ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197772.1| Oryza sativa (japonica cultivar-group) putative... 285 9e-74
2gb|BT018439.1| Zea mays clone EL01N0372H05.d mRNA sequence 196 7e-47
3gb|AY104046.1| Zea mays PCO084385 mRNA sequence 196 7e-47
4gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 147 5e-32
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 147 5e-32
7dbj|AK139061.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 46 0.15
8dbj|AK015617.1| Mus musculus adult male testis cDNA, RIKEN full-... 46 0.15
9gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, comp... 46 0.15
10ref|NM_029144.1| Mus musculus RIKEN cDNA 4930503B20 gene (493050... 46 0.15
11ref|NM_197080.1| Oryza sativa (japonica cultivar-group) hypothet... 44 0.58
12gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 gen... 44 0.58
13gb|AC010206.8|AC010206 Homo sapiens 12 BAC RP11-13G14 (Roswell P... 44 0.58
14gb|AC167171.2| Mus musculus BAC clone RP23-409H8 from chromosome... 42 2.3
15gb|AC124926.7| Rattus norvegicus X BAC CH230-155H3 (Children's H... 42 2.3
16emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 42 2.3
17emb|Z93377.1|CEF13A7 Caenorhabditis elegans Cosmid F13A7, comple... 42 2.3
18gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
19gb|AC136228.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
20gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 9.1
21gb|AC158487.2| Capitella capitata clone JGIAUTO-1A15, complete s... 40 9.1
22ref|XM_749567.1| Aspergillus fumigatus Af293 t-complex protein 1... 40 9.1
23gb|AC011288.4| Homo sapiens BAC clone RP11-27B1 from 7, complete... 40 9.1
24emb|AL929355.1|PFA929355 Plasmodium falciparum strain 3D7, chrom... 40 9.1
25emb|BX901956.4| Zebrafish DNA sequence from clone CH211-284C12 i... 40 9.1
26gb|AC155834.6| Mus musculus 10 BAC RP24-93K4 (Roswell Park Cance... 40 9.1
27gb|AC020895.8| Homo sapiens chromosome 19 clone CTC-312O10, comp... 40 9.1
28gb|AC153876.8| Mus musculus 10 BAC RP23-218D7 (Roswell Park Canc... 40 9.1
29dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
30dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
32gb|DQ217942.1| Homo sapiens EGF-like module containing mucin-lik... 40 9.1
33gb|AC016970.16| Homo sapiens 3 BAC RP11-40M23 (Roswell Park Canc... 40 9.1
34emb|BX005484.7| Zebrafish DNA sequence from clone DKEY-25G12, co... 40 9.1
35dbj|AP005745.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
36emb|AL954713.11| Mouse DNA sequence from clone RP23-463K8 on chr... 40 9.1
37gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
38emb|AL935200.9| Zebrafish DNA sequence from clone CH211-237I5, c... 40 9.1
39gb|AC171336.3| Mus musculus BAC RP24-286O17 (Roswell Park Cance... 40 9.1
40dbj|AB065918.1| Homo sapiens gene for seven transmembrane helix ... 40 9.1 
>ref|NM_197772.1| Oryza sativa (japonica cultivar-group) putative nucleic acid binding
            protein (OSJNBa0027P10.5), mRNA
          Length = 1377

 Score =  285 bits (144), Expect = 9e-74
 Identities = 285/332 (85%)
 Strand = Plus / Minus

                                                                        
Query: 332  tagtaccggtaagtggaaccgtaaccaccaagacctgaagacgaatatccactcccgtcc 391
            |||||||||||||  || || || ||||| |||||||||||||||||||||| ||| |||
Sbjct: 1376 tagtaccggtaagatgacccatatccaccgagacctgaagacgaatatccacccccatcc 1317

                                                                        
Query: 392  atgcttgaataagatggcagtgacgatgacgggtaggccgagctgccatactgcgggtag 451
            ||||| ||||| ||||||| |||||| ||||| |||| ||||||||||||||| |  |||
Sbjct: 1316 atgctagaatacgatggcaatgacgacgacggataggtcgagctgccatactgtgaatag 1257

                                                                        
Query: 452  ctggacctatataacggatctaatcctgcataactgctcctcacaggttctctgtgcgca 511
            || | ||||||||  ||||||||||||||||| |||||||| ||||  || || || || 
Sbjct: 1256 cttggcctatatactggatctaatcctgcatagctgctcctgacagaatccctatgtgcc 1197

                                                                        
Query: 512  gccagggaatcctggataagctgttgggcagattgtacctgggacgacgtcccctttatt 571
            ||||| ||||||||||| || || | ||||| |||||| || || || |||||||| |||
Sbjct: 1196 gccagagaatcctggatgagttgataggcagcttgtacttgtgatgatgtccccttcatt 1137

                                                                        
Query: 572  tcaacagttatatcatcagggcttcccaaactctcttgaattgtgacaacagcaccactg 631
            |||||||| ||||| |||||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 1136 tcaacagtaatatcgtcagggctccccaaactctcttgaattgtgacgactgcaccactg 1077

                                            
Query: 632  ttagcccgtatgtatgcaatgtttgctccttt 663
            ||||| |||||||||||||| |||||||||||
Sbjct: 1076 ttagctcgtatgtatgcaatatttgctccttt 1045
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>gb|BT018439.1| Zea mays clone EL01N0372H05.d mRNA sequence
          Length = 1397

 Score =  196 bits (99), Expect = 7e-47
 Identities = 233/278 (83%), Gaps = 6/278 (2%)
 Strand = Plus / Plus

                                                                       
Query: 392 atgcttgaataagatggcagtgacgatgacgggtaggccgagctgccatactgcgggtag 451
           ||||| ||||||||||||||||| || || || ||||  ||||||||||| || | ||||
Sbjct: 369 atgctagaataagatggcagtgatgacgaaggataggtggagctgccatattgtgagtag 428

                                                                       
Query: 452 ctggacctatataacggatctaatcctgc------ataactgctcctcacaggttctctg 505
           ||||||||||| |  | ||||||||||||      ||||||||| || |||||||||| |
Sbjct: 429 ctggacctatacagtgaatctaatcctgctcccacataactgcttctgacaggttctcgg 488

                                                                       
Query: 506 tgcgcagccagggaatcctggataagctgttgggcagattgtacctgggacgacgtcccc 565
           || |||||||  || |||||||| ||||| || |||| ||||||||| || || ||||||
Sbjct: 489 tgtgcagccaacgagtcctggatgagctgctgtgcagcttgtacctgtgaagatgtcccc 548

                                                                       
Query: 566 tttatttcaacagttatatcatcagggcttcccaaactctcttgaattgtgacaacagca 625
           |||||||||||||| |||||||| || || ||||||||||| |||||||| |||||||| 
Sbjct: 549 tttatttcaacagtaatatcatctggactacccaaactctcctgaattgtaacaacagct 608

                                                 
Query: 626 ccactgttagcccgtatgtatgcaatgtttgctccttt 663
           ||||| ||||| |||||||| ||||| |||||||||||
Sbjct: 609 ccactattagctcgtatgtacgcaatatttgctccttt 646
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>gb|AY104046.1| Zea mays PCO084385 mRNA sequence
          Length = 1747

 Score =  196 bits (99), Expect = 7e-47
 Identities = 233/278 (83%), Gaps = 6/278 (2%)
 Strand = Plus / Minus

                                                                        
Query: 392  atgcttgaataagatggcagtgacgatgacgggtaggccgagctgccatactgcgggtag 451
            ||||| ||||||||||||||||| || || || ||||  ||||||||||| || | ||||
Sbjct: 1431 atgctagaataagatggcagtgatgacgaaggataggtggagctgccatattgtgagtag 1372

                                                                        
Query: 452  ctggacctatataacggatctaatcctgc------ataactgctcctcacaggttctctg 505
            ||||||||||| |  | ||||||||||||      ||||||||| || |||||||||| |
Sbjct: 1371 ctggacctatacagtgaatctaatcctgctcccacataactgcttctgacaggttctcgg 1312

                                                                        
Query: 506  tgcgcagccagggaatcctggataagctgttgggcagattgtacctgggacgacgtcccc 565
            || |||||||  || |||||||| ||||| || |||| ||||||||| || || ||||||
Sbjct: 1311 tgtgcagccaacgagtcctggatgagctgctgtgcagcttgtacctgtgaagatgtcccc 1252

                                                                        
Query: 566  tttatttcaacagttatatcatcagggcttcccaaactctcttgaattgtgacaacagca 625
            |||||||||||||| |||||||| || || ||||||||||| |||||||| |||||||| 
Sbjct: 1251 tttatttcaacagtaatatcatctggactacccaaactctcctgaattgtaacaacagcc 1192

                                                  
Query: 626  ccactgttagcccgtatgtatgcaatgtttgctccttt 663
            ||||| ||||| |||||||| ||||| |||||||||||
Sbjct: 1191 ccactattagctcgtatgtacgcaatatttgctccttt 1154
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>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
             sequence
          Length = 141307

 Score =  147 bits (74), Expect = 5e-32
 Identities = 143/166 (86%)
 Strand = Plus / Minus

                                                                         
Query: 332   tagtaccggtaagtggaaccgtaaccaccaagacctgaagacgaatatccactcccgtcc 391
             |||||||||||||  || || || ||||| |||||||||||||||||||||| ||| |||
Sbjct: 72740 tagtaccggtaagatgacccatatccaccgagacctgaagacgaatatccacccccatcc 72681

                                                                         
Query: 392   atgcttgaataagatggcagtgacgatgacgggtaggccgagctgccatactgcgggtag 451
             ||||| ||||| ||||||| |||||| ||||| |||| ||||||||||||||| |  |||
Sbjct: 72680 atgctagaatacgatggcaatgacgacgacggataggtcgagctgccatactgtgaatag 72621

                                                           
Query: 452   ctggacctatataacggatctaatcctgcataactgctcctcacag 497
             || | ||||||||  ||||||||||||||||| |||||||| ||||
Sbjct: 72620 cttggcctatatactggatctaatcctgcatagctgctcctgacag 72575



 Score =  147 bits (74), Expect = 5e-32
 Identities = 113/126 (89%)
 Strand = Plus / Minus

                                                                         
Query: 538   ggcagattgtacctgggacgacgtcccctttatttcaacagttatatcatcagggcttcc 597
             ||||| |||||| || || || |||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 72444 ggcagcttgtacttgtgatgatgtccccttcatttcaacagtaatatcgtcagggctccc 72385

                                                                         
Query: 598   caaactctcttgaattgtgacaacagcaccactgttagcccgtatgtatgcaatgtttgc 657
             ||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||
Sbjct: 72384 caaactctcttgaattgtgacgactgcaccactgttagctcgtatgtatgcaatatttgc 72325

                   
Query: 658   tccttt 663
             ||||||
Sbjct: 72324 tccttt 72319
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  147 bits (74), Expect = 5e-32
 Identities = 143/166 (86%)
 Strand = Plus / Minus

                                                                            
Query: 332      tagtaccggtaagtggaaccgtaaccaccaagacctgaagacgaatatccactcccgtcc 391
                |||||||||||||  || || || ||||| |||||||||||||||||||||| ||| |||
Sbjct: 21758057 tagtaccggtaagatgacccatatccaccgagacctgaagacgaatatccacccccatcc 21757998

                                                                            
Query: 392      atgcttgaataagatggcagtgacgatgacgggtaggccgagctgccatactgcgggtag 451
                ||||| ||||| ||||||| |||||| ||||| |||| ||||||||||||||| |  |||
Sbjct: 21757997 atgctagaatacgatggcaatgacgacgacggataggtcgagctgccatactgtgaatag 21757938

                                                              
Query: 452      ctggacctatataacggatctaatcctgcataactgctcctcacag 497
                || | ||||||||  ||||||||||||||||| |||||||| ||||
Sbjct: 21757937 cttggcctatatactggatctaatcctgcatagctgctcctgacag 21757892



 Score =  147 bits (74), Expect = 5e-32
 Identities = 113/126 (89%)
 Strand = Plus / Minus

                                                                            
Query: 538      ggcagattgtacctgggacgacgtcccctttatttcaacagttatatcatcagggcttcc 597
                ||||| |||||| || || || |||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 21757761 ggcagcttgtacttgtgatgatgtccccttcatttcaacagtaatatcgtcagggctccc 21757702

                                                                            
Query: 598      caaactctcttgaattgtgacaacagcaccactgttagcccgtatgtatgcaatgtttgc 657
                ||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||
Sbjct: 21757701 caaactctcttgaattgtgacgactgcaccactgttagctcgtatgtatgcaatatttgc 21757642

                      
Query: 658      tccttt 663
                ||||||
Sbjct: 21757641 tccttt 21757636



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 402      aagatggcagtgacgatgacgg 423
                ||||||||||||||||||||||
Sbjct: 17870645 aagatggcagtgacgatgacgg 17870666
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  147 bits (74), Expect = 5e-32
 Identities = 143/166 (86%)
 Strand = Plus / Minus

                                                                            
Query: 332      tagtaccggtaagtggaaccgtaaccaccaagacctgaagacgaatatccactcccgtcc 391
                |||||||||||||  || || || ||||| |||||||||||||||||||||| ||| |||
Sbjct: 21769720 tagtaccggtaagatgacccatatccaccgagacctgaagacgaatatccacccccatcc 21769661

                                                                            
Query: 392      atgcttgaataagatggcagtgacgatgacgggtaggccgagctgccatactgcgggtag 451
                ||||| ||||| ||||||| |||||| ||||| |||| ||||||||||||||| |  |||
Sbjct: 21769660 atgctagaatacgatggcaatgacgacgacggataggtcgagctgccatactgtgaatag 21769601

                                                              
Query: 452      ctggacctatataacggatctaatcctgcataactgctcctcacag 497
                || | ||||||||  ||||||||||||||||| |||||||| ||||
Sbjct: 21769600 cttggcctatatactggatctaatcctgcatagctgctcctgacag 21769555



 Score =  147 bits (74), Expect = 5e-32
 Identities = 113/126 (89%)
 Strand = Plus / Minus

                                                                            
Query: 538      ggcagattgtacctgggacgacgtcccctttatttcaacagttatatcatcagggcttcc 597
                ||||| |||||| || || || |||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 21769424 ggcagcttgtacttgtgatgatgtccccttcatttcaacagtaatatcgtcagggctccc 21769365

                                                                            
Query: 598      caaactctcttgaattgtgacaacagcaccactgttagcccgtatgtatgcaatgtttgc 657
                ||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||
Sbjct: 21769364 caaactctcttgaattgtgacgactgcaccactgttagctcgtatgtatgcaatatttgc 21769305

                      
Query: 658      tccttt 663
                ||||||
Sbjct: 21769304 tccttt 21769299



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 402      aagatggcagtgacgatgacgg 423
                ||||||||||||||||||||||
Sbjct: 17879898 aagatggcagtgacgatgacgg 17879919
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>dbj|AK139061.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730011B16
            product:unclassifiable, full insert sequence
          Length = 3175

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 485  ctgctcctcacaggttctctgtg 507
            |||||||||||||||||||||||
Sbjct: 1748 ctgctcctcacaggttctctgtg 1770
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>dbj|AK015617.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930483N21 product:similar to DNAJ-LIKE
            PROTEIN [Rattus norvegicus], full insert sequence
          Length = 1614

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 485  ctgctcctcacaggttctctgtg 507
            |||||||||||||||||||||||
Sbjct: 1026 ctgctcctcacaggttctctgtg 1004
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>gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, complete sequence
          Length = 209209

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 485    ctgctcctcacaggttctctgtg 507
              |||||||||||||||||||||||
Sbjct: 150212 ctgctcctcacaggttctctgtg 150190
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>ref|NM_029144.1| Mus musculus RIKEN cDNA 4930503B20 gene (4930503B20Rik), mRNA
          Length = 1614

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 485  ctgctcctcacaggttctctgtg 507
            |||||||||||||||||||||||
Sbjct: 1026 ctgctcctcacaggttctctgtg 1004
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>ref|NM_197080.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0029C15.20), mRNA
          Length = 225

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 402 aagatggcagtgacgatgacgg 423
           ||||||||||||||||||||||
Sbjct: 146 aagatggcagtgacgatgacgg 167
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>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete
             sequence
          Length = 148816

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 402   aagatggcagtgacgatgacgg 423
             ||||||||||||||||||||||
Sbjct: 61396 aagatggcagtgacgatgacgg 61375
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>gb|AC010206.8|AC010206 Homo sapiens 12 BAC RP11-13G14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 171523

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 65     ttgcacccacagatgaacacac 86
              ||||||||||||||||||||||
Sbjct: 168283 ttgcacccacagatgaacacac 168262
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>gb|AC167171.2| Mus musculus BAC clone RP23-409H8 from chromosome 13, complete sequence
          Length = 203840

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 24    ttatactgctccttttcaccaactg 48
             |||| ||||||||||||||||||||
Sbjct: 68457 ttatgctgctccttttcaccaactg 68433
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>gb|AC124926.7| Rattus norvegicus X BAC CH230-155H3 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 217309

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   atcagtcaccacacaaaaaga 148
             |||||||||||||||||||||
Sbjct: 72575 atcagtcaccacacaaaaaga 72555
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 568    tatttcaacagttatatcatcaggg 592
              |||||||||||||||||||| ||||
Sbjct: 239710 tatttcaacagttatatcattaggg 239734
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>emb|Z93377.1|CEF13A7 Caenorhabditis elegans Cosmid F13A7, complete sequence
          Length = 31744

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   ataggcagattatcatcaaat 129
             |||||||||||||||||||||
Sbjct: 12342 ataggcagattatcatcaaat 12362
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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
              complete sequence
          Length = 156772

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    atccactcccgtccatgctt 397
              ||||||||||||||||||||
Sbjct: 145515 atccactcccgtccatgctt 145496
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>gb|AC136228.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0672D07,
             complete sequence
          Length = 136465

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   atccactcccgtccatgctt 397
             ||||||||||||||||||||
Sbjct: 13643 atccactcccgtccatgctt 13624
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 506     tgcgcagccagggaatcctg 525
               ||||||||||||||||||||
Sbjct: 2015864 tgcgcagccagggaatcctg 2015883
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>gb|AC158487.2| Capitella capitata clone JGIAUTO-1A15, complete sequence
          Length = 35955

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    aaaaacattgcacccacaga 77
             ||||||||||||||||||||
Sbjct: 32211 aaaaacattgcacccacaga 32230
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>ref|XM_749567.1| Aspergillus fumigatus Af293 t-complex protein 1, subunit zeta
            (Afu3g09590) partial mRNA
          Length = 1623

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 509  gcagccagggaatcctggat 528
            ||||||||||||||||||||
Sbjct: 1403 gcagccagggaatcctggat 1384
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>gb|AC011288.4| Homo sapiens BAC clone RP11-27B1 from 7, complete sequence
          Length = 159722

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 600   aactctcttgaattgtgaca 619
             ||||||||||||||||||||
Sbjct: 37880 aactctcttgaattgtgaca 37861
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>emb|AL929355.1|PFA929355 Plasmodium falciparum strain 3D7, chromosome 9; segment 1/5
          Length = 330050

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 570   tttcaacagttatatcatca 589
             ||||||||||||||||||||
Sbjct: 94999 tttcaacagttatatcatca 94980
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>emb|BX901956.4| Zebrafish DNA sequence from clone CH211-284C12 in linkage group 3,
              complete sequence
          Length = 197042

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    ctaccagctagtaccggtaa 343
              ||||||||||||||||||||
Sbjct: 158019 ctaccagctagtaccggtaa 158038
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>gb|AC155834.6| Mus musculus 10 BAC RP24-93K4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 164109

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 568   tatttcaacagttatatcat 587
             ||||||||||||||||||||
Sbjct: 87019 tatttcaacagttatatcat 87038
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>gb|AC020895.8| Homo sapiens chromosome 19 clone CTC-312O10, complete sequence
          Length = 139846

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 645   atgcaatgtttgctcctttg 664
             ||||||||||||||||||||
Sbjct: 67068 atgcaatgtttgctcctttg 67087
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>gb|AC153876.8| Mus musculus 10 BAC RP23-218D7 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 217077

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 587   tcagggcttcccaaactctcttga 610
             |||| |||||||||||||||||||
Sbjct: 81470 tcagagcttcccaaactctcttga 81447
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 56       tgaaaaacattgcacccacagatg 79
                ||||||||||||||||||| ||||
Sbjct: 11955173 tgaaaaacattgcacccaccgatg 11955196
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 56      tgaaaaacattgcacccaca 75
               ||||||||||||||||||||
Sbjct: 2841156 tgaaaaacattgcacccaca 2841137



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 56      tgaaaaacattgcacccaca 75
               ||||||||||||||||||||
Sbjct: 2840835 tgaaaaacattgcacccaca 2840816



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 56      tgaaaaacattgcacccaca 75
               ||||||||||||||||||||
Sbjct: 2840518 tgaaaaacattgcacccaca 2840499
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 378     atccactcccgtccatgctt 397
               ||||||||||||||||||||
Sbjct: 4259036 atccactcccgtccatgctt 4259017
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>gb|DQ217942.1| Homo sapiens EGF-like module containing mucin-like hormone
             receptor-like 1 (EMR1) gene, complete cds
          Length = 55525

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 645   atgcaatgtttgctcctttg 664
             ||||||||||||||||||||
Sbjct: 22196 atgcaatgtttgctcctttg 22215
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>gb|AC016970.16| Homo sapiens 3 BAC RP11-40M23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166966

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 600    aactctcttgaattgtgaca 619
              ||||||||||||||||||||
Sbjct: 158938 aactctcttgaattgtgaca 158957
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>emb|BX005484.7| Zebrafish DNA sequence from clone DKEY-25G12, complete sequence
          Length = 212049

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    aaatcagtcaccacacaaaa 145
              ||||||||||||||||||||
Sbjct: 138857 aaatcagtcaccacacaaaa 138876
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>dbj|AP005745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0017O03
          Length = 180651

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    tgaaaaacattgcacccaca 75
             ||||||||||||||||||||
Sbjct: 32148 tgaaaaacattgcacccaca 32129



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    tgaaaaacattgcacccaca 75
             ||||||||||||||||||||
Sbjct: 31827 tgaaaaacattgcacccaca 31808



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    tgaaaaacattgcacccaca 75
             ||||||||||||||||||||
Sbjct: 31510 tgaaaaacattgcacccaca 31491
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>emb|AL954713.11| Mouse DNA sequence from clone RP23-463K8 on chromosome 2, complete
             sequence
          Length = 171734

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 397   tgaataagatggcagtgacgatga 420
             ||||||||||||| ||||||||||
Sbjct: 90666 tgaataagatggcggtgacgatga 90689
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 56       tgaaaaacattgcacccacagatg 79
                ||||||||||||||||||| ||||
Sbjct: 11983611 tgaaaaacattgcacccaccgatg 11983634
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>emb|AL935200.9| Zebrafish DNA sequence from clone CH211-237I5, complete sequence
          Length = 160710

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   ctaccagctagtaccggtaa 343
             ||||||||||||||||||||
Sbjct: 66956 ctaccagctagtaccggtaa 66937
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>gb|AC171336.3| Mus musculus  BAC RP24-286O17 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 164528

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 568    tatttcaacagttatatcat 587
              ||||||||||||||||||||
Sbjct: 137860 tatttcaacagttatatcat 137879
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>dbj|AB065918.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds,
             isolate:CBRC7TM_481
          Length = 49228

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 645   atgcaatgtttgctcctttg 664
             ||||||||||||||||||||
Sbjct: 18499 atgcaatgtttgctcctttg 18518


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,082,105
Number of Sequences: 3902068
Number of extensions: 5082105
Number of successful extensions: 81604
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81292
Number of HSP's gapped (non-prelim): 312
length of query: 668
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 645
effective length of database: 17,143,297,704
effective search space: 11057427019080
effective search space used: 11057427019080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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