| Clone Name | rbags20f20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009272.1| Triticum aestivum clone wlk8.pk0011.e10:fis, full insert mRNA sequence Length = 1878 Score = 955 bits (482), Expect = 0.0 Identities = 543/562 (96%), Gaps = 1/562 (0%) Strand = Plus / Minus Query: 87 ttgctgttgaaacacagcagtgcttagttcttgtacttcatggtctctttctcgaatccg 146 ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 1624 ttgctgttgaaacacagcagttcttagttcttgtacttcatggtctccttctcgaatcca 1565 Query: 147 attgttgggaattgttttgcatattcctccacatcgtggcgaagctttgcaatttcagct 206 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1564 attgttgggaattgtttcgcatattcctccacatcgtggcgaagctttgcaatttcagct 1505 Query: 207 tggatgttgctgtcggattgcaaagtggcaacaaagtccttcagtttggtacctgctgct 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1504 tggatgttgctgtcggattgcaaagtggcaacaaagtccttcagtttggtacctgctgct 1445 Query: 267 gcagctttaaccttcaaagccaagttcactgccgaatcgaagaattcggcaaccttggcg 326 ||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||| Sbjct: 1444 gcagctttaaccttcaaggccaagttcactgccgaatcgaagaagtcagcaaccttggcg 1385 Query: 327 aagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccg 386 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1384 aagtcctcctcaacaaatcctcttgatgtaagtgcgggggttcccatcctgatgcctccg 1325 Query: 387 ggtaccatagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattt 446 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1324 ggtaccatagctgaaacatcaccaggaaccgtgttcttgtttgctgcaatatgcacattt 1265 Query: 447 tctaaaaccttctccactcttgaaccatctattccctttttcttgaggttcaccaaaact 506 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 1264 tctaaaaccttctccacacgtgaaccatctattccctttttcttgaggttcaccaaaact 1205 Query: 507 aaatggttatcagtcccaccagagacaatgtcgtagcctttggaagtcaaactctcagca 566 ||||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||||| Sbjct: 1204 aaatggttatcagtcccaccagaaacaatatcgtagccttttgaagttaagctctcagca 1145 Query: 567 aatctagcagagttgctcataacttgctcttgataagctcggtactcctggagtagttgc 626 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 1144 aatctagcagagttgctcataacttgctcttgataagctctgtactcct-gagtagttgc 1086 Query: 627 ctgcttaagcgcaacggccagg 648 ||||||||||||||| |||||| Sbjct: 1085 ctgcttaagcgcaactgccagg 1064
>ref|XM_469653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2052 Score = 620 bits (313), Expect = e-174 Identities = 479/533 (89%), Gaps = 1/533 (0%) Strand = Plus / Minus Query: 109 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 168 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1675 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1616 Query: 169 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 228 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1615 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1556 Query: 229 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 288 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1555 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1496 Query: 289 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 348 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 1495 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1436 Query: 349 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 408 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1435 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1376 Query: 409 caggaacagtgttcttgtttgctgcaatatgcacattttctaaaaccttctccactcttg 468 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 1375 caggaactgtgttcttgtttgctgcaatgtgcacgttttctaaaaccttctccactcttg 1316 Query: 469 aaccatctattccctttttcttgaggttcaccaaaactaaatggttatcagtcccaccag 528 |||||||||| ||||| ||||||| || ||||| ||||||||||| ||||||||||||| Sbjct: 1315 aaccatctatgcccttgctcttgagatttaccaacactaaatggttgtcagtcccaccag 1256 Query: 529 agacaatgtcgtagcctttggaagtcaaactctcagcaaatctagcagagttgctcataa 588 |||||| ||||||||||| | ||||| |||| |||||| | ||| |||| ||||||| Sbjct: 1255 agacaagttcgtagccttttgctgtcaagctctgtgcaaattttgcacagttactcataa 1196 Query: 589 cttgctcttgataagctcggtactcctggagtagttgcctgcttaagcgcaac 641 |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 1195 cttgctcttgataagctctgtactcc-ggagtagttgcctgcttaagcgcaac 1144
>dbj|AK119226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H12, full insert sequence Length = 1923 Score = 620 bits (313), Expect = e-174 Identities = 479/533 (89%), Gaps = 1/533 (0%) Strand = Plus / Minus Query: 109 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 168 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1598 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1539 Query: 169 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 228 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1538 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1479 Query: 229 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 288 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1478 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1419 Query: 289 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 348 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 1418 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1359 Query: 349 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 408 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1358 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1299 Query: 409 caggaacagtgttcttgtttgctgcaatatgcacattttctaaaaccttctccactcttg 468 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 1298 caggaactgtgttcttgtttgctgcaatgtgcacgttttctaaaaccttctccactcttg 1239 Query: 469 aaccatctattccctttttcttgaggttcaccaaaactaaatggttatcagtcccaccag 528 |||||||||| ||||| ||||||| || ||||| ||||||||||| ||||||||||||| Sbjct: 1238 aaccatctatgcccttgctcttgagatttaccaacactaaatggttgtcagtcccaccag 1179 Query: 529 agacaatgtcgtagcctttggaagtcaaactctcagcaaatctagcagagttgctcataa 588 |||||| ||||||||||| | ||||| |||| |||||| | ||| |||| ||||||| Sbjct: 1178 agacaagttcgtagccttttgctgtcaagctctgtgcaaattttgcacagttactcataa 1119 Query: 589 cttgctcttgataagctcggtactcctggagtagttgcctgcttaagcgcaac 641 |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 1118 cttgctcttgataagctctgtactcc-ggagtagttgcctgcttaagcgcaac 1067
>dbj|AK100404.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086P20, full insert sequence Length = 1976 Score = 620 bits (313), Expect = e-174 Identities = 479/533 (89%), Gaps = 1/533 (0%) Strand = Plus / Minus Query: 109 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 168 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1599 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1540 Query: 169 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 228 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1539 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1480 Query: 229 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 288 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1479 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1420 Query: 289 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 348 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 1419 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1360 Query: 349 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 408 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1359 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1300 Query: 409 caggaacagtgttcttgtttgctgcaatatgcacattttctaaaaccttctccactcttg 468 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 1299 caggaactgtgttcttgtttgctgcaatgtgcacgttttctaaaaccttctccactcttg 1240 Query: 469 aaccatctattccctttttcttgaggttcaccaaaactaaatggttatcagtcccaccag 528 |||||||||| ||||| ||||||| || ||||| ||||||||||| ||||||||||||| Sbjct: 1239 aaccatctatgcccttgctcttgagatttaccaacactaaatggttgtcagtcccaccag 1180 Query: 529 agacaatgtcgtagcctttggaagtcaaactctcagcaaatctagcagagttgctcataa 588 |||||| ||||||||||| | ||||| |||| |||||| | ||| |||| ||||||| Sbjct: 1179 agacaagttcgtagccttttgctgtcaagctctgtgcaaattttgcacagttactcataa 1120 Query: 589 cttgctcttgataagctcggtactcctggagtagttgcctgcttaagcgcaac 641 |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 1119 cttgctcttgataagctctgtactcc-ggagtagttgcctgcttaagcgcaac 1068
>dbj|AK060674.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A01, full insert sequence Length = 1844 Score = 620 bits (313), Expect = e-174 Identities = 479/533 (89%), Gaps = 1/533 (0%) Strand = Plus / Minus Query: 109 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 168 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1591 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1532 Query: 169 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 228 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1531 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1472 Query: 229 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 288 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1471 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1412 Query: 289 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 348 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 1411 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1352 Query: 349 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 408 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1351 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1292 Query: 409 caggaacagtgttcttgtttgctgcaatatgcacattttctaaaaccttctccactcttg 468 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 1291 caggaactgtgttcttgtttgctgcaatgtgcacgttttctaaaaccttctccactcttg 1232 Query: 469 aaccatctattccctttttcttgaggttcaccaaaactaaatggttatcagtcccaccag 528 |||||||||| ||||| ||||||| || ||||| ||||||||||| ||||||||||||| Sbjct: 1231 aaccatctatgcccttgctcttgagatttaccaacactaaatggttgtcagtcccaccag 1172 Query: 529 agacaatgtcgtagcctttggaagtcaaactctcagcaaatctagcagagttgctcataa 588 |||||| ||||||||||| | ||||| |||| |||||| | ||| |||| ||||||| Sbjct: 1171 agacaagttcgtagccttttgctgtcaagctctgtgcaaattttgcacagttactcataa 1112 Query: 589 cttgctcttgataagctcggtactcctggagtagttgcctgcttaagcgcaac 641 |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 1111 cttgctcttgataagctctgtactcc-ggagtagttgcctgcttaagcgcaac 1060
>dbj|AK061913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A08, full insert sequence Length = 1402 Score = 613 bits (309), Expect = e-172 Identities = 478/533 (89%), Gaps = 1/533 (0%) Strand = Plus / Minus Query: 109 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 168 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1128 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1069 Query: 169 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 228 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1068 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1009 Query: 229 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 288 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1008 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 949 Query: 289 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 348 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 948 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 889 Query: 349 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 408 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 888 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 829 Query: 409 caggaacagtgttcttgtttgctgcaatatgcacattttctaaaaccttctccactcttg 468 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 828 caggaactgtgttcttgtttgctgcaatgtgcacgttttctaaaaccttctccactcttg 769 Query: 469 aaccatctattccctttttcttgaggttcaccaaaactaaatggttatcagtcccaccag 528 |||||||||| ||||| ||||||| || ||||| ||||||||||| ||||||||||||| Sbjct: 768 aaccatctatgcccttgctcttgagatttaccaacactaaatggttgtcagtcccaccag 709 Query: 529 agacaatgtcgtagcctttggaagtcaaactctcagcaaatctagcagagttgctcataa 588 || ||| ||||||||||| | ||||| |||| |||||| | ||| |||| ||||||| Sbjct: 708 aggcaagttcgtagccttttgctgtcaagctctgtgcaaattttgcacagttactcataa 649 Query: 589 cttgctcttgataagctcggtactcctggagtagttgcctgcttaagcgcaac 641 |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 648 cttgctcttgataagctctgtactcc-ggagtagttgcctgcttaagcgcaac 597
>gb|AY105738.1| Zea mays PCO070960 mRNA sequence Length = 1476 Score = 476 bits (240), Expect = e-131 Identities = 467/540 (86%), Gaps = 7/540 (1%) Strand = Plus / Minus Query: 110 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcata 169 |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| | Sbjct: 1231 ttagttcttgtatttcatggtctctttctcaaatccaattgttgggaattgttttgcaaa 1172 Query: 170 ttcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgcaa 229 |||||| ||||| ||||||||||||||||| ||| |||||||| || || |||||||| Sbjct: 1171 ttcctctacatcatggcgaagctttgcaatctcaacttggatg---ctatcagattgcaa 1115 Query: 230 agtggcaacaaagtccttcagtttggt---acctgctgctgcagctttaaccttcaaagc 286 ||||||||||||||||||||| || || ||||| | |||||| |||| |||||| || Sbjct: 1114 agtggcaacaaagtccttcagctttgttccacctgtcgttgcagccttaatcttcaaggc 1055 Query: 287 caagttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcc 346 || |||||||| | ||||||||| || ||||| || ||||| || || ||||||||||| Sbjct: 1054 cagattcactgctgcatcgaagaagtcagcaactttagcgaaatcttcttcaacaaatcc 995 Query: 347 tcttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatc 406 ||| || ||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 994 tctcgacgtaagggctggggttcccatcctgatgcctcctggcaccatagctgaaacatc 935 Query: 407 accaggaacagtgttcttgtttgctgcaatatgcacattttctaaaaccttctccactct 466 ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 934 accaggaactgtgttcttgtttgctgcaatatgcacactttctaaaaccttctccaccct 875 Query: 467 tgaaccatctattccctttttcttgaggttcaccaaaactaaatggttatcagtcccacc 526 |||||||||||| ||||| |||||||| ||||||| |||||||||||| ||||||||||| Sbjct: 874 tgaaccatctatccccttattcttgagattcaccagaactaaatggttgtcagtcccacc 815 Query: 527 agagacaatgtcgtagcctttggaagtcaaactctcagcaaatctagcagagttgctcat 586 ||||| | || || ||||| ||| ||| |||| |||||| ||||| | || || || Sbjct: 814 ggagacgagttcatatccttttgaaatcaggctctgcgcaaatttagcacaattactgat 755 Query: 587 aacttgctcttgataagctcggtactcctggagtagttgcctgcttaagcgcaacggcca 646 |||||||||||| ||||||| ||| | |||||||||||||||| || |||||||| |||| Sbjct: 754 aacttgctcttggtaagctctgta-ttctggagtagttgcctgtttgagcgcaacagcca 696
>gb|AF439728.1|AF439728 Zea mays serine hydroxymethyltransferase mRNA, partial cds Length = 1028 Score = 293 bits (148), Expect = 4e-76 Identities = 251/284 (88%), Gaps = 1/284 (0%) Strand = Plus / Minus Query: 363 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 422 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 1025 ggggttcccatcctgatgcctcctggcaccatagctgaaacatcaccaggaactgtgttc 966 Query: 423 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 482 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||| Sbjct: 965 ttgtttgctgcaatatgcacactttctaaaaccttctccacccttgaaccatctatcccc 906 Query: 483 tttttcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaatgtcgtag 542 || |||||||| ||||||| |||||||||||| ||||||||||||||||| | || || Sbjct: 905 ttattcttgagattcaccagaactaaatggttgtcagtcccaccagagacgagttcatat 846 Query: 543 cctttggaagtcaaactctcagcaaatctagcagagttgctcataacttgctcttgataa 602 ||||| ||| ||| |||| |||||| ||||| | || || |||||||||||||| ||| Sbjct: 845 ccttttgaaatcaggctctgcgcaaatttagcacaattactgataacttgctcttggtaa 786 Query: 603 gctcggtactcctggagtagttgcctgcttaagcgcaacggcca 646 |||| ||| | |||||||||||||||| || |||||||| |||| Sbjct: 785 gctctgta-ttctggagtagttgcctgtttgagcgcaacagcca 743
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 188 bits (95), Expect = 2e-44 Identities = 110/115 (95%) Strand = Plus / Minus Query: 369 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 428 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 30010834 cccatcctgatgcctcctggtaccatagctgaaacatcaccaggaactgtgttcttgttt 30010775 Query: 429 gctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccct 483 |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 30010774 gctgcaatgtgcacgttttctaaaaccttctccactcttgaaccatctatgccct 30010720 Score = 176 bits (89), Expect = 6e-41 Identities = 131/145 (90%) Strand = Plus / Minus Query: 109 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 168 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 30011320 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 30011261 Query: 169 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 228 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 30011260 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 30011201 Query: 229 aagtggcaacaaagtccttcagttt 253 ||||||||||||||||||||||||| Sbjct: 30011200 aagtggcaacaaagtccttcagttt 30011176 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Minus Query: 262 ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaagaattcggcaacct 321 |||||||||| |||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 30011026 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaagaaatcagcaacct 30010967 Query: 322 tggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcc 370 | || |||||||||||||||||||||||||| || || || |||||||| Sbjct: 30010966 tagcaaagtcctcctcaacaaatcctcttgaggtcagtgctggggttcc 30010918 Score = 75.8 bits (38), Expect = 2e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 564 gcaaatctagcagagttgctcataacttgctcttgataagctcggtactcctggagtagt 623 |||||| | ||| |||| ||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 30010174 gcaaattttgcacagttactcataacttgctcttgataagctctgtactcc-ggagtagt 30010116 Query: 624 tgcctg 629 |||||| Sbjct: 30010115 tgcctg 30010110 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 487 tcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaatgtcgtagcctt 546 ||||||| || ||||| ||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 30010458 tcttgagatttaccaacactaaatggttgtcagtcccaccagagacaagttcgtagcctt 30010399 Query: 547 t 547 | Sbjct: 30010398 t 30010398
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 188 bits (95), Expect = 2e-44 Identities = 110/115 (95%) Strand = Plus / Plus Query: 369 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 428 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 96917 cccatcctgatgcctcctggtaccatagctgaaacatcaccaggaactgtgttcttgttt 96976 Query: 429 gctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccct 483 |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 96977 gctgcaatgtgcacgttttctaaaaccttctccactcttgaaccatctatgccct 97031 Score = 176 bits (89), Expect = 6e-41 Identities = 131/145 (90%) Strand = Plus / Plus Query: 109 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 168 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 96431 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 96490 Query: 169 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 228 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 96491 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 96550 Query: 229 aagtggcaacaaagtccttcagttt 253 ||||||||||||||||||||||||| Sbjct: 96551 aagtggcaacaaagtccttcagttt 96575 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 262 ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaagaattcggcaacct 321 |||||||||| |||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 96725 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaagaaatcagcaacct 96784 Query: 322 tggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcc 370 | || |||||||||||||||||||||||||| || || || |||||||| Sbjct: 96785 tagcaaagtcctcctcaacaaatcctcttgaggtcagtgctggggttcc 96833 Score = 75.8 bits (38), Expect = 2e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 564 gcaaatctagcagagttgctcataacttgctcttgataagctcggtactcctggagtagt 623 |||||| | ||| |||| ||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 97577 gcaaattttgcacagttactcataacttgctcttgataagctctgtactcc-ggagtagt 97635 Query: 624 tgcctg 629 |||||| Sbjct: 97636 tgcctg 97641 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 487 tcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaatgtcgtagcctt 546 ||||||| || ||||| ||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 97293 tcttgagatttaccaacactaaatggttgtcagtcccaccagagacaagttcgtagcctt 97352 Query: 547 t 547 | Sbjct: 97353 t 97353
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 188 bits (95), Expect = 2e-44 Identities = 110/115 (95%) Strand = Plus / Minus Query: 369 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 428 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 30102256 cccatcctgatgcctcctggtaccatagctgaaacatcaccaggaactgtgttcttgttt 30102197 Query: 429 gctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccct 483 |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 30102196 gctgcaatgtgcacgttttctaaaaccttctccactcttgaaccatctatgccct 30102142 Score = 176 bits (89), Expect = 6e-41 Identities = 131/145 (90%) Strand = Plus / Minus Query: 109 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 168 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 30102742 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 30102683 Query: 169 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 228 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 30102682 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 30102623 Query: 229 aagtggcaacaaagtccttcagttt 253 ||||||||||||||||||||||||| Sbjct: 30102622 aagtggcaacaaagtccttcagttt 30102598 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Minus Query: 262 ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaagaattcggcaacct 321 |||||||||| |||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 30102448 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaagaaatcagcaacct 30102389 Query: 322 tggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcc 370 | || |||||||||||||||||||||||||| || || || |||||||| Sbjct: 30102388 tagcaaagtcctcctcaacaaatcctcttgaggtcagtgctggggttcc 30102340 Score = 75.8 bits (38), Expect = 2e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 564 gcaaatctagcagagttgctcataacttgctcttgataagctcggtactcctggagtagt 623 |||||| | ||| |||| ||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 30101596 gcaaattttgcacagttactcataacttgctcttgataagctctgtactcc-ggagtagt 30101538 Query: 624 tgcctg 629 |||||| Sbjct: 30101537 tgcctg 30101532 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 487 tcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaatgtcgtagcctt 546 ||||||| || ||||| ||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 30101880 tcttgagatttaccaacactaaatggttgtcagtcccaccagagacaagttcgtagcctt 30101821 Query: 547 t 547 | Sbjct: 30101820 t 30101820
>ref|NM_180750.1| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.2 mRNA, complete cds Length = 1966 Score = 168 bits (85), Expect = 1e-38 Identities = 169/197 (85%) Strand = Plus / Minus Query: 333 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 392 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1483 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1424 Query: 393 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 452 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1423 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1364 Query: 453 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 512 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1363 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1304 Query: 513 ttatcagtcccaccaga 529 |||||||| || ||||| Sbjct: 1303 ttatcagtgcctccaga 1287 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 124 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 172 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1692 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1644
>ref|NM_122560.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.3 mRNA, complete cds Length = 2072 Score = 168 bits (85), Expect = 1e-38 Identities = 169/197 (85%) Strand = Plus / Minus Query: 333 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 392 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1483 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1424 Query: 393 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 452 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1423 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1364 Query: 453 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 512 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1363 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1304 Query: 513 ttatcagtcccaccaga 529 |||||||| || ||||| Sbjct: 1303 ttatcagtgcctccaga 1287 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 124 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 172 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1692 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1644
>ref|NM_180749.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.1 mRNA, complete cds Length = 1962 Score = 168 bits (85), Expect = 1e-38 Identities = 169/197 (85%) Strand = Plus / Minus Query: 333 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 392 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1435 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1376 Query: 393 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 452 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1375 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1316 Query: 453 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 512 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1315 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1256 Query: 513 ttatcagtcccaccaga 529 |||||||| || ||||| Sbjct: 1255 ttatcagtgcctccaga 1239 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 124 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 172 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1644 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1596
>gb|BT001097.1| Arabidopsis thaliana clone C104687 (D) putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1633 Score = 168 bits (85), Expect = 1e-38 Identities = 169/197 (85%) Strand = Plus / Minus Query: 333 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 392 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1379 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1320 Query: 393 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 452 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1319 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1260 Query: 453 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 512 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1259 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1200 Query: 513 ttatcagtcccaccaga 529 |||||||| || ||||| Sbjct: 1199 ttatcagtgcctccaga 1183 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 124 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 172 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1588 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1540
>dbj|AK220785.1| Arabidopsis thaliana mRNA for glycine hydroxymethyltransferase -like protein, complete cds, clone: RAFL22-26-M08 Length = 909 Score = 168 bits (85), Expect = 1e-38 Identities = 169/197 (85%) Strand = Plus / Minus Query: 333 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 392 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 343 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 284 Query: 393 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 452 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 283 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 224 Query: 453 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 512 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 223 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 164 Query: 513 ttatcagtcccaccaga 529 |||||||| || ||||| Sbjct: 163 ttatcagtgcctccaga 147 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 124 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 172 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 552 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 504
>emb|BX830710.1|CNS09YQU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1960 Score = 168 bits (85), Expect = 1e-38 Identities = 169/197 (85%) Strand = Plus / Minus Query: 333 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 392 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1429 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1370 Query: 393 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 452 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1369 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1310 Query: 453 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 512 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1309 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1250 Query: 513 ttatcagtcccaccaga 529 |||||||| || ||||| Sbjct: 1249 ttatcagtgcctccaga 1233 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 124 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 172 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1639 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1591
>gb|BT001113.1| Arabidopsis thaliana clone C104687 (D) putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1633 Score = 168 bits (85), Expect = 1e-38 Identities = 169/197 (85%) Strand = Plus / Minus Query: 333 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 392 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1379 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1320 Query: 393 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 452 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1319 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1260 Query: 453 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 512 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1259 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1200 Query: 513 ttatcagtcccaccaga 529 |||||||| || ||||| Sbjct: 1199 ttatcagtgcctccaga 1183 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 124 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 172 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1588 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1540
>gb|AY035117.1| Arabidopsis thaliana putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1933 Score = 161 bits (81), Expect = 4e-36 Identities = 168/197 (85%) Strand = Plus / Minus Query: 333 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 392 ||||||| |||||||||||||| || || || |||||||| |||||| ||||| ||| Sbjct: 1434 tcctcaatgaatcctcttgatgtgagggctggtgttcccatatggatgccaccgggaacc 1375 Query: 393 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 452 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1374 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1315 Query: 453 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 512 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1314 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1255 Query: 513 ttatcagtcccaccaga 529 |||||||| || ||||| Sbjct: 1254 ttatcagtgcctccaga 1238 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 124 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 172 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1643 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1595
>gb|M87649.1|PEASHMTA Pisum sativum serine hydroxymethyltransferase mRNA, complete cds Length = 1803 Score = 133 bits (67), Expect = 8e-28 Identities = 184/223 (82%) Strand = Plus / Minus Query: 325 cgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctc 384 |||| ||||||||||||||||| ||||| |||||||| || ||||||||||||||||| | Sbjct: 1363 cgaaatcctcctcaacaaatccccttgaagtaagcgcaggagttcccatcctgatgccac 1304 Query: 385 cgggtaccatagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacat 444 | || |||||||| || ||||| || ||||| ||||| || || || |||||||| || Sbjct: 1303 caggaaccatagcagacacatctcctggaactgtgtttttattagcagcaatatgtacta 1244 Query: 445 tttctaaaaccttctccactcttgaaccatctattccctttttcttgaggttcaccaaaa 504 ||| || || ||||| ||||| || ||||| || ||||| ||||| || |||||||||| Sbjct: 1243 attccaacactttctcaactctggacccatcaatacccttgttcttcagattcaccaaaa 1184 Query: 505 ctaaatggttatcagtcccaccagagacaatgtcgtagccttt 547 ||||||| || ||||||||||| || |||| || |||||||| Sbjct: 1183 ctaaatgattctcagtcccaccggaaacaagatcatagccttt 1141 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 117 ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcc 176 |||||||||||||| |||| || || || || ||||| |||||||||||| | ||||| Sbjct: 1571 ttgtacttcatggttgctttttcaaaaccaatggttggaaattgttttgcaaactcctca 1512 Query: 177 acatc 181 ||||| Sbjct: 1511 acatc 1507
>gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete sequence Length = 110946 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 377 gatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgtttgctgcaat 436 |||||| ||||| ||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 22521 gatgccaccgggaaccatggcagaaacatcaccaggaacagtattcttgtttgctgcaat 22462 Query: 437 atgcacattttctaaaaccttctccactcttgaaccatctattccct 483 ||| || |||||| || || ||||||||||| ||||||||||||| Sbjct: 22461 atgtactaattctaatactttttccactcttgatccatctattccct 22415 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 124 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 172 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 23145 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 23097 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 495 ttcaccaaaactaaatggttatcagtcccaccaga 529 ||||||||||||||||| |||||||| || ||||| Sbjct: 22075 ttcaccaaaactaaatgattatcagtgcctccaga 22041
>emb|Z25860.1|FPGHMT2 Flaveria pringlei mRNA for glycine hydroxymethyltransferase Length = 1779 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 112 agttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatatt 171 |||| ||||| |||||||| |||||||| || |||||||||||||||||||| ||||| | Sbjct: 1576 agtttttgtatttcatggtttctttctcaaacccgattgttgggaattgtttggcatact 1517 Query: 172 cctccacatcgtggcgaagctttgcaatttc 202 ||||||| |||||||| ||||||| |||||| Sbjct: 1516 cctccacgtcgtggcgtagctttgaaatttc 1486 Score = 97.6 bits (49), Expect = 4e-17 Identities = 133/161 (82%) Strand = Plus / Minus Query: 330 tcctcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggt 389 ||||| ||||||||||| || || || || || ||||||||||| |||||||| || || Sbjct: 1361 tcctcttcaacaaatcccctagaagtgagagcaggggttcccattctgatgccaccagga 1302 Query: 390 accatagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttct 449 ||||| || || |||||||||||||||||||| || || |||||||| || ||| ||| Sbjct: 1301 accatggcagacacatcaccaggaacagtgtttttattggctgcaatgtgaacagcttcc 1242 Query: 450 aaaaccttctccactcttgaaccatctattccctttttctt 490 || ||||| || || ||||||||||| |||||||| ||||| Sbjct: 1241 aacaccttttcaacccttgaaccatcaattcccttattctt 1201
>emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxymethyltransferase Length = 1746 Score = 97.6 bits (49), Expect = 4e-17 Identities = 178/221 (80%) Strand = Plus / Minus Query: 314 ggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcccat 373 |||||| || || |||||||| ||||||||||| || || || || || ||||||||||| Sbjct: 1386 ggcaactttagcaaagtcctcttcaacaaatcccctagaggtgagagcaggggttcccat 1327 Query: 374 cctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgtttgctgc 433 |||||||| || || ||||| || || |||||||||||||||||||| || || ||||| Sbjct: 1326 tctgatgccaccaggaaccatggcagagacatcaccaggaacagtgtttttattggctgc 1267 Query: 434 aatatgcacattttctaaaaccttctccactcttgaaccatctattccctttttcttgag 493 ||| || ||| || || ||||| || || |||||||||| |||||||| || || | Sbjct: 1266 aatgtgaacagcctccaacaccttttcaacctttgaaccatcaattcccttatttttcaa 1207 Query: 494 gttcaccaaaactaaatggttatcagtcccaccagagacaa 534 || ||||||||||| ||||| || || |||||||| |||| Sbjct: 1206 attaaccaaaactaagtggttctctgttccaccagaaacaa 1166 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 109 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 168 ||||||| ||||| |||||||| |||||||| ||||||||||| ||||||||||| || | Sbjct: 1588 cttagtttttgtatttcatggtttctttctcaaatccgattgtcgggaattgtttcgcgt 1529 Query: 169 attcctccacatcgtggcgaagctttgcaatttcagcttggatg 212 |||||||||| || ||||| ||||||| ||||| | ||||||| Sbjct: 1528 attcctccacgtcatggcgtagctttgagatttctgattggatg 1485
>gb|DQ139269.1| Medicago truncatula serine hydroxymethyltransferase mRNA, complete cds Length = 1524 Score = 87.7 bits (44), Expect = 4e-14 Identities = 175/216 (81%), Gaps = 2/216 (0%) Strand = Plus / Minus Query: 333 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 392 ||||||||||| || || |||||||| || || |||||||| ||||| ||||| || ||| Sbjct: 1301 tcctcaacaaaacccctagatgtaagagcaggagttcccattctgatccctccaggaacc 1242 Query: 393 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 452 || || || ||||| || ||||||||||| || || || || ||||| || |||||| Sbjct: 1241 attgcagacacatctcctggaacagtgtttttattggcagctatatgaactgattctaac 1182 Query: 453 accttctccactcttgaaccatctattccctt-tttcttgaggttcaccaaaactaaatg 511 |||||||| || ||||||||||| || ||||| |||||| | ||| ||||| || ||||| Sbjct: 1181 accttctcaacccttgaaccatcaatgcccttgtttctt-aagtttaccaacaccaaatg 1123 Query: 512 gttatcagtcccaccagagacaatgtcgtagccttt 547 ||| ||||| ||||| || |||| ||| |||||||| Sbjct: 1122 gttctcagttccacccgatacaaggtcatagccttt 1087
>gb|BT013569.1| Lycopersicon esculentum clone 132307R, mRNA sequence Length = 1923 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Minus Query: 330 tcctcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggt 389 |||||||||||||| ||||| || || || || ||||| ||||| | ||||| || ||| Sbjct: 1376 tcctcctcaacaaaacctctagaagtgagagctggggtgcccatgcgaatgccaccaggt 1317 Query: 390 accatagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttct 449 ||||| || || ||||||||||| ||||| ||||| || |||||||||||||| ||| Sbjct: 1316 accatggcagatacatcaccaggcacagtattcttattggctgcaatatgcaccgactct 1257 Query: 450 aaaaccttctccactcttgaaccatctattccctt 484 ||||||||||| ||||| || ||||| || ||||| Sbjct: 1256 aaaaccttctcaactctagatccatcaataccctt 1222 Score = 44.1 bits (22), Expect = 0.57 Identities = 52/62 (83%) Strand = Plus / Minus Query: 114 ttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcc 173 |||||||| ||||| || ||||||||||| || | || ||||||||||| ||||| ||| Sbjct: 1592 ttcttgtatttcattgtttctttctcgaaaccaacagtagggaattgtttggcatagtcc 1533 Query: 174 tc 175 || Sbjct: 1532 tc 1531
>emb|Z25863.1|STGHMT S.tuberosum mRNA for glycine hydroxymethyltransferase Length = 1745 Score = 81.8 bits (41), Expect = 3e-12 Identities = 137/169 (81%) Strand = Plus / Minus Query: 366 gttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttg 425 |||||||| |||||||| || || ||||| || || ||||| |||||||| ||||||||| Sbjct: 1306 gttcccattctgatgccaccagggaccatggcagatacatctccaggaacggtgttcttg 1247 Query: 426 tttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattcccttt 485 || ||||||||||| ||| ||| || || || || || || |||||||| || ||||| Sbjct: 1246 ttggctgcaatatgtacagcttccaagactttttcaaccctggaaccatcaatacccttg 1187 Query: 486 ttcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaa 534 || || | |||||||||||| || || ||||| || || |||||||||| Sbjct: 1186 tttttcatgttcaccaaaaccaagtgattatcggttcctccagagacaa 1138 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 109 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 168 ||||||| |||||||||||||| |||||||| || || ||||| ||||| || || |||| Sbjct: 1563 cttagtttttgtacttcatggtttctttctcaaacccaattgtagggaactgcttagcat 1504 Query: 169 attcctccacatcgtggcgaagctttgcaatttcag 204 | ||||||||||| || || || ||||||||||||| Sbjct: 1503 actcctccacatcatgacggagttttgcaatttcag 1468 Score = 44.1 bits (22), Expect = 0.57 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 576 gagttgctcataacttgctcttgataagctcggtactcctggagtagttgcctg 629 |||||||| | |||||||||||| ||||||| ||| | |||||||||| ||||| Sbjct: 1096 gagttgctgagaacttgctcttggtaagctctgta-ttctggagtagtggcctg 1044
>ref|NM_119954.2| Arabidopsis thaliana SHM1 (SERINE HYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase AT4G37930 (SHM1) mRNA, complete cds Length = 1822 Score = 79.8 bits (40), Expect = 1e-11 Identities = 184/232 (79%) Strand = Plus / Minus Query: 303 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 362 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1484 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1425 Query: 363 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 422 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1424 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1365 Query: 423 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 482 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1364 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1305 Query: 483 tttttcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaa 534 || ||| || ||||| | ||| | |||||| ||||| |||||||| |||| Sbjct: 1304 ttgggctttagattcactagaaccagatggttgtcagttccaccagaaacaa 1253 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 110 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 157 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1677 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1630
>emb|AJ271726.1|ATH271726 Arabidopsis thaliana mRNA for serine hydroxymethyl transferase (shm1 gene) Length = 1797 Score = 79.8 bits (40), Expect = 1e-11 Identities = 184/232 (79%) Strand = Plus / Minus Query: 303 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 362 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1460 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1401 Query: 363 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 422 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1400 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1341 Query: 423 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 482 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1340 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1281 Query: 483 tttttcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaa 534 || ||| || ||||| | ||| | |||||| ||||| |||||||| |||| Sbjct: 1280 ttgggctttagattcactagaaccagatggttgtcagttccaccagaaacaa 1229 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 110 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 157 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1653 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1606
>gb|AY070726.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1775 Score = 79.8 bits (40), Expect = 1e-11 Identities = 184/232 (79%) Strand = Plus / Minus Query: 303 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 362 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1468 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1409 Query: 363 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 422 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1408 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1349 Query: 423 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 482 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1348 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1289 Query: 483 tttttcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaa 534 || ||| || ||||| | ||| | |||||| ||||| |||||||| |||| Sbjct: 1288 ttgggctttagattcactagaaccagatggttgtcagttccaccagaaacaa 1237 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 110 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 157 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1661 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1614
>gb|AY057645.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1716 Score = 79.8 bits (40), Expect = 1e-11 Identities = 184/232 (79%) Strand = Plus / Minus Query: 303 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 362 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1414 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1355 Query: 363 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 422 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1354 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1295 Query: 423 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 482 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1294 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1235 Query: 483 tttttcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaa 534 || ||| || ||||| | ||| | |||||| ||||| |||||||| |||| Sbjct: 1234 ttgggctttagattcactagaaccagatggttgtcagttccaccagaaacaa 1183 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 110 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 157 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1607 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1560
>gb|AF428388.1|AF428388 Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1730 Score = 79.8 bits (40), Expect = 1e-11 Identities = 184/232 (79%) Strand = Plus / Minus Query: 303 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 362 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1415 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1356 Query: 363 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 422 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1355 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1296 Query: 423 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 482 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1295 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1236 Query: 483 tttttcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaa 534 || ||| || ||||| | ||| | |||||| ||||| |||||||| |||| Sbjct: 1235 ttgggctttagattcactagaaccagatggttgtcagttccaccagaaacaa 1184 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 110 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 157 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1608 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1561
>gb|AY054254.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1770 Score = 79.8 bits (40), Expect = 1e-11 Identities = 184/232 (79%) Strand = Plus / Minus Query: 303 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 362 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1468 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1409 Query: 363 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 422 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1408 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1349 Query: 423 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 482 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1348 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1289 Query: 483 tttttcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaa 534 || ||| || ||||| | ||| | |||||| ||||| |||||||| |||| Sbjct: 1288 ttgggctttagattcactagaaccagatggttgtcagttccaccagaaacaa 1237 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 110 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 157 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1661 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1614
>gb|BT006353.1| Arabidopsis thaliana At4g37930/F20D10_50 gene, complete cds Length = 1554 Score = 79.8 bits (40), Expect = 1e-11 Identities = 184/232 (79%) Strand = Plus / Minus Query: 303 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 362 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1361 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1302 Query: 363 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 422 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1301 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1242 Query: 423 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 482 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1241 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1182 Query: 483 tttttcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaa 534 || ||| || ||||| | ||| | |||||| ||||| |||||||| |||| Sbjct: 1181 ttgggctttagattcactagaaccagatggttgtcagttccaccagaaacaa 1130 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 110 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 157 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1554 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1507
>emb|BX828432.1|CNS0A3VV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZH08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1771 Score = 79.8 bits (40), Expect = 1e-11 Identities = 184/232 (79%) Strand = Plus / Minus Query: 303 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 362 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1457 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1398 Query: 363 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 422 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1397 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1338 Query: 423 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 482 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1337 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1278 Query: 483 tttttcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaa 534 || ||| || ||||| | ||| | |||||| ||||| |||||||| |||| Sbjct: 1277 ttgggctttagattcactagaaccagatggttgtcagttccaccagaaacaa 1226 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 110 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 157 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1650 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1603
>gb|AY089107.1| Arabidopsis thaliana clone 33799 mRNA, complete sequence Length = 1725 Score = 79.8 bits (40), Expect = 1e-11 Identities = 184/232 (79%) Strand = Plus / Minus Query: 303 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 362 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1423 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1364 Query: 363 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 422 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1363 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1304 Query: 423 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 482 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1303 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1244 Query: 483 tttttcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaa 534 || ||| || ||||| | ||| | |||||| ||||| |||||||| |||| Sbjct: 1243 ttgggctttagattcactagaaccagatggttgtcagttccaccagaaacaa 1192 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 110 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 157 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1616 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1569
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 75.8 bits (38), Expect = 2e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 564 gcaaatctagcagagttgctcataacttgctcttgataagctcggtactcctggagtagt 623 |||||| | ||| |||| ||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 432 gcaaattttgcacagttactcataacttgctcttgataagctctgtactcc-ggagtagt 490 Query: 624 tgcctg 629 |||||| Sbjct: 491 tgcctg 496 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 487 tcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaatgtcgtagcctt 546 ||||||| || ||||| ||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 148 tcttgagatttaccaacactaaatggttgtcagtcccaccagagacaagttcgtagcctt 207 Query: 547 t 547 | Sbjct: 208 t 208
>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88 Length = 198493 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 110 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 157 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 134324 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 134371 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 369 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 428 ||||| ||||| || || || ||||| || |||||||| |||||||||||||| ||||| Sbjct: 134747 cccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgtttttgttg 134806 Query: 429 gctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccct 483 | |||||| || ||| ||| || || ||||| ||||| || ||||| ||||||| Sbjct: 134807 gatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccct 134861
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project) Length = 147215 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 110 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 157 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 19909 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 19956 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 369 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 428 ||||| ||||| || || || ||||| || |||||||| |||||||||||||| ||||| Sbjct: 20332 cccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgtttttgttg 20391 Query: 429 gctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccct 483 | |||||| || ||| ||| || || ||||| ||||| || ||||| ||||||| Sbjct: 20392 gatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccct 20446
>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557 Length = 87695 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 117 ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcc 176 ||||||||||| || | ||||| || || || ||||| || ||||| ||||| ||||| Sbjct: 7579 ttgtacttcattgttgccttctcaaaaccaatggttggaaactgtttcgcatactcctca 7520 Query: 177 acatcgtggcgaagctttgcaat 199 ||||||||||||||||||||||| Sbjct: 7519 acatcgtggcgaagctttgcaat 7497 Score = 48.1 bits (24), Expect = 0.036 Identities = 57/68 (83%) Strand = Plus / Minus Query: 369 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 428 ||||||| |||||| || || |||||||| || ||||| || ||||| ||||| || ||| Sbjct: 7111 cccatccggatgccaccaggaaccatagcagacacatctcccggaacggtgtttttattt 7052 Query: 429 gctgcaat 436 |||||||| Sbjct: 7051 gctgcaat 7044
>dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H01, TM0541, complete sequence Length = 110985 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 117 ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcc 176 ||||||||||| || | ||||| || || || ||||| || ||||| ||||| ||||| Sbjct: 95182 ttgtacttcattgttgccttctcaaaaccaatggttggaaactgtttcgcatactcctca 95123 Query: 177 acatcgtggcgaagctttgcaat 199 ||||||||||||||||||||||| Sbjct: 95122 acatcgtggcgaagctttgcaat 95100 Score = 48.1 bits (24), Expect = 0.036 Identities = 57/68 (83%) Strand = Plus / Minus Query: 369 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 428 ||||||| |||||| || || |||||||| || ||||| || ||||| ||||| || ||| Sbjct: 94714 cccatccggatgccaccaggaaccatagcagacacatctcccggaacggtgtttttattt 94655 Query: 429 gctgcaat 436 |||||||| Sbjct: 94654 gctgcaat 94647
>gb|AC126010.13| Medicago truncatula clone mth2-20e4, complete sequence Length = 113964 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 369 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 428 ||||||||||| || || || |||||||| || ||||| || ||||||||||| || || Sbjct: 58327 cccatcctgataccaccaggaaccatagcagacacatctcctggaacagtgtttttatta 58268 Query: 429 gctgcaatatg 439 ||||||||||| Sbjct: 58267 gctgcaatatg 58257 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 481 cctttttcttgaggttcaccaaaactaaatggttatcagtcccaccagagacaatgtcgt 540 |||| ||||| || ||||||||||||| ||| || |||||||||||||| |||| || | Sbjct: 58000 ccttgttcttaagattcaccaaaactagatgattctcagtcccaccagaaacaagctcat 57941 Query: 541 agccttt 547 ||||||| Sbjct: 57940 agccttt 57934 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 325 cgaagtcctcctcaacaaatcctcttgatgtaag 358 |||| ||||||||||||||||| ||||| ||||| Sbjct: 58456 cgaaatcctcctcaacaaatccccttgaagtaag 58423
>gb|AF416481.1|AF416481 Cicer arietinum hydroxymethyl transferase mRNA, partial cds Length = 284 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 117 ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctc 175 |||||||||||||| |||| || || || || ||||| |||||||||||| ||||||| Sbjct: 68 ttgtacttcatggttgctttttcaaaaccaatggttggaaattgttttgcaaattcctc 10
>emb|CR962125.2| Medicago truncatula chromosome 5 clone mth2-179a9, COMPLETE SEQUENCE Length = 113972 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Minus Query: 369 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 428 ||||| ||||| ||||| || ||||| || || ||||| || ||||||||||| || || Sbjct: 22562 cccattctgatccctccaggaaccattgcagacacatctcctggaacagtgtttttattg 22503 Query: 429 gctgcaatatgcacattttctaaaaccttctccactcttgaaccatc 475 || || ||||| || |||||| |||||||| || ||||||||||| Sbjct: 22502 gcagctatatgaactgattctaacaccttctcaacccttgaaccatc 22456
>ref|XM_706590.1| Candida albicans SC5314 hypothetical protein (SHM1) partial mRNA Length = 1482 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 395 agctgaaacatcaccaggaacagtgttctt 424 |||||| |||||||||||||| |||||||| Sbjct: 1221 agctgatacatcaccaggaacggtgttctt 1192
>gb|AC129335.4| Mus musculus BAC clone RP23-109H7 from chromosome 1, complete sequence Length = 201274 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 ctttaaccttcaaagccaagtt 292 |||||||||||||||||||||| Sbjct: 32135 ctttaaccttcaaagccaagtt 32114
>ref|XM_883849.1| Candida albicans SC5314 hypothetical protein (CaJ7.0385) partial mRNA Length = 1482 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 395 agctgaaacatcaccaggaacagtgttctt 424 |||||| |||||||||||||| |||||||| Sbjct: 1221 agctgatacatcaccaggaacggtgttctt 1192
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 395 agctgaaacatcaccaggaacagtgttctt 424 |||||| |||||||||||||| |||||||| Sbjct: 736359 agctgatacatcaccaggaacggtgttctt 736388
>gb|U00025.1| Caenorhabditis elegans cosmid PAR2, complete sequence Length = 14320 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 aattgatatattgttcttaaggatt 53 |||||||||||||||||||| |||| Sbjct: 5131 aattgatatattgttcttaacgatt 5155
>emb|AL121870.9|HSB166C10 Human DNA sequence from clone RP13-166C10 on chromosome Xq21.1-21.3, complete sequence Length = 122049 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 tttcagcttggatgttgctgt 219 ||||||||||||||||||||| Sbjct: 104450 tttcagcttggatgttgctgt 104470
>gb|AC087878.7| Homo sapiens chromosome 15, clone RP11-62C7, complete sequence Length = 166485 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 498 accaaaactaaatggttatca 518 ||||||||||||||||||||| Sbjct: 122980 accaaaactaaatggttatca 122960
>gb|AC012077.4|AC012077 Homo sapiens BAC clone RP11-524G14 from Y, complete sequence Length = 209287 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 tttcagcttggatgttgctgt 219 ||||||||||||||||||||| Sbjct: 169390 tttcagcttggatgttgctgt 169410
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 472 catctattccctttttcttgaggtt 496 |||||||||||||||||| |||||| Sbjct: 1385562 catctattccctttttctggaggtt 1385538
>gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, complete sequence Length = 185681 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 gggttcccatcctgatgcct 383 |||||||||||||||||||| Sbjct: 170075 gggttcccatcctgatgcct 170094
>ref|XM_458248.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C14113g) partial mRNA Length = 1482 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 405 tcaccaggaacagtgttcttgtttgctgcaat 436 ||||| ||||||||||||||||| || ||||| Sbjct: 1208 tcacctggaacagtgttcttgttggcagcaat 1177
>gb|AY669085.1| Toxoplasma gondii strain RH serine hydroxymethyltransferase (shmt) mRNA, complete cds Length = 1547 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 atcaccaggaacagtgttcttgtt 427 ||||||||| |||||||||||||| Sbjct: 1219 atcaccagggacagtgttcttgtt 1196
>gb|AC165079.2| Mus musculus BAC clone RP24-92K17 from chromosome 16, complete sequence Length = 156977 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 aaaaccttctccactcttga 469 |||||||||||||||||||| Sbjct: 96604 aaaaccttctccactcttga 96623
>emb|Z78199.1|CEK12F2 Caenorhabditis elegans Cosmid K12F2, complete sequence Length = 12999 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 ggcgaagctttgcaatttcagctt 207 |||||||||| ||||||||||||| Sbjct: 7977 ggcgaagcttggcaatttcagctt 8000
>gb|AC116734.14| Mus musculus chromosome 7, clone RP23-359D11, complete sequence Length = 217741 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 gggttcccatcctgatgcct 383 |||||||||||||||||||| Sbjct: 34173 gggttcccatcctgatgcct 34192
>gb|AC104871.8| Mus musculus chromosome 13, clone RP23-281C23, complete sequence Length = 165863 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gaagctttgcaatttcagct 206 |||||||||||||||||||| Sbjct: 21826 gaagctttgcaatttcagct 21807
>gb|AC146632.23| Medicago truncatula clone mth2-57b3, complete sequence Length = 139216 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 ttggaggagagataatttgtttct 75 ||||||| |||||||||||||||| Sbjct: 124277 ttggaggtgagataatttgtttct 124300
>emb|AL157701.2| Human DNA sequence from clone RP4-628F15 on chromosome X Contains part of a novel gene, complete sequence Length = 93008 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ttttcttgaggttcaccaaa 503 |||||||||||||||||||| Sbjct: 55949 ttttcttgaggttcaccaaa 55968
>emb|X08067.1|CEMYO3 Caenorhabditis elegans myo-3 gene for myosin heavy chain 3 (MHC-A) Length = 11621 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 ggcgaagctttgcaatttcagctt 207 |||||||||| ||||||||||||| Sbjct: 7886 ggcgaagcttggcaatttcagctt 7863
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 405 tcaccaggaacagtgttcttgtttgctgcaat 436 ||||| ||||||||||||||||| || ||||| Sbjct: 1160303 tcacctggaacagtgttcttgttggcagcaat 1160272
>gb|AC117602.9| Mus musculus chromosome 5, clone RP23-462C22, complete sequence Length = 205604 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 557 actctcagcaaatctagcagagtt 580 |||||||||| ||||||||||||| Sbjct: 193726 actctcagcacatctagcagagtt 193749
>gb|AC087847.6| Homo sapiens chromosome 8, clone RP11-353D5, complete sequence Length = 170722 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ttcttgtacttcatggtctc 133 |||||||||||||||||||| Sbjct: 117303 ttcttgtacttcatggtctc 117322
>ref|NM_175472.3| Mus musculus zinc finger, CCHC domain containing 11 (Zcchc11), mRNA Length = 6054 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atatattgttcttaaggatt 53 |||||||||||||||||||| Sbjct: 5807 atatattgttcttaaggatt 5826
>ref|NM_073664.3| Caenorhabditis elegans MYOsin heavy chain structural genes family member (myo-3) (myo-3) mRNA, complete cds Length = 6059 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 ggcgaagctttgcaatttcagctt 207 |||||||||| ||||||||||||| Sbjct: 3565 ggcgaagcttggcaatttcagctt 3542
>gb|AC155267.1| Mus musculus BAC clone RP23-248M19 from chromosome 13, complete sequence Length = 178290 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gaagctttgcaatttcagct 206 |||||||||||||||||||| Sbjct: 83245 gaagctttgcaatttcagct 83226
>gb|AC160516.1| Medicago truncatula chromosome 7 BAC clone mth2-66d22, complete sequence Length = 116154 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ttggaggagagataatttgtttct 75 ||||||| |||||||||||||||| Sbjct: 115833 ttggaggtgagataatttgtttct 115810
>gb|AC016739.5| Homo sapiens BAC clone RP11-437N19 from 2, complete sequence Length = 90363 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ctgaattgatatattgttcttaag 49 ||||||| |||||||||||||||| Sbjct: 16306 ctgaatttatatattgttcttaag 16283
>gb|AC087798.10| Homo sapiens 12 BAC RP11-788H18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160095 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 aatatgcacattttctaaaa 453 |||||||||||||||||||| Sbjct: 37622 aatatgcacattttctaaaa 37641
>emb|BX005217.5| Zebrafish DNA sequence from clone CH211-87L3 in linkage group 15, complete sequence Length = 154452 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 497 caccaaaactaaatggttatcagt 520 |||||||| ||||||||||||||| Sbjct: 99468 caccaaaagtaaatggttatcagt 99445
>gb|BC084962.1| Xenopus laevis hypothetical LOC495440, mRNA (cDNA clone MGC:84058 IMAGE:6948237), complete cds Length = 6578 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 acctgctgctgcagctttaa 276 |||||||||||||||||||| Sbjct: 240 acctgctgctgcagctttaa 221
>gb|BC024681.1| Mus musculus zinc finger, CCHC domain containing 11, mRNA (cDNA clone IMAGE:3662238), with apparent retained intron Length = 2529 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atatattgttcttaaggatt 53 |||||||||||||||||||| Sbjct: 2230 atatattgttcttaaggatt 2249
>gb|BC038931.1| Mus musculus zinc finger, CCHC domain containing 11, mRNA (cDNA clone IMAGE:5376024) Length = 782 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atatattgttcttaaggatt 53 |||||||||||||||||||| Sbjct: 512 atatattgttcttaaggatt 531
>gb|AC131670.5| Mus musculus BAC clone RP23-307I19 from 5, complete sequence Length = 197080 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 557 actctcagcaaatctagcagagtt 580 |||||||||| ||||||||||||| Sbjct: 151214 actctcagcacatctagcagagtt 151191
>emb|AL626783.16| Mouse DNA sequence from clone RP23-406B13 on chromosome 4, complete sequence Length = 179370 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atatattgttcttaaggatt 53 |||||||||||||||||||| Sbjct: 77382 atatattgttcttaaggatt 77401
>dbj|AB002815.1| Perilla frutescens mRNA for chalcone synthase, complete cds Length = 1449 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cagtttggtacctgctgctg 267 |||||||||||||||||||| Sbjct: 1203 cagtttggtacctgctgctg 1222
>emb|AL772176.6| Mouse DNA sequence from clone RP23-37B18 on chromosome 4, complete sequence Length = 127986 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 ttctaaaaccttctccactcttga 469 |||||||||||| ||||||||||| Sbjct: 21941 ttctaaaaccttttccactcttga 21964 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,234,025 Number of Sequences: 3902068 Number of extensions: 6234025 Number of successful extensions: 148515 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 148208 Number of HSP's gapped (non-prelim): 287 length of query: 648 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 625 effective length of database: 17,143,297,704 effective search space: 10714561065000 effective search space used: 10714561065000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)