| Clone Name | rbags20d06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK111407.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-E09, full insert sequence Length = 1517 Score = 349 bits (176), Expect = 8e-93 Identities = 322/367 (87%), Gaps = 3/367 (0%) Strand = Plus / Minus Query: 362 gttatcaccagcagacccagcgcgccaatcagaaggtacttgatgatcggcttctcagtc 421 ||||| ||||| || ||||||||||| |||||||||||||| || || |||||||||||| Sbjct: 775 gttataaccagtaggcccagcgcgccgatcagaaggtacttaataattggcttctcagtc 716 Query: 422 atcacaatggtaacccacccaacgtgcggaagatagcctacagcccgccccatgatgtga 481 || | ||| |||||||| ||||| | || ||| | || ||||| |||||||| || ||| Sbjct: 715 atgataattgtaacccatccaacatatggcagaaaaccaacagctcgccccataatatga 656 Query: 482 tgctgctgaagccacagctgtccgtgcgcgtacagcagtcggtcatccccgaaattgttg 541 || ||||||||||| ||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 655 tgttgctgaagccaaagctgcccatgtgcatacagaagtcggtcatccccaaaattgtta 596 Query: 542 tcaccttttgtgaggatgtcaacttcagcactttccttggcgttcatgaaccttaatcac 601 |||||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||||| Sbjct: 595 tcaccttttgtgaggatgtcaacttctgcactctcct-ggcgttcatgaaccttgatcac 537 Query: 602 acggtgaacaattggaatttcacgaccatcaacattaaaaacaactatttctccagtacg 661 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 536 acggtgaacaattggaatttcacggccatcaacattaaaaacaactatttctccagtgc- 478 Query: 662 ggatggggttctttgctcatgcgcaaaaacaggatatcaccccttttgaatccaggctnc 721 |||| ||| |||||||||||| ||||||||||||| ||||| ||||| |||||||| | | Sbjct: 477 ggataggg-tctttgctcatgtgcaaaaacaggatgtcacctcttttaaatccaggttcc 419 Query: 722 atgctac 728 ||||||| Sbjct: 418 atgctac 412
>dbj|AK106215.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-H01, full insert sequence Length = 1063 Score = 349 bits (176), Expect = 8e-93 Identities = 322/367 (87%), Gaps = 3/367 (0%) Strand = Plus / Minus Query: 362 gttatcaccagcagacccagcgcgccaatcagaaggtacttgatgatcggcttctcagtc 421 ||||| ||||| || ||||||||||| |||||||||||||| || || |||||||||||| Sbjct: 764 gttataaccagtaggcccagcgcgccgatcagaaggtacttaataattggcttctcagtc 705 Query: 422 atcacaatggtaacccacccaacgtgcggaagatagcctacagcccgccccatgatgtga 481 || | ||| |||||||| ||||| | || ||| | || ||||| |||||||| || ||| Sbjct: 704 atgataattgtaacccatccaacatatggcagaaaaccaacagctcgccccataatatga 645 Query: 482 tgctgctgaagccacagctgtccgtgcgcgtacagcagtcggtcatccccgaaattgttg 541 || ||||||||||| ||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 644 tgttgctgaagccaaagctgcccatgtgcatacagaagtcggtcatccccaaaattgtta 585 Query: 542 tcaccttttgtgaggatgtcaacttcagcactttccttggcgttcatgaaccttaatcac 601 |||||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||||| Sbjct: 584 tcaccttttgtgaggatgtcaacttctgcactctcct-ggcgttcatgaaccttgatcac 526 Query: 602 acggtgaacaattggaatttcacgaccatcaacattaaaaacaactatttctccagtacg 661 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 525 acggtgaacaattggaatttcacggccatcaacattaaaaacaactatttctccagtgc- 467 Query: 662 ggatggggttctttgctcatgcgcaaaaacaggatatcaccccttttgaatccaggctnc 721 |||| ||| |||||||||||| ||||||||||||| ||||| ||||| |||||||| | | Sbjct: 466 ggataggg-tctttgctcatgtgcaaaaacaggatgtcacctcttttaaatccaggttcc 408 Query: 722 atgctac 728 ||||||| Sbjct: 407 atgctac 401
>dbj|AK102635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099N11, full insert sequence Length = 1065 Score = 349 bits (176), Expect = 8e-93 Identities = 322/367 (87%), Gaps = 3/367 (0%) Strand = Plus / Minus Query: 362 gttatcaccagcagacccagcgcgccaatcagaaggtacttgatgatcggcttctcagtc 421 ||||| ||||| || ||||||||||| |||||||||||||| || || |||||||||||| Sbjct: 766 gttataaccagtaggcccagcgcgccgatcagaaggtacttaataattggcttctcagtc 707 Query: 422 atcacaatggtaacccacccaacgtgcggaagatagcctacagcccgccccatgatgtga 481 || | ||| |||||||| ||||| | || ||| | || ||||| |||||||| || ||| Sbjct: 706 atgataattgtaacccatccaacatatggcagaaaaccaacagctcgccccataatatga 647 Query: 482 tgctgctgaagccacagctgtccgtgcgcgtacagcagtcggtcatccccgaaattgttg 541 || ||||||||||| ||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 646 tgttgctgaagccaaagctgcccatgtgcatacagaagtcggtcatccccaaaattgtta 587 Query: 542 tcaccttttgtgaggatgtcaacttcagcactttccttggcgttcatgaaccttaatcac 601 |||||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||||| Sbjct: 586 tcaccttttgtgaggatgtcaacttctgcactctcct-ggcgttcatgaaccttgatcac 528 Query: 602 acggtgaacaattggaatttcacgaccatcaacattaaaaacaactatttctccagtacg 661 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 527 acggtgaacaattggaatttcacggccatcaacattaaaaacaactatttctccagtgc- 469 Query: 662 ggatggggttctttgctcatgcgcaaaaacaggatatcaccccttttgaatccaggctnc 721 |||| ||| |||||||||||| ||||||||||||| ||||| ||||| |||||||| | | Sbjct: 468 ggataggg-tctttgctcatgtgcaaaaacaggatgtcacctcttttaaatccaggttcc 410 Query: 722 atgctac 728 ||||||| Sbjct: 409 atgctac 403
>dbj|AK058911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-G10, full insert sequence Length = 1083 Score = 349 bits (176), Expect = 8e-93 Identities = 322/367 (87%), Gaps = 3/367 (0%) Strand = Plus / Minus Query: 362 gttatcaccagcagacccagcgcgccaatcagaaggtacttgatgatcggcttctcagtc 421 ||||| ||||| || ||||||||||| |||||||||||||| || || |||||||||||| Sbjct: 797 gttataaccagtaggcccagcgcgccgatcagaaggtacttaataattggcttctcagtc 738 Query: 422 atcacaatggtaacccacccaacgtgcggaagatagcctacagcccgccccatgatgtga 481 || | ||| |||||||| ||||| | || ||| | || ||||| |||||||| || ||| Sbjct: 737 atgataattgtaacccatccaacatatggcagaaaaccaacagctcgccccataatatga 678 Query: 482 tgctgctgaagccacagctgtccgtgcgcgtacagcagtcggtcatccccgaaattgttg 541 || ||||||||||| ||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 677 tgttgctgaagccaaagctgcccatgtgcatacagaagtcggtcatccccaaaattgtta 618 Query: 542 tcaccttttgtgaggatgtcaacttcagcactttccttggcgttcatgaaccttaatcac 601 |||||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||||| Sbjct: 617 tcaccttttgtgaggatgtcaacttctgcactctcct-ggcgttcatgaaccttgatcac 559 Query: 602 acggtgaacaattggaatttcacgaccatcaacattaaaaacaactatttctccagtacg 661 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 558 acggtgaacaattggaatttcacggccatcaacattaaaaacaactatttctccagtgc- 500 Query: 662 ggatggggttctttgctcatgcgcaaaaacaggatatcaccccttttgaatccaggctnc 721 |||| ||| |||||||||||| ||||||||||||| ||||| ||||| |||||||| | | Sbjct: 499 ggataggg-tctttgctcatgtgcaaaaacaggatgtcacctcttttaaatccaggttcc 441 Query: 722 atgctac 728 ||||||| Sbjct: 440 atgctac 434
>gb|BT018041.1| Zea mays clone EL01N0531A03.c mRNA sequence Length = 869 Score = 258 bits (130), Expect = 2e-65 Identities = 316/376 (84%), Gaps = 3/376 (0%) Strand = Plus / Minus Query: 353 tctttcgaggttatcaccagcagacccagcgcgccaatcagaaggtacttgatgatcggc 412 |||||||| ||||| ||||||| |||||| ||||||||||| |||||||| || | || Sbjct: 654 tctttcgacgttatgaccagcaaacccagtgcgccaatcagcaggtacttaataaatggt 595 Query: 413 ttctcagtcatcacaatggtaacccacccaacgtgcggaagatagcctacagcccgcccc 472 ||||||||||| | ||| |||||||| ||||| | ||||| ||||| || || || ||| Sbjct: 594 ttctcagtcatgataattgtaacccagccaacatatggaaggtagcccaccgcacgtccc 535 Query: 473 atgatgtgatgctgctgaagccacagctgtccgtgcgcgtacagcagtcggtcatccccg 532 || ||||| || ||||| ||||| ||||| || || || || | |||||||||||||| Sbjct: 534 ataatgtggtgttgctggagccaaagctggccatgtgcatataatagtcggtcatcccca 475 Query: 533 aaattgttgtcaccttttgtgaggatgtcaacttcagcactttccttggcgttcatgaac 592 ||||| ||||||||||| ||||||||||| ||||| ||| | |||| | |||||||| || Sbjct: 474 aaattattgtcacctttggtgaggatgtccacttctgcagtgtcct-gacgttcatggac 416 Query: 593 cttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaacaactatttc 652 ||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 415 cttaatcactcggtgaacaattggaatctcacgaccatcgacattgaaaacaactatttc 356 Query: 653 tccagtacgggatggggttctttgctcatgcgcaaaaacaggatatcaccccttttgaat 712 ||| || | || || ||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 355 tcctgt--gcgaataggatctttgctcatatgcaaaaacaggatatcaccccttttaaat 298 Query: 713 ccaggctncatgctac 728 ||||||| |||||||| Sbjct: 297 ccaggctccatgctac 282
>gb|AY103758.1| Zea mays PCO086041 mRNA sequence Length = 1028 Score = 242 bits (122), Expect = 1e-60 Identities = 314/376 (83%), Gaps = 3/376 (0%) Strand = Plus / Minus Query: 353 tctttcgaggttatcaccagcagacccagcgcgccaatcagaaggtacttgatgatcggc 412 |||||||| ||||| ||||||| ||||| || |||||||| |||||||| || | || Sbjct: 687 tctttcgacgttatgaccagcaagcccagtgcaccaatcagcaggtacttaataaatggt 628 Query: 413 ttctcagtcatcacaatggtaacccacccaacgtgcggaagatagcctacagcccgcccc 472 ||||||||||| | ||| |||| ||| ||||| | ||||| ||||| || || || ||| Sbjct: 627 ttctcagtcatgataattgtaatccagccaacatatggaaggtagcccaccgcacgtccc 568 Query: 473 atgatgtgatgctgctgaagccacagctgtccgtgcgcgtacagcagtcggtcatccccg 532 || |||||||| ||||| ||||| ||||| || || || || | |||||||||||||| Sbjct: 567 ataatgtgatgttgctggagccaaagctgcccatgtgcatataatagtcggtcatcccca 508 Query: 533 aaattgttgtcaccttttgtgaggatgtcaacttcagcactttccttggcgttcatgaac 592 ||||| ||||||||||| ||||||||||| ||||| ||| | |||| | |||||||| || Sbjct: 507 aaattattgtcacctttggtgaggatgtccacttctgcagtgtcct-gacgttcatggac 449 Query: 593 cttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaacaactatttc 652 ||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 448 cttaatcactcggtgaacaattggaatctcacgaccatcgacattgaaaacaactatttc 389 Query: 653 tccagtacgggatggggttctttgctcatgcgcaaaaacaggatatcaccccttttgaat 712 ||| || | || || ||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 388 tcctgt--gcgaataggatctttgctcatatgcaaaaacaggatatcaccccttttaaat 331 Query: 713 ccaggctncatgctac 728 ||||||| |||||||| Sbjct: 330 ccaggctccatgctac 315
>dbj|AK071238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085B09, full insert sequence Length = 1035 Score = 232 bits (117), Expect = 1e-57 Identities = 314/376 (83%), Gaps = 3/376 (0%) Strand = Plus / Minus Query: 353 tctttcgaggttatcaccagcagacccagcgcgccaatcagaaggtacttgatgatcggc 412 |||||||| || || ||||||| ||||| ||||| || || |||||||| || | || Sbjct: 630 tctttcgatgtaatgaccagcaagcccagagcgccgatgagcaggtactttataaatggt 571 Query: 413 ttctcagtcatcacaatggtaacccacccaacgtgcggaagatagcctacagcccgcccc 472 ||||||||||| | || ||||||||||| || | |||||| ||||||||||||| ||| Sbjct: 570 ttctcagtcatgatgattgtaacccacccgacatatggaagaaagcctacagcccgtccc 511 Query: 473 atgatgtgatgctgctgaagccacagctgtccgtgcgcgtacagcagtcggtcatccccg 532 || |||||||| || |||||||| ||||| || || || || || || ||||| ||||| Sbjct: 510 ataatgtgatgttggtgaagccaaagctgcccatgtgcataaagaagacggtcgtcccca 451 Query: 533 aaattgttgtcaccttttgtgaggatgtcaacttcagcactttccttggcgttcatgaac 592 ||||| || |||||||| |||||||| |||||||||||||||||| | ||||||||| || Sbjct: 450 aaattattatcacctttcgtgaggatatcaacttcagcactttcc-tcgcgttcatggac 392 Query: 593 cttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaacaactatttc 652 ||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| || Sbjct: 391 cttaatcacacggtgaacaattggaatttcacggccatcaatgttgaaaacaactatctc 332 Query: 653 tccagtacgggatggggttctttgctcatgcgcaaaaacaggatatcaccccttttgaat 712 ||| || | |||| || |||||||||||| | | ||| |||||||| |||||||| ||| Sbjct: 331 tcctgtgc-ggat-aggatctttgctcatgtgtagaaaaaggatatcgccccttttaaat 274 Query: 713 ccaggctncatgctac 728 ||||||| |||||||| Sbjct: 273 ccaggctccatgctac 258
>ref|NM_185778.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 226 bits (114), Expect = 8e-56 Identities = 170/185 (91%), Gaps = 3/185 (1%) Strand = Plus / Minus Query: 544 accttttgtgaggatgtcaacttcagcactttccttggcgttcatgaaccttaatcacac 603 |||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||||||| Sbjct: 402 accttttgtgaggatgtcaacttctgcactctcct-ggcgttcatgaaccttgatcacac 344 Query: 604 ggtgaacaattggaatttcacgaccatcaacattaaaaacaactatttctccagtacggg 663 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | || Sbjct: 343 ggtgaacaattggaatttcacggccatcaacattaaaaacaactatttctccagtgc-gg 285 Query: 664 atggggttctttgctcatgcgcaaaaacaggatatcaccccttttgaatccaggctncat 723 || ||| |||||||||||| ||||||||||||| ||||| ||||| |||||||| | ||| Sbjct: 284 ataggg-tctttgctcatgtgcaaaaacaggatgtcacctcttttaaatccaggttccat 226 Query: 724 gctac 728 ||||| Sbjct: 225 gctac 221 Score = 129 bits (65), Expect = 1e-26 Identities = 155/185 (83%) Strand = Plus / Minus Query: 362 gttatcaccagcagacccagcgcgccaatcagaaggtacttgatgatcggcttctcagtc 421 ||||| ||||| || ||||||||||| |||||||||||||| || || |||||||||||| Sbjct: 638 gttataaccagtaggcccagcgcgccgatcagaaggtacttaataattggcttctcagtc 579 Query: 422 atcacaatggtaacccacccaacgtgcggaagatagcctacagcccgccccatgatgtga 481 || | ||| |||||||| ||||| | || ||| | || ||||| |||||||| || ||| Sbjct: 578 atgataattgtaacccatccaacatatggcagaaaaccaacagctcgccccataatatga 519 Query: 482 tgctgctgaagccacagctgtccgtgcgcgtacagcagtcggtcatccccgaaattgttg 541 || ||||||||||| ||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 518 tgttgctgaagccaaagctgcccatgtgcatacagaagtcggtcatccccaaaattgtta 459 Query: 542 tcacc 546 ||||| Sbjct: 458 tcacc 454
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 129 bits (65), Expect = 1e-26 Identities = 90/97 (92%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||||||||||||||| ||||||||||||||||||||||| ||| ||||| ||||||||| Sbjct: 1659 tgagtgaatctatact-ctaaaatatgtctatgtacatccgtatgtagtttatagtacaa 1717 Query: 61 tctctaaaatgttttatatttaggaacggaggaagta 97 ||||||||| || ||||||||||||||||||| |||| Sbjct: 1718 tctctaaaaggtcttatatttaggaacggagggagta 1754 Score = 97.6 bits (49), Expect = 5e-17 Identities = 86/97 (88%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||||||||||||||| |||||||||||| ||||| |||| ||| ||||| ||||| ||| Sbjct: 217254 tgagtgaatctatact-ctaaaatatgtcgatgtatatccgtatgtagttcatagtgcaa 217312 Query: 61 tctctaaaatgttttatatttaggaacggaggaagta 97 |||||||||||| ||||||||| |||||||| |||| Sbjct: 217313 tctctaaaatgtcttatatttaaaaacggagggagta 217349 Score = 63.9 bits (32), Expect = 7e-07 Identities = 78/92 (84%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 ||||| ||| |||||| ||||| ||| ||||||||||||| ||| ||||| || |||||| Sbjct: 142786 tgagttaatttatact-ctaaagtatatctatgtacatccgtatgtagtttattgtacaa 142728 Query: 61 tctctaaaatgttttatatttaggaacggagg 92 | | ||||||| |||||||||| |||||||| Sbjct: 142727 tttttaaaatgccttatatttagcaacggagg 142696 Score = 54.0 bits (27), Expect = 7e-04 Identities = 82/99 (82%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||||||||||| ||| ||||| ||||||||| ||||||| || ||||| |||| || Sbjct: 214 tgagtgaatctacact-ctaaagtatgtctatatacatccgtacatagtctgtagtgaaa 272 Query: 61 tctctaaaatgttttatatttaggaacggaggaagtatt 99 | ||| ||| | ||||||||||||||||||| |||||| Sbjct: 273 tttcttaaaagacttatatttaggaacggagggagtatt 311 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 |||||||||||||||||||||||| Sbjct: 194477 ttatatttaggaacggaggaagta 194500 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtattt 100 |||||||||| |||||||||||||||| Sbjct: 190775 ttatatttagaaacggaggaagtattt 190749 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 136707 ttatatttaggaacggagggagta 136684
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 121 bits (61), Expect = 3e-24 Identities = 89/97 (91%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||| ||||||||||| ||||||||||||||||||||||| ||| ||||| ||||||||| Sbjct: 5707 tgagcgaatctatact-ctaaaatatgtctatgtacatccgtatgtagtttatagtacaa 5765 Query: 61 tctctaaaatgttttatatttaggaacggaggaagta 97 ||||||||| || ||||||||||||||||||| |||| Sbjct: 5766 tctctaaaaggtcttatatttaggaacggagggagta 5802
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 121 bits (61), Expect = 3e-24 Identities = 89/97 (91%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||||||||||||||| ||||||||||||||||||||||| ||| ||||| |||||| || Sbjct: 5461 tgagtgaatctatact-ctaaaatatgtctatgtacatccgtatgtagtttatagtataa 5403 Query: 61 tctctaaaatgttttatatttaggaacggaggaagta 97 ||||||||| || ||||||||||||||||||| |||| Sbjct: 5402 tctctaaaaggtcttatatttaggaacggagggagta 5366 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 59 aatctctaaaatgttttatatttaggaacggaggaagtatt 99 ||||||||||| | |||||||||||| |||||| |||||| Sbjct: 21982 aatctctaaaaagacttatatttaggatcggagggagtatt 22022
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 111 bits (56), Expect = 3e-21 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 5 tgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaatctc 64 |||||||||||| |||||||||||||||||||||| ||| ||||| ||||| ||||||| Sbjct: 255 tgaatctatactt-taaaatatgtctatgtacatccgtatgtagtttatagtgcaatctc 313 Query: 65 taaaatgttttatatttaggaacggaggaagtatt 99 ||||| || ||||||||||||||||||| |||||| Sbjct: 314 taaaaagtcttatatttaggaacggagggagtatt 348 Score = 50.1 bits (25), Expect = 0.010 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagt 49 |||||||||||| ||| ||||||||||||||| ||||||| ||| |||| Sbjct: 8461 tgagtgaatctacact-ctaaaatatgtctatatacatccgtatgtagt 8414 Score = 40.1 bits (20), Expect = 10.0 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 3 agtgaatctatactnctaaaatatgtctatgtacat 38 |||||||||| ||| ||||||||||||||| ||||| Sbjct: 8326 agtgaatctacact-ctaaaatatgtctatatacat 8292
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 97.6 bits (49), Expect = 5e-17 Identities = 86/97 (88%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||||||||||||||| ||||||| ||||||| ||||||| ||| ||||| |||||| || Sbjct: 1127 tgagtgaatctatact-ctaaaatgtgtctatatacatccgtatgtagttcatagtaaaa 1069 Query: 61 tctctaaaatgttttatatttaggaacggaggaagta 97 |||||| || || ||||||||||||||||||| |||| Sbjct: 1068 tctctagaaggtcttatatttaggaacggagggagta 1032 Score = 54.0 bits (27), Expect = 7e-04 Identities = 63/74 (85%), Gaps = 2/74 (2%) Strand = Plus / Minus Query: 19 taaaatatgtctatgtacatccatatata--gttaatagtacaatctctaaaatgtttta 76 ||||||||| |||| |||||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 1297 taaaatatgactatatacatccatatatatagtccatagtgtaatctttaaaaggtctta 1238 Query: 77 tatttaggaacgga 90 |||||||||||||| Sbjct: 1237 tatttaggaacgga 1224 Score = 44.1 bits (22), Expect = 0.64 Identities = 37/42 (88%) Strand = Plus / Plus Query: 59 aatctctaaaatgttttatatttaggaacggaggaagtattt 100 |||||||| || || |||||||||||||||||| ||||||| Sbjct: 1340 aatctctagaaggtcttatatttaggaacggagagagtattt 1381
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 93.7 bits (47), Expect = 8e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 19 taaaatatgtctatgtacatccatatatagttaatagtacaatctctaaaatgttttata 78 |||||||||||||||||||||| ||| ||||| |||||||||||| ||||| || ||||| Sbjct: 23129 taaaatatgtctatgtacatccgtatgtagtttatagtacaatctttaaaaggtcttata 23070 Query: 79 tttaggaacggaggaagta 97 ||||| |||||||| |||| Sbjct: 23069 tttagaaacggagggagta 23051 Score = 61.9 bits (31), Expect = 3e-06 Identities = 83/98 (84%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagt-taatagtaca 59 |||||||||||||| | ||||||||||||||| ||||||| || |||| || |||| | Sbjct: 76908 tgagtgaatctata-ttctaaaatatgtctatatacatccgaatgtagtctactagtgaa 76850 Query: 60 atctctaaaatgttttatatttaggaacggaggaagta 97 | |||||||| | ||||||||||||||||||| |||| Sbjct: 76849 acctctaaaaagacttatatttaggaacggagggagta 76812 Score = 60.0 bits (30), Expect = 1e-05 Identities = 80/94 (85%), Gaps = 2/94 (2%) Strand = Plus / Minus Query: 5 tgaatctatactnctaaaatatgtctatgtacatccatatatagtt-aatagtacaatct 63 |||||||| ||| ||||||||||||||| | ||||||||| ||||| | ||||| || || Sbjct: 29926 tgaatctacact-ctaaaatatgtctatatgcatccatatgtagttcactagtaaaacct 29868 Query: 64 ctaaaatgttttatatttaggaacggaggaagta 97 |||||| | |||||||||| |||||||| |||| Sbjct: 29867 ctaaaaagacttatatttagaaacggagggagta 29834 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 59 aatctctaaaatgttttatatttaggaacggaggaagta 97 ||||||||||| | ||||||||||||||||||| |||| Sbjct: 76937 aatctctaaaaagacttatatttaggaacggagggagta 76975
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 87.7 bits (44), Expect = 5e-14 Identities = 70/76 (92%), Gaps = 2/76 (2%) Strand = Plus / Plus Query: 628 catcaacattaaaaacaactatttctccagtacgggatggggttctttgctcatgcgcaa 687 ||||||||||||||||||||||||||||||| | |||| ||| |||||||||||| |||| Sbjct: 9269437 catcaacattaaaaacaactatttctccagtgc-ggataggg-tctttgctcatgtgcaa 9269494 Query: 688 aaacaggatatcaccc 703 ||||||||| |||||| Sbjct: 9269495 aaacaggatgtcaccc 9269510 Score = 77.8 bits (39), Expect = 5e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 461 acagcccgccccatgatgtgatgctgctgaagccacagctgtccgtgcgcgtacagcagt 520 ||||| |||||||| || ||||| ||||||||||| ||||| || || || ||||| ||| Sbjct: 9268923 acagctcgccccataatatgatgttgctgaagccaaagctgcccatgtgcatacagaagt 9268982 Query: 521 cggtcatccccgaaattgttgtcacct 547 ||||||||||| |||||||| |||||| Sbjct: 9268983 cggtcatccccaaaattgttatcacct 9269009 Score = 69.9 bits (35), Expect = 1e-08 Identities = 48/51 (94%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 544 accttttgtgaggatgtcaacttcagcactttccttggcgttcatgaacct 594 |||||||||||||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 9269160 accttttgtgaggatgtcaacttctgcactctcc-tggcgttcatgaacct 9269209 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 591 accttaatcacacggtgaacaattggaatttcacg 625 ||||| ||||||||||||||||||||||||||||| Sbjct: 9269302 accttgatcacacggtgaacaattggaatttcacg 9269336 Score = 48.1 bits (24), Expect = 0.041 Identities = 36/40 (90%) Strand = Plus / Plus Query: 362 gttatcaccagcagacccagcgcgccaatcagaaggtact 401 ||||| ||||| || ||||||||||| ||||||||||||| Sbjct: 9268520 gttataaccagtaggcccagcgcgccgatcagaaggtact 9268559 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 atatttaggaacggaggaagtattt 100 |||||||| |||||||||||||||| Sbjct: 28191053 atatttagaaacggaggaagtattt 28191029 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 66 aaaatgttttatatttaggaacggaggaagtat 98 ||||| ||||||||||||| ||||||| ||||| Sbjct: 1215202 aaaattttttatatttagggacggagggagtat 1215234 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ttatatttaggaacggagga 93 |||||||||||||||||||| Sbjct: 20050909 ttatatttaggaacggagga 20050890 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 tatatttaggaacggaggaagtat 98 |||||||||| ||||||||||||| Sbjct: 13249750 tatatttagggacggaggaagtat 13249727
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 87.7 bits (44), Expect = 5e-14 Identities = 70/76 (92%), Gaps = 2/76 (2%) Strand = Plus / Plus Query: 628 catcaacattaaaaacaactatttctccagtacgggatggggttctttgctcatgcgcaa 687 ||||||||||||||||||||||||||||||| | |||| ||| |||||||||||| |||| Sbjct: 36778 catcaacattaaaaacaactatttctccagtgc-ggataggg-tctttgctcatgtgcaa 36835 Query: 688 aaacaggatatcaccc 703 ||||||||| |||||| Sbjct: 36836 aaacaggatgtcaccc 36851 Score = 77.8 bits (39), Expect = 5e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 461 acagcccgccccatgatgtgatgctgctgaagccacagctgtccgtgcgcgtacagcagt 520 ||||| |||||||| || ||||| ||||||||||| ||||| || || || ||||| ||| Sbjct: 36264 acagctcgccccataatatgatgttgctgaagccaaagctgcccatgtgcatacagaagt 36323 Query: 521 cggtcatccccgaaattgttgtcacct 547 ||||||||||| |||||||| |||||| Sbjct: 36324 cggtcatccccaaaattgttatcacct 36350 Score = 69.9 bits (35), Expect = 1e-08 Identities = 48/51 (94%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 544 accttttgtgaggatgtcaacttcagcactttccttggcgttcatgaacct 594 |||||||||||||||||||||||| ||||| ||| |||||||||||||||| Sbjct: 36501 accttttgtgaggatgtcaacttctgcactctcc-tggcgttcatgaacct 36550 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 591 accttaatcacacggtgaacaattggaatttcacg 625 ||||| ||||||||||||||||||||||||||||| Sbjct: 36643 accttgatcacacggtgaacaattggaatttcacg 36677 Score = 48.1 bits (24), Expect = 0.041 Identities = 36/40 (90%) Strand = Plus / Plus Query: 362 gttatcaccagcagacccagcgcgccaatcagaaggtact 401 ||||| ||||| || ||||||||||| ||||||||||||| Sbjct: 35861 gttataaccagtaggcccagcgcgccgatcagaaggtact 35900
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds Length = 5163 Score = 87.7 bits (44), Expect = 5e-14 Identities = 85/98 (86%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||||||||||||||| |||| || ||||||| ||||||| ||| ||||| ||||| || Sbjct: 3909 tgagtgaatctatact-ctaavatgtgtctatatacatccgtatgtagttcatagtggaa 3967 Query: 61 tctctaaaatgttttatatttaggaacggaggaagtat 98 |||||| || || |||||||||||||||| |||||||| Sbjct: 3968 tctctagaaggtcttatatttaggaacgggggaagtat 4005
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/97 (86%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||||||||||| ||| || |||||||||||||||||| |||| ||||| ||| | ||| Sbjct: 10482 tgagtgaatctacactt-tagaatatgtctatgtacatctatatgtagtttataatgcaa 10424 Query: 61 tctctaaaatgttttatatttaggaacggaggaagta 97 | ||||||| || ||||||||||||||||||| |||| Sbjct: 10423 tatctaaaaggtcttatatttaggaacggagggagta 10387 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 59 aatctctaaaatgttttatatttaggaacggaggaagtatttt 101 ||||||||||| || |||||||| | |||||||| |||||||| Sbjct: 10511 aatctctaaaaggtcttatattttgaaacggaggtagtatttt 10553
>dbj|AK099911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D13, full insert sequence Length = 1489 Score = 81.8 bits (41), Expect = 3e-12 Identities = 235/295 (79%), Gaps = 6/295 (2%) Strand = Plus / Minus Query: 413 ttctcagtcatcacaatggtaacccacccaacgtgcggaagatagcctacagcccgcccc 472 |||||||||||||| | || ||||||||| | | || ||||| |||| ||||| ||| Sbjct: 546 ttctcagtcatcaccaatgtcacccacccagctttgggtagataccctatggcccgtccc 487 Query: 473 atgatgtgatgctgctgaagccacagctgtccgtgcgcgtacagcagtcggtcatccccg 532 ||||||||||| ||||||||||| ||||| || || | ||| || | |||||| ||| Sbjct: 486 atgatgtgatgttgctgaagccaaagctgcccatgtgtgtaaagaattcggtcgtccata 427 Query: 533 aaattgttgtcaccttttgtgaggatgtcaacttcagcactttccttggcgttcatgaac 592 ||||||||||||||||||||||| ||||||| ||| | ||| | ||||| ||||| Sbjct: 426 ggattgttgtcaccttttgtgaggaaatcaacttgtgcattatcc-cgtcgttcgtgaac 368 Query: 593 cttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaacaactatttc 652 || ||| || || || || |||||||||||||| |||| |||| ||||||||||| || Sbjct: 367 ctcaataacgcgatggacgattggaatttcacggccat---cattgaaaacaactatatc 311 Query: 653 tccagtacgggatggggttctttgctcatgcgcaaaaacaggatatcaccccttt 707 ||| || | | || ||| | ||||||||| |||||||||||||||| ||||||| Sbjct: 310 tcctgttc-gtataggg-tgtttgctcatttgcaaaaacaggatatccccccttt 258
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 77.8 bits (39), Expect = 5e-11 Identities = 85/98 (86%), Gaps = 2/98 (2%) Strand = Plus / Plus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||||||||||| | | |||||||||| ||| || |||| ||| ||||| ||||| || Sbjct: 769 tgagtgaatctaca-tcctaaaatatgactacata-atccgtatgtagttcatagtggaa 826 Query: 61 tctctaaaatgttttatatttaggaacggaggaagtat 98 |||||||||||| ||||||||||||||||||||||||| Sbjct: 827 tctctaaaatgtcttatatttaggaacggaggaagtat 864 Score = 54.0 bits (27), Expect = 7e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 59 aatctctaaaatgttttatatttaggaacggaggaagta 97 ||||||||||| || ||||||||||||||||||| |||| Sbjct: 741 aatctctaaaaggtcttatatttaggaacggagggagta 703
>ref|NM_104138.2| Arabidopsis thaliana peptidase AT1G52600 mRNA, complete cds Length = 818 Score = 73.8 bits (37), Expect = 7e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 588 tgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaacaact 647 ||||||||||| ||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 392 tgaaccttaatgacacgatggacaatgggaatatcacgaccatcaacattgaaaacaaca 333 Query: 648 atttc 652 ||||| Sbjct: 332 atttc 328
>gb|AY096703.1| Arabidopsis thaliana putative signal peptidase subunit (At1g52600) mRNA, complete cds Length = 574 Score = 73.8 bits (37), Expect = 7e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 588 tgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaacaact 647 ||||||||||| ||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 305 tgaaccttaatgacacgatggacaatgggaatatcacgaccatcaacattgaaaacaaca 246 Query: 648 atttc 652 ||||| Sbjct: 245 atttc 241
>gb|AY064032.1| Arabidopsis thaliana putative signal peptidase subunit (At1g52600) mRNA, complete cds Length = 825 Score = 73.8 bits (37), Expect = 7e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 588 tgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaacaact 647 ||||||||||| ||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 391 tgaaccttaatgacacgatggacaatgggaatatcacgaccatcaacattgaaaacaaca 332 Query: 648 atttc 652 ||||| Sbjct: 331 atttc 327
>dbj|AK220581.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-87-D04 Length = 783 Score = 73.8 bits (37), Expect = 7e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 588 tgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaacaact 647 ||||||||||| ||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 391 tgaaccttaatgacacgatggacaatgggaatatcacgaccatcaacattgaaaacaaca 332 Query: 648 atttc 652 ||||| Sbjct: 331 atttc 327
>gb|AY084305.1| Arabidopsis thaliana clone 103157 mRNA, complete sequence Length = 691 Score = 73.8 bits (37), Expect = 7e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 588 tgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaacaact 647 ||||||||||| ||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 391 tgaaccttaatgacacgatggacaatgggaatatcacgaccatcaacattgaaaacaaca 332 Query: 648 atttc 652 ||||| Sbjct: 331 atttc 327
>gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0082F22, complete sequence Length = 176038 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 591 accttaatcacacggtgaacaattggaatttcacg 625 ||||||||||||||||||||||||||||||||||| Sbjct: 114211 accttaatcacacggtgaacaattggaatttcacg 114177 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 544 accttttgtgaggatgtcaacttcagcactttcct 578 |||||| |||||||| ||||||||||||||||||| Sbjct: 114376 acctttcgtgaggatatcaacttcagcactttcct 114342 Score = 52.0 bits (26), Expect = 0.003 Identities = 74/90 (82%) Strand = Plus / Minus Query: 458 cctacagcccgccccatgatgtgatgctgctgaagccacagctgtccgtgcgcgtacagc 517 ||||||||||| ||||| |||||||| || |||||||| ||||| || || || || || Sbjct: 114605 cctacagcccgtcccataatgtgatgttggtgaagccaaagctgcccatgtgcataaaga 114546 Query: 518 agtcggtcatccccgaaattgttgtcacct 547 || ||||| ||||| ||||| || |||||| Sbjct: 114545 agacggtcgtccccaaaattattatcacct 114516
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 591 accttaatcacacggtgaacaattggaatttcacg 625 ||||||||||||||||||||||||||||||||||| Sbjct: 13151434 accttaatcacacggtgaacaattggaatttcacg 13151400 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 544 accttttgtgaggatgtcaacttcagcactttcct 578 |||||| |||||||| ||||||||||||||||||| Sbjct: 13151599 acctttcgtgaggatatcaacttcagcactttcct 13151565 Score = 52.0 bits (26), Expect = 0.003 Identities = 74/90 (82%) Strand = Plus / Minus Query: 458 cctacagcccgccccatgatgtgatgctgctgaagccacagctgtccgtgcgcgtacagc 517 ||||||||||| ||||| |||||||| || |||||||| ||||| || || || || || Sbjct: 13151828 cctacagcccgtcccataatgtgatgttggtgaagccaaagctgcccatgtgcataaaga 13151769 Query: 518 agtcggtcatccccgaaattgttgtcacct 547 || ||||| ||||| ||||| || |||||| Sbjct: 13151768 agacggtcgtccccaaaattattatcacct 13151739 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||| ||||| Sbjct: 23958337 ttatatttaggaacggagggagtat 23958313 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 atatttaggaacggaggaagtattt 100 ||||||||||||||||| ||||||| Sbjct: 17287467 atatttaggaacggagggagtattt 17287443
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/97 (84%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||||||||||||| | ||||| |||||||| ||||| | ||| ||||| ||| | || Sbjct: 178046 tgagtgaatctatatt--taaaagatgtctatatacattcgtatgtagttcataatgtaa 178103 Query: 61 tctctaaaatgttttatatttaggaacggaggaagta 97 | |||||||||| ||||||||||||||||||| |||| Sbjct: 178104 tatctaaaatgtcttatatttaggaacggagggagta 178140 Score = 63.9 bits (32), Expect = 7e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 46 tagttaatagtacaatctctaaaatgttttatatttaggaacggaggaagta 97 ||||| ||||| ||||||| ||||||| ||||||||||||||||| |||||| Sbjct: 178031 tagtttatagtgcaatctccaaaatgtcttatatttaggaacggatgaagta 177980
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 63.9 bits (32), Expect = 7e-07 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 taaaatatgtctatgtacatccatatatagtt-aatagtacaatctctaaaatgttttat 77 |||||||||||||| ||||||| ||| ||||| |||||| |||||||| || | |||| Sbjct: 71775 taaaatatgtctatatacatccgtatgtagttcaatagtgaaatctctagaaagacttat 71834 Query: 78 atttaggaacggaggaagta 97 ||||||||||||||| |||| Sbjct: 71835 atttaggaacggagggagta 71854 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 90871 ttatatttaggaacggagggagta 90894 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 73889 ttatatttaggaacggagggagta 73866
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 61.9 bits (31), Expect = 3e-06 Identities = 82/98 (83%), Gaps = 2/98 (2%) Strand = Plus / Plus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||||||||||||||| |||||| ||||| ||||||| ||| | ||| ||||| || Sbjct: 23178 tgagtgaatctatact--taaaatgcatctatatacatccgtatgtggttcatagtgaaa 23235 Query: 61 tctctaaaatgttttatatttaggaacggaggaagtat 98 |||||| || | ||||||||||||||||||||||||| Sbjct: 23236 tctctacaaagacttatatttaggaacggaggaagtat 23273 Score = 56.0 bits (28), Expect = 2e-04 Identities = 35/36 (97%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 5 tgaatctatactnctaaaatatgtctatgtacatcc 40 |||||||||||| ||||||||||||||||||||||| Sbjct: 51861 tgaatctatact-ctaaaatatgtctatgtacatcc 51827 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 51909 ttatatttaggaacggagggagta 51932 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 23135 ttatatttaggaacggagggagta 23112
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 60.0 bits (30), Expect = 1e-05 Identities = 82/98 (83%), Gaps = 1/98 (1%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||||||||||| ||| |||||||| |||||| | ||||| ||| |||| ||| | || Sbjct: 1311 tgagtgaatctacact-ctaaaatacgtctatattcatccgtatgtagtccatattcaaa 1253 Query: 61 tctctaaaatgttttatatttaggaacggaggaagtat 98 ||||||||| | ||||||||||||||||||| ||||| Sbjct: 1252 tctctaaaaagacttatatttaggaacggagggagtat 1215
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 60.0 bits (30), Expect = 1e-05 Identities = 82/98 (83%), Gaps = 1/98 (1%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||||||||||| ||| |||||||| |||||| | ||||| ||| |||| ||| | || Sbjct: 1317 tgagtgaatctacact-ctaaaatacgtctatattcatccgtatgtagtgcatattcaaa 1259 Query: 61 tctctaaaatgttttatatttaggaacggaggaagtat 98 ||||||||| | ||||||||||||||||||| ||||| Sbjct: 1258 tctctaaaaagacttatatttaggaacggagggagtat 1221
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 20 aaaatatgtctatgtacatccatatatagttaatagtacaatctctaaaatgttttatat 79 |||||||| ||| ||||||| ||| ||||| ||||| |||||||||| || |||||| Sbjct: 66683 aaaatatgactacatacatccgtatgtagtttatagtgagatctctaaaaggtcttatat 66624 Query: 80 ttaggaacggaggaagta 97 ||||||||||||| |||| Sbjct: 66623 ttaggaacggagggagta 66606 Score = 54.0 bits (27), Expect = 7e-04 Identities = 80/95 (84%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 5 tgaatctatactnctaaaatatgtctatgtacatccatatatagttaa-tagtacaatct 63 |||||||||||| ||||| ||||||||| ||||||| ||| |||| | |||| ||||| Sbjct: 14582 tgaatctatact-ctaaagtatgtctatatacatccgtatgtagtccactagtgaaatct 14524 Query: 64 ctaaaatgttttatatttaggaacggaggaagtat 98 ||| || | ||||||||||||||||||| ||||| Sbjct: 14523 ctacaaagacttatatttaggaacggagggagtat 14489 Score = 52.0 bits (26), Expect = 0.003 Identities = 79/94 (84%), Gaps = 2/94 (2%) Strand = Plus / Plus Query: 5 tgaatctatactnctaaaatatgtctatgtacatccatatatagttaa-tagtacaatct 63 |||||||||||| ||||| ||||||||| ||||||| ||| |||| | |||| ||||| Sbjct: 89214 tgaatctatact-ctaaagtatgtctatatacatccgtatgtagtccactagtgaaatct 89272 Query: 64 ctaaaatgttttatatttaggaacggaggaagta 97 ||| || | ||||||||||||||||||| |||| Sbjct: 89273 ctagaaagacttatatttaggaacggagggagta 89306 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 |||||||||||||||||||||||| Sbjct: 81277 ttatatttaggaacggaggaagta 81300 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 |||||||||||||||||||||||| Sbjct: 14630 ttatatttaggaacggaggaagta 14653 Score = 44.1 bits (22), Expect = 0.64 Identities = 40/46 (86%) Strand = Plus / Minus Query: 53 tagtacaatctctaaaatgttttatatttaggaacggaggaagtat 98 ||||| ||| ||||||| | ||||||||||||||||||| ||||| Sbjct: 81180 tagtaaaatttctaaaaagacttatatttaggaacggagggagtat 81135 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||| ||||| Sbjct: 89166 ttatatttaggaacggagggagtat 89142 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 59 aatctctaaaatgttttatatttaggaacggag 91 ||||||||||| | |||||||||||||||||| Sbjct: 83503 aatctctaaaaagacttatatttaggaacggag 83471 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 65 taaaatgttttatatttaggaacggaggaagta 97 ||||| || ||||||||||||||||||| |||| Sbjct: 66735 taaaaggtcttatatttaggaacggagggagta 66767
>gb|AF287726.1|AF287726 Hordeum vulgare clone pFL699 1,4-beta-D xylan xylanohydrolase gene, complete cds Length = 5474 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 18 ctaaaatatgtctatgtacatccatatatagttaatagtacaatctctaaaatgttttat 77 ||||||||||||||| ||||| | |||||||| ||| || ||||||||||| || |||| Sbjct: 448 ctaaaatatgtctatatacattcgcatatagttcatattaaaatctctaaaaggtcttat 389 Query: 78 atttaggaacgga 90 |||| | |||||| Sbjct: 388 attttgaaacgga 376
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete cds Length = 15688 Score = 58.0 bits (29), Expect = 4e-05 Identities = 70/81 (86%), Gaps = 2/81 (2%) Strand = Plus / Minus Query: 19 taaaatatgtctatg-tacatccatatatagtt-aatagtacaatctctaaaatgtttta 76 ||||||||||||||| ||||||| ||| ||||| |||||| ||||||||||| | ||| Sbjct: 8801 taaaatatgtctatgatacatccgtatgtagtttaatagtggaatctctaaaaagactta 8742 Query: 77 tatttaggaacggaggaagta 97 ||||||||||| |||| |||| Sbjct: 8741 tatttaggaactgagggagta 8721
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/95 (83%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 3 agtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaatc 62 ||||||| |||||| |||||||||||||| |||||| ||||||||| ||||| ||| Sbjct: 30770 agtgaatatatactt-taaaatatgtctatatacatctgtatatagttcatagtgtaatt 30828 Query: 63 tctaaaatgttttatatttaggaacggaggaagta 97 ||||| || ||||||| ||||||||||| |||| Sbjct: 30829 cgtaaaaggtcttatattcaggaacggagggagta 30863
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 56.0 bits (28), Expect = 2e-04 Identities = 41/44 (93%), Gaps = 1/44 (2%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatat 44 |||||||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 70050 tgagtgaatctacact-ctaaaatatgtctatatacatccatat 70008
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 54.0 bits (27), Expect = 7e-04 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatat 46 |||||||||||||||| |||||||||| ||| ||||||||||||| Sbjct: 49511 tgagtgaatctatactt-taaaatatgtttatatacatccatatat 49467
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 54.0 bits (27), Expect = 7e-04 Identities = 82/99 (82%), Gaps = 1/99 (1%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaa 60 |||||| ||||| ||| ||||| ||||||||| ||||||| ||| ||||| |||| || Sbjct: 7508 tgagtgcatctacact-ctaaagtatgtctatatacatccgtatgtagttcgtagtggaa 7450 Query: 61 tctctaaaatgttttatatttaggaacggaggaagtatt 99 ||||||||| | |||||||||||| ||||| |||||| Sbjct: 7449 tctctaaaaagacctatatttaggaatggagggagtatt 7411 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 59 aatctctaaaatgttttatatttaggaacggag 91 ||||||||||| | |||||||||||||||||| Sbjct: 7536 aatctctaaaaagacttatatttaggaacggag 7568
>ref|NM_112441.3| Arabidopsis thaliana peptidase AT3G15710 mRNA, complete cds Length = 872 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 606 tgaacaattggaatttcacgaccatcaaca 635 |||||||| ||||||||||||||||||||| Sbjct: 410 tgaacaatgggaatttcacgaccatcaaca 381 Score = 44.1 bits (22), Expect = 0.64 Identities = 76/94 (80%) Strand = Plus / Minus Query: 351 agtctttcgaggttatcaccagcagacccagcgcgccaatcagaaggtacttgatgatcg 410 |||||||||| ||||| || |||| ||||| || ||||| || | ||||||||||| | Sbjct: 664 agtctttcgatgttataacgagcaaacccaatgcaccaatgagtatatacttgatgatag 605 Query: 411 gcttctcagtcatcacaatggtaacccacccaac 444 |||| || ||||| | ||| |||||||| ||||| Sbjct: 604 gcttttctgtcatgataatagtaacccatccaac 571
>ref|XM_512154.1| PREDICTED: Pan troglodytes similar to microsomal signal peptidase subunit (LOC455447), mRNA Length = 451 Score = 52.0 bits (26), Expect = 0.003 Identities = 62/74 (83%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 ||||||||| || || || | |||||| |||||||| || || || ||||| |||||||| Sbjct: 437 ttcatgaactttgattactctgtgaactattggaatgtctcgtccttcaactttaaaaac 378 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 377 aactatttcaccag 364
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 52.0 bits (26), Expect = 0.003 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 18 ctaaaatatgtctatgtacatccatatatagttaa-tagtacaatctctaaaatgtttta 76 ||||||||||||||| ||||||| ||||| || | |||| |||||||| || | ||| Sbjct: 67868 ctaaaatatgtctatatacatccgtatatggtccactagtgaaatctctacaaagactta 67927 Query: 77 tatttaggaacggaggaagtat 98 |||||||||||||||| ||||| Sbjct: 67928 tatttaggaacggagggagtat 67949 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 53 tagtacaatctctaaaatgttttatatttaggaacgga 90 ||||| ||||||||||| | ||||||||||||||||| Sbjct: 4777 tagtagaatctctaaaaagacttatatttaggaacgga 4740 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtattttc 102 ||||||||||||||||||| |||| |||| Sbjct: 55698 ttatatttaggaacggagggagtaatttc 55726 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 93752 ttatatttaggaacggagggagta 93729
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 73 tttatatttaggaacggaggaagtat 98 |||||||||||||||||||||||||| Sbjct: 27461 tttatatttaggaacggaggaagtat 27436
>gb|BT015660.1| Arabidopsis thaliana At3g15710 gene, complete cds Length = 543 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 606 tgaacaattggaatttcacgaccatcaaca 635 |||||||| ||||||||||||||||||||| Sbjct: 287 tgaacaatgggaatttcacgaccatcaaca 258 Score = 44.1 bits (22), Expect = 0.64 Identities = 76/94 (80%) Strand = Plus / Minus Query: 351 agtctttcgaggttatcaccagcagacccagcgcgccaatcagaaggtacttgatgatcg 410 |||||||||| ||||| || |||| ||||| || ||||| || | ||||||||||| | Sbjct: 541 agtctttcgatgttataacgagcaaacccaatgcaccaatgagtatatacttgatgatag 482 Query: 411 gcttctcagtcatcacaatggtaacccacccaac 444 |||| || ||||| | ||| |||||||| ||||| Sbjct: 481 gcttttctgtcatgataatagtaacccatccaac 448
>gb|BT015149.1| Arabidopsis thaliana At3g15710 gene, complete cds Length = 805 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 606 tgaacaattggaatttcacgaccatcaaca 635 |||||||| ||||||||||||||||||||| Sbjct: 370 tgaacaatgggaatttcacgaccatcaaca 341 Score = 44.1 bits (22), Expect = 0.64 Identities = 76/94 (80%) Strand = Plus / Minus Query: 351 agtctttcgaggttatcaccagcagacccagcgcgccaatcagaaggtacttgatgatcg 410 |||||||||| ||||| || |||| ||||| || ||||| || | ||||||||||| | Sbjct: 624 agtctttcgatgttataacgagcaaacccaatgcaccaatgagtatatacttgatgatag 565 Query: 411 gcttctcagtcatcacaatggtaacccacccaac 444 |||| || ||||| | ||| |||||||| ||||| Sbjct: 564 gcttttctgtcatgataatagtaacccatccaac 531
>ref|NM_033280.1| Homo sapiens SEC11-like 3 (S. cerevisiae) (SEC11L3), mRNA Length = 794 Score = 52.0 bits (26), Expect = 0.003 Identities = 62/74 (83%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 ||||||||| || || || | |||||| |||||||| || || || ||||| |||||||| Sbjct: 402 ttcatgaactttgattactctgtgaactattggaatgtctcgtccttcaactttaaaaac 343 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 342 aactatttcaccag 329
>emb|CR858452.1| Pongo pygmaeus mRNA; cDNA DKFZp469M0613 (from clone DKFZp469M0613) Length = 864 Score = 52.0 bits (26), Expect = 0.003 Identities = 62/74 (83%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 ||||||||| || || || | |||||| |||||||| || || || ||||| |||||||| Sbjct: 392 ttcatgaactttgattactctgtgaactattggaatgtctcgtccttcaactttaaaaac 333 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 332 aactatttcaccag 319
>gb|AC021241.10| Homo sapiens chromosome 18, clone RP11-350K6, complete sequence Length = 160748 Score = 52.0 bits (26), Expect = 0.003 Identities = 62/74 (83%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 ||||||||| || || || | |||||| |||||||| || || || ||||| |||||||| Sbjct: 103644 ttcatgaactttgattactctgtgaactattggaatgtctcgtccttcaactttaaaaac 103585 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 103584 aactatttcaccag 103571
>gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, complete sequence Length = 195609 Score = 52.0 bits (26), Expect = 0.003 Identities = 62/74 (83%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 ||||||||| || || || | |||||| |||||||| || || || ||||| |||||||| Sbjct: 18480 ttcatgaactttgattactctgtgaactattggaatgtctcgtccttcaactttaaaaac 18421 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 18420 aactatttcaccag 18407
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 52.0 bits (26), Expect = 0.003 Identities = 41/46 (89%) Strand = Plus / Plus Query: 53 tagtacaatctctaaaatgttttatatttaggaacggaggaagtat 98 ||||| ||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 208459 tagtaaaatctctaaaaagatttatatttagaaacggagggagtat 208504 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtatttt 101 ||||||||||| ||||||| |||||||| Sbjct: 197515 ttatatttagggacggagggagtatttt 197488
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagt 49 |||||||||||| ||| |||||||||||||| ||||||||||| |||| Sbjct: 50564 tgagtgaatctacactt-taaaatatgtctatatacatccatatgtagt 50517
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 464 gcccgccccatgatgtgatgctgctgaagccacagctg 501 ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 35595331 gcccgtcccatgatgtgatgttgctgaagccaaagctg 35595368 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||||||||| Sbjct: 19275794 ttatatttaggaacggaggaagtat 19275770 Score = 40.1 bits (20), Expect = 10.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 ctaaaatgttttatatttaggaacggaggaagtatt 99 ||||||| | ||||||| ||||||||||||||||| Sbjct: 25453034 ctaaaatttcttatattctggaacggaggaagtatt 25453069 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 10956556 ttatatttaggaacggagggagta 10956533
>gb|AF212233.1|AF212233 Homo sapiens microsomal signal peptidase subunit mRNA, complete cds Length = 794 Score = 52.0 bits (26), Expect = 0.003 Identities = 62/74 (83%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 ||||||||| || || || | |||||| |||||||| || || || ||||| |||||||| Sbjct: 402 ttcatgaactttgattactctgtgaactattggaatgtctcgtccttcaactttaaaaac 343 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 342 aactatttcaccag 329
>emb|BX826032.1|CNS0A69G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL80ZE04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 855 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 606 tgaacaattggaatttcacgaccatcaaca 635 |||||||| ||||||||||||||||||||| Sbjct: 393 tgaacaatgggaatttcacgaccatcaaca 364 Score = 44.1 bits (22), Expect = 0.64 Identities = 76/94 (80%) Strand = Plus / Minus Query: 351 agtctttcgaggttatcaccagcagacccagcgcgccaatcagaaggtacttgatgatcg 410 |||||||||| ||||| || |||| ||||| || ||||| || | ||||||||||| | Sbjct: 647 agtctttcgatgttataacgagcaaacccaatgcaccaatgagtatatacttgatgatag 588 Query: 411 gcttctcagtcatcacaatggtaacccacccaac 444 |||| || ||||| | ||| |||||||| ||||| Sbjct: 587 gcttttctgtcatgataatagtaacccatccaac 554
>gb|AY086118.1| Arabidopsis thaliana clone 21563 mRNA, complete sequence Length = 820 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 606 tgaacaattggaatttcacgaccatcaaca 635 |||||||| ||||||||||||||||||||| Sbjct: 410 tgaacaatgggaatttcacgaccatcaaca 381 Score = 44.1 bits (22), Expect = 0.64 Identities = 76/94 (80%) Strand = Plus / Minus Query: 351 agtctttcgaggttatcaccagcagacccagcgcgccaatcagaaggtacttgatgatcg 410 |||||||||| ||||| || |||| ||||| || ||||| || | ||||||||||| | Sbjct: 664 agtctttcgatgttataacgagcaaacccaatgcaccaatgagtatatacttgatgatag 605 Query: 411 gcttctcagtcatcacaatggtaacccacccaac 444 |||| || ||||| | ||| |||||||| ||||| Sbjct: 604 gcttttctgtcatgataatagtaacccatccaac 571
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 464 gcccgccccatgatgtgatgctgctgaagccacagctg 501 ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 111723 gcccgtcccatgatgtgatgttgctgaagccaaagctg 111760
>gb|BC009703.1| Homo sapiens SEC11-like 3 (S. cerevisiae), mRNA (cDNA clone MGC:9299 IMAGE:3895819), complete cds Length = 782 Score = 52.0 bits (26), Expect = 0.003 Identities = 62/74 (83%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 ||||||||| || || || | |||||| |||||||| || || || ||||| |||||||| Sbjct: 389 ttcatgaactttgattactctgtgaactattggaatgtctcgtccttcaactttaaaaac 330 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 329 aactatttcaccag 316
>dbj|D50641.1| Hordeum vulgare DNA for plant metallothionein-like protein, complete cds Length = 1819 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 19 taaaatatgtctatgtacatccatatatagttaatagt 56 |||||||||||||| ||||||| ||||||||| ||||| Sbjct: 401 taaaatatgtctatatacatccgtatatagttcatagt 438
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtattttc 102 |||||||||||| |||||||||||||||| Sbjct: 28337358 ttatatttaggatcggaggaagtattttc 28337330 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 15320576 ttatatttagggacggaggaagta 15320553 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtatttt 101 ||||||||||| ||||| |||||||||| Sbjct: 1210695 ttatatttagggacggatgaagtatttt 1210668
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 50.1 bits (25), Expect = 0.010 Identities = 77/93 (82%), Gaps = 1/93 (1%) Strand = Plus / Minus Query: 5 tgaatctatactnctaaaatatgtctatgtacatccatatatagttaatagtacaatctc 64 |||||||| ||| ||||| ||||||||| ||||||| ||| |||| |||| |||||| Sbjct: 6290 tgaatctacact-ctaaagtatgtctatatacatccgtatgtagtccttagtgaaatctc 6232 Query: 65 taaaatgttttatatttaggaacggaggaagta 97 ||||||| ||||||| |||||||||| |||| Sbjct: 6231 taaaatgacttatattatggaacggagggagta 6199
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12 Length = 157248 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtattttc 102 |||||||||||| |||||||||||||||| Sbjct: 62921 ttatatttaggatcggaggaagtattttc 62893
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||||||||| Sbjct: 43592 ttatatttaggaacggaggaagtat 43568
>gb|AC136138.30| Medicago truncatula clone mth2-8f9, complete sequence Length = 128267 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 |||||||||||||||||||||||| Sbjct: 80026 ttatatttaggaacggaggaagta 80049
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 |||||||||||||||||||||||| Sbjct: 13969008 ttatatttaggaacggaggaagta 13968985 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 66 aaaatgttttatatttaggaacggagg 92 ||||||| ||||||||||||||||||| Sbjct: 29946851 aaaatgtcttatatttaggaacggagg 29946825 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 73 tttatatttaggaacggaggaagtat 98 |||||||||||||||||||| ||||| Sbjct: 21121710 tttatatttaggaacggagggagtat 21121685 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 tttatatttaggaacggaggaagta 97 ||||||||| ||||||||||||||| Sbjct: 33315925 tttatattttggaacggaggaagta 33315901 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 taaaatgttttatatttaggaacggagg 92 |||||| | ||||||||||||||||||| Sbjct: 42091211 taaaatctcttatatttaggaacggagg 42091238 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 34696100 ttatatttagggacggaggaagta 34696123 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 tatttaggaacggaggaagtattt 100 ||||| |||||||||||||||||| Sbjct: 33320407 tattttggaacggaggaagtattt 33320384 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 22235680 ttatatttagggacggaggaagta 22235657
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 48.1 bits (24), Expect = 0.041 Identities = 45/52 (86%) Strand = Plus / Plus Query: 46 tagttaatagtacaatctctaaaatgttttatatttaggaacggaggaagta 97 ||||| ||||| ||||| ||||| || ||||||||||||||||||| |||| Sbjct: 61119 tagtttatagtgtaatctttaaaaggtcttatatttaggaacggagggagta 61170 Score = 44.1 bits (22), Expect = 0.64 Identities = 31/34 (91%) Strand = Plus / Minus Query: 65 taaaatgttttatatttaggaacggaggaagtat 98 ||||| || ||||||||||||||||||| ||||| Sbjct: 60970 taaaaggtgttatatttaggaacggagggagtat 60937 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 47303 ttatatttaggaacggagggagta 47280
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 |||||||||||||||||||||||| Sbjct: 129310 ttatatttaggaacggaggaagta 129287
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 |||||||||||||||||||||||| Sbjct: 44753 ttatatttaggaacggaggaagta 44730
>gb|AF182197.1|AF182197 Hordeum vulgare RNase S-like protein precursor (rsh1) gene, complete cds Length = 3758 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Plus Query: 18 ctaaaatatgtctatgtacatccatatatagt 49 ||||||||||||||| ||||||| |||||||| Sbjct: 2076 ctaaaatatgtctatatacatccgtatatagt 2107
>dbj|AP006146.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34M22, TM0282, complete sequence Length = 107979 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 |||||||||||||||||||||||| Sbjct: 62492 ttatatttaggaacggaggaagta 62469
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 46.1 bits (23), Expect = 0.16 Identities = 84/102 (82%), Gaps = 2/102 (1%) Strand = Plus / Plus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatccatatatagt-taatagtaca 59 |||||||||||| ||| |||||||||||||| ||||||| ||| |||| |||| | Sbjct: 12736 tgagtgaatctacactt-taaaatatgtctatatacatccgtatgtagtcctctagtgaa 12794 Query: 60 atctctaaaatgttttatatttaggaacggaggaagtatttt 101 |||||||||| | ||||||| |||||||||| |||||||| Sbjct: 12795 atctctaaaaagacttatattatggaacggagggagtatttt 12836 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 12692 ttatatttaggaacggagggagta 12669
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 59 aatctctaaaatgttttatatttaggaacggagga 93 ||||||||||| | ||||||||||||||| ||||| Sbjct: 177 aatctctaaaaggatttatatttaggaacagagga 211
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 76 atatttaggaacggaggaagtat 98 ||||||||||||||||||||||| Sbjct: 7987664 atatttaggaacggaggaagtat 7987642 Score = 40.1 bits (20), Expect = 10.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 66 aaaatgttttatatttaggaacggaggaagta 97 ||||| |||||||||| || |||||||||||| Sbjct: 26316232 aaaatcttttatattttgggacggaggaagta 26316201 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 20360096 ttatatttaggaacggagggagta 20360119
>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0480C01 Length = 151100 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 66 aaaatgttttatatttaggaacggagg 92 ||||||| ||||||||||||||||||| Sbjct: 91409 aaaatgtcttatatttaggaacggagg 91383
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtattt 100 ||||||||||||||||||| ||||||| Sbjct: 91821 ttatatttaggaacggagggagtattt 91847
>dbj|AP004559.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461A06 Length = 136384 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 76 atatttaggaacggaggaagtat 98 ||||||||||||||||||||||| Sbjct: 59834 atatttaggaacggaggaagtat 59812
>dbj|AP006536.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT05B16, TM0545, complete sequence Length = 66136 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 tatttaggaacggaggaagtatt 99 ||||||||||||||||||||||| Sbjct: 4624 tatttaggaacggaggaagtatt 4602
>dbj|AP004506.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03K03, TM0036a, complete sequence Length = 62624 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 69 atgttttatatttaggaacggaggaagtatt 99 |||| ||||||||||||||||||| |||||| Sbjct: 12135 atgtcttatatttaggaacggagggagtatt 12165
>dbj|AP004489.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04I02, TM0021, complete sequence Length = 83700 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 73 tttatatttaggaacggaggaagtatt 99 |||||||||||||||||||| |||||| Sbjct: 44571 tttatatttaggaacggagggagtatt 44545 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 44828 ttatatttaggaacggagggagta 44851
>dbj|AP004469.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT15D01, TM0004a, complete sequence Length = 92631 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 tatttaggaacggaggaagtatt 99 ||||||||||||||||||||||| Sbjct: 13124 tatttaggaacggaggaagtatt 13146
>ref|NM_025468.1| Mus musculus Sec11-like 3 (S. cerevisiae) (Sec11l3), mRNA Length = 771 Score = 44.1 bits (22), Expect = 0.64 Identities = 61/74 (82%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 |||||||||||| || || | |||||| || ||||| || | || ||||| |||||||| Sbjct: 393 ttcatgaaccttgattactctgtgaactatcggaatgtctcttccttcaaccttaaaaac 334 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 333 aactatttcaccag 320
>gb|AC120884.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017D19, complete sequence Length = 142015 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 62 ctctaaaatgttttatatttaggaacggaggaagtatt 99 ||||||||| |||||||||| || || ||||||||||| Sbjct: 64505 ctctaaaatcttttatattttgggacagaggaagtatt 64468
>gb|AC124578.4| Mus musculus BAC clone RP23-166C2 from 18, complete sequence Length = 213229 Score = 44.1 bits (22), Expect = 0.64 Identities = 61/74 (82%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 |||||||||||| || || | |||||| || ||||| || | || ||||| |||||||| Sbjct: 170269 ttcatgaaccttgattactctgtgaactatcggaatgtctcttccttcaaccttaaaaac 170210 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 170209 aactatttcaccag 170196
>gb|AC135604.29| Medicago truncatula clone mth2-32p10, complete sequence Length = 136735 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtatt 99 ||||| |||||||||||||||||||| Sbjct: 18602 ttataattaggaacggaggaagtatt 18627
>ref|NM_153628.1| Rattus norvegicus Sec11-like 3 (S. cerevisiae) (Sec11l3), mRNA Length = 679 Score = 44.1 bits (22), Expect = 0.64 Identities = 61/74 (82%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 |||||||||||| || || | |||||| || ||||| || | || ||||| |||||||| Sbjct: 401 ttcatgaaccttgattactctgtgaactatcggaatgtctcttccttcaactttaaaaac 342 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 341 aactatttcaccag 328
>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic sequence, complete sequence Length = 147289 Score = 44.1 bits (22), Expect = 0.64 Identities = 31/34 (91%) Strand = Plus / Plus Query: 66 aaaatgttttatatttaggaacggaggaagtatt 99 ||||| |||||||||||||||| |||| |||||| Sbjct: 75021 aaaatcttttatatttaggaacagagggagtatt 75054
>dbj|AK034936.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430064A07 product:SIGNAL PEPTIDASE 18 SUBUNIT (FRAGMENT) homolog [Bos taurus], full insert sequence Length = 2769 Score = 44.1 bits (22), Expect = 0.64 Identities = 61/74 (82%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 |||||||||||| || || | |||||| || ||||| || | || ||||| |||||||| Sbjct: 368 ttcatgaaccttgattactctgtgaactatcggaatgtctcttccttcaaccttaaaaac 309 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 308 aactatttcaccag 295
>dbj|AK007641.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810029G24 product:MICROSOMAL SIGNAL PEPTIDASE 21 KDA SUBUNIT (EC 3.4.-.-) (SPASE 21 KDA SUBUNIT) (SPC21) homolog [Rattus norvegicus], full insert sequence Length = 771 Score = 44.1 bits (22), Expect = 0.64 Identities = 61/74 (82%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 |||||||||||| || || | |||||| || ||||| || | || ||||| |||||||| Sbjct: 393 ttcatgaaccttgattactctgtgaactatcggaatgtctcttccttcaaccttaaaaac 334 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 333 aactatttcaccag 320
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagta 97 |||||||||||||||||||||| Sbjct: 5468 atatttaggaacggaggaagta 5489 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 5256 ttatatttaggaacggagggagta 5233 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 5179 ttatatttaggaacggagggagta 5156
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 62 ctctaaaatgttttatatttaggaacggaggaagtatt 99 ||||||||| |||||||||| || || ||||||||||| Sbjct: 22633719 ctctaaaatcttttatattttgggacagaggaagtatt 22633682 Score = 44.1 bits (22), Expect = 0.64 Identities = 31/34 (91%) Strand = Plus / Minus Query: 66 aaaatgttttatatttaggaacggaggaagtatt 99 ||||| |||||||||||||||| |||| |||||| Sbjct: 6469209 aaaatcttttatatttaggaacagagggagtatt 6469176 Score = 40.1 bits (20), Expect = 10.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 66 aaaatgttttatatttaggaacggaggaagta 97 ||||| ||||||||||||| ||||||| |||| Sbjct: 27544733 aaaatcttttatatttagggacggagggagta 27544764 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 |||||||| ||||||||||||||| Sbjct: 20407025 ttatattttggaacggaggaagta 20407048
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 73 tttatatttaggaacggaggaagtat 98 |||||||||||||||||||| ||||| Sbjct: 89255 tttatatttaggaacggagggagtat 89230
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 73 tttatatttaggaacggaggaagtat 98 |||||||||||||||||||| ||||| Sbjct: 19219 tttatatttaggaacggagggagtat 19194
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtatt 99 ||||||||||||||||||| |||||| Sbjct: 2923 ttatatttaggaacggagggagtatt 2948
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 44.1 bits (22), Expect = 0.64 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacat 38 |||||||||||| ||| ||||||||||||||| ||||| Sbjct: 2337 tgagtgaatctacact-ctaaaatatgtctatatacat 2301
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 44.1 bits (22), Expect = 0.64 Identities = 61/74 (82%) Strand = Plus / Plus Query: 24 tatgtctatgtacatccatatatagttaatagtacaatctctaaaatgttttatatttag 83 ||||||||| ||||||| ||| |||| ||||| ||| || |||| | |||||||||| Sbjct: 3587 tatgtctatatacatccgtatgtagtccatagtggaatgtcgaaaaagacttatatttag 3646 Query: 84 gaacggaggaagta 97 ||||||||| |||| Sbjct: 3647 gaacggagggagta 3660
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 44.1 bits (22), Expect = 0.64 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 5 tgaatctatactnctaaaatatgtctatgtacatccatatatagt 49 |||||||||||| |||||||||||||| ||||||| ||| |||| Sbjct: 3840 tgaatctatactt-taaaatatgtctatatacatccgtatgtagt 3797
>gb|AY610341.1| Sus scrofa clone rebs19c_j12.y1.abd, mRNA sequence Length = 663 Score = 44.1 bits (22), Expect = 0.64 Identities = 61/74 (82%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 ||||||||| || || || | |||||| |||||||| || || || ||||| |||||||| Sbjct: 385 ttcatgaactttgattactctgtgaactattggaatgtctcgtccttcaactttaaaaac 326 Query: 644 aactatttctccag 657 ||| ||||| |||| Sbjct: 325 aacaatttcaccag 312
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 62 ctctaaaatgttttatatttaggaacggaggaagtatt 99 ||||||||| |||||||||| || || ||||||||||| Sbjct: 22943630 ctctaaaatcttttatattttgggacagaggaagtatt 22943593 Score = 44.1 bits (22), Expect = 0.64 Identities = 31/34 (91%) Strand = Plus / Minus Query: 66 aaaatgttttatatttaggaacggaggaagtatt 99 ||||| |||||||||||||||| |||| |||||| Sbjct: 6535676 aaaatcttttatatttaggaacagagggagtatt 6535643 Score = 40.1 bits (20), Expect = 10.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 66 aaaatgttttatatttaggaacggaggaagta 97 ||||| ||||||||||||| ||||||| |||| Sbjct: 27568721 aaaatcttttatatttagggacggagggagta 27568752 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 |||||||| ||||||||||||||| Sbjct: 20717259 ttatattttggaacggaggaagta 20717282
>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene, complete cds Length = 5238 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagta 97 |||||||||||||||||||||| Sbjct: 4107 atatttaggaacggaggaagta 4128
>gb|BC037187.1| Mus musculus Sec11-like 3 (S. cerevisiae), mRNA (cDNA clone MGC:47104 IMAGE:3666130), complete cds Length = 829 Score = 44.1 bits (22), Expect = 0.64 Identities = 61/74 (82%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 |||||||||||| || || | |||||| || ||||| || | || ||||| |||||||| Sbjct: 435 ttcatgaaccttgattactctgtgaactatcggaatgtctcttccttcaaccttaaaaac 376 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 375 aactatttcaccag 362
>dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT41F23, TM0382, complete sequence Length = 99748 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtatt 99 ||||||||||||||||||| |||||| Sbjct: 4762 ttatatttaggaacggagggagtatt 4787 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 4500 ttatatttaggaacggagggagta 4477
>dbj|AP006381.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09G09, TM0234, complete sequence Length = 105887 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtatt 99 ||||||||||||||||||| |||||| Sbjct: 26346 ttatatttaggaacggagggagtatt 26321
>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b, complete sequence Length = 69411 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtatt 99 ||||||||||||||||||| |||||| Sbjct: 44091 ttatatttaggaacggagggagtatt 44066
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtatt 99 ||||||||||||||||||| |||||| Sbjct: 69547 ttatatttaggaacggagggagtatt 69522
>dbj|AB022714.2| Rattus norvegicus mRNA for signal peptidase 21kDa subunit, complete cds Length = 679 Score = 44.1 bits (22), Expect = 0.64 Identities = 61/74 (82%) Strand = Plus / Minus Query: 584 ttcatgaaccttaatcacacggtgaacaattggaatttcacgaccatcaacattaaaaac 643 |||||||||||| || || | |||||| || ||||| || | || ||||| |||||||| Sbjct: 401 ttcatgaaccttgattactctgtgaactatcggaatgtctcttccttcaactttaaaaac 342 Query: 644 aactatttctccag 657 ||||||||| |||| Sbjct: 341 aactatttcaccag 328
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||| ||||| Sbjct: 57367 ttatatttaggaacggagggagtat 57343 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 52451 ttatatttaggaacggagggagta 52474
>gb|AC135927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B02, complete sequence Length = 146435 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 atatttaggaacggaggaagtattt 100 ||||||||||||||||| ||||||| Sbjct: 33520 atatttaggaacggagggagtattt 33496
>gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0686B10, complete sequence Length = 159672 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 atatttaggaacggaggaagtattt 100 ||||||||||||||||| ||||||| Sbjct: 84779 atatttaggaacggagggagtattt 84755
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||| ||||| Sbjct: 26826 ttatatttaggaacggagggagtat 26802
>gb|DQ201157.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome 2 (Cry2) gene, partial cds; and stowaway MITE, complete sequence Length = 2686 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtattttc 102 ||||||||||||||||||| |||| |||| Sbjct: 1800 ttatatttaggaacggagggagtagtttc 1828
>gb|AC165366.2| Mus musculus BAC clone RP23-51H15 from chromosome 13, complete sequence Length = 241514 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 560 tcaacttcagcactttccttg 580 ||||||||||||||||||||| Sbjct: 161846 tcaacttcagcactttccttg 161826
>emb|CR955005.2| Medicago truncatula chromosome 5 clone mte1-58c24, COMPLETE SEQUENCE Length = 106497 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 61 tctctaaaatgttttatatttaggaacggaggaagta 97 |||| ||||||||||||| ||||| ||||||| |||| Sbjct: 8924 tctcaaaaatgttttataattagggacggaggtagta 8888
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||| ||||| Sbjct: 54080 ttatatttaggaacggagggagtat 54104
>gb|AC117252.3| Mus musculus BAC clone RP24-381C17 from chromosome 6, complete sequence Length = 129945 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 aaaatgcaactaaaacttaattaca 129 |||||| |||||||||||||||||| Sbjct: 128881 aaaatgaaactaaaacttaattaca 128857
>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence Length = 112369 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 tttatatttaggaacggaggaagta 97 |||||||||||||||||||| |||| Sbjct: 16845 tttatatttaggaacggagggagta 16869
>gb|AC114408.18| Mus musculus chromosome 5, clone RP23-51J22, complete sequence Length = 230044 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 aaaatgttttatatttaggaa 86 ||||||||||||||||||||| Sbjct: 153481 aaaatgttttatatttaggaa 153501
>gb|AC136451.9| Medicago truncatula clone mth2-17d19, complete sequence Length = 132473 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 61 tctctaaaatgttttatatttaggaacggaggaagta 97 |||| ||||||||||||| ||||| ||||||| |||| Sbjct: 3110 tctcaaaaatgttttataattagggacggaggtagta 3146
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||| ||||| Sbjct: 2332 ttatatttaggaacggagggagtat 2356
>gb|AC148343.2| Medicago truncatula chromosome 7 BAC clone mth2-70c24, complete sequence Length = 87311 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtat 98 |||||||||| |||||||||||||| Sbjct: 25757 ttatatttagaaacggaggaagtat 25733
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtat 98 |||||||| |||||||||||||||| Sbjct: 7225912 ttatattttggaacggaggaagtat 7225936 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ttatatttaggaacggagga 93 |||||||||||||||||||| Sbjct: 30819960 ttatatttaggaacggagga 30819941 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagtatt 99 |||||||| ||||||||||||||| Sbjct: 29822934 atatttagaaacggaggaagtatt 29822957 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 atatttaggaacggaggaagtatt 99 ||||||||| |||||||||||||| Sbjct: 331353 atatttagggacggaggaagtatt 331330
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tatttaggaacggaggaagta 97 ||||||||||||||||||||| Sbjct: 6768789 tatttaggaacggaggaagta 6768809 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagtatt 99 ||||||||||||||||| |||||| Sbjct: 8468734 atatttaggaacggagggagtatt 8468757 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtatttt 101 ||||||||||| ||||||| |||||||| Sbjct: 7283153 ttatatttagggacggagggagtatttt 7283126 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagtatt 99 ||||||| |||||||||||||||| Sbjct: 2128284 atatttatgaacggaggaagtatt 2128307
>gb|AC155649.4| Mus musculus 6 BAC RP24-234M19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 152831 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 105 aaaatgcaactaaaacttaattaca 129 |||||| |||||||||||||||||| Sbjct: 102119 aaaatgaaactaaaacttaattaca 102143
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 66 aaaatgttttatatttaggaacggaggaagtat 98 ||||| ||||||||||||| ||||||| ||||| Sbjct: 67155 aaaattttttatatttagggacggagggagtat 67187
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1070A12 Length = 148449 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 tttatatttaggaacggaggaagta 97 ||||||||| ||||||||||||||| Sbjct: 109172 tttatattttggaacggaggaagta 109148 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 tatttaggaacggaggaagtattt 100 ||||| |||||||||||||||||| Sbjct: 113654 tattttggaacggaggaagtattt 113631
>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0009H10 Length = 175754 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 atatttaggaacggaggaagtattt 100 |||||||| |||||||||||||||| Sbjct: 121959 atatttagaaacggaggaagtattt 121935
>dbj|AP006464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1054C11 Length = 141529 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tatttaggaacggaggaagta 97 ||||||||||||||||||||| Sbjct: 60126 tatttaggaacggaggaagta 60146
>emb|AJ459252.1|TAE459252 Triticum aestivum TAA1b gene for fatty acyl coA reductase Length = 4308 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 5 tgaatctatactnctaaaatatgtctatgtacatccatat 44 |||||||||| | |||||||||||||| ||||||||||| Sbjct: 1041 tgaatctata-ttctaaaatatgtctacatacatccatat 1079 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 1111 ttatatttaggaacggagggagta 1134
>dbj|AK102081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082K10, full insert sequence Length = 2083 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 tttatatttaggaacggaggaagta 97 ||||||||| ||||||||||||||| Sbjct: 1842 tttatattttggaacggaggaagta 1818
>emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035O13, complete sequence Length = 143298 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtat 98 |||||||| |||||||||||||||| Sbjct: 89649 ttatattttggaacggaggaagtat 89673
>dbj|AP006677.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT46E19, TM0371b, complete sequence Length = 67552 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtattttc 102 |||||| ||||||||||||||||| |||| Sbjct: 42650 ttatatataggaacggaggaagtagtttc 42622
>dbj|AP006410.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301a, complete sequence Length = 28124 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||| ||||| Sbjct: 27399 ttatatttaggaacggagggagtat 27423
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||| ||||| Sbjct: 40796 ttatatttaggaacggagggagtat 40820 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 40533 ttatatttaggaacggagggagta 40510
>dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L07, TM0254, complete sequence Length = 118592 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||| ||||| Sbjct: 57056 ttatatttaggaacggagggagtat 57032 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 68726 ttatatttaggaacggagggagta 68703
>dbj|AP004940.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT48I11, TM0106, complete sequence Length = 103636 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||| ||||| Sbjct: 23873 ttatatttaggaacggagggagtat 23897 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||| ||||| Sbjct: 23610 ttatatttaggaacggagggagtat 23586
>dbj|AP004488.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02F05, TM0020, complete sequence Length = 80920 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||| ||||||||||||||||| Sbjct: 22682 ttatattaaggaacggaggaagtat 22658
>emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on chromosome 11, complete sequence Length = 149561 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 gatgctgctgaagccacagct 500 ||||||||||||||||||||| Sbjct: 64988 gatgctgctgaagccacagct 65008
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagtat 98 ||||||||||||||||||| ||||| Sbjct: 7541 ttatatttaggaacggagggagtat 7565
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 632 aacattaaaaacaactattt 651 |||||||||||||||||||| Sbjct: 570299 aacattaaaaacaactattt 570318
>ref|NM_001002682.1| Danio rerio calsequestrin 2 (casq2), mRNA Length = 2803 Score = 40.1 bits (20), Expect = 10.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 107 aatgcaactaaaacttaattacatttattcaa 138 |||||| ||||||| |||||||||||||||| Sbjct: 2091 aatgcacctaaaacaaaattacatttattcaa 2122
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 148701 ttatatttaggaacggagggagta 148724
>gb|DQ214694.1| Taeniopygia guttata clone 0058P0007H08 21 kDa signal peptidase subunit variant 1-like mRNA, complete sequence Length = 715 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 630 tcaacattaaaaacaactatttctccag 657 ||||| ||||||||||||||||| |||| Sbjct: 295 tcaactttaaaaacaactatttcaccag 268
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 10.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 59 aatctctaaaatgttttatatttaggaacgga 90 ||||||||||| | ||||||||||||||||| Sbjct: 260196 aatctctaaaaagacttatatttaggaacgga 260165
>gb|AC148822.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0036K13 map near R3342S, complete sequence Length = 135684 Score = 40.1 bits (20), Expect = 10.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 66 aaaatgttttatatttaggaacggaggaagta 97 ||||| ||||||||||||| ||||||| |||| Sbjct: 80860 aaaatcttttatatttagggacggagggagta 80891
>gb|AC150635.4| Bos taurus BAC CH240-448P19 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 151766 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 554 aggatgtcaacttcagcactttcc 577 |||||||||||||||||| ||||| Sbjct: 101321 aggatgtcaacttcagcattttcc 101298
>ref|XM_424458.1| PREDICTED: Gallus gallus similar to Microsomal signal peptidase 21 kDa subunit (SPase 21 kDa subunit) (SPC21) (LOC426850), mRNA Length = 772 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 630 tcaacattaaaaacaactatttctccag 657 ||||| ||||||||||||||||| |||| Sbjct: 331 tcaaccttaaaaacaactatttcaccag 304
>ref|XM_421653.1| PREDICTED: Gallus gallus similar to FLJ00156 protein (LOC423781), mRNA Length = 9098 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 tacatgaaagcttccattca 265 |||||||||||||||||||| Sbjct: 6311 tacatgaaagcttccattca 6330
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 29545 ttatatttagggacggaggaagta 29568
>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1b) pseudogene, complete sequence Length = 1147 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 417 ttatatttaggaacggagggagta 440
>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1a) pseudogene, complete sequence Length = 1112 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 840 ttatatttaggaacggagggagta 817
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 32714362 ttatatttagggacggaggaagta 32714339
>emb|AL935124.31| Mouse DNA sequence from clone RP23-88C15 on chromosome 2, complete sequence Length = 193805 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 aggaacggaggaagtatttt 101 |||||||||||||||||||| Sbjct: 43988 aggaacggaggaagtatttt 43969
>emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8, COMPLETE SEQUENCE Length = 114811 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 99816 ttatatttaggaacggagggagta 99793
>emb|CR962126.1| Medicago truncatula chromosome 5 clone mth2-143k7, COMPLETE SEQUENCE Length = 117577 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 |||||||| ||||||||||||||| Sbjct: 67330 ttatattttggaacggaggaagta 67353
>gb|AC137693.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1111_B01, complete sequence Length = 136068 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 |||||||| ||||||||||||||| Sbjct: 84214 ttatattttggaacggaggaagta 84191
>gb|AC128660.31| Medicago truncatula clone mth2-14p23, complete sequence Length = 99170 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 20668 ttatatttaggaacggaggtagta 20645
>gb|AC137836.25| Medicago truncatula clone mth2-10f14, complete sequence Length = 140197 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 |||||||||||| ||||||||||| Sbjct: 132350 ttatatttaggaccggaggaagta 132373
>gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence Length = 257036 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 aaaacttaattacatttatt 135 |||||||||||||||||||| Sbjct: 129120 aaaacttaattacatttatt 129139
>emb|AL691459.25| Human DNA sequence from clone RP11-543D5 on chromosome 1 Contains four novel genes and a CpG island, complete sequence Length = 139890 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aattacatttattcaatgca 142 |||||||||||||||||||| Sbjct: 46119 aattacatttattcaatgca 46100
>emb|AL596329.5| Human DNA sequence from clone RP11-179D6 on chromosome 13, complete sequence Length = 85563 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ccatatatagttaatagtac 58 |||||||||||||||||||| Sbjct: 27693 ccatatatagttaatagtac 27674
>gb|DQ366724.1| Uncultured Prochlorococcus marinus clone HF10-11H7 genomic sequence Length = 34000 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 aacattaaaaacaactattt 651 |||||||||||||||||||| Sbjct: 25713 aacattaaaaacaactattt 25694
>emb|AL365364.19| Human DNA sequence from clone RP11-624L12 on chromosome 10 Contains a ribosomal protein L17 (RPL17) pseudogene and the 3'end of the FER1L3 gene for fer-1-like 3, myoferlin (C. elegans), complete sequence Length = 173864 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 626 accatcaacattaaaaacaactat 649 ||||||||||||| |||||||||| Sbjct: 105731 accatcaacattagaaacaactat 105708
>emb|AL354831.18| Human DNA sequence from clone RP11-188A23 on chromosome 13 Contains a novel gene and a CpG island, complete sequence Length = 144586 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 636 ttaaaaacaactatttctcc 655 |||||||||||||||||||| Sbjct: 95672 ttaaaaacaactatttctcc 95691
>gb|BT009538.1| Triticum aestivum clone wr1.pk0144.b10:fis, full insert mRNA sequence Length = 2748 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 tttatatttaggaacggagg 92 |||||||||||||||||||| Sbjct: 2402 tttatatttaggaacggagg 2421
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 23297 ttatatttaggaacggagggagta 23274
>emb|X77688.1|SCPRP21 S.cerevisiae PRP21, SPP91, CDC6, NUC1, CRY2 and S24 genes Length = 36017 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 688 aaacaggatatcaccccttt 707 |||||||||||||||||||| Sbjct: 33911 aaacaggatatcaccccttt 33892
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ttatatttaggaacggagga 93 |||||||||||||||||||| Sbjct: 87482 ttatatttaggaacggagga 87463
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15, complete sequence Length = 144778 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 atatttaggaacggaggaagtatt 99 ||||||||| |||||||||||||| Sbjct: 127173 atatttagggacggaggaagtatt 127150
>gb|AC090870.13| Oryza sativa chromosome 10 BAC OSJNBb0015K05 genomic sequence, complete sequence Length = 123292 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagtatt 99 ||||||||| |||||||||||||| Sbjct: 48089 atatttagggacggaggaagtatt 48112
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagtatt 99 ||||||||| |||||||||||||| Sbjct: 131736 atatttagggacggaggaagtatt 131759
>gb|AC022276.35| Homo sapiens 12 BAC RP11-161A14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177505 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 ggttatcaccagcagacccagcgc 384 ||||||||||| |||||||||||| Sbjct: 109976 ggttatcaccatcagacccagcgc 109999
>emb|AL928632.13| Mouse DNA sequence from clone RP23-303M15 on chromosome 2, complete sequence Length = 217309 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 ttcagctctcacttacttct 302 |||||||||||||||||||| Sbjct: 126376 ttcagctctcacttacttct 126395
>gb|AC151529.20| Medicago truncatula clone mth2-7n23, complete sequence Length = 134908 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 tatatttaggaacggaggaagtat 98 |||||||||||||||||| ||||| Sbjct: 56707 tatatttaggaacggaggtagtat 56684
>gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 |||||||| ||||||||||||||| Sbjct: 29182 ttatattttggaacggaggaagta 29159
>gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 |||||||| ||||||||||||||| Sbjct: 29182 ttatattttggaacggaggaagta 29159
>emb|CR353329.2| Gallus gallus finished cDNA, clone ChEST280c17 Length = 771 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 630 tcaacattaaaaacaactatttctccag 657 ||||| ||||||||||||||||| |||| Sbjct: 331 tcaaccttaaaaacaactatttcaccag 304
>gb|AF277239.1|AF277239 Heteranthelium piliferum isolate H5557 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1293 Score = 40.1 bits (20), Expect = 10.0 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Minus Query: 1 tgagtgaatctatactnctaaaatatgtctatgtacatcc 40 ||||| |||||| ||| ||||||||||||||| ||||||| Sbjct: 1013 tgagttaatctacact-ctaaaatatgtctatatacatcc 975
>gb|AC013447.4|AC013447 Homo sapiens BAC clone RP11-543D5 from 1, complete sequence Length = 166143 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aattacatttattcaatgca 142 |||||||||||||||||||| Sbjct: 71971 aattacatttattcaatgca 71952
>emb|BX935949.2| Gallus gallus finished cDNA, clone ChEST437a5 Length = 939 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 630 tcaacattaaaaacaactatttctccag 657 ||||| ||||||||||||||||| |||| Sbjct: 498 tcaaccttaaaaacaactatttcaccag 471
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagtatt 99 ||||||||||| |||||||||||| Sbjct: 26317318 atatttaggaaaggaggaagtatt 26317341 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 |||||||| ||||||||||||||| Sbjct: 26277304 ttatattttggaacggaggaagta 26277281 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 10796296 ttatatttagggacggaggaagta 10796273
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 atatttaggaacggaggaagtatt 99 ||||||||| |||||||||||||| Sbjct: 18946952 atatttagggacggaggaagtatt 18946929
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 32804872 ttatatttagggacggaggaagta 32804849
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 8700 ttatatttaggaacggagggagta 8723 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 8590 ttatatttaggaacggagggagta 8567
>emb|BX950629.1| Gallus gallus finished cDNA, clone ChEST370o18 Length = 780 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 630 tcaacattaaaaacaactatttctccag 657 ||||| ||||||||||||||||| |||| Sbjct: 338 tcaaccttaaaaacaactatttcaccag 311
>gb|BC075775.1| Danio rerio calsequestrin 2, mRNA (cDNA clone MGC:86817 IMAGE:6901506), complete cds Length = 2803 Score = 40.1 bits (20), Expect = 10.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 107 aatgcaactaaaacttaattacatttattcaa 138 |||||| ||||||| |||||||||||||||| Sbjct: 2091 aatgcacctaaaacaaaattacatttattcaa 2122
>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 taaaatgttttatatttaggaacggagg 92 |||||| | ||||||||||||||||||| Sbjct: 78016 taaaatctcttatatttaggaacggagg 78043
>dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1148D12 Length = 132060 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 11340 ttatatttagggacggaggaagta 11363
>emb|BX935228.1| Gallus gallus finished cDNA, clone ChEST956e2 Length = 743 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 630 tcaacattaaaaacaactatttctccag 657 ||||| ||||||||||||||||| |||| Sbjct: 304 tcaaccttaaaaacaactatttcaccag 277
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 148117 ttatatttagggacggaggaagta 148140
>emb|BX932058.1| Gallus gallus finished cDNA, clone ChEST409m2 Length = 765 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 630 tcaacattaaaaacaactatttctccag 657 ||||| ||||||||||||||||| |||| Sbjct: 325 tcaaccttaaaaacaactatttcaccag 298
>gb|AE014847.1| Plasmodium falciparum 3D7 chromosome 12, section 4 of 9 of the complete sequence Length = 252650 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 aatgttttatatttaggaac 87 |||||||||||||||||||| Sbjct: 29251 aatgttttatatttaggaac 29232
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 529 ttatatttaggaacggagggagta 552
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 393 ttatatttaggaacggagggagta 416
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 27575 ttatatttagggacggaggaagta 27552
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 tatatttaggaacggaggaagtat 98 |||||||||| ||||||||||||| Sbjct: 11560 tatatttagggacggaggaagtat 11537
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 tatatttaggaacggaggaagtat 98 |||||||||| ||||||||||||| Sbjct: 166938 tatatttagggacggaggaagtat 166915
>dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1068H08 Length = 152794 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ttatatttaggaacggagga 93 |||||||||||||||||||| Sbjct: 39183 ttatatttaggaacggagga 39164
>dbj|AP003310.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F12 Length = 137716 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 18159 ttatatttagggacggaggaagta 18136
>dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0062A09 Length = 173541 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtatttt 101 ||||||||||| ||||||| |||||||| Sbjct: 17116 ttatatttagggacggagggagtatttt 17089
>dbj|AP005926.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054E15 Length = 142898 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagtatt 99 ||||||||||||||||| |||||| Sbjct: 94083 atatttaggaacggagggagtatt 94106
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 107844 ttatatttaggaacggagggagta 107867
>dbj|AP005165.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0057M23 Length = 168029 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagtatttt 101 ||||||||||| ||||| |||||||||| Sbjct: 112302 ttatatttagggacggatgaagtatttt 112275
>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0475E07 Length = 139961 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 106589 ttatatttagggacggaggaagta 106566
>dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1610_C11 Length = 104553 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagtatt 99 ||||||| |||||||||||||||| Sbjct: 53701 atatttatgaacggaggaagtatt 53724
>emb|BX248385.6| Zebrafish DNA sequence from clone CH211-229N2 in linkage group 8, complete sequence Length = 125523 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 aaaacttaattacatttattcaat 139 ||||||||| |||||||||||||| Sbjct: 14882 aaaacttaaatacatttattcaat 14859
>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1643_A10 Length = 130037 Score = 40.1 bits (20), Expect = 10.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 ctaaaatgttttatatttaggaacggaggaagtatt 99 ||||||| | ||||||| ||||||||||||||||| Sbjct: 108696 ctaaaatttcttatattctggaacggaggaagtatt 108731
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 162755 ttatatttaggaacggagggagta 162732
>emb|AL807237.17| Mouse DNA sequence from clone RP23-384O9 on chromosome X, complete sequence Length = 162709 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 tctaaaatgttttatattta 82 |||||||||||||||||||| Sbjct: 114275 tctaaaatgttttatattta 114294
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 40.1 bits (20), Expect = 10.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 66 aaaatgttttatatttaggaacggaggaagta 97 ||||| |||||||||| || |||||||||||| Sbjct: 45813 aaaatcttttatattttgggacggaggaagta 45782
>emb|Z49466.1|SCYJL191W S.cerevisiae chromosome X reading frame ORF YJL191w Length = 1495 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 688 aaacaggatatcaccccttt 707 |||||||||||||||||||| Sbjct: 409 aaacaggatatcaccccttt 390
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 228 ttatatttaggaacggagggagta 251
>emb|CR974428.13| Mouse DNA sequence from clone RP23-114O7 on chromosome 12, complete sequence Length = 197806 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 aaaacttaattacatttatt 135 |||||||||||||||||||| Sbjct: 193768 aaaacttaattacatttatt 193749
>emb|BX511259.14| Zebrafish DNA sequence from clone CH211-125E6 in linkage group 9, complete sequence Length = 182412 Score = 40.1 bits (20), Expect = 10.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 107 aatgcaactaaaacttaattacatttattcaa 138 |||||| ||||||| |||||||||||||||| Sbjct: 45885 aatgcacctaaaacaaaattacatttattcaa 45854
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 atatttaggaacggaggaagtatt 99 ||||||||| |||||||||||||| Sbjct: 18958182 atatttagggacggaggaagtatt 18958159
>gb|AC174474.1| Pan troglodytes chromosome X clone CH251-58H10 map human ortholog p11.4, complete sequence Length = 159881 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tctaaaatgttttatattta 82 |||||||||||||||||||| Sbjct: 105904 tctaaaatgttttatattta 105885
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagtatt 99 ||||||||||| |||||||||||| Sbjct: 26245487 atatttaggaaaggaggaagtatt 26245510 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 |||||||| ||||||||||||||| Sbjct: 26205480 ttatattttggaacggaggaagta 26205457 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 10795995 ttatatttagggacggaggaagta 10795972
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagtatt 99 |||||||| ||||||||||||||| Sbjct: 103860 atatttagaaacggaggaagtatt 103883
>emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004G23, complete sequence Length = 115972 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 atatttaggaacggaggaagtatt 99 ||||||||| |||||||||||||| Sbjct: 16013 atatttagggacggaggaagtatt 15990
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagtatt 99 ||||||||||| |||||||||||| Sbjct: 81302 atatttaggaaaggaggaagtatt 81325 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 |||||||| ||||||||||||||| Sbjct: 41288 ttatattttggaacggaggaagta 41265
>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131689 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 atatttaggaacggaggaagtatt 99 ||||||||||| |||||||||||| Sbjct: 31591 atatttaggaaaggaggaagtatt 31614
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 119388 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||| |||||||||||| Sbjct: 62645 ttatatttagggacggaggaagta 62622
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 2157 ttatatttaggaacggagggagta 2180
>gb|AC151735.3| Mus musculus BAC clone RP23-24D16 from 9, complete sequence Length = 201762 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tgctgctgaagccacagctg 501 |||||||||||||||||||| Sbjct: 94840 tgctgctgaagccacagctg 94821
>emb|CT033769.2| Medicago truncatula chromosome 5 clone mte1-54l11, COMPLETE SEQUENCE Length = 127487 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 |||||||| ||||||||||||||| Sbjct: 73653 ttatattttggaacggaggaagta 73630
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 40.1 bits (20), Expect = 10.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 59 aatctctaaaatgttttatatttaggaacggaggaagtat 98 ||||||||||| || |||||||||| | |||||| ||||| Sbjct: 2219 aatctctaaaaggtcttatatttagaagcggagggagtat 2180
>dbj|AP006699.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01N23, TM0490, complete sequence Length = 110636 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 tatttaggaacggaggaagtattt 100 |||||||||||||||| ||||||| Sbjct: 42250 tatttaggaacggagggagtattt 42227
>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399, complete sequence Length = 94919 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 78636 ttatatttaggaacggagggagta 78659
>dbj|AP006356.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT06I08, TM0082b, complete sequence Length = 93398 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 25847 ttatatttaggaacggagggagta 25824
>dbj|AP006124.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT15N01, TM0209, complete sequence Length = 104684 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||| |||||||||||||||||| Sbjct: 97136 ttataattaggaacggaggaagta 97113
>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b, complete sequence Length = 66866 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 3276 ttatatttaggaacggagggagta 3299
>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139, complete sequence Length = 106089 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 12743 ttatatttaggaacggagggagta 12766
>dbj|AP004543.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08G20, TM0102b, complete sequence Length = 38490 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 37282 ttatatttaggaacggagggagta 37259
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001, complete sequence Length = 103397 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttatatttaggaacggaggaagta 97 ||||||||||||||||||| |||| Sbjct: 30602 ttatatttaggaacggagggagta 30579
>gb|AC140392.3| Mus musculus BAC clone RP24-89F9 from chromosome 9, complete sequence Length = 225973 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 tgctgctgaagccacagctg 501 |||||||||||||||||||| Sbjct: 217054 tgctgctgaagccacagctg 217035
>gb|AC171728.1| Lycopersicon esculentum chromosome 01 clone C01HBa0216G16, complete sequence Length = 196870 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ctacaagaccaaactacgac 328 |||||||||||||||||||| Sbjct: 28373 ctacaagaccaaactacgac 28354
>emb|AL626806.14| Mouse DNA sequence from clone RP23-146I18 on chromosome 4, complete sequence Length = 165969 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 aaaacttaattacatttatt 135 |||||||||||||||||||| Sbjct: 6597 aaaacttaattacatttatt 6578
>emb|AL121578.1|HSXKSRPXR Homo sapiens chromosome X sequence from 12 cosmids, map Xp21.1 region DXS709-SRPX, complete sequence Length = 337101 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tctaaaatgttttatattta 82 |||||||||||||||||||| Sbjct: 256500 tctaaaatgttttatattta 256481
>gb|L12564.1|YSCRPCRYII Saccharomyces cerevisiae ribosomal protein 59 (CRY2) gene, complete cds Length = 1586 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 688 aaacaggatatcaccccttt 707 |||||||||||||||||||| Sbjct: 621 aaacaggatatcaccccttt 602 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,522,046 Number of Sequences: 3902068 Number of extensions: 6522046 Number of successful extensions: 134371 Number of sequences better than 10.0: 236 Number of HSP's better than 10.0 without gapping: 260 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 131200 Number of HSP's gapped (non-prelim): 3136 length of query: 728 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 705 effective length of database: 17,143,297,704 effective search space: 12086024881320 effective search space used: 12086024881320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)