Clone Information

BLAST Search Result

Clone Name	rbags20f16
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS19_ORYSA (P40978) 40S ribosomal protein S19	259	3e-69
2	RS193_ARATH (Q9FNP8) 40S ribosomal protein S19-3	214	1e-55
3	RS192_ARATH (Q9LF30) 40S ribosomal protein S19-2	213	5e-55
4	RS191_ARATH (Q9SGA6) 40S ribosomal protein S19-1	210	2e-54
5	RS19_MYAAR (Q94613) 40S ribosomal protein S19	176	7e-44
6	RS19_MYXGL (Q9Y0H3) 40S ribosomal protein S19	164	3e-40
7	RS19_BRABE (Q8T5Z4) 40S ribosomal protein S19	163	4e-40
8	RS19_RAT (P17074) 40S ribosomal protein S19	162	6e-40
9	RS19_MOUSE (Q9CZX8) 40S ribosomal protein S19	162	6e-40
10	RS19_GILMI (Q9DFR5) 40S ribosomal protein S19	162	1e-39
11	RS19_PONPY (Q5R8M9) 40S ribosomal protein S19	160	3e-39
12	RS19_HUMAN (P39019) 40S ribosomal protein S19	160	3e-39
13	RS19_ICTPU (Q90YQ4) 40S ribosomal protein S19	160	3e-39
14	RS19_PIG (Q29308) 40S ribosomal protein S19 (Fragment)	157	3e-38
15	RS19_AEQIR (Q8ITC3) 40S ribosomal protein S19	156	4e-38
16	RS19_PAGMA (P61155) 40S ribosomal protein S19	156	5e-38
17	RS19_EMENI (P27073) 40S ribosomal protein S19 (S16)	154	3e-37
18	RS19B_SCHPO (P79016) 40S ribosomal protein S19-B (S16-B)	152	6e-37
19	RS19A_SCHPO (P58234) 40S ribosomal protein S19-A (S16-A)	152	1e-36
20	RS19A_DROME (P39018) 40S ribosomal protein S19a	140	2e-33
21	RS19B_YEAST (P07281) 40S ribosomal protein S19-B (S16B) (YS16) (...	140	2e-33
22	RS19A_YEAST (P07280) 40S ribosomal protein S19-A (S16A) (YS16) (...	140	2e-33
23	RS19S_ASCSU (P39698) 40S ribosomal protein S19S	140	4e-33
24	RS19_ENTHI (O15631) 40S ribosomal protein S19	135	1e-31
25	RS19_CAEEL (O18650) 40S ribosomal protein S19	130	3e-30
26	RS19B_DROME (Q7KS38) 40S ribosomal protein S19b	130	4e-30
27	RS19G_ASCSU (P24494) 40S ribosomal protein S19G (Eliminated prot...	130	4e-30
28	RS19E_METJA (P54057) 30S ribosomal protein S19e	108	2e-23
29	RS19E_METTH (O27653) 30S ribosomal protein S19e	106	5e-23
30	RS19E_AERPE (Q9YD22) 30S ribosomal protein S19e	104	2e-22
31	RS19E_ARCFU (O28210) 30S ribosomal protein S19e	102	7e-22
32	RS19E_PYRHO (O59041) 30S ribosomal protein S19e	101	2e-21
33	RS19E_THEVO (Q97CU4) 30S ribosomal protein S19e	86	9e-17
34	RS19E_HALMA (P19952) 30S ribosomal protein S19e (HS12) (E1.3)	85	2e-16
35	RS19E_THEAC (Q9HM21) 30S ribosomal protein S19e	82	2e-15
36	LCE1A_HUMAN (Q5T7P2) Late cornified envelope protein 1A (Late en...	32	2.0
37	ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein ...	31	2.6
38	STP2_CANFA (O77645) Nuclear transition protein 2 (TP-2) (TP2)	31	3.4
39	TRPF_SACKU (Q5XQP9) N-(5'-phosphoribosyl)anthranilate isomerase ...	31	3.4
40	LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late en...	30	4.4
41	LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late en...	30	4.4
42	HMD_METVO (Q50840) 5,10-methenyltetrahydromethanopterin hydrogen...	30	5.8
43	LCE1F_HUMAN (Q5T754) Late cornified envelope protein 1F (Late en...	30	5.8
44	RPOC_SYMTH (Q67JT4) DNA-directed RNA polymerase beta' chain (EC ...	30	7.6
45	GAL1_PYRKO (Q5JEK8) Galactokinase (EC 2.7.1.6) (Galactose kinase)	29	9.9
46	PPGK_MYCLE (Q49988) Polyphosphate glucokinase (EC 2.7.1.63) (Pol...	29	9.9
47	CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displace...	29	9.9
48	GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outg...	29	9.9
49	DDL_MYCSM (Q9ZGN0) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-a...	29	9.9
50	YDHC_BACSU (O05494) Hypothetical transcriptional regulator ydhC	29	9.9
51	LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late en...	29	9.9

>RS19_ORYSA (P40978) 40S ribosomal protein S19|
          Length = 146

 Score =  259 bits (663), Expect = 3e-69
 Identities = 124/132 (93%), Positives = 128/132 (96%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPP D DWYY RAAS+ARKIYL
Sbjct: 10  KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYL 69

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           RQGIG+GGFQKIYGGRQRNGSRPPHFCKSSGA+SRNILQ+LQKMGIIDVDPKGGRLITSQ
Sbjct: 70  RQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQ 129

Query: 170 GRRDLDQVAGTV 135
           GRRDLDQVAG V
Sbjct: 130 GRRDLDQVAGRV 141

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>RS193_ARATH (Q9FNP8) 40S ribosomal protein S19-3|
          Length = 143

 Score =  214 bits (546), Expect = 1e-55
 Identities = 99/134 (73%), Positives = 116/134 (86%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDV+PHEFVKAY+AHLKRSGK+ELP W DIVKT + KEL P D DWYYIRAASMARK+YL
Sbjct: 8   KDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYL 67

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R G+G+G F++IYGG +RNGSRPPHFCKSSG V+R+ILQ+LQ M I+D+D KGGR ITS 
Sbjct: 68  RGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSS 127

Query: 170 GRRDLDQVAGTVPA 129
           G+RDLDQVAG + A
Sbjct: 128 GQRDLDQVAGRIAA 141

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>RS192_ARATH (Q9LF30) 40S ribosomal protein S19-2|
          Length = 143

 Score =  213 bits (541), Expect = 5e-55
 Identities = 97/135 (71%), Positives = 117/135 (86%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDV+PH+FVKAY++HLKRSGK+ELP W DIVKT R KEL P D DWYYIRAASMARKIYL
Sbjct: 8   KDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYL 67

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R G+G+G F++IYGG +RNGSRPPHFCKSSG ++R+ILQ+L+ M I+++D KGGR ITS 
Sbjct: 68  RGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITSS 127

Query: 170 GRRDLDQVAGTVPAE 126
           G+RDLDQVAG + AE
Sbjct: 128 GQRDLDQVAGRIAAE 142

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>RS191_ARATH (Q9SGA6) 40S ribosomal protein S19-1|
          Length = 143

 Score =  210 bits (535), Expect = 2e-54
 Identities = 94/135 (69%), Positives = 116/135 (85%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDV+PH+FVKAY++HLKRSGK+ELP W DIVKT + KEL P D DWYYIRAASMARK+YL
Sbjct: 8   KDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYL 67

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R G+G+G F++IYGG +RNGSRPPHFCKSSG ++R+ILQ+L+ M I+++D KGGR ITS 
Sbjct: 68  RGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSS 127

Query: 170 GRRDLDQVAGTVPAE 126
           G+RDLDQVAG +  E
Sbjct: 128 GQRDLDQVAGRIAVE 142

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>RS19_MYAAR (Q94613) 40S ribosomal protein S19|
          Length = 149

 Score =  176 bits (445), Expect = 7e-44
 Identities = 76/132 (57%), Positives = 104/132 (78%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDV+ HEF +A++A LK+SGKM++PEW D VKT  FKEL P + DWY+IRAAS+ R +Y+
Sbjct: 6   KDVSSHEFTRAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLYI 65

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R   GIG F+KIYGGR+R G+ P HFCK++G++SR +LQ L+ + I++ DP GGR +TSQ
Sbjct: 66  RSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLTSQ 125

Query: 170 GRRDLDQVAGTV 135
           GRRDLD++A  +
Sbjct: 126 GRRDLDRIAAQI 137

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>RS19_MYXGL (Q9Y0H3) 40S ribosomal protein S19|
          Length = 145

 Score =  164 bits (414), Expect = 3e-40
 Identities = 73/132 (55%), Positives = 99/132 (75%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDVN  EFVKA +A  K+SGK++ P+WVD VK  + KEL P D DWYYIR AS+AR +Y+
Sbjct: 7   KDVNQQEFVKALAAFFKKSGKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHLYM 66

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R G+G+G   KIYGGRQRNG+RP H+ + S  V+R +LQ L+ + +++ DP GGR +TS 
Sbjct: 67  RGGVGVGAMTKIYGGRQRNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKDPNGGRRLTSI 126

Query: 170 GRRDLDQVAGTV 135
           G+RD+D++AG V
Sbjct: 127 GQRDMDRIAGQV 138

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>RS19_BRABE (Q8T5Z4) 40S ribosomal protein S19|
          Length = 147

 Score =  163 bits (412), Expect = 4e-40
 Identities = 76/132 (57%), Positives = 101/132 (76%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDVN  EFVKA++A LK+SGK++LPEWVD+VKTA  KEL P D DW+Y+RAAS AR +Y+
Sbjct: 8   KDVNQQEFVKAFAAFLKKSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLYM 67

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R G+G+G   KIYGGR+R G++P  F   S  VSR +LQ L+ + +++ D  GGR +TSQ
Sbjct: 68  RGGVGVGAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAGGRRLTSQ 127

Query: 170 GRRDLDQVAGTV 135
           G+RDLD++AG V
Sbjct: 128 GQRDLDRIAGQV 139

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>RS19_RAT (P17074) 40S ribosomal protein S19|
          Length = 144

 Score =  162 bits (411), Expect = 6e-40
 Identities = 76/134 (56%), Positives = 100/134 (74%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDVN  EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +YL
Sbjct: 6   KDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYL 65

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R G G+G   KIYGGRQRNG RP HF + S +V+R +LQ L+ + +++ D  GGR +T Q
Sbjct: 66  RGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQ 125

Query: 170 GRRDLDQVAGTVPA 129
           G+RDLD++AG V A
Sbjct: 126 GQRDLDRIAGQVAA 139

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>RS19_MOUSE (Q9CZX8) 40S ribosomal protein S19|
          Length = 144

 Score =  162 bits (411), Expect = 6e-40
 Identities = 76/134 (56%), Positives = 100/134 (74%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDVN  EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +YL
Sbjct: 6   KDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYL 65

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R G G+G   KIYGGRQRNG RP HF + S +V+R +LQ L+ + +++ D  GGR +T Q
Sbjct: 66  RGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQ 125

Query: 170 GRRDLDQVAGTVPA 129
           G+RDLD++AG V A
Sbjct: 126 GQRDLDRIAGQVAA 139

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>RS19_GILMI (Q9DFR5) 40S ribosomal protein S19|
          Length = 147

 Score =  162 bits (409), Expect = 1e-39
 Identities = 75/134 (55%), Positives = 100/134 (74%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDVN  EFV+A +A LK+SGK+++P+WVD+VK  R KEL P+D +W+YIRAAS  R +YL
Sbjct: 7   KDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHLYL 66

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R G G+G   KIYGGRQRNG  P H+ + S  V+R +LQ L+ + +I+ DP GGR +T+Q
Sbjct: 67  RGGAGVGSMTKIYGGRQRNGVCPAHYSEGSKNVARKVLQALELLKMIEKDPNGGRRLTAQ 126

Query: 170 GRRDLDQVAGTVPA 129
           G RDLD++AG V A
Sbjct: 127 GTRDLDRIAGQVSA 140

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>RS19_PONPY (Q5R8M9) 40S ribosomal protein S19|
          Length = 144

 Score =  160 bits (405), Expect = 3e-39
 Identities = 75/134 (55%), Positives = 99/134 (73%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDVN  EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +YL
Sbjct: 6   KDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYL 65

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R G G+G   KIYGGRQRNG  P HF + S +V+R +LQ L+ + +++ D  GGR +T Q
Sbjct: 66  RGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQ 125

Query: 170 GRRDLDQVAGTVPA 129
           G+RDLD++AG V A
Sbjct: 126 GQRDLDRIAGQVAA 139

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>RS19_HUMAN (P39019) 40S ribosomal protein S19|
          Length = 144

 Score =  160 bits (405), Expect = 3e-39
 Identities = 75/134 (55%), Positives = 99/134 (73%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDVN  EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +YL
Sbjct: 6   KDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYL 65

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R G G+G   KIYGGRQRNG  P HF + S +V+R +LQ L+ + +++ D  GGR +T Q
Sbjct: 66  RGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQ 125

Query: 170 GRRDLDQVAGTVPA 129
           G+RDLD++AG V A
Sbjct: 126 GQRDLDRIAGQVAA 139

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>RS19_ICTPU (Q90YQ4) 40S ribosomal protein S19|
          Length = 147

 Score =  160 bits (405), Expect = 3e-39
 Identities = 75/134 (55%), Positives = 99/134 (73%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDVN  EFV+A +A LK+SGK+++P+WVDIVK A+ KEL P D +W+YIRAAS  R +YL
Sbjct: 9   KDVNQQEFVRALAAFLKKSGKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHLYL 68

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R G+G+G   KIYGGR+RNG  P HF   S  V+R +LQ L+ + +++ DP GGR +T Q
Sbjct: 69  RGGVGVGSMIKIYGGRKRNGVCPSHFSVGSKNVARKVLQALEALKMVEKDPNGGRRLTPQ 128

Query: 170 GRRDLDQVAGTVPA 129
           G RDLD++AG V A
Sbjct: 129 GTRDLDRIAGQVAA 142

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>RS19_PIG (Q29308) 40S ribosomal protein S19 (Fragment)|
          Length = 135

 Score =  157 bits (396), Expect = 3e-38
 Identities = 73/130 (56%), Positives = 96/130 (73%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDVN  EFV+A +A LK+SGK+++PEWVD VK A  KEL P D +W+Y RAAS AR +YL
Sbjct: 6   KDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHLYL 65

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R G G+G   KIYGGRQRNG  P HF + S +V+R +LQ L+ + +++ D  GGR +T Q
Sbjct: 66  RGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQ 125

Query: 170 GRRDLDQVAG 141
           G+RDLD++AG
Sbjct: 126 GQRDLDRIAG 135

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>RS19_AEQIR (Q8ITC3) 40S ribosomal protein S19|
          Length = 144

 Score =  156 bits (395), Expect = 4e-38
 Identities = 68/132 (51%), Positives = 97/132 (73%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDV+ H F KA +A LK+SGKM++PEW  I+K ++F EL P D DW+Y RAAS+ R +Y+
Sbjct: 6   KDVDSHTFTKALAAFLKKSGKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHLYI 65

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R   G+G   KIYG R+RNG+ P H+C+SSG+V+R +LQ L+   +++ D  GGR +TSQ
Sbjct: 66  RSPAGVGALTKIYGDRKRNGTVPSHYCRSSGSVARRVLQALETQKLVEKDANGGRKLTSQ 125

Query: 170 GRRDLDQVAGTV 135
           G++DLD++A  V
Sbjct: 126 GQKDLDRIAAQV 137

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>RS19_PAGMA (P61155) 40S ribosomal protein S19|
          Length = 146

 Score =  156 bits (394), Expect = 5e-38
 Identities = 72/134 (53%), Positives = 98/134 (73%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDVN  EFV+A +A LK+SGK+++P+WVD+VK  + KEL P+D +W+YIR+AS  R +YL
Sbjct: 7   KDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHLYL 66

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R G G+G   KIYG RQRNG  P H+   S  V+R +LQ L+ + +I+ DP GGR +T+Q
Sbjct: 67  RGGAGVGSMTKIYGSRQRNGVCPAHYSVGSKNVARKVLQALELLKMIEKDPNGGRRLTAQ 126

Query: 170 GRRDLDQVAGTVPA 129
           G RDLD++AG V A
Sbjct: 127 GTRDLDRIAGQVAA 140

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>RS19_EMENI (P27073) 40S ribosomal protein S19 (S16)|
          Length = 148

 Score =  154 bits (388), Expect = 3e-37
 Identities = 71/136 (52%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           +DV+  +F+ AY+A LKR GK+ +P WVD VKT+   ELPP DADWYY+RAA++AR IYL
Sbjct: 7   RDVDAQKFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHIYL 66

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVD-PKGGRLITS 174
           R+ +G+G  +K++G  +  GSRP H   +SGAV R +LQ L+K+G+++ D  KGGR IT 
Sbjct: 67  RKTVGVGRLRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRITQ 126

Query: 173 QGRRDLDQVAGTVPAE 126
            G+RDLD++A T   E
Sbjct: 127 SGQRDLDRIAKTTVDE 142

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>RS19B_SCHPO (P79016) 40S ribosomal protein S19-B (S16-B)|
          Length = 143

 Score =  152 bits (385), Expect = 6e-37
 Identities = 68/129 (52%), Positives = 93/129 (72%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDV+  +F+ AY+A LKRSGKM  P+W+DIVKT   KEL P D DWYY+RAA++AR IYL
Sbjct: 7   KDVDAQQFINAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYL 66

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R+ +G+G   K+YGG    G RP H    SG+V R ++Q L+K+G+++    GGR I+ Q
Sbjct: 67  RKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQ 126

Query: 170 GRRDLDQVA 144
           G+RDLD++A
Sbjct: 127 GQRDLDRIA 135

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>RS19A_SCHPO (P58234) 40S ribosomal protein S19-A (S16-A)|
          Length = 144

 Score =  152 bits (383), Expect = 1e-36
 Identities = 68/129 (52%), Positives = 93/129 (72%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDV+  +F+ AY+A LKRSGKM  P+W+DIVKT   KEL P D DWYY+RAA++AR IYL
Sbjct: 7   KDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYL 66

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R+ +G+G   K+YGG    G RP H    SG+V R ++Q L+K+G+++    GGR I+ Q
Sbjct: 67  RKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQ 126

Query: 170 GRRDLDQVA 144
           G+RDLD++A
Sbjct: 127 GQRDLDRIA 135

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>RS19A_DROME (P39018) 40S ribosomal protein S19a|
          Length = 155

 Score =  140 bits (354), Expect = 2e-33
 Identities = 61/132 (46%), Positives = 92/132 (69%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KD++ H   KA +  LK++GK+++P+ +DIVKTA+FKEL P D DW+Y+R AS+ R +Y 
Sbjct: 6   KDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYH 65

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R   G+G   KIYGGR+RNG  P HFC+++   +R  LQ L+   +++  P GGR ++S 
Sbjct: 66  RSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSI 125

Query: 170 GRRDLDQVAGTV 135
           G+RDLD++A  +
Sbjct: 126 GQRDLDRIANQI 137

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>RS19B_YEAST (P07281) 40S ribosomal protein S19-B (S16B) (YS16) (RP55)|
          Length = 143

 Score =  140 bits (354), Expect = 2e-33
 Identities = 63/130 (48%), Positives = 97/130 (74%), Gaps = 1/130 (0%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDAD-WYYIRAASMARKIY 354
           +DV   +F+ AY++ L+R GK+E+P +VDIVKT+   E+PP DA+ W+Y RAAS+AR IY
Sbjct: 6   RDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIY 65

Query: 353 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 174
           +R+ +G+G   K+YGG +  G RP     +SG+++R +LQ L+K+GI+++ PKGGR I+ 
Sbjct: 66  MRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISE 125

Query: 173 QGRRDLDQVA 144
            G+RDLD++A
Sbjct: 126 NGQRDLDRIA 135

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>RS19A_YEAST (P07280) 40S ribosomal protein S19-A (S16A) (YS16) (RP55) (YP45)|
          Length = 143

 Score =  140 bits (354), Expect = 2e-33
 Identities = 63/130 (48%), Positives = 97/130 (74%), Gaps = 1/130 (0%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDAD-WYYIRAASMARKIY 354
           +DV   +F+ AY++ L+R GK+E+P +VDIVKT+   E+PP DA+ W+Y RAAS+AR IY
Sbjct: 6   RDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIY 65

Query: 353 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 174
           +R+ +G+G   K+YGG +  G RP     +SG+++R +LQ L+K+GI+++ PKGGR I+ 
Sbjct: 66  MRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISE 125

Query: 173 QGRRDLDQVA 144
            G+RDLD++A
Sbjct: 126 NGQRDLDRIA 135

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>RS19S_ASCSU (P39698) 40S ribosomal protein S19S|
          Length = 150

 Score =  140 bits (352), Expect = 4e-33
 Identities = 62/130 (47%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDV+ HE V+  +  LK+SGK+++PEW D+VK    KEL P D+DWYY+R AS+AR++Y+
Sbjct: 8   KDVDQHEIVRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYI 67

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLITS 174
           R   G+G  +++YGG +R G  P HF ++SG+V R  LQ L+ +  ++  P G GR++T 
Sbjct: 68  RSPTGVGALRRVYGGNKRRGVTPNHFARASGSVIRKALQTLEAIKWVEKHPDGNGRILTK 127

Query: 173 QGRRDLDQVA 144
           QGR+DLD++A
Sbjct: 128 QGRKDLDRIA 137

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>RS19_ENTHI (O15631) 40S ribosomal protein S19|
          Length = 148

 Score =  135 bits (340), Expect = 1e-31
 Identities = 65/129 (50%), Positives = 90/129 (69%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDV   +F+KAY+ HLK+SGK+E+PEWVD VKT   KEL P + DW YIRAA++ARK+YL
Sbjct: 8   KDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYL 67

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
             GIG+   ++ YG +      P H    SG V+R ILQ+L+KMGI+    + GR +T +
Sbjct: 68  NNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVG-KIQSGRSLTKE 126

Query: 170 GRRDLDQVA 144
           GR+D+D++A
Sbjct: 127 GRKDMDKIA 135

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>RS19_CAEEL (O18650) 40S ribosomal protein S19|
          Length = 146

 Score =  130 bits (327), Expect = 3e-30
 Identities = 63/130 (48%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDV+ HE  K+ +  LK+SGK+++PEW D+VK    KEL P D DW+Y RAAS+AR +Y 
Sbjct: 8   KDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYF 67

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLITS 174
           R   GIG F+K+YGG +R G  P HF  S+G   R  +Q+L+K+  ++  P G GR+++ 
Sbjct: 68  RPA-GIGAFKKVYGGNKRRGVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHPDGKGRILSK 126

Query: 173 QGRRDLDQVA 144
           QGR+DLD++A
Sbjct: 127 QGRKDLDRIA 136

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>RS19B_DROME (Q7KS38) 40S ribosomal protein S19b|
          Length = 154

 Score =  130 bits (326), Expect = 4e-30
 Identities = 60/135 (44%), Positives = 87/135 (64%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           K+++ H   K  +A LK+SGK+ +PE    +KT +FKE  PTD DW+Y R AS+ R +YL
Sbjct: 6   KEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYL 65

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQ 171
           R   G+G F K+Y GR+RNG RP   C+SS    R  LQ L+   +++  P GGR +T Q
Sbjct: 66  RSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQ 125

Query: 170 GRRDLDQVAGTVPAE 126
           G+R+LD++A  + A+
Sbjct: 126 GQRNLDRIANKIVAK 140

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>RS19G_ASCSU (P24494) 40S ribosomal protein S19G (Eliminated protein NO. 1)|
          Length = 148

 Score =  130 bits (326), Expect = 4e-30
 Identities = 60/130 (46%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
 Frame = -1

Query: 530 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 351
           KDV+ HE V+  +  LK+SGK+++PEW D+ K    KEL P ++DWYY+R AS+AR++Y+
Sbjct: 8   KDVDQHEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTASIARRLYV 67

Query: 350 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLITS 174
           R   G+   + +YGG +R G  P HF K+SG+V R  LQ L+ +  +   P G GR++T 
Sbjct: 68  RSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDGNGRVLTK 127

Query: 173 QGRRDLDQVA 144
           QGR+DLD++A
Sbjct: 128 QGRKDLDRIA 137

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>RS19E_METJA (P54057) 30S ribosomal protein S19e|
          Length = 148

 Score =  108 bits (269), Expect = 2e-23
 Identities = 57/143 (39%), Positives = 86/143 (60%)
 Frame = -1

Query: 527 DVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLR 348
           DV   + ++  +  LK    + +PEWVD VKT   +E  P   DW+YIR AS+ RKIY+ 
Sbjct: 6   DVPADKLIQKTAEKLKEMN-IGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKIYIY 64

Query: 347 QGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQG 168
             +G+   +  YGGR+  G  P HF K SG + R  LQEL+K+G+++  P+ GR++T +G
Sbjct: 65  GPVGVSRLRTAYGGRKNRGHEPEHFYKGSGNIIRKALQELEKLGLVEKTPE-GRVVTPKG 123

Query: 167 RRDLDQVAGTVPAEF*SVEVPSM 99
           R  LD +A  V  E  + E+P++
Sbjct: 124 RSFLDNIAKEVRDEIIN-EIPAL 145

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>RS19E_METTH (O27653) 30S ribosomal protein S19e|
          Length = 145

 Score =  106 bits (265), Expect = 5e-23
 Identities = 53/139 (38%), Positives = 83/139 (59%)
 Frame = -1

Query: 527 DVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLR 348
           DV     +   +  LK   K++ PEWV+ VKT   KE  P + DW+Y+RAA++ R++Y+ 
Sbjct: 6   DVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYID 65

Query: 347 QGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQG 168
             +G+   +  YGG++  GSRP  F + SGA+ R  LQ+L++ G+I  + + GR+IT +G
Sbjct: 66  GPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKRE-ENGRVITPEG 124

Query: 167 RRDLDQVAGTVPAEF*SVE 111
           R  LD+ A  V  E   +E
Sbjct: 125 RSFLDKAAAEVKKEVEGLE 143

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>RS19E_AERPE (Q9YD22) 30S ribosomal protein S19e|
          Length = 153

 Score =  104 bits (260), Expect = 2e-22
 Identities = 54/112 (48%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
 Frame = -1

Query: 458 PEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLR-QGIGIGGFQKIYGGRQRNGSRP 282
           P W    KT   KE PPTD DW+Y+RAAS+ RK+Y   + IGI  F+ IYGGRQ  GS P
Sbjct: 30  PAWAYFAKTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAP 89

Query: 281 PHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 126
            HF K+ G+V R ILQ+L++ G++   P  GR I+  GR  LD  A  +  E
Sbjct: 90  EHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLDTTAREIMEE 141

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>RS19E_ARCFU (O28210) 30S ribosomal protein S19e|
          Length = 147

 Score =  102 bits (255), Expect = 7e-22
 Identities = 51/121 (42%), Positives = 77/121 (63%)
 Frame = -1

Query: 458 PEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPP 279
           PEW   VKT   KE  P   DW+Y+R AS+ R++Y+   +GI   +  YGGR+R GS+PP
Sbjct: 27  PEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPP 86

Query: 278 HFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SVEVPSM 99
            F K SGA+ RN L +L+++G +    + GR++T  GR  LD+VA  + +E  S E+P++
Sbjct: 87  KFRKGSGAIVRNALHQLEQLGFVK-KTREGRVVTPMGRSFLDKVATELKSELVS-EIPAL 144

Query: 98  K 96
           +
Sbjct: 145 E 145

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>RS19E_PYRHO (O59041) 30S ribosomal protein S19e|
          Length = 150

 Score =  101 bits (251), Expect = 2e-21
 Identities = 52/144 (36%), Positives = 80/144 (55%)
 Frame = -1

Query: 527 DVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLR 348
           DV     V+  +  LK   +++ PEW   VKT R KE  P   DW+Y R AS+ R++Y+ 
Sbjct: 6   DVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYID 65

Query: 347 QGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQG 168
             +GI   +  YGGR+  G  P  F K+ G++ R  LQ+L+  G I+  P  GR++T +G
Sbjct: 66  GPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKG 125

Query: 167 RRDLDQVAGTVPAEF*SVEVPSMK 96
           R  LD++A  +  E   + +P +K
Sbjct: 126 RSFLDKIATELKKELEEI-IPELK 148

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>RS19E_THEVO (Q97CU4) 30S ribosomal protein S19e|
          Length = 150

 Score = 85.9 bits (211), Expect = 9e-17
 Identities = 45/117 (38%), Positives = 63/117 (53%)
 Frame = -1

Query: 494 SAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKI 315
           S  LK   K++ P WV  VKT   KE PP   DW Y+RAASM RK+Y+   +GI      
Sbjct: 17  SGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSE 76

Query: 314 YGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 144
           YGG+   GS+  H    S +++R +  EL+  G++    K GR ++ QG   LD  +
Sbjct: 77  YGGKVDRGSKRYHAASGSRSITRFLFHELESAGLVQKTQK-GRSLSPQGMSLLDNAS 132

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>RS19E_HALMA (P19952) 30S ribosomal protein S19e (HS12) (E1.3)|
          Length = 152

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
 Frame = -1

Query: 527 DVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLR 348
           DV P E ++A +  L     +E P+W +  KT   +ELPP   D++  RAAS+ RK+ + 
Sbjct: 5   DVPPEELIEALTETLADEDDIEAPDWAEFTKTGVDRELPPEQEDFWTRRAASLLRKVAVD 64

Query: 347 QGIGIGGFQKIYG----GRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLI 180
             +G+   +  YG    G  R   RP    K SG + R  LQ+L+  G ++     GR +
Sbjct: 65  GPVGVNALRSEYGTSKQGTTRYRVRPHQKTKGSGNIIRTALQQLEDAGYVETSENDGRRV 124

Query: 179 TSQGRRDLDQVAGTVPAE 126
           T  GR  LD  AG +  E
Sbjct: 125 TGDGRSLLDDTAGDLLTE 142

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>RS19E_THEAC (Q9HM21) 30S ribosomal protein S19e|
          Length = 150

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 43/117 (36%), Positives = 63/117 (53%)
 Frame = -1

Query: 494 SAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKI 315
           S  LK   K+  P+W   VKT   +E  P + DW Y+RAA+M RK+Y+   +GI      
Sbjct: 17  SEKLKSEKKIAEPDWSKYVKTGISREKSPVNRDWIYVRAAAMLRKLYINGYLGISRMSSE 76

Query: 314 YGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 144
           YGG+   GS+  H  + S ++ R +  EL+K G +   PK GR ++ QG   LD  +
Sbjct: 77  YGGKVDRGSKRYHAAQGSRSIIRYLFHELEKAGYVQKTPK-GRSLSPQGMSLLDNAS 132

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>LCE1A_HUMAN (Q5T7P2) Late cornified envelope protein 1A (Late envelope protein|
           1)
          Length = 110

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +2

Query: 224 SATPEGCCGKQHHCSCRSVGGVNRSSDGHHRSSGIHQSQFPASGRSSLPS 373
           S +  GCCG      C S GG    S  HHR    H+ +  +SG  S PS
Sbjct: 45  SVSSGGCCGSSSGGGCSSGGGGCCLS--HHRRHRSHRHRLQSSGCCSQPS 92

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>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3703

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +1

Query: 73   PNPTTEHNFIDGTSTDQNSAGTVPATWSRSRLPWEVMSLPPLGS 204
            P+P +       T+++ +SAG  P++   S++P E + +PPLG+
Sbjct: 1652 PSPVSTSGSNTFTTSNPSSAGIAPSSNLLSQVPTESVGMPPLGN 1695

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>STP2_CANFA (O77645) Nuclear transition protein 2 (TP-2) (TP2)|
          Length = 129

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
 Frame = +2

Query: 221 SSATPEG--C--CGKQHHC-----SCRSVGGVNRSSDGHHRSSGIHQSQFPASGRSSLPS 373
           S++ P+G  C  C    HC     SC      ++S  GHH SSG HQSQ P     +LP 
Sbjct: 17  SNSRPQGHTCSQCTCSSHCQTCSQSCSQSRSSSQSPTGHHSSSG-HQSQSP---HPTLPP 72

Query: 374 R 376
           R
Sbjct: 73  R 73

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>TRPF_SACKU (Q5XQP9) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)|
           (PRAI)
          Length = 226

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -1

Query: 275 FCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 135
           F  + G    N+   LQ  G+I VD  GG  + + G +D+D++   V
Sbjct: 175 FMLAGGLTPENVSDALQLHGVIGVDVSGG--VETNGMKDMDKITNFV 219

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>LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late envelope protein|
           3)
          Length = 118

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
 Frame = +2

Query: 224 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 373
           S +  GCCG     SC S  G   SS G      HHR    H  +  +SG  S PS
Sbjct: 45  SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPS 100

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>LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late envelope protein|
           2) (Small proline-rich-like epidermal differentiation
           complex protein 2A)
          Length = 118

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
 Frame = +2

Query: 224 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 373
           S +  GCCG     SC S  G   SS G      HHR    H  +  +SG  S PS
Sbjct: 45  SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPS 100

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>HMD_METVO (Q50840) 5,10-methenyltetrahydromethanopterin hydrogenase (EC|
           1.12.98.2) (H(2)-forming
           N(5),N(10)-methylenetetrahydromethanopterin
           dehydrogenase)
           (N(5),N(10)-methenyltetrahydromethanopterin hydrogenase)
           (H(2)-dependent methylene-H(4)MPT dehydro
          Length = 343

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
 Frame = -1

Query: 512 EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELP-PTDADWYYIRAASMARKIYLRQGIG 336
           ++ K   AHL    +  +PE  D VK A+ KELP P  A  +++    +  K+       
Sbjct: 80  DYAKVMEAHLAGKAEEVMPEIRDAVK-AKAKELPKPPKACIHFVNPEKVGLKVTADDKDA 138

Query: 335 IGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIID-----VDPKGGRLITSQ 171
           +     +     + GS+P        A+    +  +++  I+        PK  ++    
Sbjct: 139 VKDADIVITWLPKGGSQP--------AIIEKFVANIKEGAIVTHACTIPTPKFAKIFKDL 190

Query: 170 GRRDLDQVA---GTVP 132
           GR DL+ ++   G VP
Sbjct: 191 GRDDLNIISYHPGAVP 206

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>LCE1F_HUMAN (Q5T754) Late cornified envelope protein 1F (Late envelope protein|
           6)
          Length = 118

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 6/61 (9%)
 Frame = +2

Query: 224 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPSRQP* 385
           S +  GCCG      C S GG   SS G      HHR    H+ +  +S   S PS    
Sbjct: 45  SVSSGGCCGSSSGGCCSSGGGGCCSSGGGGCCLSHHRRRRSHRHRPQSSDCCSQPSAGSS 104

Query: 386 C 388
           C
Sbjct: 105 C 105

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>RPOC_SYMTH (Q67JT4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1179

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -1

Query: 521 NPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWY 390
           +PHE + AY     ++G +EL +WV+I      K+L P   +W+
Sbjct: 517 HPHEALLAY-----QNGLVELHDWVEIRFPEPPKDLEPYSEEWW 555

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>GAL1_PYRKO (Q5JEK8) Galactokinase (EC 2.7.1.6) (Galactose kinase)|
          Length = 350

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
 Frame = -1

Query: 518 PHEFVKAYSAHLKRSGKMELPE------WVDIVK 435
           PHE V+ YS H K+S   EL +      W D VK
Sbjct: 38  PHERVELYSEHFKKSVSFELEKLEKGNNWADYVK 71

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>PPGK_MYCLE (Q49988) Polyphosphate glucokinase (EC 2.7.1.63)|
           (Polyphosphate--glucose phosphotransferase)
          Length = 324

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 55  HNSKL*PNPTTEHNFIDGTSTDQNSAGTVPATWSRSRLPW 174
           HN KL PN    H  +DG   +Q +A +V   +  S   W
Sbjct: 218 HNGKLIPNTEFGHLEVDGKEAEQRAASSVKDKYKWSYRTW 257

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>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)|
            (CDP) (Homeobox protein Clox) (Clox-1) (Fragment)
          Length = 975

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +2

Query: 248  GKQHHCSCRSVGGVNRSSDGHHRSSGIHQSQFPASGR--SSLPS 373
            G + + S  + GG  R+ DG HRSS +  +  PA+ R  SSL S
Sbjct: 885  GGRRYLSRPARGGPCRARDGAHRSSALPSTSAPAAARRPSSLQS 928

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>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 932

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 20/42 (47%), Positives = 22/42 (52%)
 Frame = +2

Query: 293 RSSDGHHRSSGIHQSQFPASGRSSLPSRQP*CSTSQRQ*AAA 418
           R SDG   SS   Q Q       SLP R+P  STSQ+  AAA
Sbjct: 647 RQSDGTPYSSA--QPQRDTRSIGSLPEREPSASTSQKDLAAA 686

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>DDL_MYCSM (Q9ZGN0) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 373

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = -1

Query: 317 IYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGT 138
           +YGGR    S     C S+G++ RN+  E  ++  I + P G  ++T      L    G 
Sbjct: 16  VYGGRS---SEHAISCVSAGSILRNLDPERFEVVAIGITPDGSWVLTDGRPETLAITDGK 72

Query: 137 VPA 129
           +PA
Sbjct: 73  LPA 75

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>YDHC_BACSU (O05494) Hypothetical transcriptional regulator ydhC|
          Length = 224

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
 Frame = -1

Query: 317 IYGGRQRNGSR--PPHFCKSSGAVSRNILQE----LQKMGIIDVDPKGGRLITSQGRRDL 156
           I+ G  + G R       KS G VSR+ ++E    L+K G++  D + G  ITS   +D+
Sbjct: 24  IFNGTFKPGERINETQLAKSFG-VSRSPIREAMRLLEKDGLLKADDRNGFSITSLTAKDV 82

Query: 155 DQVAG-TVPAEF*SVEV 108
           D++    +P E  +VE+
Sbjct: 83  DEIYKIRIPLEQLAVEL 99

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>LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late envelope protein|
           5)
          Length = 118

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
 Frame = +2

Query: 224 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 373
           S +  GCCG     SC S  G   SS G      HHR    H+ +  +S   S PS
Sbjct: 45  SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDCCSQPS 100


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,120,144
Number of Sequences: 219361
Number of extensions: 1688971
Number of successful extensions: 5405
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 5191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5386
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result