ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags20d12 |
|---|---|
| Clone Library Name | barley_pub |
>CAPP2_SORBI (P29194) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEPCase 2)| (PEPC 2) (CP28) Length = 960 Score = 125 bits (315), Expect = 2e-29 Identities = 60/77 (77%), Positives = 64/77 (83%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 DAYIT +NVCQAYTL RIRDP YH ALRPHLSKE+MD + A+ELV LNP SEYAPGL D Sbjct: 884 DAYITTLNVCQAYTLKRIRDPDYHVALRPHLSKEIMDPTKAASELVKLNPGSEYAPGLED 943 Query: 111 TLILTMKGIXXGXQNTG 61 TLILTMKGI G QNTG Sbjct: 944 TLILTMKGIAAGLQNTG 960
>CAPP2_MAIZE (P51059) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEPCase 2)| (PEPC 2) Length = 967 Score = 125 bits (314), Expect = 3e-29 Identities = 59/77 (76%), Positives = 65/77 (84%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 DAYIT +NVCQAYTL RIRDP YH ALRPHLSKE+MD++ AA++V LNP SEYAPGL D Sbjct: 891 DAYITTLNVCQAYTLKRIRDPDYHVALRPHLSKEIMDSTKAAADVVKLNPGSEYAPGLED 950 Query: 111 TLILTMKGIXXGXQNTG 61 TLILTMKGI G QNTG Sbjct: 951 TLILTMKGIAAGLQNTG 967
>CAPP1_ARATH (Q9MAH0) Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1)| (PEPC 1) (AtPPC1) Length = 967 Score = 119 bits (297), Expect = 3e-27 Identities = 55/77 (71%), Positives = 62/77 (80%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 D+YIT +NVCQAYTL RIRDP YH LRPH+SKE+ ++S A EL+ LNP SEYAPGL D Sbjct: 891 DSYITTLNVCQAYTLKRIRDPSYHVTLRPHISKEIAESSKPAKELIELNPTSEYAPGLED 950 Query: 111 TLILTMKGIXXGXQNTG 61 TLILTMKGI G QNTG Sbjct: 951 TLILTMKGIAAGLQNTG 967
>CAPP3_ARATH (Q84VW9) Phosphoenolpyruvate carboxylase 3 (EC 4.1.1.31) (PEPCase 3)| (PEPC 3) (AtPPC3) Length = 968 Score = 115 bits (288), Expect = 3e-26 Identities = 55/77 (71%), Positives = 61/77 (79%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 D+YIT +NVCQAYTL RIRD Y+ LRPH+SKE+M +S A ELV LNP SEYAPGL D Sbjct: 892 DSYITTLNVCQAYTLKRIRDANYNVTLRPHISKEIMQSSKSAQELVKLNPTSEYAPGLED 951 Query: 111 TLILTMKGIXXGXQNTG 61 TLILTMKGI G QNTG Sbjct: 952 TLILTMKGIAAGLQNTG 968
>CAPP1_SOYBN (Q02909) Phosphoenolpyruvate carboxylase, housekeeping isozyme (EC| 4.1.1.31) (PEPCase) (PEPC 1) Length = 967 Score = 115 bits (288), Expect = 3e-26 Identities = 55/77 (71%), Positives = 62/77 (80%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 D+YIT +NVCQAYTL RIRDP Y+ LRPH+SKE ++ S A EL+TLNP SEYAPGL D Sbjct: 891 DSYITTLNVCQAYTLKRIRDPNYNVKLRPHISKESIEISKPADELITLNPTSEYAPGLED 950 Query: 111 TLILTMKGIXXGXQNTG 61 TLILTMKGI G QNTG Sbjct: 951 TLILTMKGIAAGLQNTG 967
>CAPP1_MESCR (P10490) Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1)| (PEPC 1) Length = 966 Score = 115 bits (287), Expect = 4e-26 Identities = 55/77 (71%), Positives = 59/77 (76%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 D YIT +NVCQAYTL RIRDP + RPHLSKE+MD AAELV LNP SEYAPGL D Sbjct: 890 DPYITTLNVCQAYTLKRIRDPDFKVTERPHLSKEIMDAHKAAAELVKLNPTSEYAPGLED 949 Query: 111 TLILTMKGIXXGXQNTG 61 TLILTMKG+ G QNTG Sbjct: 950 TLILTMKGVAAGLQNTG 966
>CAPP_PICAB (P51063) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 963 Score = 113 bits (282), Expect = 1e-25 Identities = 57/77 (74%), Positives = 61/77 (79%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 D+YIT +NVCQAYTL RIRDP YH LRPHLSKE ++ AAELV LNP SEYAPGL D Sbjct: 889 DSYITTLNVCQAYTLKRIRDPNYHVNLRPHLSKE--SSTKPAAELVKLNPTSEYAPGLED 946 Query: 111 TLILTMKGIXXGXQNTG 61 TLILTMKGI G QNTG Sbjct: 947 TLILTMKGIAAGMQNTG 963
>CAPP_TOBAC (P27154) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 964 Score = 111 bits (277), Expect = 5e-25 Identities = 55/77 (71%), Positives = 61/77 (79%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 D+YIT +N+ QAYTL RIRDP YH LRPH+SK+ M+ S AAELV LNP SEYAPGL D Sbjct: 889 DSYITTLNLLQAYTLKRIRDPNYHVTLRPHISKDYME-SKSAAELVQLNPTSEYAPGLED 947 Query: 111 TLILTMKGIXXGXQNTG 61 TLILTMKGI G QNTG Sbjct: 948 TLILTMKGIAAGLQNTG 964
>CAPP1_FLAPR (Q01647) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 967 Score = 111 bits (277), Expect = 5e-25 Identities = 55/78 (70%), Positives = 60/78 (76%), Gaps = 1/78 (1%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKE-VMDTSXXAAELVTLNPASEYAPGLX 115 D+YIT +NVCQAYTL RIRDP YH LRPH+SKE + S A EL+ LNP SEYAPGL Sbjct: 890 DSYITTLNVCQAYTLKRIRDPNYHVTLRPHISKEYAAEPSKPADELIHLNPTSEYAPGLE 949 Query: 114 DTLILTMKGIXXGXQNTG 61 DTLILTMKGI G QNTG Sbjct: 950 DTLILTMKGIAAGMQNTG 967
>CAPP_FLAAU (Q42730) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 966 Score = 110 bits (275), Expect = 9e-25 Identities = 55/78 (70%), Positives = 59/78 (75%), Gaps = 1/78 (1%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKE-VMDTSXXAAELVTLNPASEYAPGLX 115 D YIT +NVCQAYTL RIRDP YH LRPH+SKE + S A EL+ LNP SEYAPGL Sbjct: 889 DPYITTLNVCQAYTLKRIRDPNYHVTLRPHISKEYAAEPSKPADELIHLNPTSEYAPGLE 948 Query: 114 DTLILTMKGIXXGXQNTG 61 DTLILTMKGI G QNTG Sbjct: 949 DTLILTMKGIAAGMQNTG 966
>CAPP2_FLATR (P30694) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 966 Score = 110 bits (275), Expect = 9e-25 Identities = 55/78 (70%), Positives = 59/78 (75%), Gaps = 1/78 (1%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKE-VMDTSXXAAELVTLNPASEYAPGLX 115 D YIT +NVCQAYTL RIRDP YH LRPH+SKE + S A EL+ LNP SEYAPGL Sbjct: 889 DPYITTLNVCQAYTLKRIRDPNYHVTLRPHISKEYAAEPSKPADELIHLNPTSEYAPGLE 948 Query: 114 DTLILTMKGIXXGXQNTG 61 DTLILTMKGI G QNTG Sbjct: 949 DTLILTMKGIAAGMQNTG 966
>CAPP2_ARATH (Q5GM68) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEPCase 2)| (PEPC 2) (AtPPC2) Length = 963 Score = 110 bits (275), Expect = 9e-25 Identities = 54/77 (70%), Positives = 62/77 (80%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 D YIT +NVCQAYTL +IRDP +H +RPHLSK+ M++S AAELV LNP SEYAPGL D Sbjct: 888 DPYITTLNVCQAYTLKQIRDPSFHVKVRPHLSKDYMESS-PAAELVKLNPKSEYAPGLED 946 Query: 111 TLILTMKGIXXGXQNTG 61 T+ILTMKGI G QNTG Sbjct: 947 TVILTMKGIAAGMQNTG 963
>CAPP1_FLATR (Q01648) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 967 Score = 110 bits (275), Expect = 9e-25 Identities = 55/78 (70%), Positives = 59/78 (75%), Gaps = 1/78 (1%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKE-VMDTSXXAAELVTLNPASEYAPGLX 115 D YIT +NVCQAYTL RIRDP YH LRPH+SKE + S A EL+ LNP SEYAPGL Sbjct: 890 DPYITTLNVCQAYTLKRIRDPNYHVTLRPHISKEYAAEPSKPADELIHLNPTSEYAPGLE 949 Query: 114 DTLILTMKGIXXGXQNTG 61 DTLILTMKGI G QNTG Sbjct: 950 DTLILTMKGIAAGMQNTG 967
>CAPP2_MESCR (P16097) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEPCase 2)| (PEPC 2) Length = 960 Score = 109 bits (273), Expect = 2e-24 Identities = 55/79 (69%), Positives = 62/79 (78%), Gaps = 2/79 (2%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXX--AAELVTLNPASEYAPGL 118 D+YIT +N QAYTL RIRDP Y+ LRPH+SKE MD++ AAELV LNP+SEYAPGL Sbjct: 882 DSYITTLNALQAYTLKRIRDPNYNVQLRPHISKEYMDSTSNKPAAELVKLNPSSEYAPGL 941 Query: 117 XDTLILTMKGIXXGXQNTG 61 DTLILTMKGI G QNTG Sbjct: 942 EDTLILTMKGIAAGMQNTG 960
>CAPP_SOLTU (P29196) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 965 Score = 108 bits (269), Expect = 5e-24 Identities = 54/77 (70%), Positives = 58/77 (75%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 D+YIT +NVCQAYTL RIRDP Y RPH+SKE M+ A ELV LNP SEYAPGL D Sbjct: 890 DSYITTLNVCQAYTLKRIRDPDYSVTPRPHISKEYMEAKP-ATELVNLNPTSEYAPGLED 948 Query: 111 TLILTMKGIXXGXQNTG 61 TLILTMKGI G QNTG Sbjct: 949 TLILTMKGIAAGMQNTG 965
>CAPP_MEDSA (Q02735) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 966 Score = 107 bits (267), Expect = 8e-24 Identities = 54/77 (70%), Positives = 59/77 (76%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 D+YIT +NV QAYTL RIRDP Y +RP +SKE +TS A ELVTLNP SEYAPGL D Sbjct: 890 DSYITTLNVFQAYTLKRIRDPNYKVEVRPPISKESAETSKPADELVTLNPTSEYAPGLED 949 Query: 111 TLILTMKGIXXGXQNTG 61 TLILTMKGI G QNTG Sbjct: 950 TLILTMKGIAAGMQNTG 966
>CAPP_AMAHP (Q43299) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 964 Score = 105 bits (261), Expect = 4e-23 Identities = 52/77 (67%), Positives = 57/77 (74%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 D Y T +NV Q YTL RIRDP +H +RPHLSKE MD + AA+LV LNP SEY PGL D Sbjct: 889 DPYTTTLNVFQVYTLKRIRDPSFHVTVRPHLSKE-MDANSLAADLVKLNPTSEYPPGLED 947 Query: 111 TLILTMKGIXXGXQNTG 61 TLILTMKGI G QNTG Sbjct: 948 TLILTMKGIAAGMQNTG 964
>CAPP1_SACHY (P29193) Phosphoenolpyruvate carboxylase, housekeeping isozyme (EC| 4.1.1.31) (PEPCase) (PEPC) Length = 966 Score = 104 bits (260), Expect = 5e-23 Identities = 51/77 (66%), Positives = 57/77 (74%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 D+YIT +NVCQAY L RIRDP + PHLSK++MD A+ELV LN SEYAPGL D Sbjct: 890 DSYITALNVCQAYMLKRIRDPGFQVNPGPHLSKDIMDMGKPASELVKLNTTSEYAPGLED 949 Query: 111 TLILTMKGIXXGXQNTG 61 TLILTMKGI G QNTG Sbjct: 950 TLILTMKGIAAGMQNTG 966
>CAPP2_SOYBN (P51061) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 967 Score = 100 bits (249), Expect = 9e-22 Identities = 50/76 (65%), Positives = 56/76 (73%) Frame = -3 Query: 288 AYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXDT 109 A IT +N+ QAYTL RIRDP Y+ +RP +SKE + S A ELV LNP SEYAPGL DT Sbjct: 892 APITTLNIVQAYTLKRIRDPNYNVKVRPRISKESAEASKSADELVKLNPTSEYAPGLEDT 951 Query: 108 LILTMKGIXXGXQNTG 61 LILTMKGI G QNTG Sbjct: 952 LILTMKGIAAGMQNTG 967
>CAPP_PHAVU (Q9AU12) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 968 Score = 98.2 bits (243), Expect = 5e-21 Identities = 49/74 (66%), Positives = 53/74 (71%) Frame = -3 Query: 282 ITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXDTLI 103 IT +NV QAYTL RIRDP Y RP +SKE + S A EL+ LNP SEYAPGL DTLI Sbjct: 895 ITTLNVFQAYTLKRIRDPNYKVKARPRISKESAEASKSADELIKLNPTSEYAPGLEDTLI 954 Query: 102 LTMKGIXXGXQNTG 61 LTMKGI G QNTG Sbjct: 955 LTMKGIAAGMQNTG 968
>CAPP1_SORBI (P29195) Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1)| (PEPC 1) (CP21) Length = 960 Score = 96.7 bits (239), Expect = 1e-20 Identities = 50/77 (64%), Positives = 56/77 (72%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXD 112 ++YIT +NVCQAYTL RIRDP + + +P LSKE D S ELV LN SEYAPGL D Sbjct: 885 ESYITTLNVCQAYTLKRIRDPSFQVSPQPPLSKEFTDESQ-PVELVQLNQQSEYAPGLED 943 Query: 111 TLILTMKGIXXGXQNTG 61 TLILTMKGI G QNTG Sbjct: 944 TLILTMKGIAAGMQNTG 960
>CAPP_PEA (P51062) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 967 Score = 92.4 bits (228), Expect = 3e-19 Identities = 51/78 (65%), Positives = 56/78 (71%), Gaps = 1/78 (1%) Frame = -3 Query: 291 DAYITXMNVCQAYTLXRIRDPXYHX-ALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLX 115 D+YIT +NV QAYTL RIRDP A R LS+E + + A ELVTLNP SEYAPGL Sbjct: 890 DSYITTLNVFQAYTLKRIRDPKSSVNASRLPLSRESPEATKPADELVTLNPTSEYAPGLE 949 Query: 114 DTLILTMKGIXXGXQNTG 61 DTLILTMKGI G QNTG Sbjct: 950 DTLILTMKGIAAGMQNTG 967
>CAPP1_MAIZE (P04711) Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1)| (PEPC 1) Length = 970 Score = 91.3 bits (225), Expect = 6e-19 Identities = 49/75 (65%), Positives = 53/75 (70%) Frame = -3 Query: 285 YITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXDTL 106 YIT +NV QAYTL RIRDP + +P LSKE D + A LV LNPASEY PGL DTL Sbjct: 897 YITTLNVFQAYTLKRIRDPNFKVTPQPPLSKEFADENKPAG-LVKLNPASEYPPGLEDTL 955 Query: 105 ILTMKGIXXGXQNTG 61 ILTMKGI G QNTG Sbjct: 956 ILTMKGIAAGMQNTG 970
>CAPP3_SORBI (P15804) Phosphoenolpyruvate carboxylase 3 (EC 4.1.1.31) (PEPCase 3)| (PEPC 3) (CP46) Length = 960 Score = 76.3 bits (186), Expect = 2e-14 Identities = 44/75 (58%), Positives = 48/75 (64%) Frame = -3 Query: 285 YITXMNVCQAYTLXRIRDPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAPGLXDTL 106 YIT +NV QAYTL RIRDP + +P LSKE D + A LV LN PGL DTL Sbjct: 888 YITTLNVFQAYTLKRIRDPSFKVTPQPPLSKEFADENKPAG-LVKLN-GERVPPGLEDTL 945 Query: 105 ILTMKGIXXGXQNTG 61 ILTMKGI G QNTG Sbjct: 946 ILTMKGIAAGMQNTG 960
>CAPP1_CHLRE (P81831) Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEP| carboxylase 1) (PEPCase 1) (PEPC 1) Length = 974 Score = 32.0 bits (71), Expect = 0.41 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 6/81 (7%) Frame = -3 Query: 285 YITXMNVCQAYTLXRIR------DPXYHXALRPHLSKEVMDTSXXAAELVTLNPASEYAP 124 Y+ +NV QA +L +R D Y+ + E++D + Sbjct: 899 YVAPLNVLQALSLQGLRKFRDGGDTEYNPS-----DPEIIDLLSRDPHKKGEGAQHPFVS 953 Query: 123 GLXDTLILTMKGIXXGXQNTG 61 + D L++T+KGI G QNTG Sbjct: 954 AMDDCLMITIKGIAAGMQNTG 974
>RL16_CLOPE (Q8XHT0) 50S ribosomal protein L16| Length = 144 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +1 Query: 112 ILQPRRVLTRRVQRHELGSRXARVHHL-LGQMGAQCXMVXWVT 237 +L P+RV R+VQR + + R + L G G Q W+T Sbjct: 1 MLMPKRVKHRKVQRGRMKGKATRGNFLAYGDFGIQATTCGWIT 43
>STRP_STRP1 (P10520) Streptokinase A precursor| Length = 440 Score = 28.5 bits (62), Expect = 4.6 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 5/46 (10%) Frame = -3 Query: 222 HXALRPHLSKEVMDTSXXA-----AELVTLNPASEYAPGLXDTLIL 100 H +RP+ K V + + + LNP ++ PGL DT +L Sbjct: 166 HVRVRPYKEKPVQNQAKSVDVEYTVQFTPLNPDDDFRPGLKDTKLL 211
>MMP11_RAT (Q499S5) Stromelysin-3 precursor (EC 3.4.24.-) (ST3) (SL-3) (Matrix| metalloproteinase-11) (MMP-11) Length = 491 Score = 28.5 bits (62), Expect = 4.6 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +3 Query: 90 PSWLR*GYPXAPARTHSPGSASRARQPXCSCPSPP 194 P+ L P PA PG AS +R C P PP Sbjct: 56 PAALPNSLPSVPASHWVPGPASSSRPLRCGVPDPP 90
>SODF_PSEPU (P09223) Superoxide dismutase [Fe] (EC 1.15.1.1)| Length = 197 Score = 28.1 bits (61), Expect = 6.0 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Frame = -3 Query: 231 PXYHXALRPHLSKEVMD------TSXXAAELVTLNPASEYAPGLXDTLILTMKG 88 P H AL+PH+SKE ++ + L L P +E+ + ++ T G Sbjct: 8 PYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGTEFEGKTLEEIVKTSSG 61
>STRP_STREQ (P00779) Streptokinase C precursor| Length = 440 Score = 28.1 bits (61), Expect = 6.0 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 5/46 (10%) Frame = -3 Query: 222 HXALRPHLSKEVMDTSXXA-----AELVTLNPASEYAPGLXDTLIL 100 H +RP+ K + + + + LNP ++ PGL DT +L Sbjct: 166 HVRVRPYKEKPIQNQAKSVDVEYTVQFTPLNPDDDFRPGLKDTKLL 211
>RL16_CLOTE (Q890P5) 50S ribosomal protein L16| Length = 147 Score = 28.1 bits (61), Expect = 6.0 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +1 Query: 112 ILQPRRVLTRRVQRHELGSRXARVHHL-LGQMGAQCXMVXWVT 237 +L P+RV R+VQR + + R + + G G Q W+T Sbjct: 1 MLMPKRVKHRKVQRGRMKGKATRGNFIAYGDYGIQATECGWIT 43
>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 27.7 bits (60), Expect = 7.8 Identities = 11/29 (37%), Positives = 12/29 (41%) Frame = +3 Query: 108 GYPXAPARTHSPGSASRARQPXCSCPSPP 194 G+P P R PG QP P PP Sbjct: 667 GFPGTPGRPGLPGEKGAVGQPGIGFPGPP 695 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,068,349 Number of Sequences: 219361 Number of extensions: 556862 Number of successful extensions: 1223 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 1164 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1209 length of database: 80,573,946 effective HSP length: 73 effective length of database: 64,560,593 effective search space used: 1549454232 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
