| Clone Name | rbags20f09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog | 30 | 4.9 | 2 | ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog | 30 | 4.9 | 3 | BBC3_HUMAN (Q9BXH1) Bcl-2-binding component 3 (p53 up-regulated ... | 30 | 6.3 | 4 | NECD_HUMAN (Q99608) Necdin | 30 | 6.3 | 5 | LPIN2_HUMAN (Q92539) Lipin-2 | 30 | 8.3 |
|---|
>ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog| Length = 328 Score = 30.4 bits (67), Expect = 4.9 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Frame = -1 Query: 160 PPSR*PEDGARPGDGPSA--LQEAPAVHQEEPILQEFP 53 PPS+ P+ A+P PSA Q A V + EP+++E P Sbjct: 146 PPSQAPQPVAQPAPPPSAQTFQPAEPVVEAEPVVEEAP 183
>ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog| Length = 328 Score = 30.4 bits (67), Expect = 4.9 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Frame = -1 Query: 160 PPSR*PEDGARPGDGPSA--LQEAPAVHQEEPILQEFP 53 PPS+ P+ A+P PSA Q A V + EP+++E P Sbjct: 146 PPSQAPQPVAQPAPPPSAQTFQPAEPVVEAEPVVEEAP 183
>BBC3_HUMAN (Q9BXH1) Bcl-2-binding component 3 (p53 up-regulated modulator of| apoptosis) (JFY-1) Length = 193 Score = 30.0 bits (66), Expect = 6.3 Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 3/66 (4%) Frame = +3 Query: 459 ALASGACTPGWESXXXXXXXXXXXVSCGSEGPRLVSA---GSRWASSCGGAS*RAEGQSP 629 A++ G C PG + C P V+A GSRW GG R G P Sbjct: 34 AVSCGLCEPGLAAAPAAPTLLPAAYLCAPTAPPAVTAALGGSRWP---GGPRSRPRGPRP 90 Query: 630 GSERPS 647 +PS Sbjct: 91 DGPQPS 96
>NECD_HUMAN (Q99608) Necdin| Length = 321 Score = 30.0 bits (66), Expect = 6.3 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -1 Query: 652 PSEGRSEPGD*PSALQEAPPQEEAHRDPALTSRGPSLP 539 P + ++ GD P ALQ+A + AH+ P+ GP+ P Sbjct: 57 PPQAPNDEGD-PKALQQAAEEGRAHQAPSAAQPGPAPP 93
>LPIN2_HUMAN (Q92539) Lipin-2| Length = 896 Score = 29.6 bits (65), Expect = 8.3 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = -1 Query: 175 PDTDLPPSR*PEDGARPGDGPSALQEAPAVHQEEPILQEFPPCPGGYKAIDHGATXSH 2 P +DLP S GARP + S+ E +E + P P + HG+T S+ Sbjct: 583 PASDLPSSSKEPAGARPAENDSSSDEGSQELEESITVDPIPTEP-----LSHGSTTSY 635 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,517,219 Number of Sequences: 219361 Number of extensions: 865697 Number of successful extensions: 2759 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2541 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2754 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6257125380 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)