Clone Information

BLAST Search Result

Clone Name	rbags20f18
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	gb\|AC147802.2\| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genom...	82	2e-12
2	gb\|AC147803.2\| Oryza sativa chromosome 3 BAC OSJNBb0034P05 genom...	82	2e-12
3	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	82	2e-12
4	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	82	2e-12
5	dbj\|AK106105.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	82	2e-12
6	dbj\|AK060848.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	82	2e-12
7	dbj\|AK065159.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	74	6e-10
8	dbj\|AP004523.1\| Lotus japonicus genomic DNA, chromosome 1, clone...	72	2e-09
9	ref\|XM_479054.1\| Oryza sativa (japonica cultivar-group), mRNA	68	4e-08
10	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	68	4e-08
11	dbj\|AP004230.2\| Oryza sativa (japonica cultivar-group) genomic D...	68	4e-08
12	gb\|BT016933.1\| Zea mays clone E04912703G08.c mRNA sequence	66	1e-07
13	gb\|AC114983.6\| Oryza sativa (japonica cultivar-group) chromosome...	58	4e-05
14	gb\|AC135598.4\| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genom...	58	4e-05
15	gb\|AC158501.3\| Medicago truncatula chromosome 2 BAC clone mth2-7...	46	0.14
16	gb\|AY738712.1\| Digitalis thapsi progesterone 5-beta-reductase ge...	46	0.14
17	gb\|AY738710.1\| Digitalis mariana subsp. heywoodii progesterone 5...	46	0.14
18	gb\|AY585868.1\| Digitalis purpurea putative progesterone 5-beta-r...	46	0.14
19	emb\|AJ310673.1\|DPU310673 Digitalis purpurea mRNA for progesteron...	46	0.14
20	gb\|AC124461.3\| Mus musculus BAC clone RP24-144C5 from chromosome...	44	0.54
21	gb\|AC149222.4\| Mus musculus BAC clone RP23-325D10 from 7, comple...	44	0.54
22	gb\|AC093175.9\| Mus musculus Strain C57BL6/J Chromosome 7 BAC, RP...	44	0.54
23	gb\|AC109139.15\| Mus musculus chromosome 8, clone RP23-47L13, com...	42	2.1
24	gb\|AC182490.3\| Pan troglodytes BAC clone CH251-430P12 from chrom...	42	2.1
25	gb\|AC120782.25\| Pan troglodytes clone rp43-45g12, complete sequence	42	2.1
26	dbj\|AP007155.1\| Aspergillus oryzae RIB40 genomic DNA, SC003	42	2.1
27	gb\|AC023194.9\| Homo sapiens, clone RP11-216N21, complete sequence	42	2.1
28	gb\|AC073869.5\| Homo sapiens BAC clone RP11-109E12 from 2, comple...	42	2.1
29	gb\|AC148976.3\| Mus musculus BAC clone RP23-391I5 from 7, complet...	42	2.1
30	ref\|XM_473990.1\| Oryza sativa (japonica cultivar-group), predic...	40	8.4
31	gb\|AC125150.3\| Mus musculus BAC clone RP24-354K9 from chromosome...	40	8.4
32	ref\|XM_799014.1\| Trypanosoma cruzi strain CL Brener hypothetical...	40	8.4
33	ref\|XM_812688.1\| Trypanosoma cruzi strain CL Brener hypothetical...	40	8.4
34	gb\|U88165.1\| Caenorhabditis elegans cosmid F54C1, complete sequence	40	8.4
35	emb\|AL772197.12\| Human DNA sequence from clone RP11-24O6 on chro...	40	8.4
36	emb\|AL138787.11\| Human DNA sequence from clone RP4-665N4 on chro...	40	8.4
37	gb\|AC113558.8\| Homo sapiens chromosome 18, clone RP11-1130K19, c...	40	8.4
38	gb\|AC161518.3\| Mus musculus chromosome 19, clone RP24-232M2, com...	40	8.4
39	gb\|CP000142.2\| Pelobacter carbinolicus DSM 2380, complete genome	40	8.4
40	emb\|AL161492.2\|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, c...	40	8.4
41	gb\|AC068522.7\| Homo sapiens chromosome 8, clone RP11-23K11, comp...	40	8.4
42	gb\|AC104810.5\| Homo sapiens BAC clone RP11-641D2 from 4, complet...	40	8.4
43	gb\|AC021460.10\| Homo sapiens chromosome 15, clone RP11-259F15, c...	40	8.4
44	gb\|AC128966.4\| Rattus norvegicus BAC CH230-194D11 (Children's H...	40	8.4
45	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.4
46	gb\|AF307091.1\|AF307091 Acidithiobacillus ferrooxidans ribulose b...	40	8.4
47	gb\|AC009453.13\|AC009453 Homo sapiens chromosome 18, clone RP11-5...	40	8.4
48	gb\|AC018804.9\| Homo sapiens BAC clone RP11-397H17 from 2, comple...	40	8.4
49	gb\|AC104607.15\| Drosophila melanogaster X BAC RP98-19G9 (Roswell...	40	8.4
50	gb\|AC130390.4\| Drosophila melanogaster X BAC RP98-21O19 (Roswell...	40	8.4
51	gb\|AC097108.5\| Homo sapiens BAC clone RP11-745K4 from 4, complet...	40	8.4
52	gb\|AF096370.1\|F11O4 Arabidopsis thaliana BAC F11O4	40	8.4
53	dbj\|AK099320.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	8.4
54	dbj\|AK065665.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	8.4
55	emb\|AL732334.3\| Oryza sativa genomic DNA, chromosome 4, BAC clon...	40	8.4
56	gb\|AE003448.4\| Drosophila melanogaster chromosome X, section 32 ...	40	8.4
57	emb\|AL662988.4\|OSJN00186 Oryza sativa genomic DNA, chromosome 4,...	40	8.4
58	gb\|AC126323.6\| Homo sapiens chromosome 15, clone RP11-299H22, co...	40	8.4
59	emb\|AL844873.4\| Mouse DNA sequence from clone RP23-26H8 on chrom...	40	8.4

>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete
              sequence
          Length = 132981

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 143/177 (80%)
 Strand = Plus / Plus

                                                                          
Query: 231    gcatcaaggaacaaccttggaagccttcatcttatcgatccaagcgatgaaggagttgat 290
              |||||| || |||| |||| || |||||||||| || ||||| | | ||||||| || | 
Sbjct: 122316 gcatcatgggacaatcttgaaaaccttcatcttttctatccatgtgttgaaggaattcac 122375

                                                                          
Query: 291    ggtgttacggaagccgaggaacccatgctccttgctcttattcatgttgtccaaatgctc 350
               ||||| |||||||| ||||| ||||| ||||||||||| |||||| | |||||||||||
Sbjct: 122376 cgtgttccggaagccaaggaatccatgttccttgctcttgttcatgctatccaaatgctc 122435

                                                                       
Query: 351    gatgtcgatattgaacatggcatcaacgaacccccagctggtgatctcctcaagctc 407
              | ||  ||    ||||| ||||||||| |||| |||  |||||||||| ||||||||
Sbjct: 122436 gctgcggacgccgaacacggcatcaacaaaccaccaattggtgatctcttcaagctc 122492



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                          
Query: 530    ggtcggccagcatcggccagagctgcttccacttgaacacatccccattgctgcaattga 589
              |||| |||||||||||||||||  | ||||||||| | | |||||| ||||||||||| |
Sbjct: 122615 ggtctgccagcatcggccagagaagtttccacttgtagagatccccgttgctgcaattaa 122674

                                 
Query: 590    aagcctcgttcttggcgaa 608
              | ||||| |||||||||||
Sbjct: 122675 atgcctcattcttggcgaa 122693

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>gb|AC147803.2| Oryza sativa chromosome 3 BAC OSJNBb0034P05 genomic sequence,
            complete sequence
          Length = 35334

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 143/177 (80%)
 Strand = Plus / Plus

                                                                        
Query: 231  gcatcaaggaacaaccttggaagccttcatcttatcgatccaagcgatgaaggagttgat 290
            |||||| || |||| |||| || |||||||||| || ||||| | | ||||||| || | 
Sbjct: 1837 gcatcatgggacaatcttgaaaaccttcatcttttctatccatgtgttgaaggaattcac 1896

                                                                        
Query: 291  ggtgttacggaagccgaggaacccatgctccttgctcttattcatgttgtccaaatgctc 350
             ||||| |||||||| ||||| ||||| ||||||||||| |||||| | |||||||||||
Sbjct: 1897 cgtgttccggaagccaaggaatccatgttccttgctcttgttcatgctatccaaatgctc 1956

                                                                     
Query: 351  gatgtcgatattgaacatggcatcaacgaacccccagctggtgatctcctcaagctc 407
            | ||  ||    ||||| ||||||||| |||| |||  |||||||||| ||||||||
Sbjct: 1957 gctgcggacgccgaacacggcatcaacaaaccaccaattggtgatctcttcaagctc 2013



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                        
Query: 530  ggtcggccagcatcggccagagctgcttccacttgaacacatccccattgctgcaattga 589
            |||| |||||||||||||||||  | ||||||||| | | |||||| ||||||||||| |
Sbjct: 2136 ggtctgccagcatcggccagagaagtttccacttgtagagatccccgttgctgcaattaa 2195

                               
Query: 590  aagcctcgttcttggcgaa 608
            | ||||| |||||||||||
Sbjct: 2196 atgcctcattcttggcgaa 2214

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 143/177 (80%)
 Strand = Plus / Plus

                                                                            
Query: 231      gcatcaaggaacaaccttggaagccttcatcttatcgatccaagcgatgaaggagttgat 290
                |||||| || |||| |||| || |||||||||| || ||||| | | ||||||| || | 
Sbjct: 18217331 gcatcatgggacaatcttgaaaaccttcatcttttctatccatgtgttgaaggaattcac 18217390

                                                                            
Query: 291      ggtgttacggaagccgaggaacccatgctccttgctcttattcatgttgtccaaatgctc 350
                 ||||| |||||||| ||||| ||||| ||||||||||| |||||| | |||||||||||
Sbjct: 18217391 cgtgttccggaagccaaggaatccatgttccttgctcttgttcatgctatccaaatgctc 18217450

                                                                         
Query: 351      gatgtcgatattgaacatggcatcaacgaacccccagctggtgatctcctcaagctc 407
                | ||  ||    ||||| ||||||||| |||| |||  |||||||||| ||||||||
Sbjct: 18217451 gctgcggacgccgaacacggcatcaacaaaccaccaattggtgatctcttcaagctc 18217507



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                            
Query: 530      ggtcggccagcatcggccagagctgcttccacttgaacacatccccattgctgcaattga 589
                |||| |||||||||||||||||  | ||||||||| | | |||||| ||||||||||| |
Sbjct: 18217630 ggtctgccagcatcggccagagaagtttccacttgtagagatccccgttgctgcaattaa 18217689

                                   
Query: 590      aagcctcgttcttggcgaa 608
                | ||||| |||||||||||
Sbjct: 18217690 atgcctcattcttggcgaa 18217708



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 279      gaaggagttgatggtgttacggaagccgaggaacccatgctccttgctcttattcatgtt 338
                |||||| ||||  ||||| |||||||| ||||| || |||||||||||||| |||||| |
Sbjct: 17401391 gaaggacttgaccgtgttgcggaagcctaggaagccgtgctccttgctcttgttcatggt 17401332

                     
Query: 339      gtcca 343
                |||||
Sbjct: 17401331 gtcca 17401327



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 88/108 (81%)
 Strand = Plus / Minus

                                                                            
Query: 493      tcctctccctcataccccgcccactccaccccaaagcggtcggccagcatcggccagagc 552
                ||||| ||||| ||||||| |||||||| ||| || | | |||| |||| || ||| |||
Sbjct: 17401202 tcctccccctcgtaccccgaccactccatcccgaacctgccggcgagcaccgtccacagc 17401143

                                                                
Query: 553      tgcttccacttgaacacatccccattgctgcaattgaaagcctcgttc 600
                |||||||||||| | || || || |||||||| ||| | |||||||||
Sbjct: 17401142 tgcttccacttgtagacgtcgccgttgctgcagttgtacgcctcgttc 17401095

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 143/177 (80%)
 Strand = Plus / Plus

                                                                            
Query: 231      gcatcaaggaacaaccttggaagccttcatcttatcgatccaagcgatgaaggagttgat 290
                |||||| || |||| |||| || |||||||||| || ||||| | | ||||||| || | 
Sbjct: 18210872 gcatcatgggacaatcttgaaaaccttcatcttttctatccatgtgttgaaggaattcac 18210931

                                                                            
Query: 291      ggtgttacggaagccgaggaacccatgctccttgctcttattcatgttgtccaaatgctc 350
                 ||||| |||||||| ||||| ||||| ||||||||||| |||||| | |||||||||||
Sbjct: 18210932 cgtgttccggaagccaaggaatccatgttccttgctcttgttcatgctatccaaatgctc 18210991

                                                                         
Query: 351      gatgtcgatattgaacatggcatcaacgaacccccagctggtgatctcctcaagctc 407
                | ||  ||    ||||| ||||||||| |||| |||  |||||||||| ||||||||
Sbjct: 18210992 gctgcggacgccgaacacggcatcaacaaaccaccaattggtgatctcttcaagctc 18211048



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                            
Query: 530      ggtcggccagcatcggccagagctgcttccacttgaacacatccccattgctgcaattga 589
                |||| |||||||||||||||||  | ||||||||| | | |||||| ||||||||||| |
Sbjct: 18211171 ggtctgccagcatcggccagagaagtttccacttgtagagatccccgttgctgcaattaa 18211230

                                   
Query: 590      aagcctcgttcttggcgaa 608
                | ||||| |||||||||||
Sbjct: 18211231 atgcctcattcttggcgaa 18211249



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 279      gaaggagttgatggtgttacggaagccgaggaacccatgctccttgctcttattcatgtt 338
                |||||| ||||  ||||| |||||||| ||||| || |||||||||||||| |||||| |
Sbjct: 17394932 gaaggacttgaccgtgttgcggaagcctaggaagccgtgctccttgctcttgttcatggt 17394873

                     
Query: 339      gtcca 343
                |||||
Sbjct: 17394872 gtcca 17394868



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 88/108 (81%)
 Strand = Plus / Minus

                                                                            
Query: 493      tcctctccctcataccccgcccactccaccccaaagcggtcggccagcatcggccagagc 552
                ||||| ||||| ||||||| |||||||| ||| || | | |||| |||| || ||| |||
Sbjct: 17394743 tcctccccctcgtaccccgaccactccatcccgaacctgccggcgagcaccgtccacagc 17394684

                                                                
Query: 553      tgcttccacttgaacacatccccattgctgcaattgaaagcctcgttc 600
                |||||||||||| | || || || |||||||| ||| | |||||||||
Sbjct: 17394683 tgcttccacttgtagacgtcgccgttgctgcagttgtacgcctcgttc 17394636

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>dbj|AK106105.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-C11, full
            insert sequence
          Length = 1562

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 143/177 (80%)
 Strand = Plus / Minus

                                                                        
Query: 231  gcatcaaggaacaaccttggaagccttcatcttatcgatccaagcgatgaaggagttgat 290
            |||||| || |||| |||| || |||||||||| || ||||| | | ||||||| || | 
Sbjct: 1384 gcatcatgggacaatcttgaaaaccttcatcttttctatccatgtgttgaaggaattcac 1325

                                                                        
Query: 291  ggtgttacggaagccgaggaacccatgctccttgctcttattcatgttgtccaaatgctc 350
             ||||| |||||||| ||||| ||||| ||||||||||| |||||| | |||||||||||
Sbjct: 1324 cgtgttccggaagccaaggaatccatgttccttgctcttgttcatgctatccaaatgctc 1265

                                                                     
Query: 351  gatgtcgatattgaacatggcatcaacgaacccccagctggtgatctcctcaagctc 407
            | ||  ||    ||||| ||||||||| |||| |||  |||||||||| ||||||||
Sbjct: 1264 gctgcggacgccgaacacggcatcaacaaaccaccaattggtgatctcttcaagctc 1208



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                        
Query: 530  ggtcggccagcatcggccagagctgcttccacttgaacacatccccattgctgcaattga 589
            |||| |||||||||||||||||  | ||||||||| | | |||||| ||||||||||| |
Sbjct: 1085 ggtctgccagcatcggccagagaagtttccacttgtagagatccccgttgctgcaattaa 1026

                               
Query: 590  aagcctcgttcttggcgaa 608
            | ||||| |||||||||||
Sbjct: 1025 atgcctcattcttggcgaa 1007

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>dbj|AK060848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E05, full
            insert sequence
          Length = 1461

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 143/177 (80%)
 Strand = Plus / Minus

                                                                        
Query: 231  gcatcaaggaacaaccttggaagccttcatcttatcgatccaagcgatgaaggagttgat 290
            |||||| || |||| |||| || |||||||||| || ||||| | | ||||||| || | 
Sbjct: 1283 gcatcatgggacaatcttgaaaaccttcatcttttctatccatgtgttgaaggaattcac 1224

                                                                        
Query: 291  ggtgttacggaagccgaggaacccatgctccttgctcttattcatgttgtccaaatgctc 350
             ||||| |||||||| ||||| ||||| ||||||||||| |||||| | |||||||||||
Sbjct: 1223 cgtgttccggaagccaaggaatccatgttccttgctcttgttcatgctatccaaatgctc 1164

                                                                     
Query: 351  gatgtcgatattgaacatggcatcaacgaacccccagctggtgatctcctcaagctc 407
            | ||  ||    ||||| ||||||||| |||| |||  |||||||||| ||||||||
Sbjct: 1163 gctgcggacgccgaacacggcatcaacaaaccaccaattggtgatctcttcaagctc 1107



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                       
Query: 530 ggtcggccagcatcggccagagctgcttccacttgaacacatccccattgctgcaattga 589
           |||| |||||||||||||||||  | ||||||||| | | |||||| ||||||||||| |
Sbjct: 984 ggtctgccagcatcggccagagaagtttccacttgtagagatccccgttgctgcaattaa 925

                              
Query: 590 aagcctcgttcttggcgaa 608
           | ||||| |||||||||||
Sbjct: 924 atgcctcattcttggcgaa 906

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>dbj|AK065159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B24, full
            insert sequence
          Length = 1411

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 100/121 (82%)
 Strand = Plus / Minus

                                                                        
Query: 231  gcatcaaggaacaaccttggaagccttcatcttatcgatccaagcgatgaaggagttgat 290
            |||||| || |||| |||| || |||||||||| || ||||| | | ||||||| || | 
Sbjct: 1347 gcatcatgggacaatcttgaaaaccttcatcttttctatccatgtgttgaaggaattcac 1288

                                                                        
Query: 291  ggtgttacggaagccgaggaacccatgctccttgctcttattcatgttgtccaaatgctc 350
             ||||| |||||||| ||||| ||||| ||||||||||| |||||| | |||||||||||
Sbjct: 1287 cgtgttccggaagccaaggaatccatgttccttgctcttgttcatgctatccaaatgctc 1228

             
Query: 351  g 351
            |
Sbjct: 1227 g 1227



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                        
Query: 530  ggtcggccagcatcggccagagctgcttccacttgaacacatccccattgctgcaattga 589
            |||| |||||||||||||||||  | ||||||||| | | |||||| ||||||||||| |
Sbjct: 1048 ggtctgccagcatcggccagagaagtttccacttgtagagatccccgttgctgcaattaa 989

                               
Query: 590  aagcctcgttcttggcgaa 608
            | ||||| |||||||||||
Sbjct: 988  atgcctcattcttggcgaa 970

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>dbj|AP004523.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03J05, TM0050,
             complete sequence
          Length = 86209

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                             
Query: 553   tgcttccacttgaacacatccccattgctgcaattgaaagcctcgttc 600
             |||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 86148 tgcttccatttgaacacatctccattgctgcaattgaaggcctcgttc 86195

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>ref|XM_479054.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1233

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                       
Query: 493 tcctctccctcataccccgcccactccaccccaaagcggtcggccagcatcggccagagc 552
           ||||| ||||| |||||||||||||||||||| ||     |||| |||| |||||| |||
Sbjct: 974 tcctccccctcgtaccccgcccactccaccccgaacttcccggcgagcaccggccacagc 915

                                                             
Query: 553 tgcttccacttgaacacatccccattgctgcaattgaaagcctcgttctt 602
           |||||||||||| | |  || || |||||||| ||||| |||||||||||
Sbjct: 914 tgcttccacttgtagatgtcgccgttgctgcagttgaacgcctcgttctt 865



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 292  gtgttacggaagccgaggaacccatgctccttgctcttattcatgttgtc 341
            ||||| ||||| || ||||| || |||||||||||||| |||||| ||||
Sbjct: 1175 gtgttccggaaccccaggaatccgtgctccttgctcttgttcatggtgtc 1126



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 435  gatctctgtccacacggcctccttcccagccatggc 470
            |||||| | |||||| ||||||||||| ||||||||
Sbjct: 1032 gatctccgcccacaccgcctccttcccggccatggc 997

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                            
Query: 493      tcctctccctcataccccgcccactccaccccaaagcggtcggccagcatcggccagagc 552
                ||||| ||||| |||||||||||||||||||| ||     |||| |||| |||||| |||
Sbjct: 24502567 tcctccccctcgtaccccgcccactccaccccgaacttcccggcgagcaccggccacagc 24502508

                                                                  
Query: 553      tgcttccacttgaacacatccccattgctgcaattgaaagcctcgttctt 602
                |||||||||||| | |  || || |||||||| ||||| |||||||||||
Sbjct: 24502507 tgcttccacttgtagatgtcgccgttgctgcagttgaacgcctcgttctt 24502458



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                  
Query: 292      gtgttacggaagccgaggaacccatgctccttgctcttattcatgttgtc 341
                ||||| ||||| || ||||| || |||||||||||||| |||||| ||||
Sbjct: 24502768 gtgttccggaaccccaggaatccgtgctccttgctcttgttcatggtgtc 24502719



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 435      gatctctgtccacacggcctccttcccagccatggc 470
                |||||| | |||||| ||||||||||| ||||||||
Sbjct: 24502625 gatctccgcccacaccgcctccttcccggccatggc 24502590

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>dbj|AP004230.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ2013_G04
          Length = 73667

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                         
Query: 493   tcctctccctcataccccgcccactccaccccaaagcggtcggccagcatcggccagagc 552
             ||||| ||||| |||||||||||||||||||| ||     |||| |||| |||||| |||
Sbjct: 52377 tcctccccctcgtaccccgcccactccaccccgaacttcccggcgagcaccggccacagc 52318

                                                               
Query: 553   tgcttccacttgaacacatccccattgctgcaattgaaagcctcgttctt 602
             |||||||||||| | |  || || |||||||| ||||| |||||||||||
Sbjct: 52317 tgcttccacttgtagatgtcgccgttgctgcagttgaacgcctcgttctt 52268



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 292   gtgttacggaagccgaggaacccatgctccttgctcttattcatgttgtc 341
             ||||| ||||| || ||||| || |||||||||||||| |||||| ||||
Sbjct: 52578 gtgttccggaaccccaggaatccgtgctccttgctcttgttcatggtgtc 52529



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 435   gatctctgtccacacggcctccttcccagccatggc 470
             |||||| | |||||| ||||||||||| ||||||||
Sbjct: 52435 gatctccgcccacaccgcctccttcccggccatggc 52400

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>gb|BT016933.1| Zea mays clone E04912703G08.c mRNA sequence
          Length = 430

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 254 ccttcatcttatcgatccaagcgatgaaggagttgatggtgttacggaagccgaggaacc 313
           |||||| ||| |||||||| | | |||| ||| |||  ||||| | |||||||||||| |
Sbjct: 220 ccttcagcttctcgatccatgtgttgaaagagctgacagtgttcctgaagccgaggaagc 279

                                                                       
Query: 314 catgctccttgctcttattcatgttgtccaaatgctcgatgtcgatattgaacatggcat 373
           ||||||||||||| || |||||| |||||| | ||| | | || | |   ||||||||||
Sbjct: 280 catgctccttgcttttgttcatgctgtccagaagctgggtctccacagcaaacatggcat 339

                                                
Query: 374 caacgaacccccagctggtgatctcctcaagctccgt 410
           | ||||||| |||  | |||||||| |||||||||||
Sbjct: 340 cgacgaaccaccaattcgtgatctcgtcaagctccgt 376

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>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19
              map E30331S, complete sequence
          Length = 164820

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                          
Query: 279    gaaggagttgatggtgttacggaagccgaggaacccatgctccttgctcttattcatgtt 338
              |||||| ||||  ||||| |||||||| ||||| || |||||||||||||| |||||| |
Sbjct: 162318 gaaggacttgaccgtgttgcggaagcctaggaagccgtgctccttgctcttgttcatggt 162377

                   
Query: 339    gtcca 343
              |||||
Sbjct: 162378 gtcca 162382



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 88/108 (81%)
 Strand = Plus / Plus

                                                                          
Query: 493    tcctctccctcataccccgcccactccaccccaaagcggtcggccagcatcggccagagc 552
              ||||| ||||| ||||||| |||||||| ||| || | | |||| |||| || ||| |||
Sbjct: 162507 tcctccccctcgtaccccgaccactccatcccgaacctgccggcgagcaccgtccacagc 162566

                                                              
Query: 553    tgcttccacttgaacacatccccattgctgcaattgaaagcctcgttc 600
              |||||||||||| | || || || |||||||| ||| | |||||||||
Sbjct: 162567 tgcttccacttgtagacgtcgccgttgctgcagttgtacgcctcgttc 162614

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>gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genomic sequence, complete
              sequence
          Length = 137220

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                          
Query: 279    gaaggagttgatggtgttacggaagccgaggaacccatgctccttgctcttattcatgtt 338
              |||||| ||||  ||||| |||||||| ||||| || |||||||||||||| |||||| |
Sbjct: 123768 gaaggacttgaccgtgttgcggaagcctaggaagccgtgctccttgctcttgttcatggt 123709

                   
Query: 339    gtcca 343
              |||||
Sbjct: 123708 gtcca 123704



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 88/108 (81%)
 Strand = Plus / Minus

                                                                          
Query: 493    tcctctccctcataccccgcccactccaccccaaagcggtcggccagcatcggccagagc 552
              ||||| ||||| ||||||| |||||||| ||| || | | |||| |||| || ||| |||
Sbjct: 123579 tcctccccctcgtaccccgaccactccatcccgaacctgccggcgagcaccgtccacagc 123520

                                                              
Query: 553    tgcttccacttgaacacatccccattgctgcaattgaaagcctcgttc 600
              |||||||||||| | || || || |||||||| ||| | |||||||||
Sbjct: 123519 tgcttccacttgtagacgtcgccgttgctgcagttgtacgcctcgttc 123472

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>gb|AC158501.3| Medicago truncatula chromosome 2 BAC clone mth2-70b22, complete
             sequence
          Length = 108930

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 556   ttccacttgaacacatccccattgctgcaattgaa 590
             ||||||||||| ||||| ||||| |||||||||||
Sbjct: 29412 ttccacttgaaaacatcaccattactgcaattgaa 29446

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>gb|AY738712.1| Digitalis thapsi progesterone 5-beta-reductase gene, complete cds
          Length = 1247

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 313  ccatgctccttgctcttattcat 335
            |||||||||||||||||||||||
Sbjct: 1168 ccatgctccttgctcttattcat 1146

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>gb|AY738710.1| Digitalis mariana subsp. heywoodii progesterone 5-beta-reductase
            gene, complete cds
          Length = 1247

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 313  ccatgctccttgctcttattcat 335
            |||||||||||||||||||||||
Sbjct: 1168 ccatgctccttgctcttattcat 1146

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>gb|AY585868.1| Digitalis purpurea putative progesterone 5-beta-reductase gene,
            complete cds
          Length = 1247

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 313  ccatgctccttgctcttattcat 335
            |||||||||||||||||||||||
Sbjct: 1168 ccatgctccttgctcttattcat 1146

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>emb|AJ310673.1|DPU310673 Digitalis purpurea mRNA for progesterone 5-beta-reductase (p5Br gene)
          Length = 1357

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 313  ccatgctccttgctcttattcat 335
            |||||||||||||||||||||||
Sbjct: 1102 ccatgctccttgctcttattcat 1080

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>gb|AC124461.3| Mus musculus BAC clone RP24-144C5 from chromosome 7, complete sequence
          Length = 185788

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 438    ctctgtccacacggcctccttcccag 463
              |||| |||||||||||||||||||||
Sbjct: 113067 ctctctccacacggcctccttcccag 113092

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>gb|AC149222.4| Mus musculus BAC clone RP23-325D10 from 7, complete sequence
          Length = 220651

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 438   ctctgtccacacggcctccttcccag 463
             |||| |||||||||||||||||||||
Sbjct: 10140 ctctctccacacggcctccttcccag 10115

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>gb|AC093175.9| Mus musculus Strain C57BL6/J Chromosome 7 BAC, RP23-200D13, complete
              sequence
          Length = 219763

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 438    ctctgtccacacggcctccttcccag 463
              |||| |||||||||||||||||||||
Sbjct: 172323 ctctctccacacggcctccttcccag 172298

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>gb|AC109139.15| Mus musculus chromosome 8, clone RP23-47L13, complete sequence
          Length = 268904

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 437    tctctgtccacacggcctcct 457
              |||||||||||||||||||||
Sbjct: 121779 tctctgtccacacggcctcct 121759

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>gb|AC182490.3| Pan troglodytes BAC clone CH251-430P12 from chromosome 2, complete
              sequence
          Length = 158411

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 111    tacaacaattggcacaaataacagcatgtaact 143
              |||||||| | |||||||| |||||||||||||
Sbjct: 100377 tacaacaaattgcacaaatcacagcatgtaact 100409

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>gb|AC120782.25| Pan troglodytes clone rp43-45g12, complete sequence
          Length = 167170

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 111   tacaacaattggcacaaataacagcatgtaact 143
             |||||||| | |||||||| |||||||||||||
Sbjct: 44088 tacaacaaattgcacaaatcacagcatgtaact 44056

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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 453     ctccttcccagccatggcgtc 473
               |||||||||||||||||||||
Sbjct: 2757152 ctccttcccagccatggcgtc 2757132

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>gb|AC023194.9| Homo sapiens, clone RP11-216N21, complete sequence
          Length = 175834

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 155   caaattgataaatgagagataaaat 179
             |||||||||||||||||| ||||||
Sbjct: 89089 caaattgataaatgagagctaaaat 89065

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>gb|AC073869.5| Homo sapiens BAC clone RP11-109E12 from 2, complete sequence
          Length = 195280

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 111    tacaacaattggcacaaataacagcatgtaact 143
              |||||||| | |||||||| |||||||||||||
Sbjct: 138998 tacaacaaattgcacaaatcacagcatgtaact 138966

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>gb|AC148976.3| Mus musculus BAC clone RP23-391I5 from 7, complete sequence
          Length = 199824

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 471    gtcggagagcgaaaaccggttgtcc 495
              ||||||||||||||||| |||||||
Sbjct: 101021 gtcggagagcgaaaacctgttgtcc 101045

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>ref|XM_473990.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1392

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  attcatgttgtccaaatgct 349
            ||||||||||||||||||||
Sbjct: 1181 attcatgttgtccaaatgct 1200

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>gb|AC125150.3| Mus musculus BAC clone RP24-354K9 from chromosome 19, complete sequence
          Length = 154390

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 584   aattgaaagcctcgttcttg 603
             ||||||||||||||||||||
Sbjct: 76623 aattgaaagcctcgttcttg 76604

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>ref|XM_799014.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511623.10) partial mRNA
          Length = 2508

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 564  gaacacatccccattgctgc 583
            ||||||||||||||||||||
Sbjct: 2433 gaacacatccccattgctgc 2414

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>ref|XM_812688.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053504741.100) partial mRNA
          Length = 2508

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 564  gaacacatccccattgctgc 583
            ||||||||||||||||||||
Sbjct: 2433 gaacacatccccattgctgc 2414

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>gb|U88165.1| Caenorhabditis elegans cosmid F54C1, complete sequence
          Length = 31433

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   aaattgataaatgagagataaaat 179
             ||||||| ||||||||||||||||
Sbjct: 28407 aaattgaaaaatgagagataaaat 28430

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>emb|AL772197.12| Human DNA sequence from clone RP11-24O6 on chromosome X Contains the 5'
             end of the SH3KBP1 gene for SH3-domain kinase binding
             protein 1 (CIN85), two novel genes and one CpG island,
             complete sequence
          Length = 106342

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   aatgggatctggtggcatac 196
             ||||||||||||||||||||
Sbjct: 92537 aatgggatctggtggcatac 92518

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>emb|AL138787.11| Human DNA sequence from clone RP4-665N4 on chromosome 1p34.1-35.3
             Contains the 3' end of the EIF2C3 gene for eukaryotic
             translation initiation factor 2C, 3, a putative novel
             transcript, a implantation-associated protein
             (DKFZp564K142) processed pseudogene, the TEKT2 gene for
             tektin 2 (testicular), the COL8A2 gene for collagen, type
             VIII, alpha 2, complete sequence
          Length = 128133

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 207   acaatagagtactagacaataaga 230
             |||||| |||||||||||||||||
Sbjct: 43571 acaatacagtactagacaataaga 43548

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>gb|AC113558.8| Homo sapiens chromosome 18, clone RP11-1130K19, complete sequence
          Length = 165957

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   ataaatgagagataaaatgg 181
             ||||||||||||||||||||
Sbjct: 68546 ataaatgagagataaaatgg 68527

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>gb|AC161518.3| Mus musculus chromosome 19, clone RP24-232M2, complete sequence
          Length = 176356

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 584    aattgaaagcctcgttcttg 603
              ||||||||||||||||||||
Sbjct: 135957 aattgaaagcctcgttcttg 135976

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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 563     tgaacacatccccattgctg 582
               ||||||||||||||||||||
Sbjct: 3427338 tgaacacatccccattgctg 3427357

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>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4
          Length = 198697

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   caaatgctcgatgtcgatat 361
             ||||||||||||||||||||
Sbjct: 99585 caaatgctcgatgtcgatat 99604

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>gb|AC068522.7| Homo sapiens chromosome 8, clone RP11-23K11, complete sequence
          Length = 146952

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   ttattcatgttgtccaaatg 347
             ||||||||||||||||||||
Sbjct: 96854 ttattcatgttgtccaaatg 96873

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>gb|AC104810.5| Homo sapiens BAC clone RP11-641D2 from 4, complete sequence
          Length = 165432

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    atgtaactaatttcagaagc 155
              ||||||||||||||||||||
Sbjct: 135692 atgtaactaatttcagaagc 135711

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>gb|AC021460.10| Homo sapiens chromosome 15, clone RP11-259F15, complete sequence
          Length = 146698

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 343    aaatgctcgatgtcgatattgaacatgg 370
              ||||||| ||||| ||||||||||||||
Sbjct: 139479 aaatgcttgatgttgatattgaacatgg 139452

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>gb|AC128966.4| Rattus norvegicus  BAC CH230-194D11 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 214096

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    tttatttggttctggcttat 103
             ||||||||||||||||||||
Sbjct: 87023 tttatttggttctggcttat 87042

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 330      attcatgttgtccaaatgct 349
                ||||||||||||||||||||
Sbjct: 32037339 attcatgttgtccaaatgct 32037320

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>gb|AF307091.1|AF307091 Acidithiobacillus ferrooxidans ribulose bisphosphate
            carboxylase/oxygenase, large subunit (cbbL2), ribulose
            bisphosphate carboxylase/oxygenase, small subunit
            (cbbS2), and CbbQ (cbbQ) genes, complete cds
          Length = 2783

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   atgcaatgaagacatgacgg 53
            ||||||||||||||||||||
Sbjct: 2174 atgcaatgaagacatgacgg 2193

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>gb|AC009453.13|AC009453 Homo sapiens chromosome 18, clone RP11-59F14, complete sequence
          Length = 168947

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    ataaatgagagataaaatgg 181
              ||||||||||||||||||||
Sbjct: 162091 ataaatgagagataaaatgg 162110

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>gb|AC018804.9| Homo sapiens BAC clone RP11-397H17 from 2, complete sequence
          Length = 195514

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 111   tacaacaattggcacaaataacagcatgtaac 142
             |||||||| | |||||||| ||||||||||||
Sbjct: 28664 tacaacaaattgcacaaatcacagcatgtaac 28633

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>gb|AC104607.15| Drosophila melanogaster X BAC RP98-19G9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 137639

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 144   aatttcagaagcaaattgataaat 167
             ||||||| ||||||||||||||||
Sbjct: 58880 aatttcaaaagcaaattgataaat 58857

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>gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 184175

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 144    aatttcagaagcaaattgataaat 167
              ||||||| ||||||||||||||||
Sbjct: 172634 aatttcaaaagcaaattgataaat 172611

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>gb|AC097108.5| Homo sapiens BAC clone RP11-745K4 from 4, complete sequence
          Length = 207516

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   atgtaactaatttcagaagc 155
             ||||||||||||||||||||
Sbjct: 22775 atgtaactaatttcagaagc 22794

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>gb|AF096370.1|F11O4 Arabidopsis thaliana BAC F11O4
          Length = 72872

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 342  caaatgctcgatgtcgatat 361
            ||||||||||||||||||||
Sbjct: 3992 caaatgctcgatgtcgatat 3973

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>dbj|AK099320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033008O14, full
            insert sequence
          Length = 1787

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  attcatgttgtccaaatgct 349
            ||||||||||||||||||||
Sbjct: 1309 attcatgttgtccaaatgct 1328

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>dbj|AK065665.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041I04, full
            insert sequence
          Length = 1859

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  attcatgttgtccaaatgct 349
            ||||||||||||||||||||
Sbjct: 1359 attcatgttgtccaaatgct 1378

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>emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0323C08, complete
             sequence
          Length = 94903

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   attcatgttgtccaaatgct 349
             ||||||||||||||||||||
Sbjct: 20660 attcatgttgtccaaatgct 20641

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>gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 of 74 of the complete
              sequence
          Length = 318665

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 144    aatttcagaagcaaattgataaat 167
              ||||||| ||||||||||||||||
Sbjct: 199523 aatttcaaaagcaaattgataaat 199500

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>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06,
             complete sequence
          Length = 141752

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   attcatgttgtccaaatgct 349
             ||||||||||||||||||||
Sbjct: 58046 attcatgttgtccaaatgct 58027

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>gb|AC126323.6| Homo sapiens chromosome 15, clone RP11-299H22, complete sequence
          Length = 170132

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 343   aaatgctcgatgtcgatattgaacatgg 370
             ||||||| ||||| ||||||||||||||
Sbjct: 80575 aaatgcttgatgttgatattgaacatgg 80602

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>emb|AL844873.4| Mouse DNA sequence from clone RP23-26H8 on chromosome 2, complete
              sequence
          Length = 250495

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    atcaaggaacaaccttggaa 252
              ||||||||||||||||||||
Sbjct: 128950 atcaaggaacaaccttggaa 128931


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,143,194
Number of Sequences: 3902068
Number of extensions: 5143194
Number of successful extensions: 95955
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95625
Number of HSP's gapped (non-prelim): 327
length of query: 618
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 595
effective length of database: 17,143,297,704
effective search space: 10200262133880
effective search space used: 10200262133880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result