| Clone Name | rbags20d18 |
|---|---|
| Clone Library Name | barley_pub |
>HIS8_LISIN (Q92A83) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 360 Score = 33.1 bits (74), Expect = 0.71 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +2 Query: 317 GELTSLRKNISDFYKVSELRVLCLVDCHNLLSLMARVSLD 436 G +SLRK ++DFY++ E ++ L+ L+ RV LD Sbjct: 64 GWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLD 103
>HIS8_LISMO (Q8Y5X8) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 360 Score = 31.2 bits (69), Expect = 2.7 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +2 Query: 317 GELTSLRKNISDFYKVSELRVLCLVDCHNLLSLMARVSLD 436 G +SLRK +++FY++ E ++ L+ L+ RV LD Sbjct: 64 GWASSLRKEVTNFYQLEEEELIFTAGVDELIELLTRVLLD 103
>PDE3A_RAT (Q62865) cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC| 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A) (CGI-PDE A) Length = 1141 Score = 30.8 bits (68), Expect = 3.5 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Frame = +3 Query: 105 SKWTTC*ANDGVTVLKP-PNRMQPATKHAVHHHSADKQKLVLPRNMKLPVRGPIYKTEAQ 281 S WTT + G+ L+P P R + ++ H A V P + PV + K+ + Sbjct: 436 STWTTTTSATGLPTLEPAPVRRDRSA--SIKPHEAPSPSAVNPDSWNAPVLMTLTKSRSF 493 Query: 282 THYYSTSSARH 314 T Y+ S+A H Sbjct: 494 TSSYAVSAANH 504
>AUTS2_HUMAN (Q8WXX7) Autism susceptibility gene 2 protein| Length = 1259 Score = 30.8 bits (68), Expect = 3.5 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +3 Query: 156 PNRMQPATKHAVHHHSADKQKLVLPRNMKLPVRGPIYKTEAQTHY 290 P + QPA H HH SA L LP + L P + A +H+ Sbjct: 412 PAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHH 456
>HIS8_LISMF (Q71Y90) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 360 Score = 29.6 bits (65), Expect = 7.9 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +2 Query: 317 GELTSLRKNISDFYKVSELRVLCLVDCHNLLSLMARVSLD 436 G +SLR ++DFY++ E ++ L+ L+ RV LD Sbjct: 64 GWASSLRTVVADFYQLEEEELIFTAGVDELIELLTRVLLD 103
>VGLG_ORSVW (Q86695) Major surface glycoprotein G (Attachment glycoprotein G)| Length = 263 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = +3 Query: 150 KPPNRMQPATKHAVHHHSADKQKLVLPRNMKLPVRGPIYKTEAQTHYYSTSSARH 314 KP +P TK + HH ++ + KL + NM P G I + + + + RH Sbjct: 207 KPMTTKKP-TKTSTHHRTSLRNKLYIKTNMTTPPHGLISTAKHNKNQSTVQNPRH 260 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,655,214 Number of Sequences: 219361 Number of extensions: 1557004 Number of successful extensions: 4364 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4238 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4364 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)