| Clone Name | rbags20c24 |
|---|---|
| Clone Library Name | barley_pub |
>PMM_ARATH (O80840) Probable phosphomannomutase (EC 5.4.2.8) (PMM)| Length = 246 Score = 313 bits (803), Expect = 2e-85 Identities = 143/177 (80%), Positives = 167/177 (94%) Frame = -1 Query: 672 AENGLVAHKDGKLIGTQSLKTYPGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMIN 493 +ENGLVAHKDGK IG QSLK + GDD+LKE INFTLHYIADLDIPIKRGTFIEFR+GM+N Sbjct: 70 SENGLVAHKDGKSIGIQSLKLHLGDDKLKELINFTLHYIADLDIPIKRGTFIEFRNGMLN 129 Query: 492 VSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWD 313 VSPIGRNCSQEERD+FE+YDKV N+RPKMV+ LRE+FAHLNLTFSIGGQISFDVFP+GWD Sbjct: 130 VSPIGRNCSQEERDEFERYDKVQNIRPKMVAELRERFAHLNLTFSIGGQISFDVFPKGWD 189 Query: 312 KTYCLRYLEEFKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSIFLS 142 KTYCL+YLE+F EIHFFGDKTY+GGND+EI+ES +T+GH+VTSP+DTV +CK++F+S Sbjct: 190 KTYCLQYLEDFSEIHFFGDKTYEGGNDYEIYESPKTIGHSVTSPDDTVAKCKALFMS 246
>PMM_SCHPO (Q9UTJ2) Phosphomannomutase (EC 5.4.2.8) (PMM)| Length = 257 Score = 240 bits (613), Expect = 2e-63 Identities = 110/177 (62%), Positives = 143/177 (80%), Gaps = 2/177 (1%) Frame = -1 Query: 672 AENGLVAHKDGKLIGTQSLKTYPGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMIN 493 AENGL A++ G+ + +QS + G+++ ++ +NF LHYIADLDIP+KRGTFIEFR+GMIN Sbjct: 79 AENGLTAYRYGQQLASQSFIAWLGEEKYQKLVNFCLHYIADLDIPVKRGTFIEFRNGMIN 138 Query: 492 VSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWD 313 +SP+GRN + EER++FE++DK +R MV VLREKF LTFSIGGQISFDVFP GWD Sbjct: 139 ISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFKDYGLTFSIGGQISFDVFPAGWD 198 Query: 312 KTYCLRYLEE--FKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSIF 148 KTYCL+++E+ F IHFFGDKTYKGGND+EIF RT+GH+VT+P+DT+ + K IF Sbjct: 199 KTYCLQHVEKEGFDTIHFFGDKTYKGGNDYEIFVDPRTIGHSVTNPDDTIAELKKIF 255
>PMM2_MOUSE (Q9Z2M7) Phosphomannomutase 2 (EC 5.4.2.8) (PMM 2)| Length = 242 Score = 224 bits (572), Expect = 1e-58 Identities = 107/176 (60%), Positives = 140/176 (79%), Gaps = 2/176 (1%) Frame = -1 Query: 669 ENGLVAHKDGKLIGTQSLKTYPGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMINV 490 ENGLVA+KDGKL+ Q+++ + G+D +++ IN+ L YIA++ +P KRGTFIEFR+GM+NV Sbjct: 66 ENGLVAYKDGKLLCKQNIQGHLGEDVIQDLINYCLSYIANIKLPKKRGTFIEFRNGMLNV 125 Query: 489 SPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDK 310 SPIGR+CSQEER +F + DK ++R K V+ LR++FA LTFSIGGQIS DVFP+GWDK Sbjct: 126 SPIGRSCSQEERIEFYELDKKEHIRQKFVADLRKEFAGKGLTFSIGGQISIDVFPEGWDK 185 Query: 309 TYCLRYLEE--FKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSIF 148 YCLR+LE +K I+FFGDKT GGNDHEIF RTVG+TVT+P DT + C+ +F Sbjct: 186 RYCLRHLEHAGYKTIYFFGDKTMPGGNDHEIFTDPRTVGYTVTAPEDTRRICEGLF 241
>PMM_CANAL (P31353) Phosphomannomutase (EC 5.4.2.8) (PMM)| Length = 252 Score = 224 bits (570), Expect = 2e-58 Identities = 100/177 (56%), Positives = 138/177 (77%), Gaps = 2/177 (1%) Frame = -1 Query: 672 AENGLVAHKDGKLIGTQSLKTYPGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMIN 493 +ENGL A+K GK + +QS + G+++ + + F L Y++D+D+PI+RGTFIEFR+GMIN Sbjct: 73 SENGLTAYKLGKELASQSFINWIGNEKYNKLVKFILRYLSDIDLPIRRGTFIEFRNGMIN 132 Query: 492 VSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWD 313 VSPIGRN S +ER+D+EK+DK H++R MV L+++F LT+SIGGQISFDVFP GWD Sbjct: 133 VSPIGRNASTQERNDYEKFDKQHHIRETMVEALKKEFPDFGLTYSIGGQISFDVFPTGWD 192 Query: 312 KTYCLRYLEE--FKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSIF 148 KTYCL+++E+ F+ IHFFGDK+YKGGND+EI+ RT+GH V SP+DT++ F Sbjct: 193 KTYCLQHVEDEHFENIHFFGDKSYKGGNDYEIYNDPRTIGHAVNSPDDTIRILNETF 249
>PMM2_MACFA (Q60HD6) Phosphomannomutase 2 (EC 5.4.2.8) (PMM 2)| Length = 246 Score = 222 bits (566), Expect = 7e-58 Identities = 106/176 (60%), Positives = 139/176 (78%), Gaps = 2/176 (1%) Frame = -1 Query: 669 ENGLVAHKDGKLIGTQSLKTYPGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMINV 490 ENGLVA+KDGKL+ Q+++++ G+ +++ IN+ L YIA + +P KRGTFIEFR+GM+NV Sbjct: 70 ENGLVAYKDGKLLCKQNIQSHLGEALIQDLINYCLSYIAKVKLPKKRGTFIEFRNGMLNV 129 Query: 489 SPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDK 310 SPIGR+CSQEER +F + DK N+R K V+ LR++FA LTFSIGGQISFDVFP GWDK Sbjct: 130 SPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDK 189 Query: 309 TYCLRYLEE--FKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSIF 148 YCLR++E +K I+FFGDKT GGNDHEIF RTVG++VT+P DT + C+ +F Sbjct: 190 RYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTVGYSVTAPEDTRRICEELF 245
>PMM2_HUMAN (O15305) Phosphomannomutase 2 (EC 5.4.2.8) (PMM 2)| Length = 246 Score = 221 bits (562), Expect = 2e-57 Identities = 105/176 (59%), Positives = 139/176 (78%), Gaps = 2/176 (1%) Frame = -1 Query: 669 ENGLVAHKDGKLIGTQSLKTYPGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMINV 490 ENGLVA+KDGKL+ Q+++++ G+ +++ IN+ L YIA + +P KRGTFIEFR+GM+NV Sbjct: 70 ENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNV 129 Query: 489 SPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDK 310 SPIGR+CSQEER +F + DK N+R K V+ LR++FA LTFSIGGQISFDVFP GWDK Sbjct: 130 SPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDK 189 Query: 309 TYCLRYLEE--FKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSIF 148 YCLR++E +K I+FFGDKT GGNDHEIF RT+G++VT+P DT + C+ +F Sbjct: 190 RYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245
>PMM_YEAST (P07283) Phosphomannomutase (EC 5.4.2.8) (PMM)| Length = 254 Score = 219 bits (557), Expect = 8e-57 Identities = 101/177 (57%), Positives = 137/177 (77%), Gaps = 2/177 (1%) Frame = -1 Query: 672 AENGLVAHKDGKLIGTQSLKTYPGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMIN 493 +ENGL A++ GK + +QS + G+++ + F L Y++++D+P +RGTF+EFR+GMIN Sbjct: 76 SENGLTAYRLGKELASQSFINWLGEEKYNKLAVFILRYLSEIDLPKRRGTFLEFRNGMIN 135 Query: 492 VSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWD 313 VSPIGRN S EER++FE+YDK H +R K V L+++F LTFSIGGQISFDVFP GWD Sbjct: 136 VSPIGRNASTEERNEFERYDKEHQIRAKFVEALKKEFPDYGLTFSIGGQISFDVFPAGWD 195 Query: 312 KTYCLRYLEE--FKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSIF 148 KTYCL+++E+ FKEIHFFGDKT GGND+EIF +RT+GH+V SP+DTV+ +F Sbjct: 196 KTYCLQHVEKDGFKEIHFFGDKTMVGGNDYEIFVDERTIGHSVQSPDDTVKILTELF 252
>PMM_DROME (Q9VTZ6) Probable phosphomannomutase (EC 5.4.2.8) (PMM)| Length = 254 Score = 219 bits (557), Expect = 8e-57 Identities = 101/169 (59%), Positives = 133/169 (78%), Gaps = 3/169 (1%) Frame = -1 Query: 669 ENGLVAHKDGKLIGTQSLKTYPGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMINV 490 ENGLV + GK +G Q++ + G++ +K FINF L Y+++LD+PIKRGTFIEFR+GM+NV Sbjct: 76 ENGLVQIEGGKEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPIKRGTFIEFRNGMMNV 135 Query: 489 SPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDK 310 PIGR C++EER+ F +YD H VR KM+ L+++FA ++LT+SIGGQISFDVFP GWDK Sbjct: 136 CPIGRQCTREERNMFAEYDIEHKVREKMIKDLKQEFADVDLTYSIGGQISFDVFPHGWDK 195 Query: 309 TYCLRYLE---EFKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDT 172 TYCLR++E +FKEIHFFGDKT GGND+EI+ RT+ H V +P DT Sbjct: 196 TYCLRHIEAHYKFKEIHFFGDKTEPGGNDYEIYSDPRTISHRVYTPKDT 244
>PMM_CAEEL (Q9XUE6) Probable phosphomannomutase (EC 5.4.2.8) (PMM)| Length = 245 Score = 210 bits (534), Expect = 4e-54 Identities = 99/175 (56%), Positives = 126/175 (72%), Gaps = 1/175 (0%) Frame = -1 Query: 672 AENGLVAHKDGKLIGTQSLKTYPGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMIN 493 +ENGL K + QS++ GD +L+E INF L Y++D+ +P+KRG F+EFR+GMIN Sbjct: 66 SENGLYGFKGTEPYPVQSIQKAIGDAKLQELINFALRYMSDIQLPVKRGNFVEFRNGMIN 125 Query: 492 VSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWD 313 +SPIGR+CSQEER F ++DK H +R K LREKF L F+IGGQIS DVFP GWD Sbjct: 126 LSPIGRSCSQEERMQFVEFDKKHGIRQKFTEQLREKFGQYGLQFAIGGQISVDVFPTGWD 185 Query: 312 KTYCLRYL-EEFKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSI 151 KT+CL+YL +F IHFFGDKT GGNDHEIF +RTVGHTV P DT + +++ Sbjct: 186 KTFCLQYLVPDFDTIHFFGDKTAPGGNDHEIFADERTVGHTVEGPEDTRKHVENV 240
>PMM1_HUMAN (Q92871) Phosphomannomutase 1 (EC 5.4.2.8) (PMM 1) (PMMH-22)| Length = 262 Score = 206 bits (524), Expect = 5e-53 Identities = 99/180 (55%), Positives = 130/180 (72%), Gaps = 2/180 (1%) Frame = -1 Query: 672 AENGLVAHKDGKLIGTQSLKTYPGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMIN 493 AENG V +K G+L+ Q+++ + G++ L++ INF L Y+A L +P KRGTFIEFR+GM+N Sbjct: 78 AENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLN 137 Query: 492 VSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWD 313 +SPIGR+C+ EER +F + DK +R K V L+ +FA L FS GG ISFDVFP+GWD Sbjct: 138 ISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWD 197 Query: 312 KTYCLRYLEE--FKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSIFLSE 139 K YCL L++ F IHFFG++T GGND EIF RTVGH+V SP DTVQ+C+ IF E Sbjct: 198 KRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPE 257
>PMM1_MOUSE (O35621) Phosphomannomutase 1 (EC 5.4.2.8) (PMM 1)| Length = 262 Score = 205 bits (521), Expect = 1e-52 Identities = 99/180 (55%), Positives = 130/180 (72%), Gaps = 2/180 (1%) Frame = -1 Query: 672 AENGLVAHKDGKLIGTQSLKTYPGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMIN 493 AENG V +K G+L+ Q+++ + G++ L++ INF L Y+A L +P KRGTFIEFR+GM+N Sbjct: 78 AENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLN 137 Query: 492 VSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWD 313 VSPIGR+C+ EER +F + DK +R K V L+ +FA L FS GG ISFDVFP+GWD Sbjct: 138 VSPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWD 197 Query: 312 KTYCLRYLEE--FKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSIFLSE 139 K YCL L+E F IHFFG++T GGND EI+ RTVGH+V SP DTVQ+C+ +F E Sbjct: 198 KRYCLDSLDEDSFDIIHFFGNETSPGGNDFEIYADPRTVGHSVVSPQDTVQRCRELFFPE 257
>PMM_BABBO (O43976) Phosphomannomutase (EC 5.4.2.8)| Length = 246 Score = 155 bits (392), Expect = 1e-37 Identities = 76/176 (43%), Positives = 108/176 (61%), Gaps = 2/176 (1%) Frame = -1 Query: 672 AENGLVAHKDGKLIGTQSLKTYPGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMIN 493 +ENG + L+ + + + +L++ + F L YIADLDIP KRGTFIE R +IN Sbjct: 67 SENGTQVYVKNVLVKSLDITEAIPETKLRKMVEFCLRYIADLDIPTKRGTFIEHRKSLIN 126 Query: 492 VSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKF--AHLNLTFSIGGQISFDVFPQG 319 + P GRNCS +R F +YD +H+VR K++ VL+ +F L+F GGQIS DV+P+ Sbjct: 127 ICPPGRNCSMVDRRRFVEYDSIHHVRQKLIQVLKSQFDSDDCPLSFVAGGQISIDVYPKA 186 Query: 318 WDKTYCLRYLEEFKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSI 151 W K+ L ++ + IHFFGD T +GGND EI+ +GHTVT D V Q + + Sbjct: 187 WSKSIALSHIGKCDVIHFFGDNTREGGNDFEIYNHPDVIGHTVTGYKDLVNQLEEL 242
>Y33B_DROME (Q9U1M2) Hypothetical protein CG32795 in chromosome 1| Length = 387 Score = 35.8 bits (81), Expect = 0.12 Identities = 18/50 (36%), Positives = 29/50 (58%) Frame = -1 Query: 567 LHYIADLDIPIKRGTFIEFRSGMINVSPIGRNCSQEERDDFEKYDKVHNV 418 LH I + +P K G +++ G +NVS + RN +DD+EK+ + NV Sbjct: 88 LHEI-EQSLPAKSGRYLQIILGDVNVSILNRNDKVRYKDDYEKFKLILNV 136
>XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte surface| antigen) (721P) (Protein XE7) Length = 695 Score = 33.1 bits (74), Expect = 0.78 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -1 Query: 447 FEKYDKVHNVRPKMVSVLREKFAHLNL-TFSIGGQISFDVFPQ 322 FEK+ ++ NV M+ RE+ N TFS GG ++F+ + Q Sbjct: 178 FEKFGEIRNVDIPMLDPYREEMTGRNFHTFSFGGHLNFEAYVQ 220
>WRK19_ARATH (Q9SZ67) Probable WRKY transcription factor 19 (WRKY DNA-binding| protein 19) Length = 1895 Score = 32.3 bits (72), Expect = 1.3 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 4/93 (4%) Frame = -1 Query: 444 EKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLE----EFK 277 EK D ++ K + K HL T ++ G IS + FP + CLR+L+ + K Sbjct: 1375 EKLDLENSRHLKNLPTSIYKLKHLE-TLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIK 1433 Query: 276 EIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPN 178 E+ +Y D +F R VT+PN Sbjct: 1434 ELP--SSISYLTALDELLFVDSRRNSPVVTNPN 1464
>EA31_LAMBD (P03753) Protein ea31| Length = 296 Score = 32.3 bits (72), Expect = 1.3 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Frame = -1 Query: 516 EFRSGMINVSPIGRNCSQEERDDFEKYDKVHNVRPKMVS---VLREKFAHLNLTFSIGGQ 346 EF IN+ P R+C+ E+ D+VH + RE++ + N G Sbjct: 131 EFSVMPINLVPSCRDCNMGEKGQVFAVDEVHQAIHPYIDKDIFFREQWVYANFVSGTPGA 190 Query: 345 ISFDV-FPQGWDKTYCLRYLEEFK 277 ISF V P W + R L FK Sbjct: 191 ISFYVECPANWRQEDKHRALHHFK 214
>YT72_CAEEL (Q11086) Hypothetical protein C01C10.2| Length = 204 Score = 29.6 bits (65), Expect = 8.7 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 26/109 (23%) Frame = -1 Query: 375 LNLTFSIGGQISFDVFPQ--------GWDKT------YCLRYLEEFKEIHFFGDKTY--- 247 LNLTFS +IS DVF Q W + Y + Y+++ E+ F D + Sbjct: 13 LNLTFSPKSEISEDVFKQMFSSLDRLWWSRLVISIRGYVINYVQQNDEVLFSCDDAFIKI 72 Query: 246 ------KGGNDHEIFESDRTVGHTVTSPNDTVQQC---KSIFLSE*SPD 127 + + FE + H + N +Q KSI ++ SP+ Sbjct: 73 HQKLAERNSQFEDAFEYLTAIFHVIREKNTLIQMISNPKSISTTKISPN 121 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 106,184,148 Number of Sequences: 219361 Number of extensions: 2342149 Number of successful extensions: 6026 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 5829 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6015 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)