Clone Information

BLAST Search Result

Clone Name	rbags20g06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK102419.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	228	2e-56
2	ref\|XM_468068.1\| Oryza sativa (japonica cultivar-group), mRNA	222	1e-54
3	ref\|XM_468067.1\| Oryza sativa (japonica cultivar-group), mRNA	222	1e-54
4	ref\|XM_507006.1\| PREDICTED Oryza sativa (japonica cultivar-group...	222	1e-54
5	dbj\|AK104892.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	222	1e-54
6	dbj\|AK070394.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	222	1e-54
7	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	141	4e-30
8	dbj\|AP005538.3\| Oryza sativa (japonica cultivar-group) genomic D...	141	4e-30
9	dbj\|AP004140.3\| Oryza sativa (japonica cultivar-group) genomic D...	141	4e-30
10	gb\|AC130200.30\| Medicago truncatula clone mth1-64n13, complete s...	46	0.15
11	gb\|AC154375.2\| Mus musculus BAC clone RP23-69H21 from chromosome...	42	2.4
12	emb\|CR407585.14\| Zebrafish DNA sequence from clone CH211-141O18 ...	42	2.4
13	gb\|CP000302.1\| Shewanella denitrificans OS217, complete genome	42	2.4
14	emb\|CR407558.22\| Zebrafish DNA sequence from clone CH211-107M8 i...	42	2.4
15	emb\|CR751236.6\| Zebrafish DNA sequence from clone DKEY-27M6 in l...	42	2.4
16	gb\|AC113619.5\| Drosophila melanogaster X BAC RP98-22D21 (Roswell...	42	2.4
17	gb\|AC157350.29\| Medicago truncatula clone mth2-143n6, complete s...	42	2.4
18	gb\|AC023682.4\| Drosophila melanogaster X BAC RP98-7F10 (Roswell ...	42	2.4
19	tpg\|BK003046.1\| TPA: TPA_inf: Drosophila melanogaster HDC17643 (...	42	2.4
20	gb\|AC158538.2\| Mus musculus BAC clone RP23-2H11 from chromosome ...	42	2.4
21	gb\|AC152930.2\| Xenopus tropicalis clone ISB1-158G10, complete se...	42	2.4
22	gb\|AE003436.3\| Drosophila melanogaster chromosome X, section 20 ...	42	2.4
23	emb\|X58635.1\|PUPENRPL P.univalens telomeric pentameric repeat se...	42	2.4
24	emb\|X57510.1\|PUPENRPJ P.univalens telomeric pentameric repeat se...	42	2.4
25	emb\|X57502.1\|PUPENRPB P.univalens terminal heterochromatin penta...	42	2.4
26	emb\|X57501.1\|PUPENRPA P.univalens terminal heterochromatin penta...	42	2.4
27	ref\|NM_192565.1\| Oryza sativa (japonica cultivar-group), predic...	40	9.6
28	gb\|AC102290.7\| Mus musculus chromosome 3, clone RP24-359J7, comp...	40	9.6
29	gb\|AC116697.7\| Mus musculus chromosome 3, clone RP24-444C12, com...	40	9.6
30	gb\|AC149482.1\| Populus trichocarpa clone Pop1-69G3, complete seq...	40	9.6
31	gb\|CP000359.1\| Deinococcus geothermalis DSM 11300, complete genome	40	9.6
32	gb\|AC022062.10\| Mus musculus chromosome 5, clone RP23-57P23, com...	40	9.6
33	ref\|XM_446831.1\| Candida glabrata CBS138, CAGL0H00737g partial mRNA	40	9.6
34	gb\|AC132386.3\| Mus musculus BAC clone RP23-438O22 from chromosom...	40	9.6
35	emb\|AL645728.31\| Human DNA sequence from clone RP5-832C2 on chro...	40	9.6
36	emb\|AL391707.9\| Human DNA sequence from clone RP11-166B18 on chr...	40	9.6
37	emb\|AL359205.15\| Human DNA sequence from clone RP11-345N16 on ch...	40	9.6
38	emb\|AL137795.10\| Human DNA sequence from clone RP5-1096P7 on chr...	40	9.6
39	gb\|AC158307.5\| Mus musculus chromosome 3, clone RP23-148J20, com...	40	9.6
40	ref\|XM_777880.1\| PREDICTED: Strongylocentrotus purpuratus simila...	40	9.6
41	emb\|CR380954.1\| Candida glabrata strain CBS138 chromosome H comp...	40	9.6
42	emb\|AJ495788.1\|OSA495788 Oryza sativa (japonica cultivar-group) ...	40	9.6
43	dbj\|AK124299.1\| Homo sapiens cDNA FLJ42306 fis, clone TRACH2001646	40	9.6
44	emb\|BX897656.9\| Zebrafish DNA sequence from clone CH211-271K12, ...	40	9.6
45	emb\|BX322600.13\| Zebrafish DNA sequence from clone CH211-273N5, ...	40	9.6
46	gb\|AC155651.4\| Mus musculus 6 BAC RP24-111E13 (Roswell Park Canc...	40	9.6
47	gb\|AC158664.5\| Mus musculus 6 BAC RP23-24F17 (Roswell Park Cance...	40	9.6
48	dbj\|AP008215.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.6
49	gb\|AC073641.3\| Homo sapiens BAC clone RP11-368E14 from 2, comple...	40	9.6
50	gb\|AC013404.3\| Homo sapiens BAC clone RP11-293L17 from 2, comple...	40	9.6
51	dbj\|AP006527.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.6
52	emb\|BX469935.5\| Zebrafish DNA sequence from clone CH211-244H1 in...	40	9.6
53	dbj\|AK103040.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	9.6
54	emb\|BX927259.8\| Zebrafish DNA sequence from clone DKEY-257J24 in...	40	9.6
55	emb\|AL132778.6\|CNS01DTJ Human chromosome 14 DNA sequence BAC C-2...	40	9.6
56	emb\|AL133162.4\|CNS01DU5 Human chromosome 14 DNA sequence BAC C-2...	40	9.6
57	emb\|CT009727.7\| Zebrafish DNA sequence from clone CH73-40M17 in ...	40	9.6
58	emb\|BX323588.10\| Zebrafish DNA sequence from clone DKEY-225F23 i...	40	9.6
59	emb\|BX324221.6\| Mouse DNA sequence from clone RP23-395D17 on chr...	40	9.6
60	gb\|AY654741.1\| Anguilla japonica cholesterol side-chain cleavage...	40	9.6
61	emb\|AL672074.19\| Mouse DNA sequence from clone RP23-404I18 on ch...	40	9.6
62	emb\|BX005173.7\| Mouse DNA sequence from clone RP23-232O7 on chro...	40	9.6
63	emb\|BX000353.8\| Zebrafish DNA sequence from clone DKEY-147H15, c...	40	9.6
64	gb\|U67133.1\|PCU67133 Petroselinum crispum DNA-binding protein Pc...	40	9.6
65	gb\|U67132.1\|PCU67132 Petroselinum crispum DNA-binding protein Pc...	40	9.6
66	emb\|AL935164.6\| Zebrafish DNA sequence from clone CH211-190N9, c...	40	9.6
67	emb\|AL691501.15\| Mouse DNA sequence from clone RP23-220M11 on ch...	40	9.6

>dbj|AK102419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093D07, full
            insert sequence
          Length = 2257

 Score =  228 bits (115), Expect = 2e-56
 Identities = 295/355 (83%)
 Strand = Plus / Minus

                                                                        
Query: 224  tgctctgccctgagaacttgattgccgctgccaggttgccggcttgcggctggagctcaa 283
            ||||||||||||| |||||||| | | || ||| || ||| ||||| | ||| | |||| 
Sbjct: 1945 tgctctgccctgaaaacttgatcggcactcccacgtcgccagcttgagactgcatctcag 1886

                                                                        
Query: 284  ctagctctttcactcgtagcagaatggacggtggtattggtatgatcgaagggttgcttt 343
            | || | ||| |||||||||||||| |||  |||||| ||||||   ||||| ||||| |
Sbjct: 1885 ccagtttttttactcgtagcagaatcgacactggtatcggtatggcagaaggattgctct 1826

                                                                        
Query: 344  tccgcggacaaacaccgtcgttttccggcgaaagctgtgtctggctagctctgatcagat 403
            |||| ||||||||||| |||||||| |  ||||| ||||||||||| || ||||||||||
Sbjct: 1825 tccgtggacaaacaccatcgttttcagtggaaagttgtgtctggctggccctgatcagat 1766

                                                                        
Query: 404  tgcgccacttatccttgagatccactgaggtgcgataagaatatgaggcgaaggatagtc 463
            | ||||| || ||||| |||||||| |||||||| || |||||||| | ||||| |||||
Sbjct: 1765 tccgccatttgtccttaagatccaccgaggtgcggtacgaatatgatgagaaggctagtc 1706

                                                                        
Query: 464  ttctaatctcagaccacttgccaggcccgaactgagccacaccatcgaccagcttcagaa 523
            |||||||||| ||||| ||||||| |||  |  | |||||||||||||||||||||| ||
Sbjct: 1705 ttctaatctcggaccatttgccagccccatatcgggccacaccatcgaccagcttcacaa 1646

                                                                   
Query: 524  cctcggacaatgtccacgcccgatgatgcttccgcttcaaactccgctttgtttt 578
            ||||  |||||||||| || ||||||||||||||||||  || ||||||||||||
Sbjct: 1645 cctcacacaatgtccatgctcgatgatgcttccgcttcccaccccgctttgtttt 1591

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>ref|XM_468068.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2030

 Score =  222 bits (112), Expect = 1e-54
 Identities = 241/284 (84%)
 Strand = Plus / Minus

                                                                        
Query: 295  actcgtagcagaatggacggtggtattggtatgatcgaagggttgcttttccgcggacaa 354
            |||||||||||||| |||  |||||| ||||||   ||||| ||||| ||||| ||||||
Sbjct: 1672 actcgtagcagaatcgacactggtatcggtatggcagaaggattgctcttccgtggacaa 1613

                                                                        
Query: 355  acaccgtcgttttccggcgaaagctgtgtctggctagctctgatcagattgcgccactta 414
            ||||| |||||||| |  ||||| ||||||||||| || ||||||||||| ||||| || 
Sbjct: 1612 acaccatcgttttcagtggaaagttgtgtctggctggccctgatcagattccgccatttg 1553

                                                                        
Query: 415  tccttgagatccactgaggtgcgataagaatatgaggcgaaggatagtcttctaatctca 474
            ||||| |||||||| |||||||| || |||||||| | ||||| ||||||||||||||| 
Sbjct: 1552 tccttaagatccaccgaggtgcggtacgaatatgatgagaaggctagtcttctaatctcg 1493

                                                                        
Query: 475  gaccacttgccaggcccgaactgagccacaccatcgaccagcttcagaacctcggacaat 534
            ||||| ||||||| |||  |  | |||||||||||||||||||||| ||||||  |||||
Sbjct: 1492 gaccatttgccagccccatatcgggccacaccatcgaccagcttcacaacctcacacaat 1433

                                                        
Query: 535  gtccacgcccgatgatgcttccgcttcaaactccgctttgtttt 578
            ||||| || ||||||||||||||||||  || ||||||||||||
Sbjct: 1432 gtccatgctcgatgatgcttccgcttcccaccccgctttgtttt 1389

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>ref|XM_468067.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2256

 Score =  222 bits (112), Expect = 1e-54
 Identities = 241/284 (84%)
 Strand = Plus / Minus

                                                                        
Query: 295  actcgtagcagaatggacggtggtattggtatgatcgaagggttgcttttccgcggacaa 354
            |||||||||||||| |||  |||||| ||||||   ||||| ||||| ||||| ||||||
Sbjct: 1873 actcgtagcagaatcgacactggtatcggtatggcagaaggattgctcttccgtggacaa 1814

                                                                        
Query: 355  acaccgtcgttttccggcgaaagctgtgtctggctagctctgatcagattgcgccactta 414
            ||||| |||||||| |  ||||| ||||||||||| || ||||||||||| ||||| || 
Sbjct: 1813 acaccatcgttttcagtggaaagttgtgtctggctggccctgatcagattccgccatttg 1754

                                                                        
Query: 415  tccttgagatccactgaggtgcgataagaatatgaggcgaaggatagtcttctaatctca 474
            ||||| |||||||| |||||||| || |||||||| | ||||| ||||||||||||||| 
Sbjct: 1753 tccttaagatccaccgaggtgcggtacgaatatgatgagaaggctagtcttctaatctcg 1694

                                                                        
Query: 475  gaccacttgccaggcccgaactgagccacaccatcgaccagcttcagaacctcggacaat 534
            ||||| ||||||| |||  |  | |||||||||||||||||||||| ||||||  |||||
Sbjct: 1693 gaccatttgccagccccatatcgggccacaccatcgaccagcttcacaacctcacacaat 1634

                                                        
Query: 535  gtccacgcccgatgatgcttccgcttcaaactccgctttgtttt 578
            ||||| || ||||||||||||||||||  || ||||||||||||
Sbjct: 1633 gtccatgctcgatgatgcttccgcttcccaccccgctttgtttt 1590

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>ref|XM_507006.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0013K01.35-1
            mRNA
          Length = 2338

 Score =  222 bits (112), Expect = 1e-54
 Identities = 241/284 (84%)
 Strand = Plus / Minus

                                                                        
Query: 295  actcgtagcagaatggacggtggtattggtatgatcgaagggttgcttttccgcggacaa 354
            |||||||||||||| |||  |||||| ||||||   ||||| ||||| ||||| ||||||
Sbjct: 1959 actcgtagcagaatcgacactggtatcggtatggcagaaggattgctcttccgtggacaa 1900

                                                                        
Query: 355  acaccgtcgttttccggcgaaagctgtgtctggctagctctgatcagattgcgccactta 414
            ||||| |||||||| |  ||||| ||||||||||| || ||||||||||| ||||| || 
Sbjct: 1899 acaccatcgttttcagtggaaagttgtgtctggctggccctgatcagattccgccatttg 1840

                                                                        
Query: 415  tccttgagatccactgaggtgcgataagaatatgaggcgaaggatagtcttctaatctca 474
            ||||| |||||||| |||||||| || |||||||| | ||||| ||||||||||||||| 
Sbjct: 1839 tccttaagatccaccgaggtgcggtacgaatatgatgagaaggctagtcttctaatctcg 1780

                                                                        
Query: 475  gaccacttgccaggcccgaactgagccacaccatcgaccagcttcagaacctcggacaat 534
            ||||| ||||||| |||  |  | |||||||||||||||||||||| ||||||  |||||
Sbjct: 1779 gaccatttgccagccccatatcgggccacaccatcgaccagcttcacaacctcacacaat 1720

                                                        
Query: 535  gtccacgcccgatgatgcttccgcttcaaactccgctttgtttt 578
            ||||| || ||||||||||||||||||  || ||||||||||||
Sbjct: 1719 gtccatgctcgatgatgcttccgcttcccaccccgctttgtttt 1676

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>dbj|AK104892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-E03, full
            insert sequence
          Length = 2030

 Score =  222 bits (112), Expect = 1e-54
 Identities = 241/284 (84%)
 Strand = Plus / Minus

                                                                        
Query: 295  actcgtagcagaatggacggtggtattggtatgatcgaagggttgcttttccgcggacaa 354
            |||||||||||||| |||  |||||| ||||||   ||||| ||||| ||||| ||||||
Sbjct: 1672 actcgtagcagaatcgacactggtatcggtatggcagaaggattgctcttccgtggacaa 1613

                                                                        
Query: 355  acaccgtcgttttccggcgaaagctgtgtctggctagctctgatcagattgcgccactta 414
            ||||| |||||||| |  ||||| ||||||||||| || ||||||||||| ||||| || 
Sbjct: 1612 acaccatcgttttcagtggaaagttgtgtctggctggccctgatcagattccgccatttg 1553

                                                                        
Query: 415  tccttgagatccactgaggtgcgataagaatatgaggcgaaggatagtcttctaatctca 474
            ||||| |||||||| |||||||| || |||||||| | ||||| ||||||||||||||| 
Sbjct: 1552 tccttaagatccaccgaggtgcggtacgaatatgatgagaaggctagtcttctaatctcg 1493

                                                                        
Query: 475  gaccacttgccaggcccgaactgagccacaccatcgaccagcttcagaacctcggacaat 534
            ||||| ||||||| |||  |  | |||||||||||||||||||||| ||||||  |||||
Sbjct: 1492 gaccatttgccagccccatatcgggccacaccatcgaccagcttcacaacctcacacaat 1433

                                                        
Query: 535  gtccacgcccgatgatgcttccgcttcaaactccgctttgtttt 578
            ||||| || ||||||||||||||||||  || ||||||||||||
Sbjct: 1432 gtccatgctcgatgatgcttccgcttcccaccccgctttgtttt 1389

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>dbj|AK070394.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049B09, full
            insert sequence
          Length = 2336

 Score =  222 bits (112), Expect = 1e-54
 Identities = 241/284 (84%)
 Strand = Plus / Minus

                                                                        
Query: 295  actcgtagcagaatggacggtggtattggtatgatcgaagggttgcttttccgcggacaa 354
            |||||||||||||| |||  |||||| ||||||   ||||| ||||| ||||| ||||||
Sbjct: 1957 actcgtagcagaatcgacactggtatcggtatggcagaaggattgctcttccgtggacaa 1898

                                                                        
Query: 355  acaccgtcgttttccggcgaaagctgtgtctggctagctctgatcagattgcgccactta 414
            ||||| |||||||| |  ||||| ||||||||||| || ||||||||||| ||||| || 
Sbjct: 1897 acaccatcgttttcagtggaaagttgtgtctggctggccctgatcagattccgccatttg 1838

                                                                        
Query: 415  tccttgagatccactgaggtgcgataagaatatgaggcgaaggatagtcttctaatctca 474
            ||||| |||||||| |||||||| || |||||||| | ||||| ||||||||||||||| 
Sbjct: 1837 tccttaagatccaccgaggtgcggtacgaatatgatgagaaggctagtcttctaatctcg 1778

                                                                        
Query: 475  gaccacttgccaggcccgaactgagccacaccatcgaccagcttcagaacctcggacaat 534
            ||||| ||||||| |||  |  | |||||||||||||||||||||| ||||||  |||||
Sbjct: 1777 gaccatttgccagccccatatcgggccacaccatcgaccagcttcacaacctcacacaat 1718

                                                        
Query: 535  gtccacgcccgatgatgcttccgcttcaaactccgctttgtttt 578
            ||||| || ||||||||||||||||||  || ||||||||||||
Sbjct: 1717 gtccatgctcgatgatgcttccgcttcccaccccgctttgtttt 1674

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  141 bits (71), Expect = 4e-30
 Identities = 140/163 (85%)
 Strand = Plus / Minus

                                                                            
Query: 416      ccttgagatccactgaggtgcgataagaatatgaggcgaaggatagtcttctaatctcag 475
                |||| |||||||| |||||||| || |||||||| | ||||| ||||||||||||||| |
Sbjct: 32850571 ccttaagatccaccgaggtgcggtacgaatatgatgagaaggctagtcttctaatctcgg 32850512

                                                                            
Query: 476      accacttgccaggcccgaactgagccacaccatcgaccagcttcagaacctcggacaatg 535
                |||| ||||||| |||  |  | |||||||||||||||||||||| ||||||  ||||||
Sbjct: 32850511 accatttgccagccccatatcgggccacaccatcgaccagcttcacaacctcacacaatg 32850452

                                                           
Query: 536      tccacgcccgatgatgcttccgcttcaaactccgctttgtttt 578
                |||| || ||||||||||||||||||  || ||||||||||||
Sbjct: 32850451 tccatgctcgatgatgcttccgcttcccaccccgctttgtttt 32850409



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                            
Query: 295      actcgtagcagaatggacggtggtattggtatgatcgaagggttgcttttccgcggacaa 354
                |||||||||||||| |||  |||||| ||||||   ||||| ||||| ||||| ||||||
Sbjct: 32850877 actcgtagcagaatcgacactggtatcggtatggcagaaggattgctcttccgtggacaa 32850818

                     
Query: 355      acacc 359
                |||||
Sbjct: 32850817 acacc 32850813



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 373      gaaagctgtgtctggctagctctgatcagattgcgcca 410
                ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 32850688 gaaagttgtgtctggctggccctgatcagattccgcca 32850651

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>dbj|AP005538.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0013K01
          Length = 139464

 Score =  141 bits (71), Expect = 4e-30
 Identities = 140/163 (85%)
 Strand = Plus / Minus

                                                                          
Query: 416    ccttgagatccactgaggtgcgataagaatatgaggcgaaggatagtcttctaatctcag 475
              |||| |||||||| |||||||| || |||||||| | ||||| ||||||||||||||| |
Sbjct: 108589 ccttaagatccaccgaggtgcggtacgaatatgatgagaaggctagtcttctaatctcgg 108530

                                                                          
Query: 476    accacttgccaggcccgaactgagccacaccatcgaccagcttcagaacctcggacaatg 535
              |||| ||||||| |||  |  | |||||||||||||||||||||| ||||||  ||||||
Sbjct: 108529 accatttgccagccccatatcgggccacaccatcgaccagcttcacaacctcacacaatg 108470

                                                         
Query: 536    tccacgcccgatgatgcttccgcttcaaactccgctttgtttt 578
              |||| || ||||||||||||||||||  || ||||||||||||
Sbjct: 108469 tccatgctcgatgatgcttccgcttcccaccccgctttgtttt 108427



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                          
Query: 295    actcgtagcagaatggacggtggtattggtatgatcgaagggttgcttttccgcggacaa 354
              |||||||||||||| |||  |||||| ||||||   ||||| ||||| ||||| ||||||
Sbjct: 108895 actcgtagcagaatcgacactggtatcggtatggcagaaggattgctcttccgtggacaa 108836

                   
Query: 355    acacc 359
              |||||
Sbjct: 108835 acacc 108831



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 373    gaaagctgtgtctggctagctctgatcagattgcgcca 410
              ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 108706 gaaagttgtgtctggctggccctgatcagattccgcca 108669

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>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1534_E09
          Length = 126209

 Score =  141 bits (71), Expect = 4e-30
 Identities = 140/163 (85%)
 Strand = Plus / Minus

                                                                        
Query: 416  ccttgagatccactgaggtgcgataagaatatgaggcgaaggatagtcttctaatctcag 475
            |||| |||||||| |||||||| || |||||||| | ||||| ||||||||||||||| |
Sbjct: 5312 ccttaagatccaccgaggtgcggtacgaatatgatgagaaggctagtcttctaatctcgg 5253

                                                                        
Query: 476  accacttgccaggcccgaactgagccacaccatcgaccagcttcagaacctcggacaatg 535
            |||| ||||||| |||  |  | |||||||||||||||||||||| ||||||  ||||||
Sbjct: 5252 accatttgccagccccatatcgggccacaccatcgaccagcttcacaacctcacacaatg 5193

                                                       
Query: 536  tccacgcccgatgatgcttccgcttcaaactccgctttgtttt 578
            |||| || ||||||||||||||||||  || ||||||||||||
Sbjct: 5192 tccatgctcgatgatgcttccgcttcccaccccgctttgtttt 5150



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 295  actcgtagcagaatggacggtggtattggtatgatcgaagggttgcttttccgcggacaa 354
            |||||||||||||| |||  |||||| ||||||   ||||| ||||| ||||| ||||||
Sbjct: 5618 actcgtagcagaatcgacactggtatcggtatggcagaaggattgctcttccgtggacaa 5559

                 
Query: 355  acacc 359
            |||||
Sbjct: 5558 acacc 5554



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 373  gaaagctgtgtctggctagctctgatcagattgcgcca 410
            ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 5429 gaaagttgtgtctggctggccctgatcagattccgcca 5392

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>gb|AC130200.30| Medicago truncatula clone mth1-64n13, complete sequence
          Length = 119506

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 8     atgacattgcattgcattgcatt 30
             |||||||||||||||||||||||
Sbjct: 53472 atgacattgcattgcattgcatt 53494

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>gb|AC154375.2| Mus musculus BAC clone RP23-69H21 from chromosome 12, complete sequence
          Length = 169125

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    cattgcattgcattgcatttc 32
             |||||||||||||||||||||
Sbjct: 75891 cattgcattgcattgcatttc 75871



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    acattgcattgcattgcatt 30
             ||||||||||||||||||||
Sbjct: 75902 acattgcattgcattgcatt 75883

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>emb|CR407585.14| Zebrafish DNA sequence from clone CH211-141O18 in linkage group 6,
             complete sequence
          Length = 164483

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     tgacattgcattgcattgcat 29
             |||||||||||||||||||||
Sbjct: 49422 tgacattgcattgcattgcat 49402

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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 12     cattgcattgcattgcatttc 32
              |||||||||||||||||||||
Sbjct: 989889 cattgcattgcattgcatttc 989909

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>emb|CR407558.22| Zebrafish DNA sequence from clone CH211-107M8 in linkage group 8,
              complete sequence
          Length = 175706

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 9      tgacattgcattgcattgcat 29
              |||||||||||||||||||||
Sbjct: 164878 tgacattgcattgcattgcat 164898

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>emb|CR751236.6| Zebrafish DNA sequence from clone DKEY-27M6 in linkage group 23,
             complete sequence
          Length = 108342

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 12    cattgcattgcattgcatttc 32
             |||||||||||||||||||||
Sbjct: 52654 cattgcattgcattgcatttc 52674

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>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 160001

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 12     cattgcattgcattgcatttc 32
              |||||||||||||||||||||
Sbjct: 155878 cattgcattgcattgcatttc 155898

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>gb|AC157350.29| Medicago truncatula clone mth2-143n6, complete sequence
          Length = 131960

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    acattgcattgcattgcattt 31
             |||||||||||||||||||||
Sbjct: 32176 acattgcattgcattgcattt 32156

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>gb|AC023682.4| Drosophila melanogaster X BAC RP98-7F10 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179236

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 12    cattgcattgcattgcatttc 32
             |||||||||||||||||||||
Sbjct: 39154 cattgcattgcattgcatttc 39174

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>tpg|BK003046.1| TPA: TPA_inf: Drosophila melanogaster HDC17643 (HDC17643) gene,
           complete cds
          Length = 2258

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  cattgcattgcattgcatttc 32
           |||||||||||||||||||||
Sbjct: 824 cattgcattgcattgcatttc 804

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>gb|AC158538.2| Mus musculus BAC clone RP23-2H11 from chromosome 13, complete sequence
          Length = 237313

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 609   tgcttctatggaatgagtctc 629
             |||||||||||||||||||||
Sbjct: 40861 tgcttctatggaatgagtctc 40881

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>gb|AC152930.2| Xenopus tropicalis clone ISB1-158G10, complete sequence
          Length = 95175

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     tgacattgcattgcattgcat 29
             |||||||||||||||||||||
Sbjct: 64794 tgacattgcattgcattgcat 64774

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>gb|AE003436.3| Drosophila melanogaster chromosome X, section 20 of 74 of the complete
              sequence
          Length = 317322

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 12     cattgcattgcattgcatttc 32
              |||||||||||||||||||||
Sbjct: 237479 cattgcattgcattgcatttc 237459

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>emb|X58635.1|PUPENRPL P.univalens telomeric pentameric repeat segment DNA (clone pTem5)
          Length = 784

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  cattgcattgcattgcatttc 32
           |||||||||||||||||||||
Sbjct: 581 cattgcattgcattgcatttc 601

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>emb|X57510.1|PUPENRPJ P.univalens telomeric pentameric repeat segment DNA (clone pTem1)
          Length = 1177

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  cattgcattgcattgcatttc 32
           |||||||||||||||||||||
Sbjct: 813 cattgcattgcattgcatttc 833



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  cattgcattgcattgcatttc 32
           |||||||||||||||||||||
Sbjct: 228 cattgcattgcattgcatttc 248

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>emb|X57502.1|PUPENRPB P.univalens terminal heterochromatin pentameric repeat segment DNA
           (clone pAm2)
          Length = 220

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  cattgcattgcattgcatttc 32
           |||||||||||||||||||||
Sbjct: 139 cattgcattgcattgcatttc 159

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>emb|X57501.1|PUPENRPA P.univalens terminal heterochromatin pentameric repeat segment DNA
           (clone pAm1)
          Length = 594

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  cattgcattgcattgcatttc 32
           |||||||||||||||||||||
Sbjct: 269 cattgcattgcattgcatttc 289

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>ref|NM_192565.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 894

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 ttgcgccacttatccttgag 422
           ||||||||||||||||||||
Sbjct: 164 ttgcgccacttatccttgag 145

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>gb|AC102290.7| Mus musculus chromosome 3, clone RP24-359J7, complete sequence
          Length = 175819

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     acattgcattgcattgcatt 30
              ||||||||||||||||||||
Sbjct: 110125 acattgcattgcattgcatt 110106



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     cattgcattgcattgcattt 31
              ||||||||||||||||||||
Sbjct: 110119 cattgcattgcattgcattt 110100

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>gb|AC116697.7| Mus musculus chromosome 3, clone RP24-444C12, complete sequence
          Length = 183146

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 658   cctttcttctcagttgtttc 677
             ||||||||||||||||||||
Sbjct: 78160 cctttcttctcagttgtttc 78179

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>gb|AC149482.1| Populus trichocarpa clone Pop1-69G3, complete sequence
          Length = 107795

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 641   ccatctctatatgctctcct 660
             ||||||||||||||||||||
Sbjct: 30131 ccatctctatatgctctcct 30112

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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 509   cgaccagcttcagaacctcg 528
             ||||||||||||||||||||
Sbjct: 84034 cgaccagcttcagaacctcg 84053

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>gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, complete sequence
          Length = 235363

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     cattgcattgcattgcattt 31
              ||||||||||||||||||||
Sbjct: 195312 cattgcattgcattgcattt 195293

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>ref|XM_446831.1| Candida glabrata CBS138, CAGL0H00737g partial mRNA
          Length = 3129

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 659 ctttcttctcagttgtttct 678
           ||||||||||||||||||||
Sbjct: 979 ctttcttctcagttgtttct 960

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>gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosome 5, complete sequence
          Length = 170182

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     cattgcattgcattgcattt 31
              ||||||||||||||||||||
Sbjct: 120299 cattgcattgcattgcattt 120318

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>emb|AL645728.31| Human DNA sequence from clone RP5-832C2 on chromosome 1 Contains the 3'
             end of a novel gene, two novel genes and four CpG islands,
             complete sequence
          Length = 87105

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    cattgcattgcattgcattt 31
             ||||||||||||||||||||
Sbjct: 77208 cattgcattgcattgcattt 77189

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>emb|AL391707.9| Human DNA sequence from clone RP11-166B18 on chromosome 10, complete
              sequence
          Length = 166826

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     acattgcattgcattgcatt 30
              ||||||||||||||||||||
Sbjct: 148756 acattgcattgcattgcatt 148737

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>emb|AL359205.15| Human DNA sequence from clone RP11-345N16 on chromosome 1 Contains a
              novel gene and the 3' end of a variant of novel gene
              (MGC22773), complete sequence
          Length = 169434

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    atgttttttctcatctactt 163
              ||||||||||||||||||||
Sbjct: 102858 atgttttttctcatctactt 102839

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>emb|AL137795.10| Human DNA sequence from clone RP5-1096P7 on chromosome 1p36.31-36.33
             Contains STSs and GSSs, complete sequence
          Length = 119806

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    acattgcattgcattgcatt 30
             ||||||||||||||||||||
Sbjct: 93003 acattgcattgcattgcatt 92984

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>gb|AC158307.5| Mus musculus chromosome 3, clone RP23-148J20, complete sequence
          Length = 204891

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     cattgcattgcattgcattt 31
              ||||||||||||||||||||
Sbjct: 106587 cattgcattgcattgcattt 106606



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     acattgcattgcattgcatt 30
              ||||||||||||||||||||
Sbjct: 106581 acattgcattgcattgcatt 106600

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>ref|XM_777880.1| PREDICTED: Strongylocentrotus purpuratus similar to sulfatase
          modifying factor 1 (LOC577665), mRNA
          Length = 1444

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 cattgcattgcattgcattt 31
          ||||||||||||||||||||
Sbjct: 68 cattgcattgcattgcattt 87

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>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence
          Length = 1050361

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 659   ctttcttctcagttgtttct 678
             ||||||||||||||||||||
Sbjct: 72776 ctttcttctcagttgtttct 72795

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>emb|AJ495788.1|OSA495788 Oryza sativa (japonica cultivar-group) partial mRNA for MYB19
           protein
          Length = 1160

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 ttgcgccacttatccttgag 422
           ||||||||||||||||||||
Sbjct: 29  ttgcgccacttatccttgag 10

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>dbj|AK124299.1| Homo sapiens cDNA FLJ42306 fis, clone TRACH2001646
          Length = 2684

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 661  ttcttctcagttgtttctat 680
            ||||||||||||||||||||
Sbjct: 1067 ttcttctcagttgtttctat 1048

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>emb|BX897656.9| Zebrafish DNA sequence from clone CH211-271K12, complete sequence
          Length = 141840

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 655    tctcctttcttctcagttgtttctatat 682
              ||||||||| ||||| ||||||||||||
Sbjct: 139902 tctcctttcgtctcacttgtttctatat 139929

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>emb|BX322600.13| Zebrafish DNA sequence from clone CH211-273N5, complete sequence
          Length = 22306

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   cattgcattgcattgcattt 31
            ||||||||||||||||||||
Sbjct: 7255 cattgcattgcattgcattt 7274

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>gb|AC155651.4| Mus musculus 6 BAC RP24-111E13 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 175599

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    gctgccaggttgccggcttg 269
              ||||||||||||||||||||
Sbjct: 105531 gctgccaggttgccggcttg 105512

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>gb|AC158664.5| Mus musculus 6 BAC RP23-24F17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 232894

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    gctgccaggttgccggcttg 269
              ||||||||||||||||||||
Sbjct: 161494 gctgccaggttgccggcttg 161513

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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 575     ttttcgtcttggcatcagtt 594
               ||||||||||||||||||||
Sbjct: 6103018 ttttcgtcttggcatcagtt 6102999

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>gb|AC073641.3| Homo sapiens BAC clone RP11-368E14 from 2, complete sequence
          Length = 197709

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 662   tcttctcagttgtttctata 681
             ||||||||||||||||||||
Sbjct: 57533 tcttctcagttgtttctata 57552

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>gb|AC013404.3| Homo sapiens BAC clone RP11-293L17 from 2, complete sequence
          Length = 52086

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   cacttatccttgagatccac 428
             ||||||||||||||||||||
Sbjct: 12211 cacttatccttgagatccac 12230

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>dbj|AP006527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0603H10
          Length = 137828

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 575    ttttcgtcttggcatcagtt 594
              ||||||||||||||||||||
Sbjct: 100592 ttttcgtcttggcatcagtt 100573

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>emb|BX469935.5| Zebrafish DNA sequence from clone CH211-244H1 in linkage group 21,
             complete sequence
          Length = 171507

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    acattgcattgcattgcatt 30
             ||||||||||||||||||||
Sbjct: 17100 acattgcattgcattgcatt 17119

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>dbj|AK103040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117F01, full
           insert sequence
          Length = 1718

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 ttgcgccacttatccttgag 422
           ||||||||||||||||||||
Sbjct: 497 ttgcgccacttatccttgag 478

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>emb|BX927259.8| Zebrafish DNA sequence from clone DKEY-257J24 in linkage group 22,
             complete sequence
          Length = 18652

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 655   tctcctttcttctcagttgtttctatat 682
             ||||||||| ||||| ||||||||||||
Sbjct: 18637 tctcctttcgtctcacttgtttctatat 18610

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>emb|AL132778.6|CNS01DTJ Human chromosome 14 DNA sequence BAC C-2568P8 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170125

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 661   ttcttctcagttgtttctat 680
             ||||||||||||||||||||
Sbjct: 11447 ttcttctcagttgtttctat 11428

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>emb|AL133162.4|CNS01DU5 Human chromosome 14 DNA sequence BAC C-2591A6 of library CalTech-D
            from chromosome 14 of Homo sapiens (Human), complete
            sequence
          Length = 196431

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    ggtgagatgacattgcattg 21
            ||||||||||||||||||||
Sbjct: 4854 ggtgagatgacattgcattg 4835

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>emb|CT009727.7| Zebrafish DNA sequence from clone CH73-40M17 in linkage group 22,
             complete sequence
          Length = 19538

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 655   tctcctttcttctcagttgtttctatat 682
             ||||||||| ||||| ||||||||||||
Sbjct: 12689 tctcctttcgtctcacttgtttctatat 12716

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>emb|BX323588.10| Zebrafish DNA sequence from clone DKEY-225F23 in linkage group 2,
            complete sequence
          Length = 248002

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   tttacattgcacatagagaa 69
            ||||||||||||||||||||
Sbjct: 5520 tttacattgcacatagagaa 5539

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>emb|BX324221.6| Mouse DNA sequence from clone RP23-395D17 on chromosome X, complete
             sequence
          Length = 42786

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 7     gatgacattgcattgcattgcatt 30
             ||||||| ||||||||||||||||
Sbjct: 33939 gatgacactgcattgcattgcatt 33916

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>gb|AY654741.1| Anguilla japonica cholesterol side-chain cleavage cytochrome P450
            (CYP11A1) mRNA, complete cds
          Length = 2828

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 642  catctctatatgctctcctt 661
            ||||||||||||||||||||
Sbjct: 1627 catctctatatgctctcctt 1608

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>emb|AL672074.19| Mouse DNA sequence from clone RP23-404I18 on chromosome X, complete
             sequence
          Length = 171593

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    acattgcattgcattgcatt 30
             ||||||||||||||||||||
Sbjct: 15740 acattgcattgcattgcatt 15759

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>emb|BX005173.7| Mouse DNA sequence from clone RP23-232O7 on chromosome X, complete
            sequence
          Length = 24999

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 11   acattgcattgcattgcatt 30
            ||||||||||||||||||||
Sbjct: 9260 acattgcattgcattgcatt 9241

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>emb|BX000353.8| Zebrafish DNA sequence from clone DKEY-147H15, complete sequence
          Length = 189040

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     attgcattgcattgcatttc 32
              ||||||||||||||||||||
Sbjct: 159224 attgcattgcattgcatttc 159243

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>gb|U67133.1|PCU67133 Petroselinum crispum DNA-binding protein PcMYB1 (PcMYB1) mRNA,
           allele c, complete cds
          Length = 1374

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 cgccacttatccttgagatc 425
           ||||||||||||||||||||
Sbjct: 383 cgccacttatccttgagatc 364

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>gb|U67132.1|PCU67132 Petroselinum crispum DNA-binding protein PcMYB1 (PcMYB1) mRNA,
           complete cds
          Length = 1387

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 cgccacttatccttgagatc 425
           ||||||||||||||||||||
Sbjct: 424 cgccacttatccttgagatc 405

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>emb|AL935164.6| Zebrafish DNA sequence from clone CH211-190N9, complete sequence
          Length = 170403

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     acattgcattgcattgcatt 30
              ||||||||||||||||||||
Sbjct: 158820 acattgcattgcattgcatt 158839

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>emb|AL691501.15| Mouse DNA sequence from clone RP23-220M11 on chromosome 4, complete
              sequence
          Length = 176069

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     cattgcattgcattgcattt 31
              ||||||||||||||||||||
Sbjct: 110194 cattgcattgcattgcattt 110175


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,332,238
Number of Sequences: 3902068
Number of extensions: 5332238
Number of successful extensions: 90604
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90099
Number of HSP's gapped (non-prelim): 467
length of query: 698
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 675
effective length of database: 17,143,297,704
effective search space: 11571725950200
effective search space used: 11571725950200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result