga 609
            ||||||||| |||| ||| |||||| | || || |||||||||||||||||||| |||| 
Sbjct: 1076 aacttgtttcaacatatcgtcagtgacactgggatcaaggccaccaacaaatatagtggt 1017

                                                                        
Query: 610  attgctaggatcattgtcagtctgaatcccctgagcagttggtactttctcttgaactcc 669
            ||||||||||||| |||||| |||||  || |||||| | ||||||||||||||||||||
Sbjct: 1016 attgctaggatcactgtcagactgaactccttgagcactcggtactttctcttgaactcc 957

                                       
Query: 670  atttgctttttgcttatttgcagctgg 696
            | |||||||   |||||||||||||||
Sbjct: 956  agttgcttt---cttatttgcagctgg 933



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 254  ccatacccatacatgtttgggtcctgaggttaagca 289
            |||||||| ||||| || ||||||||||||| ||||
Sbjct: 1372 ccatacccgtacatattagggtcctgaggttgagca 1337
to top
>ref|XM_473964.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1245

 Score =  202 bits (102), Expect = 1e-48
 Identities = 243/290 (83%)
 Strand = Plus / Minus

                                                                        
Query: 377  tgtttgtttgaagggctccgaccccatgaaagcctcacattctgcccttcaatcatggta 436
            |||||||||||| |||| |||||||| ||||| || |||||||||||  |||||| ||| 
Sbjct: 1049 tgtttgtttgaaaggcttcgaccccacgaaagtctaacattctgcccaccaatcaaggtc 990

                                                                        
Query: 437  ccttgcagcattagcagggcttcctctgcggaggatctgctagcatattgaacaaaacca 496
            ||||| |||| |  ||| |||| ||| || || |  ||| || |||||||||||||||||
Sbjct: 989  ccttgtagcactgccagtgcttgctcagcagaaggcctgttaacatattgaacaaaacca 930

                                                                        
Query: 497  catcttttgccaacaggtatcttaacatggaccacttctccgtacggagtgaaaacttgt 556
            |||||||| |||||||| |||||||||||||| |||||||| || |||| ||||||||||
Sbjct: 929  catcttttcccaacaggaatcttaacatggacaacttctccataaggagcgaaaacttgt 870

                                                                        
Query: 557  tttaacacatcctcagtggcgctcgggtcaaggccaccaacaaatatggtggaattgcta 616
            || || ||||| |||||| || | |||||||| |||||||| |||||||||| |||| ||
Sbjct: 869  ttcaagacatcttcagtgacgttggggtcaagaccaccaacgaatatggtggtattgtta 810

                                                              
Query: 617  ggatcattgtcagtctgaatcccctgagcagttggtactttctcttgaac 666
            |||||||| |||| ||||   || |||||| |||||||| |||| |||||
Sbjct: 809  ggatcattctcagactgagctccttgagcatttggtactctctcctgaac 760



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 211  tgctacttgttgctgtggatagtttgggtagctagcatatgtcccatacccatacatgtt 270
            |||||||||||||||| | || || || || | |||||| |  ||||| |||||||||||
Sbjct: 1221 tgctacttgttgctgttggtaattgggataaccagcataggctccataaccatacatgtt 1162

                          
Query: 271  tgggtcctgaggtt 284
             || ||||||||||
Sbjct: 1161 aggatcctgaggtt 1148
to top
>dbj|AK120834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019P13, full
            insert sequence
          Length = 1599

 Score =  202 bits (102), Expect = 1e-48
 Identities = 243/290 (83%)
 Strand = Plus / Minus

                                                                        
Query: 377  tgtttgtttgaagggctccgaccccatgaaagcctcacattctgcccttcaatcatggta 436
            |||||||||||| |||| |||||||| ||||| || |||||||||||  |||||| ||| 
Sbjct: 1143 tgtttgtttgaaaggcttcgaccccacgaaagtctaacattctgcccaccaatcaaggtc 1084

                                                                        
Query: 437  ccttgcagcattagcagggcttcctctgcggaggatctgctagcatattgaacaaaacca 496
            ||||| |||| |  ||| |||| ||| || || |  ||| || |||||||||||||||||
Sbjct: 1083 ccttgtagcactgccagtgcttgctcagcagaaggcctgttaacatattgaacaaaacca 1024

                                                                        
Query: 497  catcttttgccaacaggtatcttaacatggaccacttctccgtacggagtgaaaacttgt 556
            |||||||| |||||||| |||||||||||||| |||||||| || |||| ||||||||||
Sbjct: 1023 catcttttcccaacaggaatcttaacatggacaacttctccataaggagcgaaaacttgt 964

                                                                        
Query: 557  tttaacacatcctcagtggcgctcgggtcaaggccaccaacaaatatggtggaattgcta 616
            || || ||||| |||||| || | |||||||| |||||||| |||||||||| |||| ||
Sbjct: 963  ttcaagacatcttcagtgacgttggggtcaagaccaccaacgaatatggtggtattgtta 904

                                                              
Query: 617  ggatcattgtcagtctgaatcccctgagcagttggtactttctcttgaac 666
            |||||||| |||| ||||   || |||||| |||||||| |||| |||||
Sbjct: 903  ggatcattctcagactgagctccttgagcatttggtactctctcctgaac 854



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 211  tgctacttgttgctgtggatagtttgggtagctagcatatgtcccatacccatacatgtt 270
            |||||||||||||||| | || || || || | |||||| |  ||||| |||||||||||
Sbjct: 1315 tgctacttgttgctgttggtaattgggataaccagcataggctccataaccatacatgtt 1256

                          
Query: 271  tgggtcctgaggtt 284
             || ||||||||||
Sbjct: 1255 aggatcctgaggtt 1242
to top
>gb|BT009299.1| Triticum aestivum clone wlm1.pk0008.c11:fis, full insert mRNA
           sequence
          Length = 1344

 Score =  180 bits (91), Expect = 4e-42
 Identities = 217/259 (83%)
 Strand = Plus / Minus

                                                                       
Query: 376 ttgtttgtttgaagggctccgaccccatgaaagcctcacattctgcccttcaatcatggt 435
           |||||||||||||||||| || ||||||||||||||||||||||| ||  ||| || |||
Sbjct: 729 ttgtttgtttgaagggcttcgtccccatgaaagcctcacattctgaccaccaaccaaggt 670

                                                                       
Query: 436 accttgcagcattagcagggcttcctctgcggaggatctgctagcatattgaacaaaacc 495
            |||||||||| | |||| |||| ||| || || |  ||| ||||||| |||||||| ||
Sbjct: 669 cccttgcagcaattgcagagcttgctcagcagaaggcctgttagcatactgaacaaagcc 610

                                                                       
Query: 496 acatcttttgccaacaggtatcttaacatggaccacttctccgtacggagtgaaaacttg 555
           |||||| || |||||||| ||||| |||||||| ||||| || || ||||  || |||||
Sbjct: 609 acatctcttcccaacagggatcttgacatggacaacttccccatatggagcaaacacttg 550

                                                                       
Query: 556 ttttaacacatcctcagtggcgctcgggtcaaggccaccaacaaatatggtggaattgct 615
           ||| ||  |||| |||||| |  | |||||||||||||||||||||||||||| |||| |
Sbjct: 549 tttcaaggcatcttcagtgacattggggtcaaggccaccaacaaatatggtggtattgtt 490

                              
Query: 616 aggatcattgtcagtctga 634
           |||||||||||||| ||||
Sbjct: 489 aggatcattgtcagactga 471
to top
>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence
          Length = 64224

 Score =  151 bits (76), Expect = 4e-33
 Identities = 112/124 (90%)
 Strand = Plus / Minus

                                                                         
Query: 480   catattgaacaaaaccacatcttttgccaacaggtatcttaacatggaccacttctccgt 539
             ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |
Sbjct: 23331 catattgaacaaaaccacatcttttcccaacaggaatcttaacatggacaacttctccat 23272

                                                                         
Query: 540   acggagtgaaaacttgttttaacacatcctcagtggcgctcgggtcaaggccaccaacaa 599
             | |||| |||||||||||| || ||||| |||||| |||| ||||||||||||||||| |
Sbjct: 23271 aaggagcgaaaacttgtttcaagacatcttcagtgacgctggggtcaaggccaccaacga 23212

                 
Query: 600   atat 603
             ||||
Sbjct: 23211 atat 23208



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                         
Query: 377   tgtttgtttgaagggctccgaccccatgaaagcctcacattctgcccttcaatcatggta 436
             |||||||||||| |||| |||||||||||||| || |||||||||||  |||||| ||| 
Sbjct: 23540 tgtttgtttgaaaggcttcgaccccatgaaagtctaacattctgcccaccaatcaaggtc 23481

                       
Query: 437   ccttgcagca 446
             ||||| ||||
Sbjct: 23480 ccttgtagca 23471
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  141 bits (71), Expect = 4e-30
 Identities = 113/127 (88%)
 Strand = Plus / Plus

                                                                           
Query: 477     tagcatattgaacaaaaccacatcttttgccaacaggtatcttaacatggaccacttctc 536
               ||||| |||||||||||||||||||||| ||||| || ||||||||||||||||| ||||
Sbjct: 5263054 tagcaaattgaacaaaaccacatctttttccaactgggatcttaacatggaccacatctc 5263113

                                                                           
Query: 537     cgtacggagtgaaaacttgttttaacacatcctcagtggcgctcgggtcaaggccaccaa 596
               | || ||||||||||||||||| |||| ||| |||||| | || || |||||||||||||
Sbjct: 5263114 catagggagtgaaaacttgtttcaacatatcgtcagtgacactgggatcaaggccaccaa 5263173

                      
Query: 597     caaatat 603
               |||||||
Sbjct: 5263174 caaatat 5263180



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                           
Query: 369     cctgaacttgtttgtttgaagggctccgaccccatgaaagcctcacattctgcccttcaa 428
               ||||| ||||| | ||||||||||| || ||||||||||||||||||||||| ||| |||
Sbjct: 5262849 cctgagcttgtctatttgaagggctgcggccccatgaaagcctcacattctgtcctccaa 5262908

                            
Query: 429     tcatggtaccttg 441
               ||| |||||||||
Sbjct: 5262909 tcaaggtaccttg 5262921



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 39/43 (90%), Gaps = 3/43 (6%)
 Strand = Plus / Plus

                                                          
Query: 654     ctttctcttgaactccatttgctttttgcttatttgcagctgg 696
               ||||||||||||||||| |||||||   |||||||||||||||
Sbjct: 5265266 ctttctcttgaactccagttgcttt---cttatttgcagctgg 5265305



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 340     agcagtagcaccaccccactggttg 364
               |||| ||||||||||||||||||||
Sbjct: 5262735 agcattagcaccaccccactggttg 5262759



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 254     ccatacccatacatgtttgggtcctgaggttaagca 289
               |||||||| ||||| || ||||||||||||| ||||
Sbjct: 5262658 ccatacccgtacatattagggtcctgaggttgagca 5262693
to top
>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1099H05
          Length = 186036

 Score =  141 bits (71), Expect = 4e-30
 Identities = 113/127 (88%)
 Strand = Plus / Plus

                                                                          
Query: 477    tagcatattgaacaaaaccacatcttttgccaacaggtatcttaacatggaccacttctc 536
              ||||| |||||||||||||||||||||| ||||| || ||||||||||||||||| ||||
Sbjct: 131410 tagcaaattgaacaaaaccacatctttttccaactgggatcttaacatggaccacatctc 131469

                                                                          
Query: 537    cgtacggagtgaaaacttgttttaacacatcctcagtggcgctcgggtcaaggccaccaa 596
              | || ||||||||||||||||| |||| ||| |||||| | || || |||||||||||||
Sbjct: 131470 catagggagtgaaaacttgtttcaacatatcgtcagtgacactgggatcaaggccaccaa 131529

                     
Query: 597    caaatat 603
              |||||||
Sbjct: 131530 caaatat 131536



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                          
Query: 369    cctgaacttgtttgtttgaagggctccgaccccatgaaagcctcacattctgcccttcaa 428
              ||||| ||||| | ||||||||||| || ||||||||||||||||||||||| ||| |||
Sbjct: 131205 cctgagcttgtctatttgaagggctgcggccccatgaaagcctcacattctgtcctccaa 131264

                           
Query: 429    tcatggtaccttg 441
              ||| |||||||||
Sbjct: 131265 tcaaggtaccttg 131277



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 39/43 (90%), Gaps = 3/43 (6%)
 Strand = Plus / Plus

                                                         
Query: 654    ctttctcttgaactccatttgctttttgcttatttgcagctgg 696
              ||||||||||||||||| |||||||   |||||||||||||||
Sbjct: 133622 ctttctcttgaactccagttgcttt---cttatttgcagctgg 133661



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 340    agcagtagcaccaccccactggttg 364
              |||| ||||||||||||||||||||
Sbjct: 131091 agcattagcaccaccccactggttg 131115



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 254    ccatacccatacatgtttgggtcctgaggttaagca 289
              |||||||| ||||| || ||||||||||||| ||||
Sbjct: 131014 ccatacccgtacatattagggtcctgaggttgagca 131049
to top
>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0610E02
          Length = 135816

 Score =  141 bits (71), Expect = 4e-30
 Identities = 113/127 (88%)
 Strand = Plus / Plus

                                                                         
Query: 477   tagcatattgaacaaaaccacatcttttgccaacaggtatcttaacatggaccacttctc 536
             ||||| |||||||||||||||||||||| ||||| || ||||||||||||||||| ||||
Sbjct: 54642 tagcaaattgaacaaaaccacatctttttccaactgggatcttaacatggaccacatctc 54701

                                                                         
Query: 537   cgtacggagtgaaaacttgttttaacacatcctcagtggcgctcgggtcaaggccaccaa 596
             | || ||||||||||||||||| |||| ||| |||||| | || || |||||||||||||
Sbjct: 54702 catagggagtgaaaacttgtttcaacatatcgtcagtgacactgggatcaaggccaccaa 54761

                    
Query: 597   caaatat 603
             |||||||
Sbjct: 54762 caaatat 54768



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                         
Query: 369   cctgaacttgtttgtttgaagggctccgaccccatgaaagcctcacattctgcccttcaa 428
             ||||| ||||| | ||||||||||| || ||||||||||||||||||||||| ||| |||
Sbjct: 54437 cctgagcttgtctatttgaagggctgcggccccatgaaagcctcacattctgtcctccaa 54496

                          
Query: 429   tcatggtaccttg 441
             ||| |||||||||
Sbjct: 54497 tcaaggtaccttg 54509



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 39/43 (90%), Gaps = 3/43 (6%)
 Strand = Plus / Plus

                                                        
Query: 654   ctttctcttgaactccatttgctttttgcttatttgcagctgg 696
             ||||||||||||||||| |||||||   |||||||||||||||
Sbjct: 56854 ctttctcttgaactccagttgcttt---cttatttgcagctgg 56893



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 340   agcagtagcaccaccccactggttg 364
             |||| ||||||||||||||||||||
Sbjct: 54323 agcattagcaccaccccactggttg 54347



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 254   ccatacccatacatgtttgggtcctgaggttaagca 289
             |||||||| ||||| || ||||||||||||| ||||
Sbjct: 54246 ccatacccgtacatattagggtcctgaggttgagca 54281
to top
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
             complete sequence
          Length = 166951

 Score =  135 bits (68), Expect = 2e-28
 Identities = 110/124 (88%)
 Strand = Plus / Minus

                                                                         
Query: 480   catattgaacaaaaccacatcttttgccaacaggtatcttaacatggaccacttctccgt 539
             ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |
Sbjct: 29322 catattgaacaaaaccacatcttttcccaacaggaatcttaacatggacaacttctccat 29263

                                                                         
Query: 540   acggagtgaaaacttgttttaacacatcctcagtggcgctcgggtcaaggccaccaacaa 599
             | |||| |||||||||||| || ||||| |||||| || | |||||||| |||||||| |
Sbjct: 29262 aaggagcgaaaacttgtttcaagacatcttcagtgacgttggggtcaagaccaccaacga 29203

                 
Query: 600   atat 603
             ||||
Sbjct: 29202 atat 29199



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                         
Query: 377   tgtttgtttgaagggctccgaccccatgaaagcctcacattctgcccttcaatcatggta 436
             |||||||||||| |||| |||||||| ||||| || |||||||||||  |||||| ||| 
Sbjct: 29530 tgtttgtttgaaaggcttcgaccccacgaaagtctaacattctgcccaccaatcaaggtc 29471

                       
Query: 437   ccttgcagca 446
             ||||| ||||
Sbjct: 29470 ccttgtagca 29461



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                         
Query: 211   tgctacttgttgctgtggatagtttgggtagctagcatatgtcccatacccatacatgtt 270
             |||||||||||||||| | || || || || | |||||| |  ||||| |||||||||||
Sbjct: 29795 tgctacttgttgctgttggtaattgggataaccagcataggctccataaccatacatgtt 29736

                           
Query: 271   tgggtcctgaggtt 284
              || ||||||||||
Sbjct: 29735 aggatcctgaggtt 29722
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  135 bits (68), Expect = 2e-28
 Identities = 110/124 (88%)
 Strand = Plus / Minus

                                                                            
Query: 480      catattgaacaaaaccacatcttttgccaacaggtatcttaacatggaccacttctccgt 539
                ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |
Sbjct: 31856456 catattgaacaaaaccacatcttttcccaacaggaatcttaacatggacaacttctccat 31856397

                                                                            
Query: 540      acggagtgaaaacttgttttaacacatcctcagtggcgctcgggtcaaggccaccaacaa 599
                | |||| |||||||||||| || ||||| |||||| || | |||||||| |||||||| |
Sbjct: 31856396 aaggagcgaaaacttgtttcaagacatcttcagtgacgttggggtcaagaccaccaacga 31856337

                    
Query: 600      atat 603
                ||||
Sbjct: 31856336 atat 31856333



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                            
Query: 377      tgtttgtttgaagggctccgaccccatgaaagcctcacattctgcccttcaatcatggta 436
                |||||||||||| |||| |||||||| ||||| || |||||||||||  |||||| ||| 
Sbjct: 31856664 tgtttgtttgaaaggcttcgaccccacgaaagtctaacattctgcccaccaatcaaggtc 31856605

                          
Query: 437      ccttgcagca 446
                ||||| ||||
Sbjct: 31856604 ccttgtagca 31856595



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                            
Query: 211      tgctacttgttgctgtggatagtttgggtagctagcatatgtcccatacccatacatgtt 270
                |||||||||||||||| | || || || || | |||||| |  ||||| |||||||||||
Sbjct: 31856929 tgctacttgttgctgttggtaattgggataaccagcataggctccataaccatacatgtt 31856870

                              
Query: 271      tgggtcctgaggtt 284
                 || ||||||||||
Sbjct: 31856869 aggatcctgaggtt 31856856
to top
>gb|BT018319.1| Zea mays clone EL01T0208A09.c mRNA sequence
          Length = 1019

 Score =  123 bits (62), Expect = 8e-25
 Identities = 152/182 (83%)
 Strand = Plus / Minus

                                                                       
Query: 485 tgaacaaaaccacatcttttgccaacaggtatcttaacatggaccacttctccgtacgga 544
           ||||||||||||||||| || |||||||| |||||||||||||| ||||| ||||| |||
Sbjct: 392 tgaacaaaaccacatctcttcccaacagggatcttaacatggacgacttcaccgtaagga 333

                                                                       
Query: 545 gtgaaaacttgttttaacacatcctcagtggcgctcgggtcaaggccaccaacaaatatg 604
           |  |||||||||||||    ||| |||||| |  | |||||||| |||||||||||||| 
Sbjct: 332 gaaaaaacttgttttagggtatcttcagtgacattggggtcaagcccaccaacaaatata 273

                                                                       
Query: 605 gtggaattgctaggatcattgtcagtctgaatcccctgagcagttggtactttctcttga 664
           |||| |||| |||||||||| |||| ||||   || |||| | |||||||| ||||||||
Sbjct: 272 gtggtattgttaggatcattctcagactgagctccttgagaatttggtactctctcttga 213

             
Query: 665 ac 666
           ||
Sbjct: 212 ac 211
to top
>gb|AY109460.1| Zea mays CL862_1 mRNA sequence
          Length = 1796

 Score =  107 bits (54), Expect = 5e-20
 Identities = 150/182 (82%)
 Strand = Plus / Minus

                                                                        
Query: 485  tgaacaaaaccacatcttttgccaacaggtatcttaacatggaccacttctccgtacgga 544
            ||||||||||||||||| || |||||||| |||||||||||||  ||||| || || |||
Sbjct: 1132 tgaacaaaaccacatctcttcccaacagggatcttaacatggatgacttcgccataagga 1073

                                                                        
Query: 545  gtgaaaacttgttttaacacatcctcagtggcgctcgggtcaaggccaccaacaaatatg 604
            |  ||  |||||||||  ||||| |||||| |  | |||||||| |||||||||||||| 
Sbjct: 1072 gaaaatgcttgttttaggacatcttcagtgacattggggtcaagcccaccaacaaatata 1013

                                                                        
Query: 605  gtggaattgctaggatcattgtcagtctgaatcccctgagcagttggtactttctcttga 664
            |||| |||| |||||||||| |||| ||||   || |||| | |||||||| ||||||||
Sbjct: 1012 gtggtattgttaggatcattctcagactgagctccttgagaatttggtactctctcttga 953

              
Query: 665  ac 666
            ||
Sbjct: 952  ac 951
to top
>gb|AY306178.1| Papaver somniferum FRUITFULL-like MADS-box (PapsFL2) mRNA, partial
           cds
          Length = 722

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 196 ctgttgctgctgtgctgctactt 218
           |||||||||||||||||||||||
Sbjct: 537 ctgttgctgctgtgctgctactt 515
to top
>gb|AY306175.1| Papaver nudicaule FRUITFULL-like MADS-box (PapnFL1) mRNA, partial
           cds
          Length = 657

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 196 ctgttgctgctgtgctgctactt 218
           |||||||||||||||||||||||
Sbjct: 453 ctgttgctgctgtgctgctactt 431
to top
>emb|AJ292768.1|NPL292768 Nicotiana plumbaginifolia partial mRNA for RNA Binding Protein 47
            (rbp47 gene)
          Length = 1621

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 483  attgaacaaaaccacatcttttgccaacaggtatcttaacatggaccacttctcc 537
            |||| ||||||||||||| ||| ||| ||||||| || |||  ||||||||||||
Sbjct: 1133 attgtacaaaaccacatccttttccagcaggtattttcacagagaccacttctcc 1079
to top
>gb|AC158191.2| Selaginella moellendorffii clone JGIASXY-5N22, complete sequence
          Length = 30068

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 192   cctgctgttgctgctgtgctgc 213
             ||||||||||||||||||||||
Sbjct: 11833 cctgctgttgctgctgtgctgc 11812
to top
>ref|XM_466313.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1191

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 483 attgaacaaaaccacatcttttgccaacaggtatcttaaca 523
           ||||||||||||||||   |||||||||||| || ||||||
Sbjct: 928 attgaacaaaaccacactgtttgccaacaggaattttaaca 888
to top
>ref|NM_195906.1| Oryza sativa (japonica cultivar-group) putative laccase
           (OSJNBa0045C13.15), mRNA
          Length = 1596

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 189 gttcctgctgttgctgctgtgctgc 213
           |||||||||||||||||||| ||||
Sbjct: 861 gttcctgctgttgctgctgtactgc 837
to top
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold
          Length = 1471440

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 661     ttgaactccatttgctttttg 681
               |||||||||||||||||||||
Sbjct: 1083245 ttgaactccatttgctttttg 1083265
to top
>gb|AC129700.8| Rattus norvegicus 4 BAC CH230-10L17 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 238527

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 664    aactccatttgctttttgctt 684
              |||||||||||||||||||||
Sbjct: 133717 aactccatttgctttttgctt 133737
to top
>gb|AC127546.4| Mus musculus BAC clone RP24-485N8 from chromosome 7, complete sequence
          Length = 151861

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 190   ttcctgctgttgctgctgtgc 210
             |||||||||||||||||||||
Sbjct: 72690 ttcctgctgttgctgctgtgc 72670
to top
>ref|XM_659079.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6567.2), mRNA
          Length = 1713

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 124 ggtgtccatataacatgactg 144
           |||||||||||||||||||||
Sbjct: 338 ggtgtccatataacatgactg 358
to top
>gb|DQ172837.1| Xenopus laevis tumorhead-B mRNA, complete cds
          Length = 2678

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 61   aataaaccaaaaaatgttttg 81
            |||||||||||||||||||||
Sbjct: 1772 aataaaccaaaaaatgttttg 1752
to top
>gb|AC146876.3| Rattus norvegicus strain Brown Norway clone CH230-418B13, complete
             sequence
          Length = 106685

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 664   aactccatttgctttttgctt 684
             |||||||||||||||||||||
Sbjct: 61588 aactccatttgctttttgctt 61608
to top
>gb|AC116458.9| Mus musculus chromosome 16, clone RP23-11L14, complete sequence
          Length = 219241

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 661    ttgaactccatttgctttttgctta 685
              |||||||||||||||||||| ||||
Sbjct: 141044 ttgaactccatttgctttttcctta 141068
to top
>emb|AJ971476.1| Xenopus laevis mRNA for forkhead box transcription factor (foxP2b
           gene)
          Length = 2371

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 201 gctgctgtgctgctacttgttgctg 225
           ||||||||||||||| |||||||||
Sbjct: 536 gctgctgtgctgctaattgttgctg 512
to top
>emb|AJ971475.1| Xenopus laevis mRNA for forkhead box transcription factor (foxP2a
           gene)
          Length = 2641

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 201 gctgctgtgctgctacttgttgctg 225
           ||||||||||||||| |||||||||
Sbjct: 896 gctgctgtgctgctaattgttgctg 872
to top
>emb|BX571739.9| Zebrafish DNA sequence from clone DKEYP-75C7 in linkage group 15,
             complete sequence
          Length = 139312

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 243   tagcatatgtcccatacccatacatgttt 271
             |||||||| ||||| ||||||||||||||
Sbjct: 56772 tagcatatttcccaaacccatacatgttt 56744
to top
>gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, complete sequence
          Length = 175123

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 631   ctgaatcccctgagcagttgg 651
             |||||||||||||||||||||
Sbjct: 68247 ctgaatcccctgagcagttgg 68227
to top
>gb|AC068867.9| Homo sapiens chromosome 15, clone RP11-702M1, complete sequence
          Length = 179455

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 631    ctgaatcccctgagcagttgg 651
              |||||||||||||||||||||
Sbjct: 131453 ctgaatcccctgagcagttgg 131433
to top
>gb|AC090815.3| Homo sapiens chromosome 15, clone RP11-1078O1, complete sequence
          Length = 180352

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 631   ctgaatcccctgagcagttgg 651
             |||||||||||||||||||||
Sbjct: 34209 ctgaatcccctgagcagttgg 34229
to top
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0045C13, from Chromosome 10, complete sequence
          Length = 161250

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 189    gttcctgctgttgctgctgtgctgc 213
              |||||||||||||||||||| ||||
Sbjct: 110408 gttcctgctgttgctgctgtactgc 110432
to top
>gb|AF288221.1|AF288221 Mus musculus LALP1 mRNA, complete cds
          Length = 3268

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 190  ttcctgctgttgctgctgtgc 210
            |||||||||||||||||||||
Sbjct: 3180 ttcctgctgttgctgctgtgc 3200
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 189     gttcctgctgttgctgctgtgctgc 213
               |||||||||||||||||||| ||||
Sbjct: 9877929 gttcctgctgttgctgctgtactgc 9877953
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 483      attgaacaaaaccacatcttttgccaacaggtatcttaaca 523
                ||||||||||||||||   |||||||||||| || ||||||
Sbjct: 21618427 attgaacaaaaccacactgtttgccaacaggaattttaaca 21618387



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     atgctgatgtaacaggatgg 125
               ||||||||||||||||||||
Sbjct: 4451194 atgctgatgtaacaggatgg 4451175
to top
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 664     aactccatttgctttttgctt 684
               |||||||||||||||||||||
Sbjct: 1843026 aactccatttgctttttgctt 1843046
to top
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0020D05
          Length = 158760

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 483    attgaacaaaaccacatcttttgccaacaggtatcttaaca 523
              ||||||||||||||||   |||||||||||| || ||||||
Sbjct: 107377 attgaacaaaaccacactgtttgccaacaggaattttaaca 107337
to top
>dbj|AK110474.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-H06, full
            insert sequence
          Length = 2290

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 189  gttcctgctgttgctgctgtgctgc 213
            |||||||||||||||||||| ||||
Sbjct: 1050 gttcctgctgttgctgctgtactgc 1026
to top
>gb|AC153102.3| Sus scrofa clone RP44-33N10, complete sequence
          Length = 113400

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 661    ttgaactccatttgctttttg 681
              |||||||||||||||||||||
Sbjct: 108209 ttgaactccatttgctttttg 108229
to top
>gb|AC154591.2| Mus musculus BAC clone RP23-370M19 from 16, complete sequence
          Length = 196385

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 255    catacccatacatgtttgggt 275
              |||||||||||||||||||||
Sbjct: 155985 catacccatacatgtttgggt 156005
to top
>dbj|AK060161.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H10, full
           insert sequence
          Length = 1037

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 483 attgaacaaaaccacatcttttgccaacaggtatcttaaca 523
           ||||||||||||||||   |||||||||||| || ||||||
Sbjct: 517 attgaacaaaaccacactgtttgccaacaggaattttaaca 477
to top
>gb|AY107267.1| Zea mays PCO073795 mRNA sequence
          Length = 1599

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 578 ctcgggtcaaggccaccaacaaata 602
           |||||||||||||| ||||||||||
Sbjct: 978 ctcgggtcaaggccgccaacaaata 954
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 189     gttcctgctgttgctgctgtgctgc 213
               |||||||||||||||||||| ||||
Sbjct: 9883968 gttcctgctgttgctgctgtactgc 9883992
to top
>ref|NM_118834.2| Arabidopsis thaliana RNA binding AT4G27000 mRNA, complete cds
          Length = 1696

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 377  tgtttgtttgaagggctccgaccccatgaaag 408
            |||||||| ||||| || ||||||||||||||
Sbjct: 1155 tgtttgttggaaggactgcgaccccatgaaag 1124
to top
>ref|XM_641913.1| Dictyostelium discoideum putative protein tyrosine kinase
            (DDB0191297), partial mRNA
          Length = 4464

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 189  gttcctgctgttgctgctgt 208
            ||||||||||||||||||||
Sbjct: 1889 gttcctgctgttgctgctgt 1870
to top
>ref|XM_508013.1| PREDICTED: Pan troglodytes similar to KIAA0185 (LOC450711), mRNA
          Length = 7176

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  cttttaataaaccaaaaaat 75
           ||||||||||||||||||||
Sbjct: 739 cttttaataaaccaaaaaat 720
to top
>ref|NM_184951.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1697

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 388  agggctccgaccccatgaaagcct 411
            |||||| |||||||||||||||||
Sbjct: 1066 agggctacgaccccatgaaagcct 1043
to top
>gb|BC052268.1| Homo sapiens TAF5 RNA polymerase II, TATA box binding protein
            (TBP)-associated factor, 100kDa, mRNA (cDNA clone
            IMAGE:6575596), partial cds
          Length = 3271

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   cttttaataaaccaaaaaat 75
            ||||||||||||||||||||
Sbjct: 1150 cttttaataaaccaaaaaat 1131
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 388      agggctccgaccccatgaaagcct 411
                |||||| |||||||||||||||||
Sbjct: 20463234 agggctacgaccccatgaaagcct 20463257
to top
>gb|AC166164.2| Mus musculus BAC clone RP23-394K2 from chromosome 17, complete sequence
          Length = 197143

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 188    cgttcctgctgttgctgctg 207
              ||||||||||||||||||||
Sbjct: 127367 cgttcctgctgttgctgctg 127348
to top
>gb|AC154581.2| Mus musculus BAC clone RP23-381G5 from chromosome 13, complete sequence
          Length = 200156

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     ataagagcatggatctagtc 51
              ||||||||||||||||||||
Sbjct: 157750 ataagagcatggatctagtc 157731
to top
>gb|AC093476.6| Mus musculus chromosome 6, clone RP23-55C15, complete sequence
          Length = 259659

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 603   tggtggaattgctaggatca 622
             ||||||||||||||||||||
Sbjct: 65292 tggtggaattgctaggatca 65273
to top
>ref|XM_715244.1| Candida albicans SC5314 protein kinase (RIM15) partial mRNA
          Length = 5772

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 189  gttcctgctgttgctgctgt 208
            ||||||||||||||||||||
Sbjct: 3737 gttcctgctgttgctgctgt 3718
to top
>ref|XM_448710.1| Candida glabrata CBS138, CAGL0K11374g partial mRNA
          Length = 1860

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 gttcctgctgttgctgctgt 208
           ||||||||||||||||||||
Sbjct: 736 gttcctgctgttgctgctgt 717
to top
>emb|Z82279.2|CER03C1 Caenorhabditis elegans Cosmid R03C1, complete sequence
          Length = 41369

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 182   tttacccgttcctgctgttgctgctgtg 209
             |||||| ||| |||||||||||||||||
Sbjct: 14028 tttacctgttgctgctgttgctgctgtg 14055
to top
>gb|AC131711.3| Mus musculus BAC clone RP23-192M18 from 6, complete sequence
          Length = 228400

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 603    tggtggaattgctaggatca 622
              ||||||||||||||||||||
Sbjct: 181953 tggtggaattgctaggatca 181934
to top
>ref|XM_883612.1| Candida albicans SC5314 hypothetical protein (CaJ7.0087) partial mRNA
          Length = 5772

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 189  gttcctgctgttgctgctgt 208
            ||||||||||||||||||||
Sbjct: 3737 gttcctgctgttgctgctgt 3718
to top
>gb|AY232273.1| Dictyostelium discoideum putative protein Roco11 (roco11) gene,
            complete cds
          Length = 4865

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 189  gttcctgctgttgctgctgt 208
            ||||||||||||||||||||
Sbjct: 2200 gttcctgctgttgctgctgt 2181
to top
>ref|NM_006951.3| Homo sapiens TAF5 RNA polymerase II, TATA box binding protein
            (TBP)-associated factor, 100kDa (TAF5), mRNA
          Length = 3283

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   cttttaataaaccaaaaaat 75
            ||||||||||||||||||||
Sbjct: 1158 cttttaataaaccaaaaaat 1139
to top
>emb|AL591408.19| Human DNA sequence from clone RP11-792D24 on chromosome 10 Contains the
              INA gene for internexin neuronal intermediate filament
              protein alpha, the RNF134 gene for ring finger protein 134,
              the TAF5D gene for 100 kD TAF5 RNA polymerase II TATA box
              binding protein (TBP)-associated factor, a novel gene, the
              5' end of the PDCD11 gene for programmed cell death 11 and
              four CpG islands, complete sequence
          Length = 174474

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     cttttaataaaccaaaaaat 75
              ||||||||||||||||||||
Sbjct: 131558 cttttaataaaccaaaaaat 131539
to top
>emb|X95525.1|HSTAFII10 H.sapiens mRNA for TAFII100 protein
          Length = 3089

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   cttttaataaaccaaaaaat 75
            ||||||||||||||||||||
Sbjct: 1158 cttttaataaaccaaaaaat 1139
to top
>gb|AY062999.1| Arabidopsis thaliana putative DNA binding protein (At4g27000) mRNA,
            complete cds
          Length = 1279

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 377  tgtttgtttgaagggctccgaccccatgaaag 408
            |||||||| ||||| || ||||||||||||||
Sbjct: 1064 tgtttgttggaaggactgcgaccccatgaaag 1033
to top
>gb|AF370339.1| Arabidopsis thaliana putative DNA binding protein (At4g27000) mRNA,
            complete cds
          Length = 1691

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 377  tgtttgtttgaagggctccgaccccatgaaag 408
            |||||||| ||||| || ||||||||||||||
Sbjct: 1155 tgtttgttggaaggactgcgaccccatgaaag 1124
to top
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 189     gttcctgctgttgctgctgt 208
               ||||||||||||||||||||
Sbjct: 1101634 gttcctgctgttgctgctgt 1101615
to top
>gb|AC132058.5| Rattus norvegicus 18 BAC CH230-229M9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 228492

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 657   tctcttgaactccatttgct 676
             ||||||||||||||||||||
Sbjct: 12764 tctcttgaactccatttgct 12783
to top
>emb|AL596129.27| Mouse DNA sequence from clone RP23-294E23 on chromosome 11 Contains the
             3' end of the Myh3 gene for embryonic skeletal muscle
             myosin heavy polypeptide 3, four novel genes
             (2310065F04Rik), the Myh2 gene for adult skeletal muscle
             myosin heavy polypeptide 2, the Myh1 gene for adult
             skeletal muscle myosin heavy polypeptide 1, the Myh4 gene
             for skeletal muscle  myosin heavy polypeptide 4 and the
             Myh8 gene for perinatal skeletal muscle myosin heavy
             polypeptide 8 (4832426G23Rik), complete sequence
          Length = 221384

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    gtatctgtcccatccatgcc 101
             ||||||||||||||||||||
Sbjct: 68443 gtatctgtcccatccatgcc 68462
to top
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66
          Length = 198372

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 377   tgtttgtttgaagggctccgaccccatgaaag 408
             |||||||| ||||| || ||||||||||||||
Sbjct: 59225 tgtttgttggaaggactgcgaccccatgaaag 59256
to top
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project)
          Length = 128574

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 377    tgtttgtttgaagggctccgaccccatgaaag 408
              |||||||| ||||| || ||||||||||||||
Sbjct: 103382 tgtttgttggaaggactgcgaccccatgaaag 103413
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 191     tcctgctgttgctgctgtgc 210
               ||||||||||||||||||||
Sbjct: 2479241 tcctgctgttgctgctgtgc 2479260
to top
>gb|AY093292.1| Arabidopsis thaliana putative DNA binding protein (At4g27000) mRNA,
            complete cds
          Length = 1408

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 377  tgtttgtttgaagggctccgaccccatgaaag 408
            |||||||| ||||| || ||||||||||||||
Sbjct: 1064 tgtttgttggaaggactgcgaccccatgaaag 1033
to top
>dbj|AK013294.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2810443C10 product:hypothetical
           Immunoglobulin subtype/Ig-like domain
           profile/Immunoglobulin-like containing protein, full
           insert sequence
          Length = 772

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 cgttcctgctgttgctgctg 207
           ||||||||||||||||||||
Sbjct: 193 cgttcctgctgttgctgctg 212
to top
>dbj|AK132018.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2810405L24 product:hypothetical
           Immunoglobulin subtype/Ig-like domain profile containing
           protein, full insert sequence
          Length = 986

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 cgttcctgctgttgctgctg 207
           ||||||||||||||||||||
Sbjct: 541 cgttcctgctgttgctgctg 560
to top
>dbj|AK153696.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630050O14 product:hypothetical protein,
           full insert sequence
          Length = 2476

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 194 tgctgttgctgctgtgctgctact 217
           |||||||||||||||| |||||||
Sbjct: 478 tgctgttgctgctgtgatgctact 455
to top
>dbj|AK221951.1| Arabidopsis thaliana mRNA for putative DNA binding protein,
           complete cds, clone: RAFL22-49-B18
          Length = 758

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 377 tgtttgtttgaagggctccgaccccatgaaag 408
           |||||||| ||||| || ||||||||||||||
Sbjct: 309 tgtttgttggaaggactgcgaccccatgaaag 278
to top
>dbj|AB179107.1| Macaca fascicularis testis cDNA clone: QtsA-12973, similar to human
           TAF5 RNA polymerase II, TATA box binding
           protein(TBP)-associated factor, 100kDa (TAF5),
           transcriptvariant 1, mRNA, RefSeq: NM_006951.2
          Length = 1651

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  cttttaataaaccaaaaaat 75
           ||||||||||||||||||||
Sbjct: 324 cttttaataaaccaaaaaat 305
to top
>gb|AY054487.1| Arabidopsis thaliana putative DNA binding protein (At4g27000;
            F10M23.340) mRNA, complete cds
          Length = 1569

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 377  tgtttgtttgaagggctccgaccccatgaaag 408
            |||||||| ||||| || ||||||||||||||
Sbjct: 1147 tgtttgttggaaggactgcgaccccatgaaag 1116
to top
>gb|U97549.1| Caenorhabditis elegans cosmid F15A8, complete sequence
          Length = 38066

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    ttaataaaccaaaaaatgtt 78
             ||||||||||||||||||||
Sbjct: 19338 ttaataaaccaaaaaatgtt 19319
to top
>gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome 13, complete sequence
          Length = 181174

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     ataagagcatggatctagtc 51
              ||||||||||||||||||||
Sbjct: 179212 ataagagcatggatctagtc 179231
to top
>gb|AC156447.2| Volvox carteri clone JGIAOBO-33C7, complete sequence
          Length = 34892

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   gttcctgctgttgctgctgt 208
             ||||||||||||||||||||
Sbjct: 28613 gttcctgctgttgctgctgt 28594
to top
>dbj|AK037593.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130028N20 product:hypothetical
           Immunoglobulin subtype/Ig-like domain
           profile/Immunoglobulin-like containing protein, full
           insert sequence
          Length = 3983

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 cgttcctgctgttgctgctg 207
           ||||||||||||||||||||
Sbjct: 161 cgttcctgctgttgctgctg 180
to top
>emb|BX470087.8| Zebrafish DNA sequence from clone CH211-202A10 in linkage group 3,
            complete sequence
          Length = 218404

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 58   tttaataaaccaaaaaatgttttg 81
            ||||||||||||||| ||||||||
Sbjct: 3702 tttaataaaccaaaacatgttttg 3725
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 388      agggctccgaccccatgaaagcct 411
                |||||| |||||||||||||||||
Sbjct: 20456263 agggctacgaccccatgaaagcct 20456286
to top
>gb|AC074136.4| Homo sapiens chromosome 16 clone CTD-2318B16, complete sequence
          Length = 105956

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    cttgtttgtttgaagggctc 394
              ||||||||||||||||||||
Sbjct: 104583 cttgtttgtttgaagggctc 104564
to top
>gb|AC125490.5| Homo sapiens BAC clone RP11-710I20 from 2, complete sequence
          Length = 75765

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    aataaaccaaaaaatgtttt 80
             ||||||||||||||||||||
Sbjct: 16178 aataaaccaaaaaatgtttt 16197
to top
>dbj|AK223615.1| Homo sapiens mRNA for Transcription initiation factor TFIID subunit 5
            variant, clone: FCC133F11
          Length = 3101

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   cttttaataaaccaaaaaat 75
            ||||||||||||||||||||
Sbjct: 1144 cttttaataaaccaaaaaat 1125
to top
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete
              sequence
          Length = 152883

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 388    agggctccgaccccatgaaagcct 411
              |||||| |||||||||||||||||
Sbjct: 107534 agggctacgaccccatgaaagcct 107557
to top
>gb|AC007595.9| Homo sapiens chromosome 16 clone RP11-109M19, complete sequence
          Length = 186303

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    cttgtttgtttgaagggctc 394
              ||||||||||||||||||||
Sbjct: 137021 cttgtttgtttgaagggctc 137040
to top
>gb|AC127894.6| Homo sapiens 12 BAC RP11-324P9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 96967

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 383   tttgaagggctccgaccccatgaa 406
             |||||||||||| |||||||||||
Sbjct: 81158 tttgaagggctctgaccccatgaa 81181
to top
>ref|XM_219965.3| PREDICTED: Rattus norvegicus TAF5 RNA polymerase II, TATA box binding
            protein (TBP)-associated factor (predicted)
            (Taf5_predicted), mRNA
          Length = 3252

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   cttttaataaaccaaaaaat 75
            ||||||||||||||||||||
Sbjct: 1152 cttttaataaaccaaaaaat 1133
to top
>ref|NM_001033405.1| Mus musculus triggering receptor expressed on myeloid cells-like 2
           (Treml2), mRNA
          Length = 2701

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 cgttcctgctgttgctgctg 207
           ||||||||||||||||||||
Sbjct: 608 cgttcctgctgttgctgctg 627
to top
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0544B02
          Length = 156339

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    atgctgatgtaacaggatgg 125
              ||||||||||||||||||||
Sbjct: 134758 atgctgatgtaacaggatgg 134739
to top
>emb|X69977.1|XLXPGAA X.laevis mRNA for XP-G related factor
          Length = 3714

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 188  cgttcctgctgttgctgctg 207
            ||||||||||||||||||||
Sbjct: 2380 cgttcctgctgttgctgctg 2361
to top
>dbj|AK101593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051E20, full
            insert sequence
          Length = 1710

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 388  agggctccgaccccatgaaagcct 411
            |||||| |||||||||||||||||
Sbjct: 1158 agggctacgaccccatgaaagcct 1135
to top
>gb|AF191743.1|AF191743 Crypthecodinium cohnii strain ATTC50050 Dinap1 interacting protein 4
            (Dip4) mRNA, partial cds
          Length = 2791

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 193  ctgctgttgctgctgtgctg 212
            ||||||||||||||||||||
Sbjct: 1233 ctgctgttgctgctgtgctg 1214
to top
>dbj|AK063783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-D09, full
           insert sequence
          Length = 776

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 388 agggctccgaccccatgaaagcct 411
           |||||| |||||||||||||||||
Sbjct: 398 agggctacgaccccatgaaagcct 375
to top
>gb|DQ341272.1| Mus musculus trem-like transcript 2 (Tlt2) mRNA, complete cds
          Length = 2701

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 cgttcctgctgttgctgctg 207
           ||||||||||||||||||||
Sbjct: 608 cgttcctgctgttgctgctg 627
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 191     tcctgctgttgctgctgtgc 210
               ||||||||||||||||||||
Sbjct: 3065874 tcctgctgttgctgctgtgc 3065893
to top
>gb|AC079682.29| Mus musculus strain C57BL/6J chromosome 3 clone rp23-463h24, complete
             sequence
          Length = 181082

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 671   tttgctttttgcttatttgc 690
             ||||||||||||||||||||
Sbjct: 61468 tttgctttttgcttatttgc 61449
to top
>gb|U80191.1|HSU80191 Human TFIID subunit TAFII100 mRNA, complete cds
          Length = 2751

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   cttttaataaaccaaaaaat 75
            ||||||||||||||||||||
Sbjct: 1149 cttttaataaaccaaaaaat 1130
to top
>gb|U75309.1|HSU75309 Human TBP-associated factor (hTAFII100) mRNA, partial cds
          Length = 2443

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   cttttaataaaccaaaaaat 75
            ||||||||||||||||||||
Sbjct: 1138 cttttaataaaccaaaaaat 1119
to top
>emb|CT009754.11| Mouse DNA sequence from clone RP23-5P19 on chromosome 13, complete
              sequence
          Length = 255133

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     ataagagcatggatctagtc 51
              ||||||||||||||||||||
Sbjct: 240595 ataagagcatggatctagtc 240576
to top
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence
          Length = 949626

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    gttcctgctgttgctgctgt 208
              ||||||||||||||||||||
Sbjct: 141018 gttcctgctgttgctgctgt 140999
to top
>dbj|AP006127.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT48O21, TM0211,
              complete sequence
          Length = 137303

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 484    ttgaacaaaaccacatcttt 503
              ||||||||||||||||||||
Sbjct: 121230 ttgaacaaaaccacatcttt 121249
to top
>dbj|AP004625.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT14E05b, TM0089b,
             complete sequence
          Length = 126514

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 488   acaaaaccacatcttttgccaacaggtatcttaaca 523
             ||||||||||| | ||| || |||||||||||||||
Sbjct: 61322 acaaaaccacaccctttccccacaggtatcttaaca 61357
to top
>emb|AL670260.10| Mouse DNA sequence from clone RP23-1I17 on chromosome 4, complete
              sequence
          Length = 147052

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    gttcctgctgttgctgctgt 208
              ||||||||||||||||||||
Sbjct: 110133 gttcctgctgttgctgctgt 110152



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    gttcctgctgttgctgctgt 208
              ||||||||||||||||||||
Sbjct: 109971 gttcctgctgttgctgctgt 109990


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,647,976
Number of Sequences: 3902068
Number of extensions: 7647976
Number of successful extensions: 157441
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 156677
Number of HSP's gapped (non-prelim): 752
length of query: 698
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 675
effective length of database: 17,143,297,704
effective search space: 11571725950200
effective search space used: 11571725950200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top