ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags20d14 |
|---|---|
| Clone Library Name | barley_pub |
>FPPS_MAIZE (P49353) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 350 Score = 258 bits (659), Expect = 1e-68 Identities = 125/135 (92%), Positives = 130/135 (96%) Frame = -3 Query: 692 GENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERA 513 GENL+NYG VENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERA Sbjct: 216 GENLDNYGDVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERA 275 Query: 512 DESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQ 333 DESQK ILFENYGKKDPACVAKVK+LYKEL+LE +F EYE+ESYKKLI DIEAQPSIAVQ Sbjct: 276 DESQKRILFENYGKKDPACVAKVKNLYKELDLEAVFQEYENESYKKLIADIEAQPSIAVQ 335 Query: 332 KVLKSFLHKIYKRQK 288 KVLKSFLHKIYKRQK Sbjct: 336 KVLKSFLHKIYKRQK 350
>FPPS1_PARAR (O24241) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)| (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 206 bits (524), Expect = 6e-53 Identities = 100/135 (74%), Positives = 115/135 (85%) Frame = -3 Query: 692 GENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERA 513 GE+LE + V+N+LVEMGTYFQVQDDYLDC+G PE IGKIGTDIED+KCSWLVV+ALE + Sbjct: 208 GEDLEKHEEVKNVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKALELS 267 Query: 512 DESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQ 333 +E QK IL ENYGKKDP+ VAKVK+LY LNL+G+F +YE+ SYKKLIT IE PS AVQ Sbjct: 268 NEEQKKILHENYGKKDPSSVAKVKELYHTLNLQGVFEDYENTSYKKLITSIEGHPSKAVQ 327 Query: 332 KVLKSFLHKIYKRQK 288 VLKSFL KIYKRQK Sbjct: 328 AVLKSFLGKIYKRQK 342
>FPPS1_LUPAL (P49351) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)| (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 205 bits (522), Expect = 1e-52 Identities = 99/135 (73%), Positives = 118/135 (87%) Frame = -3 Query: 692 GENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERA 513 GENL+N+ V+NILV+MGTYFQVQDDYLDC+G PE IGKIGTDIED+KCSWLVV+ALE + Sbjct: 208 GENLDNHIDVKNILVDMGTYFQVQDDYLDCFGAPETIGKIGTDIEDFKCSWLVVKALELS 267 Query: 512 DESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQ 333 ++ QK +L++NYGK DPA VAKVK LY ELNL+G+F EYES+SY+KL+T IEA PS AVQ Sbjct: 268 NDEQKKVLYDNYGKPDPANVAKVKALYDELNLQGVFTEYESKSYEKLVTSIEAHPSKAVQ 327 Query: 332 KVLKSFLHKIYKRQK 288 +LKSFL KIYKRQK Sbjct: 328 ALLKSFLGKIYKRQK 342
>FPPS2_PARAR (O24242) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 205 bits (521), Expect = 1e-52 Identities = 99/135 (73%), Positives = 115/135 (85%) Frame = -3 Query: 692 GENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERA 513 GE+LE + V+N+LVEMGTYFQVQDDYLDC+G PE IGKIGTDIED+KCSWLVV+ALE A Sbjct: 208 GEDLEKHVEVKNVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKALELA 267 Query: 512 DESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQ 333 +E QK +L ENYGKKDP+ VAKVK+LY LNL+G+F +YE+ SYKKLIT IE PS AVQ Sbjct: 268 NEEQKKVLHENYGKKDPSPVAKVKELYNTLNLQGVFEDYENTSYKKLITSIEGHPSKAVQ 327 Query: 332 KVLKSFLHKIYKRQK 288 VLKSFL KIY+RQK Sbjct: 328 AVLKSFLGKIYRRQK 342
>FPPS2_LUPAL (P49352) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 204 bits (519), Expect = 2e-52 Identities = 100/135 (74%), Positives = 115/135 (85%) Frame = -3 Query: 692 GENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERA 513 GENL+N+ V+NILVEMGTYFQVQDDYLDC+G PE IGKIGTDIED+KCSWLVV+ALE + Sbjct: 208 GENLDNHTDVKNILVEMGTYFQVQDDYLDCFGAPETIGKIGTDIEDFKCSWLVVKALELS 267 Query: 512 DESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQ 333 +E QK +L+ENYGK DPA VAKVK LY ELNLEG + +YES+SY+KL+T IE PS AVQ Sbjct: 268 NEEQKKVLYENYGKPDPANVAKVKTLYNELNLEGAYADYESKSYEKLVTCIEGHPSKAVQ 327 Query: 332 KVLKSFLHKIYKRQK 288 VLKSF KIYKRQK Sbjct: 328 GVLKSFWAKIYKRQK 342
>FPPS1_ARATH (Q09152) Farnesyl pyrophosphate synthetase 1, mitochondrial| precursor (FPP synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 384 Score = 201 bits (510), Expect = 2e-51 Identities = 98/135 (72%), Positives = 113/135 (83%) Frame = -3 Query: 692 GENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERA 513 GENLEN+ V+N+LV+MG YFQVQDDYLDC+ DPE +GKIGTDIED+KCSWLVV+ALER Sbjct: 250 GENLENHIDVKNVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERC 309 Query: 512 DESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQ 333 E Q IL+ENYGK DP+ VAKVKDLYKEL+LEG+F EYES+SY+KL IE S A+Q Sbjct: 310 SEEQTKILYENYGKPDPSNVAKVKDLYKELDLEGVFMEYESKSYEKLTGAIEGHQSKAIQ 369 Query: 332 KVLKSFLHKIYKRQK 288 VLKSFL KIYKRQK Sbjct: 370 AVLKSFLAKIYKRQK 384
>FPPS_HELAN (O64905) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 341 Score = 199 bits (506), Expect = 7e-51 Identities = 99/135 (73%), Positives = 114/135 (84%) Frame = -3 Query: 692 GENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERA 513 GE+L+N+ V+N+LVEMGTYFQVQDDYLDC+G PE IGKIGTDIED+ SWLVV+ALE A Sbjct: 208 GEDLDNHVEVKNVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFS-SWLVVKALELA 266 Query: 512 DESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQ 333 +E QK +L ENYGKKDP+ VAKVK+LY LNL+G+F +YES SYKKLIT IE PS AVQ Sbjct: 267 NEEQKKVLHENYGKKDPSSVAKVKELYNTLNLQGVFEDYESTSYKKLITSIEGHPSKAVQ 326 Query: 332 KVLKSFLHKIYKRQK 288 VLKSFL KIYKRQK Sbjct: 327 AVLKSFLGKIYKRQK 341
>FPPS_ARTAN (P49350) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 343 Score = 199 bits (505), Expect = 9e-51 Identities = 97/135 (71%), Positives = 112/135 (82%) Frame = -3 Query: 692 GENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERA 513 GE+L+ + V+N+LVEMGTYFQVQDDYLDC+G PE IGKIGTDIED+KCSWLVV+ALE Sbjct: 209 GEDLDKHVEVKNVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKALELP 268 Query: 512 DESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQ 333 +E QK L ENYGKKDPA VAKVK++Y LNL+ +F +YE+ SYKKLIT IE PS AVQ Sbjct: 269 NEEQKKTLHENYGKKDPASVAKVKEVYHTLNLQAVFEDYEATSYKKLITSIENHPSKAVQ 328 Query: 332 KVLKSFLHKIYKRQK 288 VLKSFL KIYKRQK Sbjct: 329 AVLKSFLGKIYKRQK 343
>FPPS2_ARATH (Q43315) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 195 bits (495), Expect = 1e-49 Identities = 96/135 (71%), Positives = 110/135 (81%) Frame = -3 Query: 692 GENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERA 513 GENLEN+ V+ +LV+MG YFQVQDDYLDC+ DPE +GKIGTDIED+KCSWLVV+ALER Sbjct: 208 GENLENHTDVKTVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERC 267 Query: 512 DESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQ 333 E Q IL+ENYGK +P+ VAKVK LYKEL+LEG F EYE ESY+KL IEA S A+Q Sbjct: 268 SEEQTKILYENYGKAEPSNVAKVKALYKELDLEGAFMEYEKESYEKLTKLIEAHQSKAIQ 327 Query: 332 KVLKSFLHKIYKRQK 288 VLKSFL KIYKRQK Sbjct: 328 AVLKSFLAKIYKRQK 342
>FPPS_CHICK (P08836) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 367 Score = 142 bits (358), Expect = 1e-33 Identities = 65/134 (48%), Positives = 91/134 (67%) Frame = -3 Query: 689 ENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERAD 510 ++ E + + IL+EMG YFQ+QDDYLDC+GDP GK+GTDI+D KCSWLVVQ L+R Sbjct: 234 DSKEEHENAKAILLEMGEYFQIQDDYLDCFGDPALTGKVGTDIQDNKCSWLVVQCLQRVT 293 Query: 509 ESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQK 330 Q+ +L +NYG+K+P VAKVK+LY+ + + F +YE SY++L IE + ++ Sbjct: 294 PEQRQLLEDNYGRKEPEKVAKVKELYEAVGMRAAFQQYEESSYRRLQELIEKHSNRLPKE 353 Query: 329 VLKSFLHKIYKRQK 288 + KIYKRQK Sbjct: 354 IFLGLAQKIYKRQK 367
>FPPS_RAT (P05369) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) (Cholesterol-regulated 39 kDa protein) (CR 39) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 137 bits (346), Expect = 3e-32 Identities = 67/123 (54%), Positives = 87/123 (70%) Frame = -3 Query: 656 ILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENY 477 IL+EMG +FQ+QDDYLD +GDP GK+GTDI+D KCSWLVVQ L RA Q+ IL ENY Sbjct: 231 ILLEMGEFFQIQDDYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLLRATPQQRQILEENY 290 Query: 476 GKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQKVLKSFLHKIYK 297 G+KDP VA+VK LY+EL+L +F +YE +SY +L + IE + + +KIYK Sbjct: 291 GQKDPEKVARVKALYEELDLRSVFFKYEEDSYNRLKSLIEQCSAPLPPSIFLELANKIYK 350 Query: 296 RQK 288 R+K Sbjct: 351 RRK 353
>FPPS_MOUSE (Q920E5) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) (Cholesterol-regulated 39 kDa protein) (CR 39) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 136 bits (343), Expect = 6e-32 Identities = 67/123 (54%), Positives = 86/123 (69%) Frame = -3 Query: 656 ILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENY 477 IL+EMG +FQVQDDYLD +GDP GK+GTDI+D KCSWLVVQ L RA Q+ IL ENY Sbjct: 231 ILMEMGEFFQVQDDYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLLRASPQQRQILEENY 290 Query: 476 GKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQKVLKSFLHKIYK 297 G+KDP VA+VK LY+ L+L+ F +YE +SY +L + IE + + +KIYK Sbjct: 291 GQKDPEKVARVKALYEALDLQSAFFKYEEDSYNRLKSLIEQCSAPLPPSIFMELANKIYK 350 Query: 296 RQK 288 R+K Sbjct: 351 RRK 353
>FPPS_HUMAN (P14324) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 133 bits (335), Expect = 5e-31 Identities = 66/131 (50%), Positives = 87/131 (66%) Frame = -3 Query: 680 ENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQ 501 + + + IL+EMG +FQ+QDDYLD +GDP GKIGTDI+D KCSWLVVQ L+RA Q Sbjct: 223 KEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQ 282 Query: 500 KSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQKVLK 321 IL ENYG+K+ VA+VK LY+EL+L +F +YE +SY ++ IE + V Sbjct: 283 YQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFL 342 Query: 320 SFLHKIYKRQK 288 KIYKR+K Sbjct: 343 GLARKIYKRRK 353
>FPPS_YEAST (P08524) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 352 Score = 130 bits (326), Expect = 5e-30 Identities = 63/127 (49%), Positives = 85/127 (66%), Gaps = 3/127 (2%) Frame = -3 Query: 659 NILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFEN 480 ++L+ +G YFQ+QDDYLDC+G PE IGKIGTDI+D KCSW++ +ALE A Q+ L EN Sbjct: 227 DVLIPLGEYFQIQDDYLDCFGTPEQIGKIGTDIQDNKCSWVINKALELASAEQRKTLDEN 286 Query: 479 YGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKL---ITDIEAQPSIAVQKVLKSFLH 309 YGKKD AK K ++ +L +E L+HEYE K L I+ ++ VL +FL+ Sbjct: 287 YGKKDSVAEAKCKKIFNDLKIEQLYHEYEESIAKDLKAKISQVDESRGFKAD-VLTAFLN 345 Query: 308 KIYKRQK 288 K+YKR K Sbjct: 346 KVYKRSK 352
>FPPS_SCHPO (O14230) Probable farnesyl pyrophosphate synthetase (FPP| synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 125 bits (313), Expect = 2e-28 Identities = 63/134 (47%), Positives = 84/134 (62%), Gaps = 3/134 (2%) Frame = -3 Query: 680 ENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQ 501 EN ++IL+ +G YFQVQDDYLDCYGDP GKIGTDI D KCSW++ AL + Q Sbjct: 215 ENLKCAQDILIILGKYFQVQDDYLDCYGDPTVTGKIGTDILDNKCSWIINLALAKCTPEQ 274 Query: 500 KSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYES---ESYKKLITDIEAQPSIAVQK 330 + IL +NYG+KD +VK +++ELN+ G F YE KKLI ++ + + Sbjct: 275 RVILDDNYGRKDSESEKRVKAVFEELNIRGEFENYEESEVSEIKKLIDGVDESTGLK-KS 333 Query: 329 VLKSFLHKIYKRQK 288 + +FL KIYKR K Sbjct: 334 IFTTFLGKIYKRNK 347
>FPPS_NEUCR (Q92250) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 125 bits (313), Expect = 2e-28 Identities = 68/134 (50%), Positives = 86/134 (64%), Gaps = 3/134 (2%) Frame = -3 Query: 680 ENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQ 501 EN E+IL+ +G YFQVQDDYLD +G PE IGKIGTDI+D KCSWLV +AL Q Sbjct: 215 ENLKQAEDILIPLGEYFQVQDDYLDNFGLPEHIGKIGTDIQDNKCSWLVNKALSIVTPEQ 274 Query: 500 KSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESE---SYKKLITDIEAQPSIAVQK 330 + L ENYG+KD A A +K LY +L LE + +YE E +K+I I+ + Q Sbjct: 275 RKTLEENYGRKDKAKEAVIKQLYDDLKLEDHYKQYEEERVGEIRKMIDAIDESKGLKKQ- 333 Query: 329 VLKSFLHKIYKRQK 288 V ++FL KIYKR K Sbjct: 334 VFEAFLGKIYKRSK 347
>FPPS_KLULA (P49349) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 349 Score = 122 bits (307), Expect = 8e-28 Identities = 59/127 (46%), Positives = 87/127 (68%), Gaps = 3/127 (2%) Frame = -3 Query: 659 NILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFEN 480 ++L+ +G YFQ+QDD+LDC+G PE IGKIGTDI+D KCSW++ AL+ A + Q+ IL EN Sbjct: 224 DVLIPLGEYFQIQDDFLDCFGKPEDIGKIGTDIQDNKCSWVINVALKNATKEQRDILDEN 283 Query: 479 YGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKL---ITDIEAQPSIAVQKVLKSFLH 309 YG+KD K + ++ ELN++ ++H+YE E+ L I +I+ + VL FL+ Sbjct: 284 YGRKDSEKEQKCRAVFNELNIQDIYHKYEEETASNLREKIANIDESRGFKAE-VLTLFLN 342 Query: 308 KIYKRQK 288 KIY R+K Sbjct: 343 KIYHRKK 349
>FPPS_GIBFU (Q92235) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 121 bits (304), Expect = 2e-27 Identities = 66/133 (49%), Positives = 86/133 (64%), Gaps = 3/133 (2%) Frame = -3 Query: 677 NYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQK 498 N E+IL+ +G YFQ+QDDYLD +G PE IGKIGTDI+D KCSWLV QAL A Q+ Sbjct: 216 NLKQAEDILIPLGEYFQIQDDYLDNFGKPEHIGKIGTDIKDNKCSWLVNQALAVATPEQR 275 Query: 497 SILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESE---SYKKLITDIEAQPSIAVQKV 327 IL ENYG+KD VK LY +LNLE + +YE + ++ I +I+ + + V Sbjct: 276 KILEENYGRKDDEKEKVVKKLYDDLNLEQRYLDYEEKVVGQIRERIANIDENDGLK-KTV 334 Query: 326 LKSFLHKIYKRQK 288 ++FL KIYKR K Sbjct: 335 FEAFLAKIYKRSK 347
>IDSA_METTM (Q53479) Bifunctional short chain isoprenyl diphosphate synthase| [Includes: Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP synthetase) (Dimethylallyltranstransferase); Geranyltranstransferase (EC 2.5.1.10)] Length = 324 Score = 58.9 bits (141), Expect = 1e-08 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Frame = -3 Query: 689 ENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERA 513 E LE+YG +G FQ+ DDYLD D E +GK +G+DI + K + +VV+ALE A Sbjct: 196 EALEDYGKF------IGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKALEEA 249 Query: 512 DESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHE 399 E + L G D VA+ ++++ HE Sbjct: 250 SEEDRERLISILGSGDEGSVAEAIEIFERYGATQYAHE 287
>IDSA_METTH (O26156) Bifunctional short chain isoprenyl diphosphate synthase| [Includes: Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP synthetase) (Dimethylallyltranstransferase); Geranyltranstransferase (EC 2.5.1.10)] Length = 325 Score = 57.4 bits (137), Expect = 4e-08 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Frame = -3 Query: 683 LENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADE 507 LE+YG +G FQ+ DDYLD D E +GK +G+DI + K + +VV+ALERA E Sbjct: 199 LEDYGRC------IGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKALERASE 252 Query: 506 SQKSILFENYGKKDPACVAKVKDLYK 429 + L G D VA+ ++++ Sbjct: 253 KDRERLISILGSGDEKLVAEAIEIFE 278
>IDSA_METJA (Q58270) Bifunctional short chain isoprenyl diphosphate synthase| [Includes: Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP synthetase) (Dimethylallyltranstransferase); Geranyltranstransferase (EC 2.5.1.10)] Length = 327 Score = 52.4 bits (124), Expect = 1e-06 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Frame = -3 Query: 686 NLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERAD 510 N E A++ +G FQ+QDD LD GD + +GK +G+DI + K + +V+ AL+ D Sbjct: 195 NEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGKKTIIVIHALKTLD 254 Query: 509 ESQKSILFENYGKKD 465 E +K L E G K+ Sbjct: 255 EDKKKRLLEILGNKN 269
>GGPS_SULSO (P95999) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)| (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] Length = 332 Score = 44.7 bits (104), Expect = 3e-04 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Frame = -3 Query: 650 VEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADESQKSILFENYG 474 + +G FQ+ DD L GD + +GK I +DI + K + LV++ L A E +K IL G Sbjct: 208 LNLGISFQIVDDILGIIGDEKELGKPIYSDIREGKKTILVIKTLSEATEDEKKILVSTLG 267 Query: 473 KKDPACVAKVKDL 435 K+ AK +DL Sbjct: 268 NKE----AKKEDL 276
>GGPS_SULAC (P39464) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)| (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] Length = 330 Score = 40.4 bits (93), Expect = 0.005 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 5/140 (3%) Frame = -3 Query: 692 GENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALER 516 G N + + + +G FQ+ DD L D + +GK + +DI + K + LV++ LE Sbjct: 192 GANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEKELGKPVFSDIREGKKTILVIKTLEL 251 Query: 515 ADESQKSILFENYGKKDPAC--VAKVKDLYKELNLEGLFHEYESESYKKLITDIE--AQP 348 E +K I+ + G K + + D+ K+ +L+ ++ E + YK I + + Sbjct: 252 CKEDEKKIVLKALGNKSASKEELMSSADIIKKYSLDYAYNLAE-KYYKNAIDSLNQVSSK 310 Query: 347 SIAVQKVLKSFLHKIYKRQK 288 S K LK +R+K Sbjct: 311 SDIPGKALKYLAEFTIRRRK 330
>ISPA_MICLU (O66126) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 291 Score = 36.6 bits (83), Expect = 0.079 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = -3 Query: 644 MGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADESQKSILFENY 477 +G FQ++DD LD G E IGK +G+D+ + K +++ + LE + + L E Y Sbjct: 210 VGLMFQIKDDILDVEGSFENIGKTVGSDLNNDKSTYVSLLGLEASKQLLNDKLTETY 266
>SC5A4_HUMAN (Q9NY91) Low affinity sodium-glucose cotransporter (Sodium/glucose| cotransporter 3) (Na(+)/glucose cotransporter 3) Length = 659 Score = 34.7 bits (78), Expect = 0.30 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 9/83 (10%) Frame = -3 Query: 566 DIEDYKCSWLV---------VQALERADESQKSILFENYGKKDPACVAKVKDLYKELNLE 414 D+ Y+ W++ + A E++ E + E+Y +K C+ K DL+ L Sbjct: 553 DVHLYRLCWVLRNSTEERIDIDAEEKSQEETDDGVEEDYPEKSRGCLKKAYDLFCGLQKG 612 Query: 413 GLFHEYESESYKKLITDIEAQPS 345 + E E+ K +TD +PS Sbjct: 613 PKLTKEEEEALSKKLTDTSERPS 635
>ISPA_BACST (Q08291) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 297 Score = 33.9 bits (76), Expect = 0.51 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = -3 Query: 716 LHVRCYSPGENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSW 540 +H G + ++ +G FQ++DD LD G E IGK +G+D + K ++ Sbjct: 192 VHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATY 251 Query: 539 LVVQALERADE 507 + +L A E Sbjct: 252 PALLSLAGAKE 262
>ISPB_HAEIN (P44916) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl| pyrophosphate synthetase) (OPP synthetase) Length = 329 Score = 33.5 bits (75), Expect = 0.67 Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 3/128 (2%) Frame = -3 Query: 683 LENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADE 507 L++YG +GT FQ+ DD LD + + +GK +G D+ + K + ++ A+ + Sbjct: 202 LQDYGRY------LGTAFQLVDDVLDYSANTQALGKNVGDDLAEGKPTLPLLHAMRHGNA 255 Query: 506 SQKSILFE--NYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQ 333 Q +++ E G K A + + + +L+ + + E+ +K + IE P + Sbjct: 256 QQAALIREAIEQGGKREAIDEVLAIMTEHKSLDYAMNRAKEEA-QKAVDAIEILPESEYK 314 Query: 332 KVLKSFLH 309 + L S + Sbjct: 315 QALISLAY 322
>SYA_MYCPU (Q98Q12) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 873 Score = 33.1 bits (74), Expect = 0.87 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 4/136 (2%) Frame = -3 Query: 683 LENYGAVENILVEMGTYFQVQDDYL----DCYGDPEFIGKIGTDIEDYKCSWLVVQALER 516 +ENY E + E+ TYF++ D++ + GD + +G D +++ + + R Sbjct: 263 VENYFQNEPVQREINTYFKIIADHMRSVANAIGDGAGVSNVGRD-------YIIRRLIRR 315 Query: 515 ADESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPSIAV 336 A + + G KD A + K+ + K + L +Y+++ K+I D E S + Sbjct: 316 AYRTGIQL-----GIKDEAFLYKLVPVIK----DSLIFDYDTKHVAKVIKDEELLFSKTI 366 Query: 335 QKVLKSFLHKIYKRQK 288 + K L K +++ K Sbjct: 367 DQG-KKILEKEFEKSK 381
>ISPA_HAEIN (P45204) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 295 Score = 33.1 bits (74), Expect = 0.87 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -3 Query: 644 MGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADESQKSI 492 +G FQVQDD LD GD IGK +G D++ K ++ + L A + + + Sbjct: 215 IGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDL 266
>ISPA_ECOLI (P22939) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 299 Score = 33.1 bits (74), Expect = 0.87 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Frame = -3 Query: 644 MGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADESQKSIL 489 +G FQVQDD LD GD +GK G D + K ++ + LE+A + + ++ Sbjct: 215 IGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLI 267
>ISPA_BACSU (P54383) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 272 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Frame = -3 Query: 698 SPGENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQAL 522 +P E++E + +G FQ++DD LD G E IGK +G+D + K ++ + +L Sbjct: 200 APEEDIETLRTFSS---HIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSL 256 Query: 521 ERA 513 E A Sbjct: 257 EGA 259
>ISPB_SHIFL (P0AD58) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl| pyrophosphate synthetase) (OPP synthetase) Length = 323 Score = 32.3 bits (72), Expect = 1.5 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = -3 Query: 689 ENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERA 513 + L++YG +GT FQ+ DD LD D E +GK +G D+ + K + ++ A+ Sbjct: 194 KGLQDYGRY------LGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHG 247 Query: 512 DESQKSIL 489 Q ++ Sbjct: 248 TPEQAQMI 255
>ISPB_ECOLI (P0AD57) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl| pyrophosphate synthetase) (OPP synthetase) Length = 323 Score = 32.3 bits (72), Expect = 1.5 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = -3 Query: 689 ENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERA 513 + L++YG +GT FQ+ DD LD D E +GK +G D+ + K + ++ A+ Sbjct: 194 KGLQDYGRY------LGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHG 247 Query: 512 DESQKSIL 489 Q ++ Sbjct: 248 TPEQAQMI 255
>OSH2_YEAST (Q12451) Oxysterol-binding protein homolog 2| Length = 1283 Score = 31.6 bits (70), Expect = 2.5 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Frame = -3 Query: 578 KIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKDLYKELNL-EGLFH 402 K ++++K Q E+ E S++ G+K V V+ +E L EG + Sbjct: 821 KTDQSLKNFKAEDKESQVKEKTKEIASSVI----GEKTIVAVTTVQKRKEEYLLKEGSYL 876 Query: 401 EYESESYKKLITDIEAQPSIAVQKVLKSFLHK 306 YE K+L D + +P I++ VLKS + K Sbjct: 877 GYEDGIRKRLSMDKDDRPKISLWAVLKSMVGK 908
>MUCEN_MOUSE (Q9R0H2) Endomucin precursor (Endomucin-1/2)| Length = 261 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%) Frame = +3 Query: 12 NSNLKNYLGNTPANSSNATI---QEKTKRQGRVQITEPSVYTK 131 +S +K + NTP +++N+T+ Q KT+ Q ++ TE SV T+ Sbjct: 103 SSTMKITVPNTPTSNANSTLPGSQNKTENQSSIRTTEISVTTQ 145
>TNR6_BOVIN (P51867) Tumor necrosis factor receptor superfamily member 6| precursor (FASLG receptor) (Apoptosis-mediating surface antigen FAS) (Apo-1 antigen) (CD95 antigen) Length = 323 Score = 30.8 bits (68), Expect = 4.3 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +2 Query: 425 VLCRDPSLLPHMLDLSFHSFQ-IECSFGSRQHAQELGQLARSTCNLQCRCQS 577 VLC + + D S HS + I CS +H E+ Q T N +CRC+S Sbjct: 80 VLCSEGN---EYTDKSHHSDKCIRCSICDEEHGLEVEQNCTRTRNTKCRCKS 128
>CRTE_CYAPA (P48368) Geranylgeranyl pyrophosphate synthetase homolog (EC| 2.5.1.29) (GGPP synthetase) (Farnesyltranstransferase) Length = 300 Score = 30.8 bits (68), Expect = 4.3 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 9/62 (14%) Frame = -3 Query: 644 MGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCS----WLVVQALERA----DESQKSI 492 +G FQ+ DD LD E +GK IG D++ K + W V +++++A +E+++ I Sbjct: 219 IGLAFQIIDDVLDIISTEEKLGKSIGKDLKTQKATYPSFWGVEESIKQAELLVEEAKEEI 278 Query: 491 LF 486 L+ Sbjct: 279 LY 280
>UL77_HCMVA (P16726) Protein UL77| Length = 642 Score = 30.4 bits (67), Expect = 5.7 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -3 Query: 689 ENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDI 561 ++L YG + LV+ QV+DD L + +GK+G D+ Sbjct: 378 QHLPGYGTITEELVQERLSGQVRDDVLSLWSRRLLVGKLGRDV 420
>PREA_PORPU (P51268) Prenyl transferase (EC 2.5.1.-)| Length = 323 Score = 30.0 bits (66), Expect = 7.4 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 11/84 (13%) Frame = -3 Query: 644 MGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVV----------QALERADESQK 498 MG FQ+ DD LD G + +GK G D + + ++ Q ++R ++ Sbjct: 207 MGLAFQIMDDVLDIAGSTKSLGKPSGADFMNGNLTAPILFALTQEGKLDQLIQREFSDER 266 Query: 497 SILFENYGKKDPACVAKVKDLYKE 426 I + K + K KDL KE Sbjct: 267 DISLALFLIKKSGGITKAKDLAKE 290
>M4K4_HUMAN (O95819) Mitogen-activated protein kinase kinase kinase kinase 4| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK) (Nck-interacting kinase) Length = 1239 Score = 29.6 bits (65), Expect = 9.7 Identities = 21/75 (28%), Positives = 31/75 (41%) Frame = +2 Query: 488 IECSFGSRQHAQELGQLARSTCNLQCRCQSCQ*IRDHHNNLDNHPELGSKFPSQQVCSLQ 667 +EC + + ++ +L R Q S Q H++ HP+ + P Q Q Sbjct: 494 LECRWREMEEHRQAERLQRQLQQEQAYLLSLQ-----HDHRRPHPQHSQQPPPPQ----Q 544 Query: 668 HRSSPSFHLESSSAH 712 RS PSFH AH Sbjct: 545 ERSKPSFHAPEPKAH 559 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,538,294 Number of Sequences: 219361 Number of extensions: 1999188 Number of successful extensions: 5143 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4978 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5140 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7309604013 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
