ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20e23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108787.1| Zea mays PCO108073 mRNA sequence 133 8e-28
2gb|BT016286.1| Zea mays clone Contig119 mRNA sequence 129 1e-26
3dbj|AK120148.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 4e-20
4dbj|AK106476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 4e-20
5dbj|AK103724.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 4e-20
6ref|NM_193181.1| Oryza sativa (japonica cultivar-group), predic... 103 7e-19
7ref|XM_550301.1| Oryza sativa (japonica cultivar-group), mRNA 90 1e-14
8dbj|AK104777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
9dbj|AK060966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
11dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
12dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
13emb|X13577.1|TAAAM253 Wheat alpha-Amy2/53 gene 5'-region 70 1e-08
14gb|AY109940.1| Zea mays CL23230_1 mRNA sequence 56 1e-04
15gb|AC007208.13| Drosophila melanogaster clone BACR05D08, complet... 44 0.55
16gb|BT011186.1| Drosophila melanogaster RE12154 full insert cDNA 44 0.55
17gb|AC158633.7| Mus musculus 10 BAC RP23-407I4 (Roswell Park Canc... 44 0.55
18ref|NM_136263.1| Drosophila melanogaster CG8665-RA (CG8665), mRNA 44 0.55
19gb|AE003670.5| Drosophila melanogaster chromosome 2L, section 79... 44 0.55
20gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome 42 2.2
21gb|AC124535.4| Mus musculus BAC clone RP23-331C24 from chromosom... 42 2.2
22emb|AL390027.11| Human DNA sequence from clone RP11-368G3 on chr... 42 2.2
23emb|CR392032.9| Zebrafish DNA sequence from clone DKEYP-64A3 in ... 42 2.2
24emb|CR387805.1| Gallus gallus finished cDNA, clone ChEST84n15 42 2.2
25gb|AC139868.4| Mus musculus BAC clone RP23-366P1 from chromosome... 42 2.2
26emb|BX294109.5| Zebrafish DNA sequence from clone CH211-283P23 i... 42 2.2
27gb|AC132624.3| Mus musculus BAC clone RP23-77B21 from chromosome... 40 8.7
28gb|AC132092.3| Mus musculus BAC clone RP24-470A15 from chromosom... 40 8.7
29emb|AL929319.4| Zebrafish DNA sequence from clone CH211-59F17 in... 40 8.7
30emb|CR381531.7| Zebrafish DNA sequence from clone DKEY-190G6 in ... 40 8.7
31gb|AC115120.4| Mus musculus BAC clone RP23-116M23 from 16, compl... 40 8.7
32gb|AC151424.15| Medicago truncatula clone mth2-101c17, complete ... 40 8.7
33emb|AL359637.14| Human DNA sequence from clone RP11-484M8 on chr... 40 8.7
34emb|CR759918.11| Zebrafish DNA sequence from clone CH211-278M11 ... 40 8.7
35emb|AL732562.8| Zebrafish DNA sequence from clone CH211-103D22 i... 40 8.7
36gb|AC091181.8| Homo sapiens chromosome 17, clone RP11-426D19, co... 40 8.7
37gb|AC157645.8| Medicago truncatula clone mth2-70l21, complete se... 40 8.7
38gb|AC105108.4| Homo sapiens chromosome 8, clone CTD2-3179G6, com... 40 8.7
39gb|AC105107.5| Homo sapiens chromosome 8, clone CTD-3103L12, com... 40 8.7
40dbj|AK133056.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 8.7
41gb|AC011616.5|AC011616 Drosophila melanogaster, chromosome 3R, r... 40 8.7
42gb|AC011615.4|AC011615 Drosophila melanogaster, chromosome 3R, r... 40 8.7
43ref|XM_232981.1| PREDICTED: Rattus norvegicus similar to RIKEN c... 40 8.7
44gb|AC007406.1| Homo sapiens 12 BAC RPCI11-283I3 (Roswell Park Ca... 40 8.7
45gb|AC084341.17| Homo sapiens chromosome 8, clone RP11-760J15, co... 40 8.7
46gb|AE003713.3| Drosophila melanogaster chromosome 3R, section 51... 40 8.7
47dbj|AP005355.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.7
48emb|Z83221.2|CEC49A1 Caenorhabditis elegans Cosmid C49A1, comple... 40 8.7
49emb|AL773523.4| Mouse DNA sequence from clone RP23-186B18 on chr... 40 8.7
50emb|AL671900.5| Mouse DNA sequence from clone RP23-282O5 on chro... 40 8.7 
>gb|AY108787.1| Zea mays PCO108073 mRNA sequence
          Length = 1103

 Score =  133 bits (67), Expect = 8e-28
 Identities = 148/175 (84%)
 Strand = Plus / Minus

                                                                       
Query: 461 tccttaagttcacctttctggtgcatgcttaaaatgatgtcagatcccccaacaaactct 520
           ||||| |||||||| |||||||||||| | |  ||||| |||||||||||||| ||||||
Sbjct: 634 tccttcagttcacccttctggtgcatggtgagtatgatatcagatcccccaacgaactct 575

                                                                       
Query: 521 ccgttgataaatatttgcggaaaggtaggccaattactgtaagctttgacactctccttg 580
           || |||||||||||||| ||||| |||||||| |||||||| ||||| |||||||| |||
Sbjct: 574 cctttgataaatatttgtggaaacgtaggccagttactgtatgctttaacactctctttg 515

                                                                  
Query: 581 agcttcatattagtcagaatatctctactagtgatagagacgccatattgctgga 635
           ||||| | ||  |  ||||||||||||  | |||| | ||| |||||||||||||
Sbjct: 514 agctttagatctgaaagaatatctctagcactgatggggacaccatattgctgga 460
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>gb|BT016286.1| Zea mays clone Contig119 mRNA sequence
          Length = 1106

 Score =  129 bits (65), Expect = 1e-26
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                       
Query: 461 tccttaagttcacctttctggtgcatgcttaaaatgatgtcagatcccccaacaaactct 520
           ||||| |||||||| |||||||||||| | |  ||||| |||||||||||||| ||||||
Sbjct: 602 tccttcagttcacccttctggtgcatggtgagtatgatatcagatcccccaacgaactct 543

                                                                       
Query: 521 ccgttgataaatatttgcggaaaggtaggccaattactgtaagctttgacactctccttg 580
           || |||||||||||||| ||||| |||||||| |||||||| ||||| |||||||| |||
Sbjct: 542 cctttgataaatatttgtggaaacgtaggccagttactgtatgctttaacactctctttg 483

                
Query: 581 agctt 585
           |||||
Sbjct: 482 agctt 478
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>dbj|AK120148.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029J05, full
            insert sequence
          Length = 1936

 Score =  107 bits (54), Expect = 4e-20
 Identities = 117/138 (84%)
 Strand = Plus / Minus

                                                                        
Query: 448  atcaccaagtaactccttaagttcacctttctggtgcatgcttaaaatgatgtcagatcc 507
            ||||||||| |  |||||||| | ||| ||||| |||||   ||| ||||| ||||||||
Sbjct: 1511 atcaccaagcacatccttaagctgacccttctgatgcatatctaatatgatatcagatcc 1452

                                                                        
Query: 508  cccaacaaactctccgttgataaatatttgcggaaaggtaggccaattactgtaagcttt 567
            ||||||||||||||| |||||||||||||| ||||| |||||||| ||  |||  |||||
Sbjct: 1451 cccaacaaactctcctttgataaatatttgtggaaatgtaggccagttggtgtgggcttt 1392

                              
Query: 568  gacactctccttgagctt 585
            ||||||||| ||||||||
Sbjct: 1391 gacactctctttgagctt 1374
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>dbj|AK106476.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-C07, full
           insert sequence
          Length = 1510

 Score =  107 bits (54), Expect = 4e-20
 Identities = 117/138 (84%)
 Strand = Plus / Minus

                                                                       
Query: 448 atcaccaagtaactccttaagttcacctttctggtgcatgcttaaaatgatgtcagatcc 507
           ||||||||| |  |||||||| | ||| ||||| |||||   ||| ||||| ||||||||
Sbjct: 649 atcaccaagcacatccttaagctgacccttctgatgcatatctaatatgatatcagatcc 590

                                                                       
Query: 508 cccaacaaactctccgttgataaatatttgcggaaaggtaggccaattactgtaagcttt 567
           ||||||||||||||| |||||||||||||| ||||| |||||||| ||  |||  |||||
Sbjct: 589 cccaacaaactctcctttgataaatatttgtggaaatgtaggccagttggtgtgggcttt 530

                             
Query: 568 gacactctccttgagctt 585
           ||||||||| ||||||||
Sbjct: 529 gacactctctttgagctt 512
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>dbj|AK103724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138C10, full
           insert sequence
          Length = 1072

 Score =  107 bits (54), Expect = 4e-20
 Identities = 117/138 (84%)
 Strand = Plus / Minus

                                                                       
Query: 448 atcaccaagtaactccttaagttcacctttctggtgcatgcttaaaatgatgtcagatcc 507
           ||||||||| |  |||||||| | ||| ||||| |||||   ||| ||||| ||||||||
Sbjct: 604 atcaccaagcacatccttaagctgacccttctgatgcatatctaatatgatatcagatcc 545

                                                                       
Query: 508 cccaacaaactctccgttgataaatatttgcggaaaggtaggccaattactgtaagcttt 567
           ||||||||||||||| |||||||||||||| ||||| |||||||| ||  |||  |||||
Sbjct: 544 cccaacaaactctcctttgataaatatttgtggaaatgtaggccagttggtgtgggcttt 485

                             
Query: 568 gacactctccttgagctt 585
           ||||||||| ||||||||
Sbjct: 484 gacactctctttgagctt 467
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>ref|NM_193181.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 615

 Score =  103 bits (52), Expect = 7e-19
 Identities = 82/92 (89%)
 Strand = Plus / Minus

                                                                       
Query: 494 atgatgtcagatcccccaacaaactctccgttgataaatatttgcggaaaggtaggccaa 553
           ||||| ||||||||||||||||||||||| |||||||||||||| ||||| |||||||| 
Sbjct: 581 atgatatcagatcccccaacaaactctcctttgataaatatttgtggaaatgtaggccag 522

                                           
Query: 554 ttactgtaagctttgacactctccttgagctt 585
           ||  |||  |||||||||||||| ||||||||
Sbjct: 521 ttggtgtgggctttgacactctctttgagctt 490
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>ref|XM_550301.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 895

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 105/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 461 tccttaagttcacctttctggtgcatgcttaaaatgatgtcagatcccccaacaaactct 520
           |||||||| | ||| ||||| |||||   ||| ||||| ||||| |||||||||||||||
Sbjct: 631 tccttaagctgacccttctgatgcatatctaatatgatatcagaccccccaacaaactct 572

                                                                       
Query: 521 ccgttgataaatatttgcggaaaggtaggccaattactgtaagctttgacactctccttg 580
           || |||||||||||||| ||||| |||||||| ||  |||  |||||||||| ||| |||
Sbjct: 571 cctttgataaatatttgtggaaacgtaggccagttggtgtgggctttgacacactctttg 512

                
Query: 581 agctt 585
           |||||
Sbjct: 511 agctt 507
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>dbj|AK104777.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C02, full
           insert sequence
          Length = 895

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 105/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 461 tccttaagttcacctttctggtgcatgcttaaaatgatgtcagatcccccaacaaactct 520
           |||||||| | ||| ||||| |||||   ||| ||||| ||||| |||||||||||||||
Sbjct: 631 tccttaagctgacccttctgatgcatatctaatatgatatcagaccccccaacaaactct 572

                                                                       
Query: 521 ccgttgataaatatttgcggaaaggtaggccaattactgtaagctttgacactctccttg 580
           || |||||||||||||| ||||| |||||||| ||  |||  |||||||||| ||| |||
Sbjct: 571 cctttgataaatatttgtggaaacgtaggccagttggtgtgggctttgacacactctttg 512

                
Query: 581 agctt 585
           |||||
Sbjct: 511 agctt 507
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>dbj|AK060966.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C01, full
           insert sequence
          Length = 895

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 105/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 461 tccttaagttcacctttctggtgcatgcttaaaatgatgtcagatcccccaacaaactct 520
           |||||||| | ||| ||||| |||||   ||| ||||| ||||| |||||||||||||||
Sbjct: 631 tccttaagctgacccttctgatgcatatctaatatgatatcagaccccccaacaaactct 572

                                                                       
Query: 521 ccgttgataaatatttgcggaaaggtaggccaattactgtaagctttgacactctccttg 580
           || |||||||||||||| ||||| |||||||| ||  |||  |||||||||| ||| |||
Sbjct: 571 cctttgataaatatttgtggaaacgtaggccagttggtgtgggctttgacacactctttg 512

                
Query: 581 agctt 585
           |||||
Sbjct: 511 agctt 507
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                           
Query: 494      atgatgtcagatcccccaacaaactctccgttgataaatatttgcggaaaggtaggcca 552
                ||||| ||||||||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 19088377 atgatatcagatcccccaacaaactctcctttgataaatatttgtggaaatgtaggcca 19088319



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                          
Query: 494     atgatgtcagatcccccaacaaactctccgttgataaatatttgcggaaaggtaggcca 552
               ||||| ||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 3844036 atgatatcagaccccccaacaaactctcctttgataaatatttgtggaaacgtaggcca 3843978
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>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0702H08
          Length = 166899

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                        
Query: 494   atgatgtcagatcccccaacaaactctccgttgataaatatttgcggaaaggtaggcca 552
             ||||| ||||||||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 53794 atgatatcagatcccccaacaaactctcctttgataaatatttgtggaaatgtaggcca 53736
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>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0089K24
          Length = 154137

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                         
Query: 494    atgatgtcagatcccccaacaaactctccgttgataaatatttgcggaaaggtaggcca 552
              ||||| ||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 117578 atgatatcagaccccccaacaaactctcctttgataaatatttgtggaaacgtaggcca 117520
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>emb|X13577.1|TAAAM253 Wheat alpha-Amy2/53 gene 5'-region
          Length = 919

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 60/67 (89%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                       
Query: 26  tgaagaaactgtca-cccctcacaactaaaaatgccagtgaaatcgttcgcaaatgccac 84
           |||| ||||||||| |||||||||||| ||||||||| ||||||||||||||| || || 
Sbjct: 252 tgaaaaaactgtcatcccctcacaacttaaaatgccaatgaaatcgttcgcaagtgtcat 311

                  
Query: 85  cccctcc 91
           |||||||
Sbjct: 312 cccctcc 318
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>gb|AY109940.1| Zea mays CL23230_1 mRNA sequence
          Length = 868

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 461 tccttaagttcacctttctggtgcatgcttaaaatgatgt 500
           |||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 351 tccttaagctcacccttctggtgcatgcttaatatgatgt 390
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>gb|AC007208.13| Drosophila melanogaster clone BACR05D08, complete sequence
          Length = 172190

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 510   caacaaactctccgttgataaa 531
             ||||||||||||||||||||||
Sbjct: 62058 caacaaactctccgttgataaa 62037
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>gb|BT011186.1| Drosophila melanogaster RE12154 full insert cDNA
          Length = 3636

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 510  caacaaactctccgttgataaa 531
            ||||||||||||||||||||||
Sbjct: 1446 caacaaactctccgttgataaa 1425
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>gb|AC158633.7| Mus musculus 10 BAC RP23-407I4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 206282

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 211   tattgaaaaagtggcatttatt 232
             ||||||||||||||||||||||
Sbjct: 59946 tattgaaaaagtggcatttatt 59967
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>ref|NM_136263.1| Drosophila melanogaster CG8665-RA (CG8665), mRNA
          Length = 3619

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 510  caacaaactctccgttgataaa 531
            ||||||||||||||||||||||
Sbjct: 1446 caacaaactctccgttgataaa 1425
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>gb|AE003670.5| Drosophila melanogaster chromosome 2L, section 79 of 83 of the complete
             sequence
          Length = 258711

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 510   caacaaactctccgttgataaa 531
             ||||||||||||||||||||||
Sbjct: 91133 caacaaactctccgttgataaa 91112
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>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 188    tattacaatgtaaaaagaaacaatattga 216
              |||||||||||||| ||| ||||||||||
Sbjct: 935843 tattacaatgtaaagagatacaatattga 935815
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>gb|AC124535.4| Mus musculus BAC clone RP23-331C24 from chromosome 18, complete sequence
          Length = 206191

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 481    gtgcatgcttaaaatgatgtc 501
              |||||||||||||||||||||
Sbjct: 194590 gtgcatgcttaaaatgatgtc 194570
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>emb|AL390027.11| Human DNA sequence from clone RP11-368G3 on chromosome X Contains an
             UDP-GlcNAc:betaGal
             beta-1,3-N-acetylglucosaminyltransferase 1 (B3GNT1)
             pseudogene, complete sequence
          Length = 200191

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 347   agtaaaagagtactcagagag 367
             |||||||||||||||||||||
Sbjct: 12566 agtaaaagagtactcagagag 12546
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>emb|CR392032.9| Zebrafish DNA sequence from clone DKEYP-64A3 in linkage group 2, complete
              sequence
          Length = 191649

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 200    aaaagaaacaatattgaaaaa 220
              |||||||||||||||||||||
Sbjct: 117987 aaaagaaacaatattgaaaaa 118007
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>emb|CR387805.1| Gallus gallus finished cDNA, clone ChEST84n15
          Length = 1752

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 169  gcaaaaaagagcacctgacta 189
            |||||||||||||||||||||
Sbjct: 1623 gcaaaaaagagcacctgacta 1603
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>gb|AC139868.4| Mus musculus BAC clone RP23-366P1 from chromosome 18, complete sequence
          Length = 154607

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 481    gtgcatgcttaaaatgatgtc 501
              |||||||||||||||||||||
Sbjct: 114219 gtgcatgcttaaaatgatgtc 114239
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>emb|BX294109.5| Zebrafish DNA sequence from clone CH211-283P23 in linkage group 2,
             complete sequence
          Length = 72487

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 200   aaaagaaacaatattgaaaaa 220
             |||||||||||||||||||||
Sbjct: 18170 aaaagaaacaatattgaaaaa 18150
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>gb|AC132624.3| Mus musculus BAC clone RP23-77B21 from chromosome 18, complete sequence
          Length = 161099

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    atccatctccatgcaaatgc 392
              ||||||||||||||||||||
Sbjct: 104856 atccatctccatgcaaatgc 104875
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>gb|AC132092.3| Mus musculus BAC clone RP24-470A15 from chromosome 16, complete
             sequence
          Length = 174558

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 326   acaccacaggaagagcatcagagt 349
             ||||||||||||||||| ||||||
Sbjct: 15484 acaccacaggaagagcaacagagt 15461
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>emb|AL929319.4| Zebrafish DNA sequence from clone CH211-59F17 in linkage group 10,
           complete sequence
          Length = 194614

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 taacagcctaatcatttatt 137
           ||||||||||||||||||||
Sbjct: 664 taacagcctaatcatttatt 683



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 taacagcctaatcatttatt 137
           ||||||||||||||||||||
Sbjct: 636 taacagcctaatcatttatt 655
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>emb|CR381531.7| Zebrafish DNA sequence from clone DKEY-190G6 in linkage group 23,
             complete sequence
          Length = 149672

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 188   tattacaatgtaaaaagaaacaatattgaaaa 219
             ||||| ||||||| || |||||||||||||||
Sbjct: 38286 tattataatgtaacaaaaaacaatattgaaaa 38255
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>gb|AC115120.4| Mus musculus BAC clone RP23-116M23 from 16, complete sequence
          Length = 222066

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 326   acaccacaggaagagcatcagagt 349
             ||||||||||||||||| ||||||
Sbjct: 18388 acaccacaggaagagcaacagagt 18411
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>gb|AC151424.15| Medicago truncatula clone mth2-101c17, complete sequence
          Length = 137117

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 374   tccatctccatgcaaatgctaaca 397
             ||||||||| ||||||||||||||
Sbjct: 41006 tccatctccttgcaaatgctaaca 40983
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>emb|AL359637.14| Human DNA sequence from clone RP11-484M8 on chromosome 13, complete
              sequence
          Length = 174135

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    tgaaaaagtggcatttattt 233
              ||||||||||||||||||||
Sbjct: 131228 tgaaaaagtggcatttattt 131247
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>emb|CR759918.11| Zebrafish DNA sequence from clone CH211-278M11 in linkage group 15,
              complete sequence
          Length = 160374

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 209    aatattgaaaaagtggcatttatt 232
              ||||||||||||||| ||||||||
Sbjct: 121012 aatattgaaaaagtgacatttatt 121035
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>emb|AL732562.8| Zebrafish DNA sequence from clone CH211-103D22 in linkage group 10
             Contains the 3' part of the cxadr gene (coxsackie virus
             and adenovirus receptor), a novel gene similar to AUTS2
             (autism-related protein 1) and four CpG islands, complete
             sequence
          Length = 187365

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   taacagcctaatcatttatt 137
             ||||||||||||||||||||
Sbjct: 39623 taacagcctaatcatttatt 39642



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   taacagcctaatcatttatt 137
             ||||||||||||||||||||
Sbjct: 39595 taacagcctaatcatttatt 39614
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>gb|AC091181.8| Homo sapiens chromosome 17, clone RP11-426D19, complete sequence
          Length = 155923

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    aaaaagaaacaatattgaaa 218
              ||||||||||||||||||||
Sbjct: 128135 aaaaagaaacaatattgaaa 128116
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>gb|AC157645.8| Medicago truncatula clone mth2-70l21, complete sequence
          Length = 118562

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 374    tccatctccatgcaaatgctaaca 397
              ||||||||| ||||||||||||||
Sbjct: 114654 tccatctccttgcaaatgctaaca 114631
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>gb|AC105108.4| Homo sapiens chromosome 8, clone CTD2-3179G6, complete sequence
          Length = 141073

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 59    ccagtgaaatcgttcgcaaatgccaccc 86
             ||||||||||||||| ||| ||||||||
Sbjct: 52623 ccagtgaaatcgttcacaagtgccaccc 52596
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>gb|AC105107.5| Homo sapiens chromosome 8, clone CTD-3103L12, complete sequence
          Length = 135376

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 59    ccagtgaaatcgttcgcaaatgccaccc 86
             ||||||||||||||| ||| ||||||||
Sbjct: 28287 ccagtgaaatcgttcacaagtgccaccc 28314
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>dbj|AK133056.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930564G10 product:unclassifiable, full
           insert sequence
          Length = 1092

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 ccacaggaagagcatcagag 348
           ||||||||||||||||||||
Sbjct: 334 ccacaggaagagcatcagag 353
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>gb|AC011616.5|AC011616 Drosophila melanogaster, chromosome 3R, region 89D-89E, BAC clone
            BACR48L13, complete sequence
          Length = 168666

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 52   aaaaatgccagtgaaatcgt 71
            ||||||||||||||||||||
Sbjct: 2491 aaaaatgccagtgaaatcgt 2472
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>gb|AC011615.4|AC011615 Drosophila melanogaster, chromosome 3R, region 89D-89D, BAC clone
              BACR01H23, complete sequence
          Length = 199653

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     aaaaatgccagtgaaatcgt 71
              ||||||||||||||||||||
Sbjct: 179395 aaaaatgccagtgaaatcgt 179376
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>ref|XM_232981.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2310039E09
           (predicted) (LOC313225), mRNA
          Length = 1089

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 64  gaaatcgttcgcaaatgccaccccctcc 91
           ||||||| || |||||||||||||||||
Sbjct: 765 gaaatcgatctcaaatgccaccccctcc 792
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>gb|AC007406.1| Homo sapiens 12 BAC RPCI11-283I3 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 177402

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   aaacaatattgaaaaagtgg 224
             ||||||||||||||||||||
Sbjct: 90398 aaacaatattgaaaaagtgg 90379
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>gb|AC084341.17| Homo sapiens chromosome 8, clone RP11-760J15, complete sequence
          Length = 141058

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    aagacaacagaacaccacag 334
              ||||||||||||||||||||
Sbjct: 113985 aagacaacagaacaccacag 113966
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>gb|AE003713.3| Drosophila melanogaster chromosome 3R, section 51 of 118 of the complete
              sequence
          Length = 226561

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     aaaaatgccagtgaaatcgt 71
              ||||||||||||||||||||
Sbjct: 177563 aaaaatgccagtgaaatcgt 177544
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>dbj|AP005355.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1189A8, complete
            sequence
          Length = 151101

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 315  aagacaacagaacaccacag 334
            ||||||||||||||||||||
Sbjct: 6523 aagacaacagaacaccacag 6504
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>emb|Z83221.2|CEC49A1 Caenorhabditis elegans Cosmid C49A1, complete sequence
          Length = 40226

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    aactaaaaatgccagtgaaa 67
             ||||||||||||||||||||
Sbjct: 33160 aactaaaaatgccagtgaaa 33141
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>emb|AL773523.4| Mouse DNA sequence from clone RP23-186B18 on chromosome 2, complete
             sequence
          Length = 198403

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   ccacaggaagagcatcagag 348
             ||||||||||||||||||||
Sbjct: 70004 ccacaggaagagcatcagag 70023
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>emb|AL671900.5| Mouse DNA sequence from clone RP23-282O5 on chromosome X, complete
             sequence
          Length = 185389

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   tgactattacaatgtaaaaa 203
             ||||||||||||||||||||
Sbjct: 27382 tgactattacaatgtaaaaa 27401


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,204,902
Number of Sequences: 3902068
Number of extensions: 6204902
Number of successful extensions: 123989
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123777
Number of HSP's gapped (non-prelim): 211
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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