ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20c22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1COMT1_CAPCH (O81646) Caffeic acid 3-O-methyltransferase (EC 2.1.... 30 6.2
2COMT1_CAPAN (Q9FQY8) Caffeic acid 3-O-methyltransferase (EC 2.1.... 30 6.2

>COMT1_CAPCH (O81646) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase) (COMT) (CAOMT)
          Length = 359

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 324 KLMFESVYHRTDTQFKGSYTLYQACDITLLIYHNTD 431
           K++ ES YH TD    G     +A  +T   YH TD
Sbjct: 130 KVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTD 165



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>COMT1_CAPAN (Q9FQY8) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase) (COMT) (CAOMT)
          Length = 359

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 324 KLMFESVYHRTDTQFKGSYTLYQACDITLLIYHNTD 431
           K++ ES YH TD    G     +A  +T   YH TD
Sbjct: 130 KVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTD 165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,640,477
Number of Sequences: 219361
Number of extensions: 2227203
Number of successful extensions: 5409
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5408
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7932903580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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