| Clone Name | rbags20f08 |
|---|---|
| Clone Library Name | barley_pub |
>ERD2_PETHY (Q9ZTN2) ER lumen protein retaining receptor (HDEL receptor)| (PGP169-12) Length = 215 Score = 198 bits (504), Expect = 1e-50 Identities = 88/103 (85%), Positives = 96/103 (93%) Frame = -2 Query: 644 ERFTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRY 465 E+FTF+EVMW FSIYLEAVAILPQLVLLQRTRNIDNLTGQY+F LGAYR YILNW+YRY Sbjct: 113 EKFTFKEVMWTFSIYLEAVAILPQLVLLQRTRNIDNLTGQYIFLLGAYRSFYILNWVYRY 172 Query: 464 FTEPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELPA 336 FTEPHFVHWI+WIAG++QT+LYADFFYYY SWKNN KLELPA Sbjct: 173 FTEPHFVHWITWIAGLIQTLLYADFFYYYFQSWKNNTKLELPA 215
>ERD2_ARATH (P35402) ER lumen protein retaining receptor (HDEL receptor)| Length = 215 Score = 174 bits (442), Expect = 2e-43 Identities = 80/103 (77%), Positives = 90/103 (87%) Frame = -2 Query: 644 ERFTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRY 465 E+FT +EV WAFSIYLEAVAILPQLVLLQR+ N+DNLTGQYV FLGAYR LYI+NWIYRY Sbjct: 113 EKFTVQEVFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVVFLGAYRGLYIINWIYRY 172 Query: 464 FTEPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELPA 336 FTE HF WI+ ++G+VQT LYADFFYYY ISWK N KL+LPA Sbjct: 173 FTEDHFTRWIACVSGLVQTALYADFFYYYYISWKTNTKLKLPA 215
>ERD2_CAEEL (P48583) ER lumen protein retaining receptor| Length = 213 Score = 122 bits (305), Expect = 1e-27 Identities = 59/88 (67%), Positives = 69/88 (78%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFT 459 F F EVMW FSIYLEAVAI+PQL +L RT N + +T Y+F LG+YR LYILNW+YRY+T Sbjct: 113 FIFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYILNWVYRYYT 172 Query: 458 EPHFVHWISWIAGIVQTMLYADFFYYYI 375 E F IS +AGIVQT+LYADFFY YI Sbjct: 173 E-SFFDPISVVAGIVQTVLYADFFYLYI 199
>ERD2_ENTHI (O44017) ER lumen protein retaining receptor| Length = 215 Score = 121 bits (303), Expect = 2e-27 Identities = 54/102 (52%), Positives = 72/102 (70%) Frame = -2 Query: 644 ERFTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRY 465 E ++ E+ W FSI+LEAVAILPQ++LL+ T ++NL QY+F LG YR LYI+NWIYRY Sbjct: 113 EDYSITEICWTFSIFLEAVAILPQILLLRSTGEVENLNSQYIFCLGLYRALYIINWIYRY 172 Query: 464 FTEPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELP 339 TE + ++WI G +QT+LY ++FYYYI S K LP Sbjct: 173 ATEQSYWSPLTWICGSIQTLLYVEYFYYYIKSRVEGTKFVLP 214
>ERD2_DROME (O76767) ER lumen protein retaining receptor| Length = 212 Score = 120 bits (300), Expect = 4e-27 Identities = 57/101 (56%), Positives = 72/101 (71%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFT 459 FT EV+W FSIYLE+VAILPQL L+ RT +++T Y+F LG+YR LY+LNW+YRY Sbjct: 113 FTVMEVLWTFSIYLESVAILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMV 172 Query: 458 EPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELPA 336 E H+ I+ AG+VQT+LY DFFY YI KL+LPA Sbjct: 173 ESHY-DLIAIFAGVVQTVLYCDFFYLYITKVLKGKKLQLPA 212
>ERD2_PLAFA (P33948) ER lumen protein retaining receptor| Length = 221 Score = 115 bits (289), Expect = 8e-26 Identities = 50/101 (49%), Positives = 73/101 (72%), Gaps = 1/101 (0%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRY-F 462 + ++W+FSI+LE+VAILPQLVLL++ R ++N+T YV +G YR YILNWIYRY F Sbjct: 116 YNLYNILWSFSIWLESVAILPQLVLLEKQREVENITSHYVITMGLYRAFYILNWIYRYFF 175 Query: 461 TEPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELP 339 + +++ + WI G++QT+LY DFFYY+ ++ KL LP Sbjct: 176 DDKPYINVVGWIGGLIQTLLYIDFFYYFALAKWYGKKLVLP 216
>ERD2_PLAF7 (Q76NM1) ER lumen protein retaining receptor| Length = 221 Score = 115 bits (289), Expect = 8e-26 Identities = 50/101 (49%), Positives = 73/101 (72%), Gaps = 1/101 (0%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRY-F 462 + ++W+FSI+LE+VAILPQLVLL++ R ++N+T YV +G YR YILNWIYRY F Sbjct: 116 YNLYNILWSFSIWLESVAILPQLVLLEKQREVENITSHYVITMGLYRAFYILNWIYRYFF 175 Query: 461 TEPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELP 339 + +++ + WI G++QT+LY DFFYY+ ++ KL LP Sbjct: 176 DDKPYINVVGWIGGLIQTLLYIDFFYYFALAKWYGKKLVLP 216
>ERD22_CAEEL (Q09473) Putative ER lumen protein retaining receptor C28H8.4| Length = 213 Score = 112 bits (279), Expect = 1e-24 Identities = 58/97 (59%), Positives = 71/97 (73%), Gaps = 1/97 (1%) Frame = -2 Query: 626 EVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFTEPHF 447 E++W FSIYLEAVAILPQL LLQ T + + +T Y+F LG+YR LYI NWIYRY+TE +F Sbjct: 117 ELLWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFALGSYRALYIFNWIYRYYTEDYF 176 Query: 446 VHWISWIAGIVQTMLYADFFYYYIISWKNNVK-LELP 339 I +AGIVQT+LYADFFY Y+ K +ELP Sbjct: 177 -DPIVVVAGIVQTVLYADFFYLYVTRVVQTRKGMELP 212
>ERD2_XENLA (O42580) ER lumen protein retaining receptor (KDEL receptor) (KDEL| endoplasmic reticulum protein retention receptor) Length = 214 Score = 110 bits (275), Expect = 4e-24 Identities = 52/100 (52%), Positives = 70/100 (70%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFT 459 FT E++W FSIYLE+VAILPQL ++ +T +++T Y+FFLG YRVLY+ NWI+RY T Sbjct: 113 FTPLEILWTFSIYLESVAILPQLFMISKTGEAESITTHYLFFLGLYRVLYLANWIWRYHT 172 Query: 458 EPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELP 339 E F I+ ++G+VQT+ Y DFFY Y+ KL LP Sbjct: 173 E-KFYDQIAVVSGVVQTIFYFDFFYLYVTKVLKGKKLSLP 211
>ERD22_RAT (Q5U305) ER lumen protein retaining receptor 2 (KDEL receptor 2)| (KDEL endoplasmic reticulum protein retention receptor 2) Length = 212 Score = 110 bits (274), Expect = 5e-24 Identities = 52/101 (51%), Positives = 71/101 (70%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFT 459 F+ E++W FSIYLE+VAILPQL ++ +T + +T Y+FFLG YR LY++NWI+R++ Sbjct: 113 FSPLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRFYF 172 Query: 458 EPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELPA 336 E F I+ +AG+VQT+LY DFFY YI KL LPA Sbjct: 173 E-GFFDLIAVVAGVVQTILYCDFFYLYITKVLKGKKLSLPA 212
>ERD22_MOUSE (Q9CQM2) ER lumen protein retaining receptor 2 (KDEL receptor 2)| (KDEL endoplasmic reticulum protein retention receptor 2) Length = 212 Score = 110 bits (274), Expect = 5e-24 Identities = 52/101 (51%), Positives = 71/101 (70%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFT 459 F+ E++W FSIYLE+VAILPQL ++ +T + +T Y+FFLG YR LY++NWI+R++ Sbjct: 113 FSPLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRFYF 172 Query: 458 EPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELPA 336 E F I+ +AG+VQT+LY DFFY YI KL LPA Sbjct: 173 E-GFFDLIAVVAGVVQTILYCDFFYLYITKVLKGKKLSLPA 212
>ERD22_HUMAN (P33947) ER lumen protein retaining receptor 2 (KDEL receptor 2)| (KDEL endoplasmic reticulum protein retention receptor 2) (ERD2-like protein 1) (ELP-1) Length = 212 Score = 110 bits (274), Expect = 5e-24 Identities = 52/101 (51%), Positives = 71/101 (70%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFT 459 F+ E++W FSIYLE+VAILPQL ++ +T + +T Y+FFLG YR LY++NWI+R++ Sbjct: 113 FSPLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRFYF 172 Query: 458 EPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELPA 336 E F I+ +AG+VQT+LY DFFY YI KL LPA Sbjct: 173 E-GFFDLIAVVAGVVQTILYCDFFYLYITKVLKGKKLSLPA 212
>ERD23_HUMAN (O43731) ER lumen protein retaining receptor 3 (KDEL receptor 3)| (KDEL endoplasmic reticulum protein retention receptor 3) Length = 214 Score = 109 bits (272), Expect = 8e-24 Identities = 51/100 (51%), Positives = 68/100 (68%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFT 459 FT E++W FSIYLE+VAILPQL ++ +T + +T Y+FFLG YR LY+ NWI RY T Sbjct: 113 FTLLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLANWIRRYQT 172 Query: 458 EPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELP 339 E +F I+ ++G+VQT+ Y DFFY Y+ KL LP Sbjct: 173 E-NFYDQIAVVSGVVQTIFYCDFFYLYVTKVLKGKKLSLP 211
>ERD23_MOUSE (Q8R1L4) ER lumen protein retaining receptor 3 (KDEL receptor 3)| (KDEL endoplasmic reticulum protein retention receptor 3) Length = 214 Score = 108 bits (271), Expect = 1e-23 Identities = 52/100 (52%), Positives = 69/100 (69%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFT 459 +T EV+W FSIYLE+VAILPQL ++ +T + +T Y+FFLG YR+LY+ NWI RY T Sbjct: 113 YTPMEVLWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRLLYLANWIRRYQT 172 Query: 458 EPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELP 339 E +F IS ++G+VQT+ Y DFFY Y+ KL LP Sbjct: 173 E-NFYDQISVVSGVVQTIFYCDFFYLYVTKVLKGKKLSLP 211
>ERD21_MOUSE (Q99JH8) ER lumen protein retaining receptor 1 (KDEL receptor 1)| (KDEL endoplasmic reticulum protein retention receptor 1) Length = 212 Score = 108 bits (270), Expect = 1e-23 Identities = 53/101 (52%), Positives = 68/101 (67%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFT 459 FT E++W FSIYLE+VAILPQL ++ +T + +T Y+F LG YR LY+ NWI+RY Sbjct: 113 FTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHF 172 Query: 458 EPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELPA 336 E F I+ +AG+VQT+LY DFFY YI KL LPA Sbjct: 173 E-GFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGKKLSLPA 212
>ERD21_HUMAN (P24390) ER lumen protein retaining receptor 1 (KDEL receptor 1)| (KDEL endoplasmic reticulum protein retention receptor 1) Length = 212 Score = 108 bits (270), Expect = 1e-23 Identities = 53/101 (52%), Positives = 68/101 (67%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFT 459 FT E++W FSIYLE+VAILPQL ++ +T + +T Y+F LG YR LY+ NWI+RY Sbjct: 113 FTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHF 172 Query: 458 EPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELPA 336 E F I+ +AG+VQT+LY DFFY YI KL LPA Sbjct: 173 E-GFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGKKLSLPA 212
>ERD21_BOVIN (P33946) ER lumen protein retaining receptor 1 (KDEL receptor 1)| (KDEL endoplasmic reticulum protein retention receptor 1) Length = 212 Score = 108 bits (270), Expect = 1e-23 Identities = 53/101 (52%), Positives = 68/101 (67%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFT 459 FT E++W FSIYLE+VAILPQL ++ +T + +T Y+F LG YR LY+ NWI+RY Sbjct: 113 FTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHF 172 Query: 458 EPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELPA 336 E F I+ +AG+VQT+LY DFFY YI KL LPA Sbjct: 173 E-GFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGKKLSLPA 212
>ERD2_KLULA (P18413) ER lumen protein retaining receptor| Length = 219 Score = 103 bits (257), Expect = 4e-22 Identities = 52/102 (50%), Positives = 70/102 (68%), Gaps = 1/102 (0%) Frame = -2 Query: 641 RFTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYF 462 RF+F ++ W+FS++LE+VAILPQL +L +T LT Y+F LG YR LYI NWI+RY+ Sbjct: 118 RFSFIQICWSFSLWLESVAILPQLFMLTKTGKAKQLTSHYIFALGLYRALYIPNWIWRYY 177 Query: 461 TEPHFVHWISWIAGIVQTMLYADFFY-YYIISWKNNVKLELP 339 TE F +S G++QT++Y+DFFY YY K LELP Sbjct: 178 TEERF-DKLSVFTGVIQTLVYSDFFYIYYQKVIKLGGDLELP 218
>ERD2_YEAST (P18414) ER lumen protein retaining receptor (HDEL receptor)| Length = 219 Score = 101 bits (252), Expect = 2e-21 Identities = 46/88 (52%), Positives = 65/88 (73%) Frame = -2 Query: 641 RFTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYF 462 +FTF E+ W+FS++LE+VAILPQL +L + +LT Y+F +G YR LYI NWI+RY Sbjct: 118 KFTFLELAWSFSVWLESVAILPQLYMLSKGGKTRSLTVHYIFAMGLYRALYIPNWIWRYS 177 Query: 461 TEPHFVHWISWIAGIVQTMLYADFFYYY 378 TE + I++ AG++QT+LY+DFFY Y Sbjct: 178 TEDKKLDKIAFFAGLLQTLLYSDFFYIY 205
>ERD2_SCHPO (O94270) ER lumen protein retaining receptor| Length = 212 Score = 86.7 bits (213), Expect = 5e-17 Identities = 44/101 (43%), Positives = 63/101 (62%) Frame = -2 Query: 638 FTFREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFT 459 +T ++W FSI+LE+VAILPQL +LQR+ ++LT Y+F + YR LYI +WIYR Sbjct: 113 YTISNILWTFSIWLESVAILPQLFMLQRSGETESLTAHYLFAMCLYRGLYIPHWIYRIAV 172 Query: 458 EPHFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKLELPA 336 + ++ +AGI+QT+LY DF Y + K LPA Sbjct: 173 HKKVI-GVAILAGIIQTVLYGDFAVVYRRTVLQGKKFRLPA 212
>TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (TIF1-gamma)| (RET-fused gene 7 protein) (Rfg7 protein) (Tripartite motif protein 33) Length = 1127 Score = 31.2 bits (69), Expect = 2.7 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Frame = +2 Query: 11 FFEGTHMXPYNIASYEIQPYKQRT------LTKGSTAAAPPSSSKQYHKHTAPLYYLTRY 172 + G+H+ P ++ P L+ T PPS+S + + T Sbjct: 703 YISGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAE 762 Query: 173 KANLAFTSENVRRKQEKPGTQN 238 K +L+F S+ V+ KQE PGT++ Sbjct: 763 KTSLSFKSDQVKVKQE-PGTED 783
>MRAY_LACLA (Q9CH70) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 329 Score = 30.0 bits (66), Expect = 6.1 Identities = 21/95 (22%), Positives = 42/95 (44%) Frame = -2 Query: 632 FREVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFTEP 453 F W F++Y + L + + + N + LT + L + + +IY + + Sbjct: 80 FITAWWVFAMYA-VIGFLDDFLKVFKQIN-EGLTAKQKM-LAQILIGIVSYFIYSHGEKS 136 Query: 452 HFVHWISWIAGIVQTMLYADFFYYYIISWKNNVKL 348 H +H +SW I + ++ F +++ W N V L Sbjct: 137 HIIHLLSWEFNI--GIFFSIFIIIWLVGWSNAVNL 169
>TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 409 Score = 29.6 bits (65), Expect = 8.0 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = -2 Query: 536 LTGQYVFFLGAYRVLY-ILNW-IYRYFTEPHFVHWISWIAGIVQTMLYADFFYYYIISWK 363 +TG + F V++ ILN IY YF P+FV I + G+V Y +ISW Sbjct: 107 VTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSLIHLVVGVV----------YCLISWS 156 Query: 362 NNVKLELP 339 + P Sbjct: 157 VGLPKRAP 164 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,773,296 Number of Sequences: 219361 Number of extensions: 2062245 Number of successful extensions: 4844 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4647 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4823 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)